Displaying publications 1 - 20 of 33 in total

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  1. Shahid SK
    Ann Trop Med Parasitol, 2008 Jan;102(1):63-71.
    PMID: 18186979 DOI: 10.1179/136485908X252151
    Multidrug-resistant organisms cause late-onset ventilator-associated pneumonia (VAP). In a pilot, randomized and controlled study, the efficacy and safety of cefepime, in late-onset VAP in infants, have now been evaluated in Malaysia. Thirty children aged <1 year with late-onset VAP (i.e. VAP occurring 5 or more days after intubation) were randomized to receive cefepime or, as a control, ceftazidime. The clinical responses and the microbiological clearance of tracheal aspirates were evaluated in each arm. Adverse events, if any, were monitored clinically and by blood tests. Ten of the 15 children given cefepime and five of the 15 given ceftazidime showed a satisfactory clinical response (P<0.1). Cefepime appeared significantly better at clearing polymicrobial infections from tracheal aspirates. There were no fatalities in the cefepime arm but three in ceftazidime (P<0.1). The mean (S.E.) durations of antibiotic use were 9.4 (1.5) days for cefepime and 7.6 (1.0) days for ceftazidime (P>0.05). No serious adverse effects were observed in either arm. In conclusion, in late-onset VAP in infants, cefepime monotherapy appears to be at least as effective and safe as ceftazidime monotherapy, with better microbiological clearance.
  2. Mahesar RA, Shahid S, Asif S, Khoso AK, Kar SK, Shabbir T
    CNS Spectr, 2023 Oct 20.
    PMID: 37861078 DOI: 10.1017/S1092852923006351
    Numerous studies have been conducted globally to assess the compliance level of newspapers with the World Health Organization's media guidelines for responsible suicide reporting. To identify and review such studies conducted in Muslim-majority countries between 2014 and 2022, we searched PubMed and Google Scholar databases. We identified 12 eligible studies from Pakistan (n = 4), Bangladesh (n = 2), Malaysia (n = 1), Indonesia (n = 1), Iraq (n = 1), Iran (n = 1), Nigeria (n = 1), and Egypt (n = 1). These studies indicated an overall lack of adherence to the guidelines. However, the level of nonadherence was particularly high in Pakistan. Effective suicide prevention programs may help in promoting responsible reporting of suicide.
  3. Bhagat SK, Pyrgaki K, Salih SQ, Tiyasha T, Beyaztas U, Shahid S, et al.
    Chemosphere, 2021 Aug;276:130162.
    PMID: 34088083 DOI: 10.1016/j.chemosphere.2021.130162
    Copper (Cu) ion in wastewater is considered as one of the crucial hazardous elements to be quantified. This research is established to predict copper ions adsorption (Ad) by Attapulgite clay from aqueous solutions using computer-aided models. Three artificial intelligent (AI) models are developed for this purpose including Grid optimization-based random forest (Grid-RF), artificial neural network (ANN) and support vector machine (SVM). Principal component analysis (PCA) is used to select model inputs from different variables including the initial concentration of Cu (IC), the dosage of Attapulgite clay (Dose), contact time (CT), pH, and addition of NaNO3 (SN). The ANN model is found to predict Ad with minimum root mean square error (RMSE = 0.9283) and maximum coefficient of determination (R2 = 0.9974) when all the variables (i.e., IC, Dose, CT, pH, SN) were considered as input. The prediction accuracy of Grid-RF model is found similar to ANN model when a few numbers of predictors are used. According to prediction accuracy, the models can be arranged as ANN-M5> Grid-RF-M5> Grid-RF-M4> ANN-M4> SVM-M4> SVM-M5. Overall, the applied statistical analysis of the results indicates that ANN and Grid-RF models can be employed as a computer-aided model for monitoring and simulating the adsorption from aqueous solutions by Attapulgite clay.
  4. Tao H, Jawad AH, Shather AH, Al-Khafaji Z, Rashid TA, Ali M, et al.
    Environ Int, 2023 May;175:107931.
