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Fulltext A new gall crab species (Brachyura, Cryptochiridae) associated with the free-living coral Trachyphylliageoffroyi (Scleractinia, Merulinidae)

van der Meij SE

Zookeys, 2015.
PMID: 25987871 DOI: 10.3897/zookeys.500.9244

A new species of gall crab is described from the free-living stony coral Trachyphylliageoffroyi. Specimens were collected during field work in Lembeh Strait (Indonesia) and off Kudat (Malaysian Borneo). This new species, here named Lithoscaptussemperi sp. n., is the ninth species assigned to the genus. It can be separated from its congeners by not having the internal orbital angle extending beyond the external orbital angle, and by the stout female P2 merus with prominent distomesial projection. In addition, the carapace surface appears smooth, despite having small tubercles on the anterior half, and is without noticeable spines, other than those on the frontal margin. The distinctive carapace pattern in life is a diagnostic character in male specimens.

Matched MeSH terms: Anthozoa
Fulltext Quantitative dataset of shallow water reef in Pulau Bidong, Southern of South China sea during pre and post of tropical storm (Pabuk - January 2019)

Bachok Z, Safuan CDM, Roseli NH, Akhir MF

Data Brief, 2020 Oct;32:106182.
PMID: 32923531 DOI: 10.1016/j.dib.2020.106182

This article provides raw datasets of the coral reefs status in Pulau Bidong, southern of South China Sea before and after being strike by the tropical storm Pabuk on January 2019. Data were collected using a rapid coral survey method called Coral Video Transect (CVT) technique. The data were collected along a 100 m transect line set up parallel to the shoreline and at a constant depth. In total, eight transects were surveyed during both periods (pre - August 2016, post - March 2019). Back in laboratory, the footage was then extracted into non-overlapping frames or still images prior to image analysis using Coral Point Count with Excel Extension (CPCe) software. The benthic coral reefs relative percentage cover was automatically generated after the image analysis and represented by five major categories; live coral (C), algae (ALG), other invertebrates (OT), dead coral (DC), and sand silt and rock (SR). Live coral cover was identified up to the genus level. This raw dataset was used in this article. The data provided in this article could be of significant use for future studies especially on coral recovery after the natural disturbances. It can provide a baseline assessment especially for coral reefs management as well as to comprehend changes in coral health status in the face of natural and anthropogenic disturbances. The data presented here support the information in the article Safuan et al. (2020).

Matched MeSH terms: Anthozoa
Fulltext Coral reef fish population in the western extremity of the Coral Triangle

B. Mabel Manjaji Matsumoto, Muhammad Ali Syed Hussein, Yee, Jean-Chai

Borneo Journal of Marine Science and Aquaculture, 2018;2(1):1-8.
MyJurnal

The central and north west coast of Sabah lies along the western extremity of the Coral Triangle, within which are situated several marine protected areas (MPAs). In the present study we determined in situ coral reef fish populations in several localities along the west coast of Sabah, by exploring species abundance, richness and diversity of ten economically important fish species. The underwater surveys were conducted from May to December 2015. During this eight- month period, surveys at each site were undertaken once every two months. Dives were conducted during the daylight hours. A total of 171 individuals from the targeted fish species were enumerated from the 349 still images and 220 minutes of video footage. Abundance was observed mainly in the semi-protected MPA (n=110) with only one fish species recorded with more than 2 individuals at protected MPA and unprotected sites. We observed a correlation between fish species richness and coral topographic complexity, with study sites at the semi-protected MPA having the most complex topography landscape, and accordingly recording the highest Shannon-Wiener index (H= 2.85). Higher abundance recorded at study sites in the unprotected sites and semi-protected MPA indicate that such areas could potentially become de facto MPAs. A long-term monitoring, assessment and evaluation of the multiple degrees of variables involved such as length-weight relationship, type of habitat, variation in depth, and species behaviour are recommended in order to understand better the relationship and dynamics between these variables.

Matched MeSH terms: Anthozoa
Social-environmental drivers inform strategic management of coral reefs in the Anthropocene

Darling ES, McClanahan TR, Maina J, Gurney GG, Graham NAJ, Januchowski-Hartley F, et al.

