Displaying publications 1 - 20 of 452 in total

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  1. Tripathi BM, Kim M, Lai-Hoe A, Shukor NA, Rahim RA, Go R, et al.
    FEMS Microbiol Ecol, 2013 Nov;86(2):303-11.
    PMID: 23773164 DOI: 10.1111/1574-6941.12163
    Little is known of the factors influencing soil archaeal community diversity and composition in the tropics. We sampled soils across a range of forest and nonforest environments in the equatorial tropics of Malaysia, covering a wide range of pH values. DNA was PCR-amplified for the V1-V3 region of the 16S rRNA gene, and 454-pyrosequenced. Soil pH was the best predictor of diversity and community composition of Archaea, being a stronger predictor than land use. Archaeal OTU richness was highest in the most acidic soils. Overall archaeal abundance in tropical soils (determined by qPCR) also decreased at higher pH. This contrasts with the opposite trend previously found in temperate soils. Thaumarcheota group 1.1b was more abundant in alkaline soils, whereas group 1.1c was only detected in acidic soils. These results parallel those found in previous studies in cooler climates, emphasizing niche conservatism among broad archaeal groups. Among the most abundant operational taxonomic units (OTUs), there was clear evidence of niche partitioning by pH. No individual OTU occurred across the entire range of pH values. Overall, the results of this study show that pH plays a major role in structuring tropical soil archaeal communities.
    Matched MeSH terms: Trees
  2. Kuznetsov AN, Kuznetsova SP
    Izv. Akad. Nauk. Ser. Biol., 2013 Mar-Apr;?(2):206-16.
    PMID: 23789426
    This study was carried out during the period 1989-2011. The following areas were included: Vietnam, Laos, Cambodia, Indonesia, and Malaysia. Climax tropical forest and anthropogenically transformed ecosystems, including those damaged by the chemical warfare program of the United States in Vietnam, were investigated. Some regularities in the structure dynamics and functioning of forests ecosystems under a tropical monsoon climate have been revealed. The principles of classification of tropical forests have been elaborated. The major results of investigation of the tropical monsoon forests in Vietnam are given.
    Matched MeSH terms: Trees/classification*; Trees/growth & development
  3. Beaucournu JC, Wells K
    Parasite, 2009 Dec;16(4):283-7.
    PMID: 20092059
    We report on fleas collected from small mammals in a lower mountane rainforest in the Crocker Range National Park, Sabah, Borneo. Macrostylophora durdeni n. sp., collected from Dremomys everetti and, of minor importance, Tupaia montana, is described. Further records include Gryphopsylla jacobsoni segragata and Lentistivalius vomerus from T. montana.
    Matched MeSH terms: Trees
  4. Albani A, Ibrahim MZ, Yong KH
    Data Brief, 2019 Aug;25:104306.
    PMID: 31406911 DOI: 10.1016/j.dib.2019.104306
    The measurement of this data aims to evaluate the wind shear variability at three selected sites in Malaysia. The sites are Kudat in Sabah, Kijal in Terengganu and Langkawi in Kedah. Both sites in Kudat and Kijal is located in coastal areas with few buildings or trees, while the site in Langkawi is a coastal area with many buildings or trees. The variables were measured using the sensors that mounted on the wind mast with the maximum height from 55 m to 70 m from ground level. The variables measured were wind speed, wind direction, temperature, and pressure, while the wind shear data were directly generated using the power law equation. The averaged wind shear based on measured multiple height wind speed at selected sites is larger than the 1/7 law (0.143). Also, the value of wind shear was higher in order Langkawi > Kudat > Kijal. Ultimately, the wind shear data are essential and can be reused in the wind energy potential study, especially for data extrapolation to desired wind turbine hub height.
    Matched MeSH terms: Trees
  5. Luskin MS, Johnson DJ, Ickes K, Yao TL, Davies SJ
    Proc Biol Sci, 2021 03 10;288(1946):20210001.
