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Calibration improves the agreement in grading oral epithelial dysplasia-Findings from a National Workshop in Malaysia

Kallarakkal TG, Zaini ZM, Ghani WMN, Karen-Ng LP, Siriwardena BSMS, Cheong SC, et al.

J Oral Pathol Med, 2024 Jan;53(1):53-60.
PMID: 38081145 DOI: 10.1111/jop.13501

INTRODUCTION: A major pitfall of many of the established oral epithelial dysplasia (OED) grading criteria is their lack of reproducibility and accuracy to predict malignant transformation. The main objective of this study was to determine whether calibration of practicing oral pathologists on OED grading could improve the reproducibility of the WHO 2017 and the binary OED grading systems.
METHODS: A nationwide online exercise was carried out to determine the influence of calibration on the reproducibility of the WHO 2017 and the binary OED grading systems.
RESULTS: A significant improvement was observed in the inter-observer agreement for the WHO 2017 OED grading system (K 0.196 vs. 0.448; Kw 0.357 vs. 0.562) after the calibration exercise. The significant difference (p = 0.027) in the level of agreement between those with five or more years and less than 5 years of experience was no more observed (p = 0.426) after the calibration exercise. The percent agreement for binary grading was significantly higher (91.8%) for buccal mucosal lesions as compared to lesions on the tongue after the calibration exercise.
CONCLUSION: This study validates the significance of calibration in improving the reproducibility of OED grading. The nationwide exercise resulted in a statistically significant improvement in the inter-observer agreement for the WHO 2017 OED grading system among a large number of oral pathologists. It is highly recommended that similar exercises should be organized periodically by professional bodies responsible for continuing education among oral pathologists to improve the reliability of OED grading for optimal treatment of oral potentially malignant disorders.

Matched MeSH terms: Organic Chemicals
The Lichen Flavin-Dependent Halogenase, DnHal: Identification, Heterologous Expression and Functional Characterization

Hasan NS, Ling JG, Bakar MFA, Seman WMKW, Murad AMA, Bakar FDA, et al.

Appl Biochem Biotechnol, 2023 Nov;195(11):6708-6736.
PMID: 36913095 DOI: 10.1007/s12010-022-04304-w

Enzymatic halogenation captures scientific interest considering its feasibility in modifying compounds for chemical diversity. Currently, majority of flavin-dependent halogenases (F-Hals) were reported from bacterial origin, and as far as we know, none from lichenized fungi. Fungi are well-known producers of halogenated compounds, so using available transcriptomic dataset of Dirinaria sp., we mined for putative gene encoding for F-Hal. Phylogenetic-based classification of the F-Hal family suggested a non-tryptophan F-Hals, similar to other fungal F-Hals, which mainly act on aromatic compounds. However, after the putative halogenase gene from Dirinaria sp., dnhal was codon-optimized, cloned, and expressed in Pichia pastoris, the ~63 kDa purified enzyme showed biocatalytic activity towards tryptophan and an aromatic compound methyl haematommate, which gave the tell-tale isotopic pattern of a chlorinated product at m/z 239.0565 and 241.0552; and m/z 243.0074 and 245.0025, respectively. This study is the start of understanding the complexities of lichenized fungal F-hals and its ability to halogenate tryptophan and other aromatic. compounds which can be used as green alternatives for biocatalysis of halogenated compounds.

Matched MeSH terms: Organic Chemicals
Eliminating xenobiotics organic compounds from greywater through green synthetic nanoparticles

Heshammuddin NA, Al-Gheethi A, Saphira Radin Mohamed RM, Bin Khamidun MH

Environ Res, 2023 Apr 01;222:115316.
PMID: 36669587 DOI: 10.1016/j.envres.2023.115316

Xenobiotic Organic Compounds (XOCs) have been widely considered to be pollutant compounds due to their harmful impacts on aquatic life. However, there have been few rigorous studies of cutting-edge technology used to eradicate XOCs and their presence in bathroom greywater. The present review provides a comprehensive examination of current methodologies used for removing XOCs by photocatalysis of green nanoparticles. It was appeared that zinc oxide nanoparticles (ZnO NPs) have high efficiency (99%) in photocatalysis process. Green synthesis provides proven processes that do not require dangerous chemicals or expensive equipment, making photocatalysis a potential solution for the status quo. XOCs residue was decomposed, and pollutants were eliminated with varied degrees of efficiency using green synthesis ZnO nanoparticles. It is hypothesized that the utilization of photocatalysis can create a greywater treatment system capable of degrading the toxic XOCs in greywater while increasing the pace of production. Hence, this review will be beneficial in improving greywater quality and photocatalysis using green nanoparticles can be an immediate platform in solving the issue regarding the existence of XOCs in greywater in Malaysia. Researchers in the future may benefit from focusing on optimizing photocatalytic degradation using green-synthesis ZnO. It might also help with the creativity and productivity of the next generation of authoritative concerns, notably water conservation.