Nat Ecol Evol, 2019 Sep;3(9):1341-1350.
PMID: 31406279 DOI: 10.1038/s41559-019-0953-8

Without drastic efforts to reduce carbon emissions and mitigate globalized stressors, tropical coral reefs are in jeopardy. Strategic conservation and management requires identification of the environmental and socioeconomic factors driving the persistence of scleractinian coral assemblages-the foundation species of coral reef ecosystems. Here, we compiled coral abundance data from 2,584 Indo-Pacific reefs to evaluate the influence of 21 climate, social and environmental drivers on the ecology of reef coral assemblages. Higher abundances of framework-building corals were typically associated with: weaker thermal disturbances and longer intervals for potential recovery; slower human population growth; reduced access by human settlements and markets; and less nearby agriculture. We therefore propose a framework of three management strategies (protect, recover or transform) by considering: (1) if reefs were above or below a proposed threshold of >10% cover of the coral taxa important for structural complexity and carbonate production; and (2) reef exposure to severe thermal stress during the 2014-2017 global coral bleaching event. Our findings can guide urgent management efforts for coral reefs, by identifying key threats across multiple scales and strategic policy priorities that might sustain a network of functioning reefs in the Indo-Pacific to avoid ecosystem collapse.

Matched MeSH terms: Anthozoa
Fulltext Checklist of the coral fish fauna of Xisha Islands, China

Qiu S, Chen B, Du J, Loh KH, Liao J, Liu X, et al.

Biodivers Data J, 2021;9:e63945.
PMID: 33732033 DOI: 10.3897/BDJ.9.e63945

Background: The Xisha Islands are composed of the Yongle Islands and the Xuande Islands in Hainan Province, China. It has one of the highest species diversity in the world and is also a typical oceanic distribution area of coral reefs globally. The ichthyofauna of the Xisha Islands were recorded by underwater visual census in May 2019 and July 2020. The survey data were combined with previous records of species into the checklist of the Xisha Islands presented herein. A total of 691 species, belonging to 24 orders and 97 families, was recorded. The major families were Labridae, Pomacentridae, Serranidae, Chaetodontidae, Hexanchidae, Lutjanidae, Scaridae, Gobiidae, Scorpaenidae and Carangidae. In this study, the Coral Fish iversity Index (CFDI) of six families (Chaetodontidae, Pomacanthidae, Pomacentridae, Labridae, Scaridae and Acanthuridae) was 229, indicating 756 coral fishes. In terms of the IUCN Red List, one species is Critically Endangered (Glyphis gangeticus), six species are Endangered (Stegostoma fasciatum, Aetomylaeus maculatus, Aetomylaeus vespertilio, Epinephelus akaara, Cheilinusundulatus sp. and Xiphias gladius), 16 species are Vulnerable, and 13 species are Near Threatened in the Xisha Archipelago, so conservation should be strengthened in this area in the future.
New information: One species is a new record for China (Dischistodus pseudochrysopoecilus) and 23 species are newly found in the Xisha Islands.

Matched MeSH terms: Anthozoa
Fulltext Reef foraminifera as bioindicators of coral reef health in southern South China Sea

A'ziz ANA, Minhat FI, Pan HJ, Shaari H, Saelan WNW, Azmi N, et al.

Sci Rep, 2021 Apr 26;11(1):8890.
PMID: 33903697 DOI: 10.1038/s41598-021-88404-3

Pulau Tioman is a famous tourist island off Peninsular Malaysia with beautiful coral reefs. This study aims to assess the health of the coral reefs surrounding Pulau Tioman based on the application of the Foraminifera in Reef Assessment and Monitoring Index (FI). Ten sampling sites around Pulau Tioman were studied with a total of 30 samples. Eight orders, 41 families, 80 genera, and 161 species of benthic foraminifera were identified. The agglutinated type of foraminifera constituted 2-8% of the total assemblages. Calcareous hyaline and porcelaneous groups represented 79% and 19% of the total assemblages, respectively. Symbiont-bearing taxa were the most common foraminifera. The results indicate that most of the sampling sites are conducive for coral reef growth with good recoverability from future stress to the ecosystem. However, several areas with higher coastal development and tourism have reduced water and sediment quality. Therefore, the limit on the number of visitors and tourists should be revised to enable coral growth and health. The FI values in this study showed a positive correlation with good water qualities and a negative correlation with organic matter enrichment. The FI is a good measure to assess the health of a coral reef and can be applied to other reef ecosystems around Malaysia.

Matched MeSH terms: Anthozoa
Fulltext Effects of substratum and depth on benthic harmful dinoflagellate assemblages

Lee LK, Lim ZF, Gu H, Chan LL, Litaker RW, Tester PA, et al.