    PMID: 37119651 DOI: 10.1016/j.envint.2023.107931
    This study uses machine learning (ML) models for a high-resolution prediction (0.1°×0.1°) of air fine particular matter (PM2.5) concentration, the most harmful to human health, from meteorological and soil data. Iraq was considered the study area to implement the method. Different lags and the changing patterns of four European Reanalysis (ERA5) meteorological variables, rainfall, mean temperature, wind speed and relative humidity, and one soil parameter, the soil moisture, were used to select the suitable set of predictors using a non-greedy algorithm known as simulated annealing (SA). The selected predictors were used to simulate the temporal and spatial variability of air PM2.5 concentration over Iraq during the early summer (May-July), the most polluted months, using three advanced ML models, extremely randomized trees (ERT), stochastic gradient descent backpropagation (SGD-BP) and long short-term memory (LSTM) integrated with Bayesian optimizer. The spatial distribution of the annual average PM2.5 revealed the population of the whole of Iraq is exposed to a pollution level above the standard limit. The changes in temperature and soil moisture and the mean wind speed and humidity of the month before the early summer can predict the temporal and spatial variability of PM2.5 over Iraq during May-July. Results revealed the higher performance of LSTM with normalized root-mean-square error and Kling-Gupta efficiency of 13.4% and 0.89, compared to 16.02% and 0.81 for SDG-BP and 17.9% and 0.74 for ERT. The LSTM could also reconstruct the observed spatial distribution of PM2.5 with MapCurve and Cramer's V values of 0.95 and 0.91, compared to 0.9 and 0.86 for SGD-BP and 0.83 and 0.76 for ERT. The study provided a methodology for forecasting spatial variability of PM2.5 concentration at high resolution during the peak pollution months from freely available data, which can be replicated in other regions for generating high-resolution PM2.5 forecasting maps.
  5. Al-Abadi AM, Pradhan B, Shahid S
    Environ Monit Assess, 2015 Oct;188(10):549.
    PMID: 27600115 DOI: 10.1007/s10661-016-5564-0
    The objective of this study is to delineate groundwater flowing well zone potential in An-Najif Province of Iraq in a data-driven evidential belief function model developed in a geographical information system (GIS) environment. An inventory map of 68 groundwater flowing wells was prepared through field survey. Seventy percent or 43 wells were used for training the evidential belief functions model and the reset 30 % or 19 wells were used for validation of the model. Seven groundwater conditioning factors mostly derived from RS were used, namely elevation, slope angle, curvature, topographic wetness index, stream power index, lithological units, and distance to the Euphrates River in this study. The relationship between training flowing well locations and the conditioning factors were investigated using evidential belief functions technique in a GIS environment. The integrated belief values were classified into five categories using natural break classification scheme to predict spatial zoning of groundwater flowing well, namely very low (0.17-0.34), low (0.34-0.46), moderate (0.46-0.58), high (0.58-0.80), and very high (0.80-0.99). The results show that very low and low zones cover 72 % (19,282 km(2)) of the study area mostly clustered in the central part, the moderate zone concentrated in the west part covers 13 % (3481 km(2)), and the high and very high zones extended over the northern part cover 15 % (3977 km(2)) of the study area. The vast spatial extension of very low and low zones indicates that groundwater flowing wells potential in the study area is low. The performance of the evidential belief functions spatial model was validated using the receiver operating characteristic curve. A success rate of 0.95 and a prediction rate of 0.94 were estimated from the area under relative operating characteristics curves, which indicate that the developed model has excellent capability to predict groundwater flowing well zones. The produced map of groundwater flowing well zones could be used to identify new wells and manage groundwater storage in a sustainable manner.
  6. Tao H, Bobaker AM, Ramal MM, Yaseen ZM, Hossain MS, Shahid S
    Environ Sci Pollut Res Int, 2019 Jan;26(1):923-937.