Matched MeSH terms: Organic Chemicals
Fulltext Parametric optimization and structural feature analysis of humic acid extraction from lignite

Rashid T, Sher F, Jusoh M, Joya TA, Zhang S, Rasheed T, et al.

Environ Res, 2023 Mar 01;220:115160.
PMID: 36580987 DOI: 10.1016/j.envres.2022.115160

Humic acid (HA) is a complex organic compound made up of small molecules. A variety of raw materials are used to manufacture HA, due to which the structure and composition of HA vary widely. In this study, nitric acid oxidation of two coal samples from Lakhra (Pakistan) was followed by HA extraction using 2.5, 3.0 and 3.5% KOH solutions. The impact of different operating parameters such as; the effect of KOH concentrations, KOH-coal proportion, extraction time and pH range influencing the HA extraction efficiency was optimally investigated. Commercial HA applications possess numerous challenges, including valuable applications and sub-optimal extraction techniques. A significant limitation of conventional experimental methods is that they can only investigate one component at a time. It is necessary to improve the current processing conditions, this can only be achieved by modelling and optimization of the process conditions to meet market demands. A comprehensive evaluation and prediction of HA extraction using Response Surface Methodology (RSM) are also being reported for the first time in this study. The maximum HA extraction efficiency of 89.32% and 87.04% for coal samples 1 and 2 respectively was achieved with the lowest possible pH of 1.09 (coal sample 1) and 1(coal sample 2), which is remarkably lower as compared to those reported in the literature for conventional alkaline extraction process. The model was evaluated for two coal samples through the coefficient of determination (R2), Root Means Square Error (RMSE), and Mean Average Error (MEE). The results of RSM for coal sample 1 (R2 = 0.9795, RMSE = 4.784) and coal sample 2 (R2 = 0.9758, RMSE = 4.907) showed that the model is well suited for HA extraction efficiency predictions. The derived humic acid from lignite coal was analyzed using elemental analysis, UV-Visible spectrophotometry and Fourier-transformed infrared (FTIR) spectroscopy techniques. Scanning Electron Microscopy (SEM) was applied to analyze the morphological modifications of the extracted HA after treatment with 3.5% KOH solution. For agricultural objectives, such as soil enrichment, enhancing plant growth conditions, and creating green energy solutions, this acquired HA can be made bioactive. This study not only establishes a basis for research into the optimized extraction of HA from lignite coal, but it also creates a new avenue for the efficient and clean use of lignite.

Matched MeSH terms: Organic Chemicals
Protease activity is maintained in Nepenthes ampullaria digestive fluids depleted of endogenous proteins with compositional changes

Ravee R, Baharin A, Cho WT, Ting TY, Goh HH

Physiol Plant, 2021 Dec;173(4):1967-1978.
PMID: 34455610 DOI: 10.1111/ppl.13540

Nepenthes ampullaria is a unique carnivorous tropical pitcher plant with the detritivorous capability of sequestering nutrients from leaf litter apart from being insectivorous. The changes in the protein composition and protease activity of its pitcher fluids during the early opening of pitchers (D0 and D3C) were investigated via a proteomics approach and a controlled protein depletion experiment (D3L). A total of 193 proteins were identified. Common proteins such as pathogenesis-related protein, proteases (Nep [EC:3.4.23.12], SCP [EC:3.4.16.-]), peroxidase [EC:1.11.1.7], GDSL esterase/lipase [EC:3.1.1.-], and purple acid phosphatase [EC:3.1.3.2] were found in high abundance in the D0 pitchers and were replenished in D3L samples. This reflects their importance for biological processes upon pitcher opening. Meanwhile, prey-inducible chitinases [EC:3.2.1.14] were found in D0 but not in D3C and D3L samples, which suggests their degradation in the absence of prey. Protease activity assays demonstrated the replenishment of proteases in D3L with similar levels of proteolytic activities to that of D3C samples. This supports a feedback mechanism and signaling in the molecular regulation of endogenous protein secretion, turnover, and activity in Nepenthes pitcher fluids. Furthermore, we also discovered several new enzymes (XTH [EC:2.4.1.207], PAE [EC:3.1.1.98]) with possible functions in cell wall degradation that could contribute to the detritivory habit of N. ampullaria.