Sci Rep, 2020 07 09;10(1):11251.
PMID: 32647125 DOI: 10.1038/s41598-020-68136-6

Microhabitats influence the distribution and abundance of benthic harmful dinoflagellate (BHAB) species. Currently, much of the information on the relationships between BHABs and microhabitat preferences is based on non-quantitative anecdotal observations, many of which are contradictory. The goal of this study was to better quantify BHAB and microhabitat relationships using a statistically rigorous approach. Between April 2016 to May 2017, a total of 243 artificial substrate samplers were deployed at five locations in the Perhentian Islands, Malaysia while simultaneous photo-quadrat surveys were performed to characterize the benthic substrates present at each sampling site. The screen samplers were retrieved 24 h later and the abundances of five BHAB genera, Gambierdiscus, Ostreopsis, Coolia, Amphidinium, and Prorocentrum were determined. Substrate data were then analyzed using a Bray-Curtis dissimilarity matrix to statistically identify distinct microhabitat types. Although BHABs were associated with a variety of biotic and abiotic substrates, the results of this study demonstrated differing degrees of microhabitat preference. Analysis of the survey results using canonical correspondence analysis explained 70.5% (horizontal first axis) and 21.6% (vertical second axis) of the constrained variation in the distribution of various genera among microhabitat types. Prorocentrum and Coolia appear to have the greatest range being broadly distributed among a wide variety of microhabitats. Amphidinium was always found in low abundances and was widely distributed among microhabitats dominated by hard coral, turf algae, sand and silt, and fleshy algae and reached the highest abundances there. Gambierdiscus and Ostreopsis had more restricted distributions. Gambierdiscus were found preferentially associated with turf algae, hard coral and, to a lesser extent, fleshy macroalgae microhabitats. Ostreopsis, almost always more abundant than Gambierdiscus, preferred the same microhabitats as Gambierdiscus and were found in microbial mats as well. With similar habitat preferences Ostreopsis may serve as an indicator organism for the presence of Gambierdiscus. This study provides insight into how BHAB-specific microhabitat preferences can affect toxicity risks.

Matched MeSH terms: Anthozoa
Fulltext COPEPOD AND NEMATODE PARASITES OF THE THREE-SPOTTED DAMSELFISH Dascyllus trimaculatus FROM BIDONGISLAND, TERENGGANU

PEI YING LEE, YUSRI YUSOF, MELISSA BEATA MARTIN

UMT Journal of Undergraduate Research, 2021;3(1):7-16.
MyJurnal

This study focuses on the parasites in Dascyllus trimaculatus fish in Bidong Island. Though D. trimaculatus is a common reef fish, there is lack on parasites studies of this fish in Malaysia. The objectives of this study are to identify metazoan parasites and analyse the prevalence and mean intensity the parasites in D. trimaculatus. Sampling was randomly conducted on a coral colony of 100 meters within a 15m depth at Pantai Pasir Cina,BidongIsland.ThisresearchresultedintheidentificationofacopepodLernaeocera branchialis and a nematode from the family Camallanidae. The copepods collected in this study infected 20 out of 42 D. trimaculatus specimens, whereas the nematode-like parasites collected infected 18 of out of 42 D. trimaculatus. All copepods found in the gills of D. trimaculatus had a prevalence of 4.95 and mean intensity of 47.62%, while the nematode-like parasite, which were found in the brain, had 2.72 prevalence and 42.86% mean intensity. This elucidates that both parasites are categorised as having light levelbut common frequency of infection, and the current IUCN status of D. trimaculatus has not been reported to be harmedby parasites. Though the mean intensity of both parasites isnot harmful, the prevalence are concerning and might increase in the future, with further incorporation and monitoring of climate change factors that may affect the damselfish.

Matched MeSH terms: Anthozoa
Fulltext ESTIMATION OF CORAL RUBBLE QUANTITY USING EDGE DETECTION AND MORPHOLOGICAL-BASED METHODS

MUHAMMAD SUZURI HITAM, NURSYAHIRAH HAFIZ, ZAINUDDIN BACHOK, ZAINUDDIN BACHOK, MOHD SAFUAN CHE DIN

UMT Journal of Undergraduate Research, 2019;1(3):105-119.
MyJurnal

Reef rubble representsthe broken components of the coraland reefstructure which could be in the form of dead,broken or other fragmented coral.The process to estimate the distribution of reef rubble is currently done manually and thus takesa long timeto completeand is laborious. This paper presentsan image-processing-basedmethod to estimate the distribution of reef rubbles in a coral reef environmentfrom a still image. The method is basically a series of image processing steps includingimage complement, image binarization, edgedetection, smoothing by Weiner filter and followed by erosion and dilation process.The experimentalresults showedthat the system wasable to roughly estimate the distribution of reef rubble.