    PMID: 30421367 DOI: 10.1007/s11356-018-3663-x
    Surface and ground water resources are highly sensitive aquatic systems to contaminants due to their accessibility to multiple-point and non-point sources of pollutions. Determination of water quality variables using mathematical models instead of laboratory experiments can have venerable significance in term of the environmental prospective. In this research, application of a new developed hybrid response surface method (HRSM) which is a modified model of the existing response surface model (RSM) is proposed for the first time to predict biochemical oxygen demand (BOD) and dissolved oxygen (DO) in Euphrates River, Iraq. The model was constructed using various physical and chemical variables including water temperature (T), turbidity, power of hydrogen (pH), electrical conductivity (EC), alkalinity, calcium (Ca), chemical oxygen demand (COD), sulfate (SO4), total dissolved solids (TDS), and total suspended solids (TSS) as input attributes. The monthly water quality sampling data for the period 2004-2013 was considered for structuring the input-output pattern required for the development of the models. An advance analysis was conducted to comprehend the correlation between the predictors and predictand. The prediction performances of HRSM were compared with that of support vector regression (SVR) model which is one of the most predominate applied machine learning approaches of the state-of-the-art for water quality prediction. The results indicated a very optimistic modeling accuracy of the proposed HRSM model to predict BOD and DO. Furthermore, the results showed a robust alternative mathematical model for determining water quality particularly in a data scarce region like Iraq.
  7. Malik A, Tikhamarine Y, Sammen SS, Abba SI, Shahid S
    PMID: 33751346 DOI: 10.1007/s11356-021-13445-0
    Drought is considered one of the costliest natural disasters that result in water scarcity and crop damage almost every year. Drought monitoring and forecasting are essential for the efficient management of water resources and sustainability in agriculture. However, the design of a consistent drought prediction model based on the dynamic relationship of the drought index with its antecedent values remains a challenging task. In the present research, the SVR (support vector regression) model was hybridized with two different optimization algorithms namely; Particle Swarm Optimization (PSO) and Harris Hawks Optimization (HHO) for reliable prediction of effective drought index (EDI) 1 month ahead, at different locations of Uttarakhand State of India. The inputs of the models were selected through partial autocorrelation function (PACF) analysis. The output produced by the SVR-HHO and SVR-PSO models was compared with the EDI estimated from observed data using five statistical indicators, i.e., RMSE (Root Mean Square Error), MAE (Mean Absolute Error), COC (Coefficient of Correlation), NSE (Nash-Sutcliffe Efficiency), WI (Willmott Index), and graphical inspection of radar-chart, time-variation plot, box-whisker plot, and Taylor diagram. Appraisal of results indicates that the SVR-HHO model (RMSE = 0.535-0.965, MAE = 0.363-0.622, NSE = 0.558-0.860, COC = 0.760-0.930, and WI = 0.862-0.959) outperformed the SVR-PSO model (RMSE = 0.546-0.967, MAE = 0.372-0.625, NSE = 0.556-0.855, COC = 0.758-0.929, and WI = 0.861-0.956) in predicting EDI. Visual inspection of model performances also showed a better performance of SVR-HHO compared to SVR-PSO in replicating the median, inter-quartile range, spread, and pattern of the EDI estimated from observed rainfall. The results indicate that the hybrid SVR-HHO approach can be utilized for reliable EDI predictions in the study area.
  8. Fu M, Le C, Fan T, Prakapovich R, Manko D, Dmytrenko O, et al.
    Environ Sci Pollut Res Int, 2021 Dec;28(45):64818-64829.
    PMID: 34318419 DOI: 10.1007/s11356-021-15574-y
    The atmospheric particulate matter (PM) with a diameter of 2.5 μm or less (PM2.5) is one of the key indicators of air pollutants. Accurate prediction of PM2.5 concentration is very important for air pollution monitoring and public health management. However, the presence of noise in PM2.5 data series is a major challenge of its accurate prediction. A novel hybrid PM2.5 concentration prediction model is proposed in this study by combining complete ensemble empirical mode decomposition (CEEMD) method, Pearson's correlation analysis, and a deep long short-term memory (LSTM) method. CEEMD was employed to decompose historical PM2.5 concentration data to different frequencies in order to enhance the timing characteristics of data. Pearson's correlation was used to screen the different frequency intrinsic-mode functions of decomposed data. Finally, the filtered enhancement data were inputted to a deep LSTM network with multiple hidden layers for training and prediction. The results evidenced the potential of the CEEMD-LSTM hybrid model with a prediction accuracy of approximately 80% and model convergence after 700 training epochs. The secondary screening of Pearson's correlation test improved the model (CEEMD-Pearson) accuracy up to 87% but model convergence after 800 epochs. The hybrid model combining CEEMD-Pearson with the deep LSTM neural network showed a prediction accuracy of nearly 90% and model convergence after 650 interactions. The results provide a clear indication of higher prediction accuracy of PM2.5 with less computation time through hybridization of CEEMD-Pearson with deep LSTM models and its potential to be employed for air pollution monitoring.