Matched MeSH terms: Organic Chemicals
Metal-organic frameworks for pesticidal persistent organic pollutants detection and adsorption - A mini review

Wagner M, Andrew Lin KY, Oh WD, Lisak G

J Hazard Mater, 2021 07 05;413:125325.
PMID: 33601143 DOI: 10.1016/j.jhazmat.2021.125325

The global population growth demands intensification of anthropogenic processes, thus leading to inter alia pollution of both land and aquatic environments with toxic organic compounds. Particularly harmful synthetic compounds are classified as persistent organic pollutants (POPs). Their relatively high chemical resistance resulted in a worldwide ban or strict control on the use of POPs. The majority of POPs were commonly used as pesticides, and unfortunately, some of them are still utilized as an aid in agricultural practices. Therefore, environmental monitoring in terms of reliable detection and quantification of pesticidal POPs is an ever-increasing need. Chemical sensors and adsorption materials crafted for specific pesticide operate on host-guest interactions should provide selectivity and sensitivity, thus leading to the detection of target molecule down to the nanomolar range. This could be achieved with materials exhibiting a very large active surface area, well-defined structure, and high stability. The novel materials studied in that context are metal-organic frameworks (MOFs). The structure of various MOFs can be functionalized to provide desired host-guest interactions. In this mini-review, we critically discuss the application of MOFs for the detection and adsorption of selected pesticides that are classified as POPs according to the Stockholm Convention.

Matched MeSH terms: Organic Chemicals
Relating molecular descriptors to frontier orbital energy levels, singlet and triplet excited states of fused tricyclics using machine learning

Woon KL, Chong ZX, Ariffin A, Chan CS

J Mol Graph Model, 2021 06;105:107891.
PMID: 33765526 DOI: 10.1016/j.jmgm.2021.107891

Fused tricyclic organic compounds are an important class of organic electronic materials. In designing molecules for organic electronics, knowing what chemical structure that be used to tune the molecular property is one of the keys that can help to improve the material performance. In this research, we applied machine learning and data analytic approaches in addressing this problem. The energy states (Lowest Unoccupied Molecular Orbital (HOMO), Highest Occupied Molecular Orbitals (LUMO), singlet (Es) and triplet (ET) energy) of more than 10 thousand fused tricyclics are calculated. Corresponding descriptors are also generated. We find that the Coulomb matrix is a poorer descriptor than high-level descriptors in a multilayer perceptron neural network. Correlations as high as 0.95 is obtained using a multilayer perceptron neural network with Mean Absolute Error as low as 0.08 eV. The descriptors that are important in tuning the energy levels are revealed using the Random Forest algorithm. Correlations of such descriptors are also plotted. We found that the higher the number of tertiary amines, the deeper are the HOMO and LUMO levels. The presence of NN in the aromatic rings can be used to tune the ES. However, there is no single dominant descriptor that can be correlated with the ET. A collection of descriptors is found to give a far better correlation with ET. This research demonstrated that machine learning and data analytics in guiding how certain chemical substructures correlate with the molecule energy states.

Matched MeSH terms: Organic Chemicals*
Fulltext Solution Processed PVB/Mica Flake Coatings for the Encapsulation of Organic Solar Cells

Channa IA, Chandio AD, Rizwan M, Shah AA, Bhatti J, Shah AK, et al.

