Jatropha curcas L. or the physic nut is a monoecious shrub belonging to the Euphorbiaceae family. The plant is an ideal feedstock for biodiesel production; oil-rich seed (37-42%), has a broad range of growth habitat such as arid, semi-arid and tropical and a relatively feasible process for conversion of crude oil into biodiesel. The major constraint affecting the success of large-scale J. curcas plantation is seed yield inconsistency. Numerous research projects conducted on J. curcas with integrated genetic, genomic and transcriptomic approaches have been applied on the leaf, apical meristem, flower, root and fruit tissues. However, to date, no genomics data of J. curcas shoot system are publicly available, despite its importance in understanding flowering, fruiting and seed set qualities targeted for yield improvement. Here, we present eighteen sets of shoot and inflorescence transcriptomes generated from J. curcas plants with contrasting yields. Raw reads of the RNA-seq data are found in NCBI׳s Sequence Read Archive (SRA) database with the accession number SRP090662 (https://www.ncbi.nlm.nih.gov/sra/?term=SRP090662). This transcriptomic data could be integrated with the present genomic resources for in depth understanding of J. curcas reproductive system.
Effects of different doses of fertilizers on growth and yield components of biodiesel plant (Jatropha curcas L.), was
made in the prevailing environment of University of Science and Technology Bannu. The experiment was carried out in
randomized complete block design (RCBD) with three replications. Nitrogen, phosphorus and potassium were applied
in the form of urea, single super phosphate and potash in the shape of combined NPK, respectively, during sprouting
of leaves and thereafter with each irrigation in split doses. The analysis of variance for number of branches per plant
showed significant results indicated in ANOVA. Significantly the number of primary branches per plant 8.07 was recorded
in T4 with the application of dose of (N P K: 2507.5 gm: 1091.5 gm: 501.5 gm). Maximum No. of secondary branches
per plant (9.100) were recorded in T1 especially at both plots. Flower per inflorescence showed that maximum value
(122.810) was recorded in T5 of especially at both plots. Inflorescence plant-1 showed that maximum value (39.477) were
recorded in T1 and minimum value were noted as (12.733) at T3 on both the flats. The data for fruits per plant showed
that maximum value (143.300) was recorded in T1. The seed index, which was the output of the aim of this research work,
reflects highly significant differences in mean value observed for both subplots. Mean values showed that maximum seeds
weight 45.86 was recorded in T1 of especially at both plots while low seed index was noted as 22.84 at T5 (N: 3400 gm,
P: 1480 gm, K: 680 gm) at both the subplots.
Thrips cause considerable economic loss to mango, Mangifera indica L., in Penang, Malaysia. Three nondestructive sampling techniques--shaking mango panicles over a moist plastic tray, washing the panicles with ethanol, and immobilization of thrips by using CO2--were evaluated for their precision to determine the most effective technique to capture mango flower thrips (Thysanoptera: Thripidae) in an orchard located at Balik Pulau, Penang, Malaysia, during two flowering seasons from December 2008 to February 2009 and from August to September 2009. The efficiency of each of the three sampling techniques was compared with absolute population counts on whole panicles as a reference. Diurnal flight activity of thrips species was assessed using yellow sticky traps. All three sampling methods and sticky traps were used at two hourly intervals from 0800 to 1800 hours to get insight into diurnal periodicity of thrips abundance in the orchard. Based on pooled data for the two seasons, the CO2 method was the most efficient procedure extracting 80.7% adults and 74.5% larvae. The CO2 method had the lowest relative variation and was the most accurate procedure compared with the absolute method as shown by regression analysis. All collection techniques showed that the numbers of all thrips species in mango panicles increased after 0800 hours, reaching a peak between 1200 and 1400 hours. Adults thrips captured on the sticky traps were the most abundant between 0800-1000 and 1400-1600 hours. According to results of this study, the CO2 method is recommended for sampling of thrips in the field. It is a nondestructive sampling procedure that neither damages flowers nor diminishes fruit production. Management of thrips populations in mango orchards with insecticides would be more effectively carried out during their peak population abundance on the flower panicles at midday to 1400 hours.
A cross between IR64 (high-yielding but drought-susceptible) and Aday Sel (drought-tolerant) rice cultivars yielded a stable line with enhanced grain yield under drought screening field trials at International Rice Research Institute. The major effect qDTY4.1 drought tolerance and yield QTL was detected in the IR77298-14-1-2-10 Backcrossed Inbred Line (BIL) and its IR87705-7-15-B Near Isogenic Line (NIL) with 93.9% genetic similarity to IR64. Although rice yield is extremely susceptible to water stress at reproductive stage, currently, there is only one report on the detection of drought-responsive microRNAs in inflorescence tissue of a Japonica rice line. In this study, more drought-responsive microRNAs were identified in the inflorescence tissues of IR64, IR77298-14-1-2-10 and IR87705-7-15-B via next-generation sequencing. Among the 32 families of inflorescence-specific non-conserved microRNAs that were identified, 22 families were up-regulated in IR87705-7-15-B. Overall 9 conserved and 34 non-conserved microRNA families were found as drought-responsive in rice inflorescence with 5 conserved and 30 non-conserved families induced in the IR87705-7-15-B. The observation of more drought-responsive non-conserved microRNAs may imply their prominence over conserved microRNAs in drought response mechanisms of rice inflorescence. Gene Ontology annotation analysis on the target genes of drought-responsive microRNAs identified in IR87705-7-15-B revealed over-representation of biological processes including development, signalling and response to stimulus. Particularly, four inflorescence-specific microRNAs viz. osa-miR5485, osa-miR5487, osa-miR5492 and osa-miR5517, and two non-inflorescence specific microRNAs viz. osa-miR169d and osa-miR169f.2 target genes that are involved in flower or embryonic development. Among them, osa-miR169d, osa-miR5492 and osa-miR5517 are related to flowering time control. It is also worth mentioning that osa-miR2118 and osa-miR2275, which are implicated in the biosynthesis of rice inflorescence-specific small interfering RNAs, were induced in IR87705-7-15-B but repressed in IR77298-14-1-2-10. Further, gene search within qDTY4.1 QTL region had identified multiple copies of NBS-LRR resistance genes (potential target of osa-miR2118), subtilisins and genes implicated in stomatal movement, ABA metabolism and cuticular wax biosynthesis.
A new flavanone derivative, malaysianone A (1), four prenylated flavanones, 6-prenyl-3'-methoxyeriodictyol (2), nymphaeol B (3), nymphaeol C (4) and 6-farnesyl-3',4',5,7-tetrahydroxyflavanone (5), and two coumarins, 5,7-dihydroxycoumarin (6) and scopoletin (7), were isolated from the dichloromethane extract of the inflorescences of Macaranga triloba. The structures of these compounds were elucidated based on spectroscopic methods including nuclear magnetic resonance (NMR-1D and 2D), UV, IR and mass spectrometry. The cytotoxic activity of the compounds was tested against several cell lines, with 5 inhibiting very strongly the growth of HeLa and HL-60 cells (IC(50): 1.3 μg/ml and 3.3 μg/ml, respectively). Compound 5 also showed strong antiplasmodial activity (IC(50): 0.06 μM).