  9. Alavi J, Ewees AA, Ansari S, Shahid S, Yaseen ZM
    PMID: 34741267 DOI: 10.1007/s11356-021-17190-2
    Accurate prediction of inlet chemical oxygen demand (COD) is vital for better planning and management of wastewater treatment plants. The COD values at the inlet follow a complex nonstationary pattern, making its prediction challenging. This study compared the performance of several novel machine learning models developed through hybridizing kernel-based extreme learning machines (KELMs) with intelligent optimization algorithms for the reliable prediction of real-time COD values. The combined time-series learning method and consumer behaviours, estimated from water-use data (hour/day), were used as the supplementary inputs of the hybrid KELM models. Comparison of model performances for different input combinations revealed the best performance using up to 2-day lag values of COD with the other wastewater properties. The results also showed the best performance of the KELM-salp swarm algorithm (SSA) model among all the hybrid models with a minimum root mean square error of 0.058 and mean absolute error of 0.044.
  10. Hamed MM, Nashwan MS, Shahid S, Ismail TB, Dewan A, Asaduzzaman M
    Environ Sci Pollut Res Int, 2022 Dec;29(60):91212-91231.
    PMID: 35881284 DOI: 10.1007/s11356-022-22036-6
    Mapping potential changes in bioclimatic characteristics are critical for planning mitigation goals and climate change adaptation. Assessment of such changes is particularly important for Southeast Asia (SEA) - home to global largest ecological diversity. Twenty-three global climate models (GCMs) of Coupled Model Intercomparison Project Phase 6 (CMIP6) were used in this study to evaluate changes in 11 thermal bioclimatic indicators over SEA for two shared socioeconomic pathways (SSPs), 2-4.5 and 5-8.5. Spatial changes in the ensemble mean, 5th, and 95th percentile of each indicator for near (2020-2059) and far (2060-2099) periods were examined in order to understand temporal changes and associated uncertainty. The results indicated large spatial heterogeneity and temporal variability in projected changes of bioclimatic indicators. A higher change was projected for mainland SEA in the far future and less in maritime region during the near future. At the same time, uncertainty in the projected bioclimatic indices was higher for mainland than maritime SEA. Analysis of mean multi-model ensemble revealed a change in mean temperature ranged from - 0.71 to 3.23 °C in near and from 0.00 to 4.07 °C in far futures. The diurnal temperature range was projected to reduce over most of SEA (ranging from - 1.1 to - 2.0 °C), while isothermality is likely to decrease from - 1.1 to - 4.6%. A decrease in isothermality along with narrowing of seasonality indicated a possible shift in climate, particularly in the north of mainland SEA. Maximum temperature in the warmest month/quarter was projected to increase a little more than the coldest month/quarter and the mean temperature in the driest month to increase more than the wettest month. This would cause an increase in the annual temperature range in the future.
  11. Hamed MM, Salehie O, Nashwan MS, Shahid S
    Environ Sci Pollut Res Int, 2023 Mar;30(13):38063-38075.