Materials (Basel), 2021 May 12;14(10).
PMID: 34065936 DOI: 10.3390/ma14102496

Organic photovoltaics (OPVs) die due to their interactions with environmental gases, i.e., moisture and oxygen, the latter being the most dangerous, especially under illumination, due to the fact that most of the active layers used in OPVs are extremely sensitive to oxygen. In this work we demonstrate solution-based effective barrier coatings based on composite of poly(vinyl butyral) (PVB) and mica flakes for the protection of poly (3-hexylthiophene) (P3HT)-based organic solar cells (OSCs) against photobleaching under illumination conditions. In the first step we developed a protective layer with cost effective and environmentally friendly methods and optimized its properties in terms of transparency, barrier improvement factor, and bendability. The developed protective layer maintained a high transparency in the visible region and improved oxygen and moisture barrier quality by the factor of ~7. The resultant protective layers showed ultra-flexibility, as no significant degradation in protective characteristics were observed after 10 K bending cycles. In the second step, a PVB/mica composite layer was applied on top of the P3HT film and subjected to photo-degradation. The P3HT films coated with PVB/mica composite showed improved stability under constant light irradiation and exhibited a loss of <20% of the initial optical density over the period of 150 h. Finally, optimized barrier layers were used as encapsulation for organic solar cell (OSC) devices. The lifetime results confirmed that the stability of the OSCs was extended from few hours to over 240 h in a sun test (65 °C, ambient RH%) which corresponds to an enhanced lifetime by a factor of 9 compared to devices encapsulated with pristine PVB.

Matched MeSH terms: Organic Chemicals
Fulltext Application of ultrasonication at different microbial growth stages during apple juice fermentation by Lactobacillus plantarum: Investigation on the metabolic response

Wang H, Tao Y, Li Y, Wu S, Li D, Liu X, et al.

Ultrason Sonochem, 2021 May;73:105486.
PMID: 33639530 DOI: 10.1016/j.ultsonch.2021.105486

In this work, low-intensity ultrasonication (58.3 and 93.6 W/L) was performed at lag, logarithmic and stationary growth phases of Lactobacillus plantarum in apple juice fermentation, separately. Microbial responses to sonication, including microbial growth, profiles of organic acids profile, amino acids, phenolics, and antioxidant capacity, were examined. The results revealed that obvious responses were made by Lactobacillus plantarum to ultrasonication at lag and logarithmic phases, whereas sonication at stationary phase had a negligible impact. Sonication at lag and logarithmic phases promoted microbial growth and intensified biotransformation of malic acid to lactic acid. For example, after sonication at lag phase for 0.5 h, microbial count and lactic acid content in the ultrasound-treated samples at 58.3 W/L reached 7.91 ± 0.01 Log CFU/mL and 133.70 ± 7.39 mg/L, which were significantly higher than that in the non-sonicated samples. However, the ultrasonic effect on microbial growth and metabolism of organic acids attenuated with fermentation. Moreover, ultrasonication at lag and logarithmic phases had complex influences on the metabolism of apple phenolics such as chlorogenic acid, caffeic acid, procyanidin B2, catechin and gallic acid. Ultrasound could positively affect the hydrolysis of chlorogenic acid to caffeic acid, the transformation of procyanidin B2 and decarboxylation of gallic acid. The metabolism of organic acids and free amino acids in the sonicated samples was statistically correlated with phenolic metabolism, implying that ultrasound may benefit phenolic derivation by improving the microbial metabolism of organic acids and amino acids.

Matched MeSH terms: Organic Chemicals/metabolism
Fulltext Physical Properties of Thermoplastic Starch Derived from Natural Resources and Its Blends: A Review

Diyana ZN, Jumaidin R, Selamat MZ, Ghazali I, Julmohammad N, Huda N, et al.

Polymers (Basel), 2021 Apr 26;13(9).
PMID: 33925897 DOI: 10.3390/polym13091396

Thermoplastic starch composites have attracted significant attention due to the rise of environmental pollutions induced by the use of synthetic petroleum-based polymer materials. The degradation of traditional plastics requires an unusually long time, which may lead to high cost and secondary pollution. To solve these difficulties, more petroleum-based plastics should be substituted with sustainable bio-based plastics. Renewable and natural materials that are abundant in nature are potential candidates for a wide range of polymers, which can be used to replace their synthetic counterparts. This paper focuses on some aspects of biopolymers and their classes, providing a description of starch as a main component of biopolymers, composites, and potential applications of thermoplastics starch-based in packaging application. Currently, biopolymer composites blended with other components have exhibited several enhanced qualities. The same behavior is also observed when natural fibre is incorporated with biopolymers. However, it should be noted that the degree of compatibility between starch and other biopolymers extensively varies depending on the specific biopolymer. Although their efficacy is yet to reach the level of their fossil fuel counterparts, biopolymers have made a distinguishing mark, which will continue to inspire the creation of novel substances for many years to come.

Matched MeSH terms: Organic Chemicals
Fulltext Strain-Reduced Micro-LEDs Grown Directly Using Partitioned Growth

Lu S, Zhang Y, Zhang ZH, Tsai PC, Zhang X, Tan ST, et al.