    PMID: 33653133 DOI: 10.1098/rspb.2021.0001
    Large vertebrates are rarely considered important drivers of conspecific negative density-dependent mortality (CNDD) in plants because they are generalist consumers. However, disturbances like trampling and nesting also cause plant mortality, and their impact on plant diversity depends on the spatial overlap between wildlife habitat preferences and plant species composition. We studied the impact of native wildlife on a hyperdiverse tree community in Malaysia. Pigs (Sus scrofa) are abnormally abundant at the site due to food subsidies in nearby farmland and they construct birthing nests using hundreds of tree saplings. We tagged 34 950 tree saplings in a 25 ha plot during an initial census and assessed the source mortality by recovering tree tags from pig nests (n = 1672 pig-induced deaths). At the stand scale, pigs nested in flat dry habitats, and at the local neighbourhood scale, they nested within clumps of saplings, both of which are intuitive for safe and efficient nest building. At the stand scale, flat dry habitats contained higher sapling densities and higher proportions of common species, so pig nesting increased the weighted average species evenness across habitats. At the neighbourhood scale, pig-induced sapling mortality was associated with higher heterospecific and especially conspecific sapling densities. Tree species have clumped distributions due to dispersal limitation and habitat filtering, so pig disturbances in sapling clumps indirectly caused CNDD. As a result, Pielou species evenness in 400 m2 quadrats increased 105% more in areas with pig-induced deaths than areas without disturbances. Wildlife induced CNDD and this supported tree species evenness, but they also drove a 62% decline in sapling densities from 1996 to 2010, which is unsustainable. We suspect pig nesting is an important feature shaping tree composition throughout the region.
    Matched MeSH terms: Trees*
  6. Fujinuma J, Harrison RD
    PLoS One, 2012;7(5):e37321.
    PMID: 22615977 DOI: 10.1371/journal.pone.0037321
    Edge-effects greatly extend the area of tropical forests degraded through human activities. At Pasoh, Peninsular Malaysia, it has been suggested that soil disturbance by highly abundant wild pigs (Sus scrofa), which feed in adjacent Oil Palm plantations, may have mediated the invasion of Clidemia hirta (Melastomataceae) into the diverse tropical lowland rain forest. To investigate this hypothesis, we established three 1 km transects from the forest/Oil Palm plantation boundary into the forest interior. We recorded the distribution of soil disturbance by wild pigs, C. hirta abundance, and environmental variables. These data were analyzed using a hierarchical Bayesian model that incorporated spatial auto-correlation in the environmental variables. As predicted, soil disturbance by wild pigs declined with distance from forest edge and C. hirta abundance was correlated with the level of soil disturbance. Importantly there was no effect of distance on C. hirta abundance, after controlling for the effect of soil disturbance. Clidemia hirta abundance was also correlated with the presence of canopy openings, but there was no significant association between the occurrence of canopy openings and distance from the edge. Increased levels of soil disturbance and C. hirta abundance were still detectable approximately 1 km from the edge, demonstrating the potential for exceptionally large-scale animal mediated edge effects.
    Matched MeSH terms: Trees
  7. Morton JF
    Basic Life Sci., 1992;59:739-65.
    PMID: 1417698
    Tannins are increasingly recognized as dietary carcinogens and as antinutrients interfering with the system's full use of protein. Nevertheless, certain tannin-rich beverages, masticatories, and folk remedies, long utilized in African, Asiatic, Pacific, and Latin American countries, are now appearing in North American sundry shops and grocery stores. These include guarana (Paullinia cupana HBK.) from Brazil, kola nut (Cola nitida Schott & Endl. and C. acuminata Schott & Endl.) from West Africa, and betel nut (Areca catechu L.) from Malaya. The betel nut, or arecanut, has long been associated with oral and esophageal cancer because of its tannin content and the tannin contributed by the highly astringent cutch from Acacia catechu L. and Uncaria gambir Roxb. and the aromatic, astringent 'pan' (leaves of Piper betel L.) chewed with it. In addition to the constant recreational/social ingestion of these plant materials, they are much consumed as aphrodisiacs and medications. Guarana and kola nut enjoy great popularity in their native lands because they are also rich in caffeine, which serves as a stimulant. Research and popular education on the deleterious effects of excessive tannin intake could do much to reduce the heavy burden of early mortality and health care, especially in developing countries.
    Matched MeSH terms: Trees/chemistry
  8. Katayama A, Kume T, Komatsu H, Ohashi M, Matsumoto K, Ichihashi R, et al.
    Tree Physiol, 2014 May;34(5):503-12.