    PMID: 36576621 DOI: 10.1007/s11356-022-24985-4
    Global warming has amplified the frequency of temperature extremes, especially in hot dry countries, which could have serious consequences for the natural and built environments. Egypt is one of the hot desert climate regions that are more susceptible to climate change and associated hazards. This study attempted to project the changes in temperature extremes for three Shared Socioeconomic Pathways (SSPs), namely, SSP1-2.6, SSP2-4.5, and SSP5-8.5 and two future periods (early future: 2020-2059 and late future: 2060-2099) by using daily maximum (Tmax) and minimum temperature (Tmin) of general circulation model (GCMs) of Coupled Model Inter-comparison Project phase 6 (CMIP6). The findings showed that most temperature extreme indices would increase especially by the end of the century. In the late future, the change in the mean Tmin (4.3 °C) was projected to be higher than the mean Tmax (3.7 °C). Annual maximum Tmax, temperature above 95th percentile of Tmax, and the number of hot days above 40 °C and 45 °C were projected to increase in the range 3.0‒5.4 °C, 1.5‒4.8 °C, 20‒95 days, and 10‒52 days, respectively. In contrast, the annual minimum of Tmin, temperature below the 5th percentile, and the annual percentage of cold nights were projected to change in the range of 2.95‒5.0 °C, 1.4‒3.6 °C, and - 0.1‒0.1%, respectively. In all the cases, the lowest changes would be for SSP1-2.6 in the early period and the greatest changes for SSP5-8.5 in the late period. The study indicates that the country is likely to experience a rise in hot extremes and a decline in cold extremes. Therefore, Egypt should take long-term adaptation plans to build social resiliency to rising hot extremes.
  12. Tanimu B, Hamed MM, Bello AD, Abdullahi SA, Ajibike MA, Shahid S
    Environ Sci Pollut Res Int, 2024 Feb;31(10):15986-16010.
    PMID: 38308777 DOI: 10.1007/s11356-024-32128-0
    Choosing a suitable gridded climate dataset is a significant challenge in hydro-climatic research, particularly in areas lacking long-term, reliable, and dense records. This study used the most common method (Perkins skill score (PSS)) with two advanced time series similarity algorithms, short time series distance (STS), and cross-correlation distance (CCD), for the first time to evaluate, compare, and rank five gridded climate datasets, namely, Climate Research Unit (CRU), TERRA Climate (TERRA), Climate Prediction Center (CPC), European Reanalysis V.5 (ERA5), and Climatologies at high resolution for Earth's land surface areas (CHELSA), according to their ability to replicate the in situ rainfall and temperature data in Nigeria. The performance of the methods was evaluated by comparing the ranking obtained using compromise programming (CP) based on four statistical criteria in replicating in situ rainfall, maximum temperature, and minimum temperature at 26 locations distributed over Nigeria. Both methods identified CRU as Nigeria's best-gridded climate dataset, followed by CHELSA, TERRA, ERA5, and CPC. The integrated STS values using the group decision-making method for CRU rainfall, maximum and minimum temperatures were 17, 10.1, and 20.8, respectively, while CDD values for those variables were 17.7, 11, and 12.2, respectively. The CP based on conventional statistical metrics supported the results obtained using STS and CCD. CRU's Pbias was between 0.5 and 1; KGE ranged from 0.5 to 0.9; NSE ranged from 0.3 to 0.8; and NRMSE between - 30 and 68.2, which were much better than the other products. The findings establish STS and CCD's ability to evaluate the performance of climate data by avoiding the complex and time-consuming multi-criteria decision algorithms based on multiple statistical metrics.
  13. Pham QB, Sammen SS, Abba SI, Mohammadi B, Shahid S, Abdulkadir RA
    PMID: 33625698 DOI: 10.1007/s11356-021-12792-2
    Precise monitoring of cyanobacteria concentration in water resources is a daunting task. The development of reliable tools to monitor this contamination is an important research topic in water resources management. Indirect methods such as chlorophyll-a determination, cell counting, and toxin measurement of the cyanobacteria are tedious, cumbersome, and often lead to inaccurate results. The quantity of phycocyanin (PC) pigment is considered more appropriate for cyanobacteria monitoring. Traditional approaches for PC estimation are time-consuming, expensive, and require high expertise. Recently, some studies have proposed the application of artificial intelligence (AI) techniques to predict the amount of PC concentration. Nonetheless, most of these researches are limited to standalone modeling schemas such as artificial neural network (ANN), multilayer perceptron (MLP), and support vector machine (SVM). The independent schema provides imprecise results when faced with highly nonlinear systems and data uncertainties resulting from environmental disturbances. To alleviate the limitations of the existing models, this study proposes the first application of a hybrid AI model that integrates the potentials of relevance vector machine (RVM) and flower pollination algorithm (RVM-FPA) to predict the PC concentration in water resources. The performance of the hybrid model is compared with the standalone RVM model. The prediction performance of the proposed models was evaluated at two stations (stations 508 and 478) using different statistical and graphical performance evaluation methods. The results showed that the hybrid models exhibited higher performance at both stations compared to the standalone RVM model. The proposed hybrid RVM-FPA can therefore serve as a reliable predictive tool for PC concentration in water resources.