Front Chem, 2021;9:639023.
PMID: 33816438 DOI: 10.3389/fchem.2021.639023

Strain-reduced micro-LEDs in 50 μm × 50 μm, 100 μm × 100 μm, 200 μm × 200 μm, 500 μm × 500 μm, and 1,000 μm × 1,000 μm sizes were grown on a patterned c-plane sapphire substrate using partitioned growth with the metal-organic chemical-vapor deposition (MOCVD) technique. The size effect on the optical properties and the indium concentration for the quantum wells were studied experimentally. Here, we revealed that the optical properties can be improved by decreasing the chip size (from 1,000 to 100 µm), which can correspondingly reduce the in-plane compressive stress. However, when the chip size is further reduced to 50 μm × 50 μm, the benefit of strain release is overridden by additional defects induced by the higher indium incorporation in the quantum wells and the efficiency of the device decreases. The underlying mechanisms of the changing output power are uncovered based on different methods of characterization. This work shows the rules of thumb to achieve optimal power performance for strain-reduced micro-LEDs through the proposed partitioned growth process.

Matched MeSH terms: Organic Chemicals
Fulltext CHARACTERISTIC OF PRASEODYMIUM OXIDE DOPED MANGANESE/RUTHENIUM CATALYST IN METHANATION: EFFECT CALCINATION TEMPERATURE

Salmiah Jamal Mat Rosid, Susilawati Toemen, Wan Azelee Wan Abu Bakar, Sarina Mat Rosid, Wan Nazwanie Wan Abdullah, Siti Maisarah Aziz

Journal of Academia Universiti Teknologi MARA Negeri Sembilan, 2021;9(1):49-55.
MyJurnal

Lanthanide element in the methanation reaction gives an excellent catalytic performance at low reaction temperature. Praseodymium is one of lanthanide element and was chosen due to its properties which are thermally stable and provide excess of oxygen in the oxide lattice. Therefore, a catalyst of Ru/Mn/Pr (5:30:65)/Al2O3 (RMP, 5:30:65/Al2O3) was prepared via wetness impregnation method and the effect of calcination temperature on the catalyst performance was investigated using FTIR analysis. The RMP/Al2O3 catalyst calcined at 800 o C was chosen as an excel catalyst with CO2 conversion of 96.9% and CH4 formation of 45.1% at 350 o C reaction temperature. From the EDX mapping, it can be observed that the distribution of all element is homogeneous at 800 o C and 900 o C except Ru, O and Al at 1000 o C calcination temperature. The image from FESEM also shows the presence of some crystal shape on the catalyst surface. From the FTIR analysis, the peak stretching and bending mode of O-H bond decreased when the calcination temperature increased.

Matched MeSH terms: Organic Chemicals
Targeting Caveolin-1 and Claudin-5 with AY9944, Improve Blood-Brain Barrier Permeability; Computational Simulation and Experimental Study

Gholami L, Jokar S, Fatahi Y, Samandari H, Hamzehalipour Almaki J, Hosseini M, et al.

Cell Mol Neurobiol, 2020 Nov 21.
PMID: 33222099 DOI: 10.1007/s10571-020-01004-z

The current study aimed to determine the protective effect of AY9944 related to Caveolin-1 and Claudin-5 role in lipid raft, which can rescue the blood-brain barrier from enhanced permeability. Therefore, in vivo analyses were performed following ischemia in normal, ischemic, and AY9944-treated animal groups. The results revealed that AY9944 reduced the infarct size, edema, and brain water content. The extravasation of Alb-Alexa 594 and biocytin-TMR was minimum in the AY9944-treated animals. The results showed a significant decrease in the expression level of Caveolin-1 over 8 h and 48 h and a remarkable increase in the level of Claudin-5 over 48 h following ischemia in AY9944-treated animals. Molecular docking simulation demonstrated that AY9944 exerts a possible protective role via attenuating the interaction of the Caveolin-1 and cholesterol in lipid raft. These findings point out that AY9944 plays a protective role in stroke by means of blood-brain barrier preservation. Proper neural function essentially needs a constant homeostatic brain environment which is provided by the blood-brain barrier. Rescuing blood-brain barrier from enhanced permeability via inducing the protective effect of AY9944 related to caveolin-1 and claudin-5 role in lipid raft was the aim of the current study.