Matched MeSH terms: Anthozoa
Fulltext ESTIMATION OF SAND DISTRIBUTION IN CORAL REEF ENVIRONMENT USING COLOURSEGMENTATION AND COLOURTHRESHOLDING METHODS

PAULEEN ONG, MUHAMMAD SUZURI HITAM, ZAINUDDIN BACHOK, ZAINUDDIN BACHOK, MOHD SAFUAN CHE DIN

UMT Journal of Undergraduate Research, 2019;1(3):96-104.
MyJurnal

At present, marine scientists employ manual method to estimate the components in coral reef environment,where Coral Point Count with Excel extensions (CPCe) software is used to determine the coral reef components and substrate coverage. This manual processis laboriousand time consuming,and needsexpertsto conduct the survey. In this paper, a prototype for estimating the distribution of sand cover in coral reef environment from still images by using colourextraction methods was introduced. The coloursegmentation called delta E was used to calculate the colourdifference between two coloursamples. Another method used wascolourthresholdby setting the range of sand colourpixels. Thesystem was developed by using a MATLAB software withimage processing toolbox. The developed system was semi-automatic computer-based system that can be used by researcherseven with little knowledge and experience to estimatethepercentage of sand coveragein coral reef still images.

Matched MeSH terms: Anthozoa
Fulltext Quantification of coral sperm collected during a synchronous spawning event

Teo A, Guest JR, Neo ML, Vicentuan K, Todd PA

PeerJ, 2016;4:e2180.
PMID: 27478697 DOI: 10.7717/peerj.2180

Most studies of coral reproductive biology to date have focused on oocyte numbers and sizes. Only one (ex situ) study has enumerated sperm numbers, even though these data have multiple potential applications. We quantified total coral sperm and eggs per gamete bundle collected from six species in situ during a synchronous spawning event in Singapore. Egg-sperm bundles were captured midwater as they floated towards the surface after being released by the colony. For each sample, a semi-transparent soft plastic bottle was squeezed and released to create a small suction force that was used to 'catch' the bundles. This technique provided several advantages over traditional methods, including low cost, ease of use, no diving prior to the night of collection needed, and the ability to target specific areas of the colony. The six species sampled were Echinophyllia aspera, Favites abdita, F. chinensis, Merulina ampliata, M. scabricula and Platygyra pini. The mean number of sperm packaged within one egg-sperm bundle ranged from 2.04 × 10(6) to 1.93 × 10(7). The mean number of eggs per egg-sperm bundle ranged from 26.67 (SE ± 3.27) to 85.33 (SE ± 17.79). These data are critical for fertilisation success models, but the collection technique described could also be applied to studies requiring in situ spawning data at the polyp level.

Matched MeSH terms: Anthozoa
Fulltext Spectroscopic studies of cow femurs and Porites species coral from Sabah

Fadhlia Zafarina Zakaria, Fauziah Abdul Aziz, Thevarajah, Nahulan

Journal of Nuclear and Related Technologies, 2007;2007(1):181-184.
MyJurnal

Some cortical bone specimens from the femurs of adult cows and sea coral of Porites species were studied by using Fourier Transform Infrared Spectroscopy, FTIR. Carbonate were shown to be present by indication of C-O stretch found between 1510-1410 cm -1 in both cortical bone and Porites. Based on the comparison of the relative intensity of CO3 2- bands with respect to the PO4 3- bands, peak intensity of Porites was found to be higher than peak intensity of cortical bone at carbonate band. This explains that Porites skeleton is made up of CaCO3 while bone consists of a mineral, hydroxyapatite Ca5(PO4)3OH with the present of carbonate ions, typically from 3 to 7 wt%.