    PMID: 24876294 DOI: 10.1093/treephys/tpu041
    Difficult access to 40-m-tall emergent trees in tropical rainforests has resulted in a lack of data related to vertical variations in wood CO2 efflux, even though significant variations in wood CO2 efflux are an important source of errors when estimating whole-tree total wood CO2 efflux. This study aimed to clarify vertical variations in wood CO2 efflux for emergent trees and to document the impact of the variations on the whole-tree estimates of stem and branch CO2 efflux. First, we measured wood CO2 efflux and factors related to tree morphology and environment for seven live emergent trees of two dipterocarp species at four to seven heights of up to ∼ 40 m for each tree using ladders and a crane. No systematic tendencies in vertical variations were observed for all the trees. Wood CO2 efflux was not affected by stem and air temperature, stem diameter, stem height or stem growth. The ratios of wood CO2 efflux at the treetop to that at breast height were larger in emergent trees with relatively smaller diameters at breast height. Second, we compared whole-tree stem CO2 efflux estimates using vertical measurements with those based on solely breast height measurements. We found similar whole-tree stem CO2 efflux estimates regardless of the patterns of vertical variations in CO2 efflux because the surface area in the canopy, where wood CO2 efflux often differed from that at breast height, was very small compared with that at low stem heights, resulting in little effect of the vertical variations on the estimate. Additionally, whole-tree branch CO2 efflux estimates using measured wood CO2 efflux in the canopy were considerably different from those measured using only breast height measurements. Uncertainties in wood CO2 efflux in the canopy did not cause any bias in stem CO2 efflux scaling, but affected branch CO2 efflux.
    Matched MeSH terms: Trees/growth & development; Trees/physiology*
  9. Katayama A, Kume T, Ichihashi R, Nakagawa M
    Tree Physiol, 2019 06 01;39(6):1000-1008.
    PMID: 30976804 DOI: 10.1093/treephys/tpz022
    Limited knowledge about vertical variation in wood CO2 efflux (Rwood) is still a cause of uncertainty in Rwood estimates at individual and ecosystem scales. Although previous studies found higher Rwood in the canopy, they examined several tree species of similar size. In contrast, in the present study, we measured vertical variation in Rwood for 18 trees including 13 species, using a canopy crane for a more precise determination of the vertical variation in Rwood, for various species and sizes of trees in order to examine the factors affecting vertical variation in Rwood and thus, to better understand the effect of taking into account the vertical and inter-individual variation on estimates of Rwood at the individual scale. We did not find any clear pattern of vertical variation; Rwood increased significantly with measurement height for only one tree, while it decreased for two more trees, and was not significantly related with measurement height in 15 other trees. Canopy to breast height Rwood ratio was not related to diameter at breast height or crown ratio, which supposedly are factors affecting vertical variation in Rwood. On average, Rwood estimates at individual scale, considering inter-individual variation but ignoring vertical variation, were only 6% higher than estimates considering both forms of variation. However, estimates considering vertical variation, while ignoring inter-individual variation, were 13% higher than estimates considering both forms of variation. These results suggest that individual measurements at breast height are more important for estimating Rwood at the individual scale, and that any error in Rwood estimation at this scale, due to the absence of any more measurements along tree height, is really quite negligible. This study measured various species and sizes of trees, which may be attributed to no clear vertical variation because factors causing vertical variation can differ among species and sizes.
    Matched MeSH terms: Trees/growth & development; Trees/metabolism*
  10. Ahmad Nazarudin M, Tsan F
    Sains Malaysiana, 2018;47:227-233.
    A study was conducted to investigate the duration of growth stages and flowering behaviour of a landscape tree,
    Xanthostemon chrysanthus (F. Muell.) Benth. This species is known as golden penda and locally known as jambu kuning.