Matched MeSH terms: Organic Chemicals
Fulltext Comparative metabolomics of Phialemonium curvatum as an omnipotent fungus cultivated on crude palm oil versus glucose

Zamani AI, Barig S, Ibrahim S, Mohd Yusof H, Ibrahim J, Low JYS, et al.

Microb Cell Fact, 2020 Sep 09;19(1):179.
PMID: 32907579 DOI: 10.1186/s12934-020-01434-w

BACKGROUND: Sugars and triglycerides are common carbon sources for microorganisms. Nonetheless, a systematic comparative interpretation of metabolic changes upon vegetable oil or glucose as sole carbon source is still lacking. Selected fungi that can grow in acidic mineral salt media (MSM) with vegetable oil had been identified recently. Hence, this study aimed to investigate the overall metabolite changes of an omnipotent fungus and to reveal changes at central carbon metabolism corresponding to both carbon sources.
RESULTS: Targeted and non-targeted metabolomics for both polar and semi-polar metabolites of Phialemonium curvatum AWO2 (DSM 23903) cultivated in MSM with palm oil (MSM-P) or glucose (MSM-G) as carbon sources were obtained. Targeted metabolomics on central carbon metabolism of tricarboxylic acid (TCA) cycle and glyoxylate cycle were analysed using LC-MS/MS-TripleQ and GC-MS, while untargeted metabolite profiling was performed using LC-MS/MS-QTOF followed by multivariate analysis. Targeted metabolomics analysis showed that glyoxylate pathway and TCA cycle were recruited at central carbon metabolism for triglyceride and glucose catabolism, respectively. Significant differences in organic acids concentration of about 4- to 8-fold were observed for citric acid, succinic acid, malic acid, and oxaloacetic acid. Correlation of organic acids concentration and key enzymes involved in the central carbon metabolism was further determined by enzymatic assays. On the other hand, the untargeted profiling revealed seven metabolites undergoing significant changes between MSM-P and MSM-G cultures.
CONCLUSIONS: Overall, this study has provided insights on the understanding on the effect of triglycerides and sugar as carbon source in fungi global metabolic pathway, which might become important for future optimization of carbon flux engineering in fungi to improve organic acids production when vegetable oil is applied as the sole carbon source.

Matched MeSH terms: Organic Chemicals/metabolism*
Fulltext Experimental Investigation and Performance Evaluation of Modified Viscoelastic Surfactant (VES) as a New Thickening Fracturing Fluid

Chieng ZH, Mohyaldinn ME, Hassan AM, Bruining H

Polymers (Basel), 2020 Jun 30;12(7).
PMID: 32629958 DOI: 10.3390/polym12071470

In hydraulic fracturing, fracturing fluids are used to create fractures in a hydrocarbon reservoir throughout transported proppant into the fractures. The application of many fields proves that conventional fracturing fluid has the disadvantages of residue(s), which causes serious clogging of the reservoir's formations and, thus, leads to reduce the permeability in these hydrocarbon reservoirs. The development of clean (and cost-effective) fracturing fluid is a main driver of the hydraulic fracturing process. Presently, viscoelastic surfactant (VES)-fluid is one of the most widely used fracturing fluids in the hydraulic fracturing development of unconventional reservoirs, due to its non-residue(s) characteristics. However, conventional single-chain VES-fluid has a low temperature and shear resistance. In this study, two modified VES-fluid are developed as new thickening fracturing fluids, which consist of more single-chain coupled by hydrotropes (i.e., ionic organic salts) through non-covalent interaction. This new development is achieved by the formulation of mixing long chain cationic surfactant cetyltrimethylammonium bromide (CTAB) with organic acids, which are citric acid (CA) and maleic acid (MA) at a molar ratio of (3:1) and (2:1), respectively. As an innovative approach CTAB and CA are combined to obtain a solution (i.e., CTAB-based VES-fluid) with optimal properties for fracturing and this behaviour of the CTAB-based VES-fluid is experimentally corroborated. A rheometer was used to evaluate the visco-elasticity and shear rate & temperature resistance, while sand-carrying suspension capability was investigated by measuring the settling velocity of the transported proppant in the fluid. Moreover, the gel breaking capability was investigated by determining the viscosity of broken VES-fluid after mixing with ethanol, and the degree of core damage (i.e., permeability performance) caused by VES-fluid was evaluated while using core-flooding test. The experimental results show that, at pH-value ( 6.17 ), 30 (mM) VES-fluid (i.e., CTAB-CA) possesses the highest visco-elasticity as the apparent viscosity at zero shear-rate reached nearly to 10 6 (mPa·s). Moreover, the apparent viscosity of the 30 (mM) CTAB-CA VES-fluid remains 60 (mPa·s) at (90 ∘ C) and 170 (s - 1 ) after shearing for 2-h, indicating that CTAB-CA fluid has excellent temperature and shear resistance. Furthermore, excellent sand suspension and gel breaking ability of 30 (mM) CTAB-CA VES-fluid at 90 ( ∘ C) was shown; as the sand suspension velocity is 1.67 (mm/s) and complete gel breaking was achieved within 2 h after mixing with the ethanol at the ratio of 10:1. The core flooding experiments indicate that the core damage rate caused by the CTAB-CA VES-fluid is ( 7.99 % ), which indicate that it does not cause much damage. Based on the experimental results, it is expected that CTAB-CA VES-fluid under high-temperature will make the proposed new VES-fluid an attractive thickening fracturing fluid.