Matched MeSH terms: Anthozoa
Fulltext Species diversity and abundance of Euphylliidae (Cnidaria: Anthozoa: Scleractinia) corals in Tioman, Redang and Payar Islands, Peninsular Malaysia

Shahbudin Saad, Fikri Ahmad Khodzori

Borneo Journal of Marine Science and Aquaculture, 2017;1(1):51-56.
MyJurnal

The number of endangered coral species is increasing over the past decades due to multiple stresses and threats. Euphylliidae corals are among the species heavily targeted for the marine aquarium trade due to their colourful appearance and aesthetic importance. However, their distribution in Peninsular Malaysia has not been thoroughly investigated. Present study aims to investigate the diversity and abundance patterns of euphylliid species at 36 reef sites in Marine Protected Areas of Tioman, Redang and Payar Islands. Video transect surveyed a total of 671 euphylliids individuals belonging to six species from three genera. The diversity and evenness indices of euphylliids were significantly higher (P

Matched MeSH terms: Anthozoa
Fulltext Urban coral reefs: Degradation and resilience of hard coral assemblages in coastal cities of East and Southeast Asia

Heery EC, Hoeksema BW, Browne NK, Reimer JD, Ang PO, Huang D, et al.

Mar Pollut Bull, 2018 Oct;135:654-681.
PMID: 30301085 DOI: 10.1016/j.marpolbul.2018.07.041

Given predicted increases in urbanization in tropical and subtropical regions, understanding the processes shaping urban coral reefs may be essential for anticipating future conservation challenges. We used a case study approach to identify unifying patterns of urban coral reefs and clarify the effects of urbanization on hard coral assemblages. Data were compiled from 11 cities throughout East and Southeast Asia, with particular focus on Singapore, Jakarta, Hong Kong, and Naha (Okinawa). Our review highlights several key characteristics of urban coral reefs, including "reef compression" (a decline in bathymetric range with increasing turbidity and decreasing water clarity over time and relative to shore), dominance by domed coral growth forms and low reef complexity, variable city-specific inshore-offshore gradients, early declines in coral cover with recent fluctuating periods of acute impacts and rapid recovery, and colonization of urban infrastructure by hard corals. We present hypotheses for urban reef community dynamics and discuss potential of ecological engineering for corals in urban areas.

Matched MeSH terms: Anthozoa
Coral reef and associated habitat mapping using ALOS satellite imagery

Mustapha M, Lihan T, Khalid L

Sains Malaysiana, 2014;43:1363-1371.

Coral reefs are rich in biodiversity and ecosystem services. However increase in degradation are still occurring at an alarming rate. In management of this ecosystem, determination of its spatial distribution is of importance. Satellite imageries can be used to map distribution extent using spectral characteristics which is a fundamental parameter in mapping. The aims of this study were to determine the spectral characteristics of corals and associated habitats and to map its spatial distribution using 2009 ALOS advanced visible and near infrared radiometer type 2 (AVNIR-2) satellite imagery. Results indicated that coral and habitats surrounding the area display variation in the spectral characteristics magnitude but displays similar spectral curve. Spectral characteristics from the corals and surrounding habitats were determined by presence of benthic microalgae and calcium carbonate. Maximum likelihood classification on the image produced five main classes. Spatial distribution of coral and associated habitats indicated five main zones which are sandy shore zone, sandy intertidal zone, seagrass zone, coral/submerged sandy zone and rocky zone. Distribution of live corals indicated coverage of 0.54 km2, sea grass (0.94 km2), sandy bottom (1.31 km2) and rocky shores (0.19 km2). The results of this study indicated that ALOS satellite data was able to determine variation in spectral characteristics of coral reefs and other habitats thus is capable of mapping the ecosystems spatial distribution.

Matched MeSH terms: Anthozoa
Fulltext The Coral Triangle Atlas: an integrated online spatial database system for improving coral reef management

Cros A, Ahamad Fatan N, White A, Teoh SJ, Tan S, Handayani C, et al.

PLoS One, 2014;9(6):e96332.
PMID: 24941442 DOI: 10.1371/journal.pone.0096332

In this paper we describe the construction of an online GIS database system, hosted by WorldFish, which stores bio-physical, ecological and socio-economic data for the 'Coral Triangle Area' in South-east Asia and the Pacific. The database has been built in partnership with all six (Timor-Leste, Malaysia, Indonesia, The Philippines, Solomon Islands and Papua New Guinea) of the Coral Triangle countries, and represents a valuable source of information for natural resource managers at the regional scale. Its utility is demonstrated using biophysical data, data summarising marine habitats, and data describing the extent of marine protected areas in the region.