    It is widely planted for urban beautification due to its distinctive coloured flowers. Under local climate condition, this
    species flowers throughout the year. However, the flowering of this species has not been studied extensively. In the present
    study, the growth of selected trees aged approximately six years after planting was monitored for a year. The growth
    duration was determined using the extended Biologishe Bundesanstalt, Bundessortenamt and Chemical Industry (BBCH)
    scale. Percentages of flower and fruit and new leaf abundances were expressed as estimated percentage of each stage as
    compared to total surface area of the tree crown. The vegetative and reproductive stages of the species required 198 and
    176 days, respectively. The flowering period took about 40 days from inflorescence bud swelling to drying and senescence
    of stamens and petals. Unsynchronized flowering was observed among the trees. The occurrence of flowers was also
    influenced by the development of new leaves or fruits. The information on the duration of each growth stage and the
    flowering behaviour of the species may enhance a more detailed study related to flowering of urban trees in Malaysia.
    Matched MeSH terms: Trees
  11. Bienaymé A, Servant M
    DOI: 10.1007/BF01884062
    During two years the authors have assembled monthly analytical data of oilpalms, from 15 different stations. The determinations spread as far as the French, Portuguese and Spanish territory in Africa and British Malaya also. The following analyses were carried out: iodine number, titer point, melting point and the carotenoids of these oils, according to origine, race and time of gathering. As to iodine number and amount of carotenoid, the race is decisive for these data; the oils from the natural stock of the Ivory Coast have a higher iodine number (57-60). The oils from the natural stock of Togo, Dahomey, Portuguese and French Guinea are richer in carotene (up to 0.16, even 0.19%) with medium iodine number (54-56). The oils from the industrial plantations, with selected trees of the race Dura-Deli, from the Far East as well as from the Ivory Coast, have lower iodine numbers (52-53) and are poor in carotene (0.05). South of the equator in Africa, all analysed races of oil palms had a lower iodine number (53-55) and were poor in carotene (0.05). During one year the amount of carotene fluctuates about one third of its maximum; this maximum is rather striking in Togo and Dahomey; it is to be found from January to May; period of high production of the oil in the Palm groves, e.g. in the dry season with warm climate and good insolation. Heavy rain-showers effect a rapid decrease of the contents of carotene after six weeks (duration of the formation of the fruit). Furthermore, the residual oils (extracted by solvents) were analysed; they are 2 to 3 times richer in carotenoids than the common palm oil; but the contents of β-carotene seems somewhat lower. The authors think it possible to find exactly defined uses for the different oils. © 1958 Uitgeverij Dr. W. Junk.
    Matched MeSH terms: Trees
  12. Naji, H.R., Sahri, M.H., Bakar, E.S., Soltani, M., Hamid, H.A.
    ASM Science Journal, 2014;8(1):36-43.
    MyJurnal
    Wood density and types of shrinkage were examined in two rubberwood latex timber clones of rubber (Hevea brasiliensis) namely RRIM 2020 and RRIM 2025, planted at densities of 500, 1000, 1500, and 2000 trees/ha, within a trial plot. The mean wood density showed a low descending trend towards high planting densities in both clones. Wood density was significantly and negatively correlated with planting density. The strength of correlation was moderate. The mean longitudinal shrinkage in both clones and tangential shrinkages in clone RRIM 2020 showed no significant difference among planting densities. The tangential (in RRIM 2025), radial and volumetric shrinkages in both clones decreased from low to high planting densities and the differences were more pronounced between densities of 500 trees/ha and 2000 trees/ha. The magnitudes of correlation between these shrinkages and planting density were low. The regression models indicated that wood density could be more ascribed by planting density followed by volumetric shrinkage. This study exhibited low variations in wood density and shrinkages among clones and the respective planting densities; however, RRIM 2025 was more stable than RRIM 2020.
    Matched MeSH terms: Trees
  13. Dohany AL, Shirai A, Lim BL, Huxsoll DL
    Jpn. J. Med. Sci. Biol., 1980 Oct;33(5):263-70.
    PMID: 7300038
    The populations of scrub typhus vector chiggers were compared in two developing oil palm areas, one 5 years old and the other 7 years old at the inception of the study. Both areas were located within the same oil palm scheme in central Peninsular Malaysia. Leptotrombidium (L.) deliense, a principal vector of scrub typhus in Malaysia, was found in reduced numbers in the older oil palm habitat. This reduction is attributed to changes in the microhabitat, specifically the elimination of grasses between the oil palm trees due to canopy shading and to cultural practices.