  14. Kamruzzaman M, Wahid S, Shahid S, Alam E, Mainuddin M, Islam HMT, et al.
    Heliyon, 2023 May;9(5):e16274.
    PMID: 37234666 DOI: 10.1016/j.heliyon.2023.e16274
    Understanding spatiotemporal variability in precipitation and temperature and their future projections is critical for assessing environmental hazards and planning long-term mitigation and adaptation. In this study, 18 Global Climate Models (GCMs) from the most recent Coupled Model Intercomparison Project phase 6 (CMIP6) were employed to project the mean annual, seasonal, and monthly precipitation, maximum air temperature (Tmax), and minimum air temperature (Tmin) in Bangladesh. The GCM projections were bias-corrected using the Simple Quantile Mapping (SQM) technique. Using the Multi-Model Ensemble (MME) mean of the bias-corrected dataset, the expected changes for the four Shared Socioeconomic Pathways (SSP1-2.6, SSP2-4.5, SSP3-7.0, and SSP5-8.5) were evaluated for the near (2015-2044), mid (2045-2074), and far (2075-2100) futures in comparison to the historical period (1985-2014). In the far future, the anticipated average annual precipitation increased by 9.48%, 13.63%, 21.07%, and 30.90%, while the average Tmax (Tmin) rose by 1.09 (1.17), 1.60 (1.91), 2.12 (2.80), and 2.99 (3.69) °C for SSP1-2.6, SSP2-4.5, SSP3-7.0, and SSP5-8.5, respectively. According to predictions for the SSP5-8.5 scenario in the distant future, there is expected to be a substantial rise in precipitation (41.98%) during the post-monsoon season. In contrast, winter precipitation was predicted to decrease most (11.12%) in the mid-future for SSP3-7.0, while to increase most (15.62%) in the far-future for SSP1-2.6. Tmax (Tmin) was predicted to rise most in the winter and least in the monsoon for all periods and scenarios. Tmin increased more rapidly than Tmax in all seasons for all SSPs. The projected changes could lead to more frequent and severe flooding, landslides, and negative impacts on human health, agriculture, and ecosystems. The study highlights the need for localized and context-specific adaptation strategies as different regions of Bangladesh will be affected differently by these changes.
  15. Rahimi ST, Safari Z, Shahid S, Hayet Khan MM, Ali Z, Ziarh GF, et al.
    Heliyon, 2024 Apr 15;10(7):e28433.
    PMID: 38571592 DOI: 10.1016/j.heliyon.2024.e28433
    Global warming induces spatially heterogeneous changes in precipitation patterns, highlighting the need to assess these changes at regional scales. This assessment is particularly critical for Afghanistan, where agriculture serves as the primary livelihood for the population. New global climate model (GCM) simulations have recently been released for the recently established shared socioeconomic pathways (SSPs). This requires evaluating projected precipitation changes under these new scenarios and subsequent policy updates. This research employed six GCMs from the CMIP6 to project spatial and temporal precipitation changes across Afghanistan under all SSPs, including SSP1-1.9, SSP1-2.6, SSP2-4.5, SSP3-7.0, and SSP5-8.5. The employed GCMs were bias-corrected using the Global Precipitation Climatological Center's (GPCC) monthly gridded precipitation data with a 1.0° spatial resolution. Subsequently, the climate change factor was calculated to assess precipitation changes for both the near future (2020-2059) and the distant future (2060-2099). The bias-corrected projections' multi-model ensemble (MME) revealed increased precipitation across most of Afghanistan for SSPs with higher emissions scenarios. The bias-corrected simulations showed a substantial increase in summer precipitation of around 50%, projected under SSP1-1.9 in the southwestern region, while a decline of over 50% is projected in the northwestern region until 2100. The annual precipitation in the northwest region was projected to increase up to 15% for SSP1-2.6. SSP2-4.5 showed a projected annual precipitation increase of around 20% in the southwestern and certain eastern regions in the far future. Furthermore, a substantial rise of approximately 50% in summer precipitation under SSP3-7.0 is expected in the central and western regions in the far future. However, it is crucial to note that the projected changes exhibit considerable uncertainty among different GCMs.