Matched MeSH terms: Organic Chemicals
Fulltext The Role of Green Building Materials in Reducing Environmental and Human Health Impacts

Khoshnava SM, Rostami R, Mohamad Zin R, Štreimikienė D, Mardani A, Ismail M

Int J Environ Res Public Health, 2020 04 10;17(7).
PMID: 32290074 DOI: 10.3390/ijerph17072589

Conventional building materials (CBMs) made from non-renewable resources are the main source of indoor air contaminants, whose impact can extend from indoors to outdoors. Given their sustainable development (SD) prospect, green building materials (GBMs) with non-toxic, natural, and organic compounds have the potential to reduce their overall impacts on environmental and human health. In this regard, biocomposites as GBMs are environmentally friendly, safe, and recyclable materials and their replacement of CBMs reduces environmental impacts and human health concerns. This study aims to develop a model of fully hybrid bio-based biocomposite as non-structural GBMs and compare it with fully petroleum-based composite in terms of volatile organic compound (VOC) emissions and human health impacts. Using a small chamber test (American Society for Testing and Materials (ASTM)-D5116) for VOC investigation and SimaPro software modeling with the ReCiPe method for evaluating human health impacts. Life cycle assessment (LCA) methodology is used, and the results indicate that switching the fully hybrid bio-based biocomposite with the fully petroleum-based composite could reduce more than 50% impacts on human health in terms of indoor and outdoor. Our results indicate that the usage of biocomposite as GBMs can be an environmentally friendly solution for reducing the total indoor and outdoor impacts on human health.

Matched MeSH terms: Organic Chemicals
Rapid detection of porcine DNA in processed food samples using a streamlined DNA extraction method combined with the SYBR Green real-time PCR assay

Tan LL, Ahmed SA, Ng SK, Citartan M, Raabe CA, Rozhdestvensky TS, et al.

Food Chem, 2020 Mar 30;309:125654.
PMID: 31678669 DOI: 10.1016/j.foodchem.2019.125654

A specialized DNA extraction method and a SYBR Green quantitative polymerase chain reaction (SyG-qPCR) assay were combined to generate a ready-to-use kit for rapid detection of porcine admixtures in processed meat products. Our qPCR assay utilized repetitive LINE-1 elements specific to the genome of Sus scrofa domesticus (pig) as a target and incorporated internal controls. We improved the genomic DNA extraction method, and reduced extraction times to the minimum. The method was validated for specificity, sensitivity (0.001% w/w) and robustness, and values were compared with those of a commercially available kit. We also tested our method using 121 processed food products and consistently detected amplification only in samples containing pork. Due to its efficiency and cost-effectiveness, our method represents a valuable new method for detecting food adulteration with pork that is superior to existing quality control approaches.