    Matched MeSH terms: Trees
  14. Huang Xy, Qi JQ, Xie JL, Hao JF, Qin BD, Chen SM
    Sains Malaysiana, 2015;44:17-23.
    The culms of bamboo Bambusa rigida ranging from 1, 3 and 5 year old were obtained and investigated for anatomical characteristics in different ages, heights and zones in radial direction of culm wall thickness. The vascular bundles were denser and smaller at the top portion and outer zone of all age groups. No significant differences in vascular bundle frequency and size were found among the tree age groups. Metaxylem vessels did not vary significantly among ages. Fibre and parenchyma were longer in the middle portion of the height and middle zone in radial direction of culms wall. No significant differences in fibre and parenchyma length were observed in all age groups. The wall thicknesses of fibre and parenchyma were thicker in the top portion and outer zone. Furthermore, the wall thicknesses of fibre and parenchyma increased significantly from 1 to 3 year, showing that there is a maturing progress from 1 to 3 year.
    Matched MeSH terms: Trees
  15. Kamudin N, Firdouse M, Han CS, M Yusof A
    Malays Orthop J, 2015 Mar;9(1):23-27.
    PMID: 28435591 MyJurnal DOI: 10.5704/MOJ.1503.001
    BACKGROUND: Monteggia fracture-dislocation is rare in children. Various reports attest to its rarity, while recording the many variant of this injury. It is, therefore, easy to miss the diagnosis in the absence of proper clinical examination and radiographs.

    CASE REPORT: This report highlights two rare variants of Monteggia fracture-dislocation seen in children. The first case was a 12-year old girl alleged to have fallen from a 15- feet tall tree and sustaining a combined type III Monteggia injury with ipsilateral Type II Salter-Harris injury of distal end radius with a metaphyseal fracture of the distal third of the ulna. The second case was a 13-year old who had sustained a closed fracture of atypical Type I Monteggia hybrid lesion, in a road traffic accident.

    CONCLUSION: This report highlights the rare variants of Monteggia fracture dislocation which could have been missed without proper clinical examinations and radiographs.

    Matched MeSH terms: Trees
  16. Dong SX, Davies SJ, Ashton PS, Bunyavejchewin S, Supardi MN, Kassim AR, et al.
    Proc Biol Sci, 2012 Oct 7;279(1744):3923-31.
    PMID: 22833269
    The response of tropical forests to global climate variability and change remains poorly understood. Results from long-term studies of permanent forest plots have reported different, and in some cases opposing trends in tropical forest dynamics. In this study, we examined changes in tree growth rates at four long-term permanent tropical forest research plots in relation to variation in solar radiation, temperature and precipitation. Temporal variation in the stand-level growth rates measured at five-year intervals was found to be positively correlated with variation in incoming solar radiation and negatively related to temporal variation in night-time temperatures. Taken alone, neither solar radiation variability nor the effects of night-time temperatures can account for the observed temporal variation in tree growth rates across sites, but when considered together, these two climate variables account for most of the observed temporal variability in tree growth rates. Further analysis indicates that the stand-level response is primarily driven by the responses of smaller-sized trees (less than 20 cm in diameter). The combined temperature and radiation responses identified in this study provide a potential explanation for the conflicting patterns in tree growth rates found in previous studies.
    Matched MeSH terms: Trees/growth & development*
  17. Shoaib LA, Safii SH, Idris N, Hussin R, Sazali MAH
    BMC Med Educ, 2024 Jan 11;24(1):58.
    PMID: 38212703 DOI: 10.1186/s12909-023-05022-5
    BACKGROUND: Growing demand for student-centered learning (SCL) has been observed in higher education settings including dentistry. However, application of SCL in dental education is limited. Hence, this study aimed to facilitate SCL application in dentistry utilising a decision tree machine learning (ML) technique to map dental students' preferred learning styles (LS) with suitable instructional strategies (IS) as a promising approach to develop an IS recommender tool for dental students.

    METHODS: A total of 255 dental students in Universiti Malaya completed the modified Index of Learning Styles (m-ILS) questionnaire containing 44 items which classified them into their respective LS. The collected data, referred to as dataset, was used in a decision tree supervised learning to automate the mapping of students' learning styles with the most suitable IS. The accuracy of the ML-empowered IS recommender tool was then evaluated.