  16. Hussein H, Mustafa R, Quek KF, Hassanudin NS, Shahid S
    Int J Rheum Dis, 2008;11(3):237-240.
    DOI: 10.1111/j.1756-185X.2008.00384.x
    Objective: To validate the Malay version of the Health Assessment Questionnaire (Malay-HAQ) for use in Malay-speaking rheumatoid arthritis (RA) patients in the Malaysian setting. The HAQ - Disability Index has been validated in several languages, but not in Malay.Methods: The original HAQ was modified and translated into Malay by two translators, one of whom was aware of the objectives of the Questionnaire and the other as a lay translator. Two sets of Malay-HAQ were distributed to RA patients during their routine follow-up visits; one set to be completed immediately and another set to be completed 2 weeks later. A total of 61 patients completed the two sets of Malay-HAQ. The data collected was analysed using SPSS V. 11.0. Reliability of the data was evaluated using the test-retest method and internal consistency was assessed by Cronbach's alpha.Results: The study showed that the Malay-HAQ is feasible and reliable. The Spearman's correlation coefficient ranged from 0.65 to 0.82, while the internal consistency was 0.88-0.92.Conclusion: The Malay-HAQ is a sensitive, reliable and valid instrument for the measurement of functional status in RA patients in a Malay setting. © 2008 Asia Pacific League of Associations for Rheumatology.
  17. Hashim BM, Al-Naseri SK, Hamadi AM, Mahmood TA, Halder B, Shahid S, et al.
    Int J Disaster Risk Reduct, 2023 Aug;94:103799.
    PMID: 37360250 DOI: 10.1016/j.ijdrr.2023.103799
    The COVID-19 pandemic was a serious global health emergency in 2020 and 2021. This study analyzed the seasonal association of weekly averages of meteorological parameters, such as wind speed, solar radiation, temperature, relative humidity, and air pollutant PM2.5, with confirmed COVID-19 cases and deaths in Baghdad, Iraq, a major megacity of the Middle East, for the period June 2020 to August 2021. Spearman and Kendall correlation coefficients were used to investigate the association. The results showed that wind speed, air temperature, and solar radiation have positive and strong correlations with the confirmed cases and deaths in the cold season (autumn and winter 2020-2021). The total COVID-19 cases negatively correlated with relative humidity but were not significant in all seasons. Besides, PM2.5 strongly correlated with COVID-19 confirmed cases for the summer of 2020. The death distribution by age group showed the highest deaths for those aged 60-69. The highest number of deaths was 41% in the summer of 2020. The study provided useful information about the COVID-19 health emergency and meteorological parameters, which can be used for future health disaster planning, adopting prevention strategies and providing healthcare procedures to protect against future infraction transmission.
  18. Nisar H, Attique SA, Javaid A, Ain QU, Butt F, Zaid M, et al.
    J Biomol Struct Dyn, 2023;41(22):13302-13313.