Matched MeSH terms: Organic Chemicals/chemistry*
Fulltext Fractionation of as, co, cu and zn by sequential extraction in surface sediment of Kuala Terengganu river estuary

Muhammad Nazirul Mubin Abd Halim Shah, Lee, Siang Hing, Mohd Yusoff Nurulnadia, Meng, Chuan Ong

Malaysian Journal of Applied Sciences, 2020;5(2):57-68.
MyJurnal

Development and urbanization processes around Terengganu River estuary are expected to release a significant amount of heavy metals into the existing surface sediment. However, information on how and why these metals are attached into specific fraction of sediments is still lacking. Therefore, this study aimed to explain the heavy metal concentration distribution in each available fraction in Terengganu River estuary. In this study, nine surface sediments originated from various human activities area in Terengganu River estuary were collected during four different sampling sessions in 2017. Heavy metal content from the collected sediments were extracted using 3-steps BCR sequential extraction method followed by detection using Inductively Coupled Plasma Mass-Spectrometer (ICP-MS) and we discovered that the total concentration of arsenic (As), cobalt (Co), copper (Cu), and zinc (Zn) ranged from 2.18 to 17.48 mg/kg dry wt., 2.53 to 20.53 mg/kg dry wt., 1.01 to 13.13 mg/kg dry wt., and 6.10 to 65.71 mg/kg dry wt., respectively. Dominance of metals in each fraction can be arranged as follows: As: residual > reducible > exchangeable > oxidizable; Co: residual > exchangeable > reducible > oxidizable; Cu: residual > oxidizable > reducible > exchangeable; Zn: residual > exchangeable > reducible > oxidizable. Availability of metals in the sediment at Terengganu River estuary is limited since that majority of metals resides in non-mobilisable fraction of the sediment. In essence, the sequential extraction provides information regarding the metals’ fractionation, availability and mobility, which could be used in assessing the environmental contamination in the area.

Matched MeSH terms: Organic Chemicals
Fulltext Potential of citronella oil as natural mosquito repellent agent in formulated fabric softener finishes

Aznin Baharudin, Nor Akmalazura Jani, Azyati Azreen, A. A. Assyura, Hawa Pornomo, M. Hafiz Mehat

Borneo Akademika, 2020;4(1):1-12.
MyJurnal

This study is focused on formulating a natural-based fabric softener using baking
soda and vinegar with the addition of insect repellent finish of citronella oil and
vanillin. The effectiveness of the fabric softener was evaluated by conducting a fabric
stiffness test on both untreated and treated fabric samples with the softener
formulated in this study. The assessment for the efficacy of insect repellence was
carried out using 3 human participants of the same gender and build but different
blood type, positioned at a mosquito infested area. Three tests; negative, positive, and
normal tests were conducted to evaluate the effectiveness of the formulated mosquito
repellent finishes in the fabric softener. The results show that the formulated fabric
softener is good mosquito repellent and it is good at giving a soft effect on the treated
fabric.

Matched MeSH terms: Organic Chemicals
Applicability of BaTiO3/graphene oxide (GO) composite for enhanced photodegradation of methylene blue (MB) in synthetic wastewater under UV-vis irradiation

Mengting Z, Kurniawan TA, Fei S, Ouyang T, Othman MHD, Rezakazemi M, et al.

Environ Pollut, 2019 Dec;255(Pt 1):113182.
PMID: 31541840 DOI: 10.1016/j.envpol.2019.113182

Methylene blue (MB) is a dye pollutant commonly present in textile wastewater. We investigate and critically evaluate the applicability of BaTiO3/GO composite for photodegradation of MB in synthetic wastewater under UV-vis irradiation. To enhance its performance, the BaTiO3/GO composite is varied based on the BaTiO3 weight. To compare and evaluate any changes in their morphologies and crystalline structures before and after treatment, BET (Brunauer-Emmett-Teller), XRD (X-ray diffraction), FTIR (Fourier transform infrared spectroscopy), SEM (scanning electron microscopy) and TEM (transmission electron microscopy) tests are conducted, while the effects of reaction time, pH, dose of photocatalyst and initial MB concentration on its photodegradation by the composite are also investigated under identical conditions. The degradation pathways and removal mechanisms of MB by the BaTiO3/GO are elaborated. It is evident from this study that the BaTiO3/GO composite is promising for MB photodegradation through ·OH. Under optimized conditions (0.5 g/L of dose, pH 9.0, and 5 mg/L of MB concentration), the composite with 1:2 dose ratio of BaTiO3/GO has the highest MB degradation rate (95%) after 3 h of UV vis irradiation. However, its treated effluents still could not comply with the discharge standard limit of less than 0.2 mg/L imposed by national environmental legislation. This suggests that additional biological treatments are still required to deal with the remaining oxidation by-products of MB, still present in the wastewater samples such as 3,7-bis (dimethyl-amino)-10H-phenothiazine 5-oxide.

Matched MeSH terms: Organic Chemicals

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