    RESULTS: The application of a decision tree model in the automation process of the mapping between LS (input) and IS (target output) was able to instantly generate the list of suitable instructional strategies for each dental student. The IS recommender tool demonstrated perfect precision and recall for overall model accuracy, suggesting a good sensitivity and specificity in mapping LS with IS.

    CONCLUSION: The decision tree ML empowered IS recommender tool was proven to be accurate at matching dental students' learning styles with the relevant instructional strategies. This tool provides a workable path to planning student-centered lessons or modules that potentially will enhance the learning experience of the students.

    Matched MeSH terms: Decision Trees
  18. Jinap S, Ali AA, Man YB, Suria AM
    Int J Food Sci Nutr, 2000 Nov;51(6):489-99.
    PMID: 11271851
    Dark chocolates filled with palm mid-fraction (PMF) were stored at different temperatures to evaluate the physical and chemical changes. Storage at low temperature (18 degrees C) reduces the PMF migration to negligible extent. Higher storage temperatures (30 and 35 degrees C) increased the PMF migration from the filling centre into the chocolate coating. As a consequence of fat migration, fatty acid composition, triglyceride composition, hardness, solid fat content, melting point and polymorphic structure changed, leading to bloom formation, which started by fat migration and was influenced by recrystallization tendency within the chocolate coating.
    Matched MeSH terms: Trees*
  19. Thiry V, Stark DJ, Goossens B, Slachmuylder JL, Vercauteren Drubbel R, Vercauteren M
    Folia Primatol., 2016;87(3):180-196.
    PMID: 27728905
    The choice of a sleeping site is crucial for primates and may influence their survival. In this study, we investigated several tree characteristics influencing the sleeping site selection by proboscis monkeys (Nasalis larvatus) along Kinabatangan River, in Sabah, Malaysia. We identified 81 sleeping trees used by one-male and all-male social groups from November 2011 to January 2012. We recorded 15 variables for each tree. Within sleeping sites, sleeping trees were taller, had a larger trunk, with larger and higher first branches than surrounding trees. The crown contained more mature leaves, ripe and unripe fruits but had vines less often than surrounding trees. In addition, in this study, we also focused on a larger scale, considering sleeping and non-sleeping sites. Multivariate analyses highlighted a combination of 6 variables that revealed the significance of sleeping trees as well as surrounding trees in the selection process. During our boat surveys, we observed that adult females and young individuals stayed higher in the canopy than adult males. This pattern may be driven by their increased vulnerability to predation. Finally, we suggest that the selection of particular sleeping tree features (i.e. tall, high first branch) by proboscis monkeys is mostly influenced by antipredation strategies.
    Matched MeSH terms: Trees*
  20. Mohd Amiruddin Kamarulzaidi, Zulkifli Mohd. Yusoff MY, Abdul Majid Mohamed, Durriyyah Sharifah Hasan Adli
    Sains Malaysiana, 2016;45:215-220.
    As a natural anti-oxidant source, Tualang honey, produced by wild bees nesting on the Tualang tree (Koompassia excelsa) is expected to have positive influence on health, including memory. This study investigated the effect of Tualang honey on the cell count of memory formation related hippocampal pyramidal neuron and on spatial memory performance (SMP) of rats using the radial arm maze (RAM). Sprague Dawley male rats (n=24), 7-8 weeks old were divided into two groups; experimental group group force-fed 1 mL/100 g body weight with 70% honey (HG); and the control group with 0.9% saline (CG) for 12 weeks. Nissl staining technique (with cresyl violet) was employed for neurohistological analysis of the hippocampal tissue. Six randomly selected rats from each group were used for the neuronal soma counting of pyramidal cell layer CA1, CA3a and CA3c regions. Two-way ANOVA analysis showed positively significant differences between treatment and control groups for SMP comparison of working memory and reference memory components, as well as the number of pyramidal neurons. Hence, this positive effects of Tualang honey, as demonstrated behaviorally and neurohistologically, supported report that Tualang honey could improve memory and deter hippocampal morphological impairments; possibly due to its high anti-oxidant properties.
    Matched MeSH terms: Trees
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