    PMID: 36715128 DOI: 10.1080/07391102.2023.2173299
    Interleukin 17 F is a member of IL-17 cytokine family with a 50% structural homology to IL-17A and plays a significant role either alone or in combination with IL-17A towards inflammation in Rheumatoid arthritis (RA). A growing number of drugs targeting IL-17 pathway are being tested against population specific disease markers. The major objective of this research was to investigate the anti-inflammatory effect of Anakinra (an IL-1 R1 inhibitor) and Ustekinumab (an IL-12 and IL-23 inhibitor) by targeting IL17F. The three dimensional structures of IL17F was taken from PDB while structures of drugs were taken from PubChem database. Docking was performed using MOE and Schrodinger ligand docking software and binding energies, including s-score using London-dG fitness function and glide score using glide internal energy function, between drug and targets were compared. Furthermore, Protein-Drug complex were subjected to 150 ns Molecular Dynamics (MD) Simulations using Schrodinger's Desmond Module. Docking and MD simulation results suggest anakinra as a more potent IL17F inhibitor and forming a more structurally stable complex.Communicated by Ramaswamy H. Sarma.
  19. Islam ARMT, Islam HMT, Shahid S, Khatun MK, Ali MM, Rahman MS, et al.
    J Environ Manage, 2021 Jul 01;289:112505.
    PMID: 33819656 DOI: 10.1016/j.jenvman.2021.112505
    Climate extremes have a significant impact on vegetation. However, little is known about vegetation response to climatic extremes in Bangladesh. The association of Normalized Difference Vegetation Index (NDVI) with nine extreme precipitation and temperature indices was evaluated to identify the nexus between vegetation and climatic extremes and their associations in Bangladesh for the period 1986-2017. Moreover, detrended fluctuation analysis (DFA) and Morlet wavelet analysis (MWA) were employed to evaluate the possible future trends and decipher the existing periodic cycles, respectively in the time series of NDVI and climate extremes. Besides, atmospheric variables of ECMWF ERA5 were used to examine the casual circulation mechanism responsible for climatic extremes of Bangladesh. The results revealed that the monthly NDVI is positively associated with extreme rainfall with spatiotemporal heterogeneity. Warm temperature indices showed a significant negative association with NDVI on the seasonal scale, while precipitation and cold temperature extremes showed a positive association with yearly NDVI. The DEA revealed a continuous increase in temperature extreme in the future, while no change in precipitation extremes. NDVI also revealed a significant association with extreme temperature indices with a time lag of one month and with precipitation extreme without time lag. Spatial analysis indicated insensitivity of marshy vegetation type to climate extremes in winter. The study revealed that elevated summer geopotential height, no visible anticyclonic center, reduced high cloud cover, and low solar radiation with higher humidity contributed to climatic extremes in Bangladesh. The nexus between NDVI and climatic extremes established in this study indicated that increasing warm temperature extremes due to global warming might have severe implications on Bangladesh's ecology and the environment in the future.
  20. Islam MS, Phoungthong K, Ismail Z, Othman IK, Shahid S, Ishak DSM, et al.
    PMID: 36644961 DOI: 10.1080/10934529.2022.2148811
    The spreading of sewage sludge from wastewater treatment plants and various industries arouses the growing interest due to the contamination by trace elements. Sludges were collected from one sewage treatment plant and two industries in Dhaka City, Bangladesh to assess physicochemical parameters and total and fraction content of trace elements like Cr, Ni, Cu, As, Cd, Pb, Fe, Mn and Zn in sludges. We evaluated the bioavailability of theses metals by determining their speciation by sequential extraction, each metal being distributed among five fractions: exchangeable fraction, bound to carbonate fraction, Fe-Mn oxide bound fraction, organic matter bound fraction and residual fractions. We found that all the analyzed sludges had satisfactory properties from an agronomic quality point of view. The average concentration (mg/kg) of trace metals in sludge samples were in the following decreasing order Fe (12807) > Cr (200) > Mn (158) > Zn (132) > Cu (68.2) > Ni (42.5) > Pb (36.4) > As (35.1) > Cd (3.7). The results of the sequential extraction showed that Cr, Ni, Cu, Fe and Mn were largely associated with the residual fraction where As, Cd and Pb was dominantly associated with the exchangeable and carbonate bound fractions and Zn showed a considerable proportion in carbonate bound fraction. These results showed that regulations must take into account the bioavailability with regard to the characteristics of the agricultural soils on which sludge will be spread.
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