Matched MeSH terms: Anthozoa/physiology*
Tissue-engineered bone via seeding bone marrow stem cell derived osteoblasts into coral: a rat model

Al-Salihi KA

Med J Malaysia, 2004 May;59 Suppl B:200-1.
PMID: 15468887

In the present study, natural coral of porites species was used as scaffold combined with in vitro expanded bone marrow stem cell derived osteoblasts (BMSC-DO), to develop a tissue-engineered bone graft in a rat model. Coral was molded into the shape of rat mandible seeded with 5x10(6) /ml BMSC-DO subsequently implanted subcutaneously in the back of 5 week Sprague dawely rats for 3 months. Coral alone was implanted as a control. The implants were harvest and processed for gross inspection and histological observations. The results showed that newly bone grafts were successfully formed coral seeded with cells group showed smooth highly vascularized like bone tissue. Histological sections revealed mature bone formation and lots of blood vessel, the bone formation occurred in the manner resemble intramembraneous bone formation. This study demonstrates that coral can be use as a suitable scaffold material for delivering bone marrow mesenchymal stem cells in tissue engineering.

Matched MeSH terms: Anthozoa*
Gross, radiology and ultrasonographic evaluation of coral post-implantation in sheep femur

Fadilah A, Zuki AB, Loqman MY, Zamri-Saad M, Norimah Y, Asnah H

Med J Malaysia, 2004 May;59 Suppl B:178-9.
PMID: 15468876

The study was carried out to evaluate macroscopically the ability of coral to repair a large size bone defect. A total 12 adult, male sheep were used in the study. The large bone defect (2.5cm x 0.5cm x 0.5cm) was created surgically on the left proximal femur and replaced by a block of coral (Porites sp.). Radiographs were obtained immediately after surgery and at 2, 4, 8 and 12 weeks post-implantation. Ultrasonographic examinations were carried out every 2 weeks after implantation up to 12 weeks using ultrasound machine (TOSHIBA Capasee II) connected with 7MHz frequency transducer. The sheep were euthanased at 2, 4, 8, and 12 weeks post-implantation and the bone examined grossly. Both ultrasonographs and radiographs taken at 8 and 12 weeks showed that the implants had been resorbed and left the space that much reduced in size. There was no sign of implant rejection observed in all animals. The results showed that processed coral has potential to become bone substitute for reconstructive bone surgery.

Matched MeSH terms: Anthozoa*
In vitro cytotoxicity evaluation of biomaterials on human osteoblast cells CRL-1543; hydroxyapatite, natural coral and polyhydroxybutarate

Shamsuria O, Fadilah AS, Asiah AB, Rodiah MR, Suzina AH, Samsudin AR

Med J Malaysia, 2004 May;59 Suppl B:174-5.
PMID: 15468874

The aim of this study was to evaluate the in vitro cytotoxicity of biomaterials; Hydroxyapatite (HA), Natural coral (NC) and Polyhydroxybutarate (PHB). Three different materials used in this study; HA (Ca10(PO4)6(OH)2), NC (CaCO3) and PHB (Polymer) were locally produced by the groups of researcher from Universiti Sains Malaysia. The materials were separately extracted in the complete culture medium (100mg/ml) for 72h and introduced to the osteoblast cells CRL-1543. The viability of osteoblast CRL-1543 cultivated with these extraction materials after 72h incubation period was compared to negative control with neutral red assay by using spectrophotometer at 540nm. The results showed the non-cytotoxicity of the materials. After 72h of incubation period, HA showed 123% viable cells, NC was 99.43% and PHB was 176.75%. In this study, cytotoxicity test dealt mainly with the substances that leached out from the biomaterial. The results obtained showed that the materials were not toxic and also promoted cells growth in the sense of biofunctionality.

Matched MeSH terms: Anthozoa*
Fulltext The genetic intractability of Symbiodinium microadriaticum to standard algal transformation methods

Chen JE, Barbrook AC, Cui G, Howe CJ, Aranda M

PLoS One, 2019;14(2):e0211936.
PMID: 30779749 DOI: 10.1371/journal.pone.0211936

Modern transformation and genome editing techniques have shown great success across a broad variety of organisms. However, no study of successfully applied genome editing has been reported in a dinoflagellate despite the first genetic transformation of Symbiodinium being published about 20 years ago. Using an array of different available transformation techniques, we attempted to transform Symbiodinium microadriaticum (CCMP2467), a dinoflagellate symbiont of reef-building corals, with the view to performing subsequent CRISPR-Cas9 mediated genome editing. Plasmid vectors designed for nuclear transformation containing the chloramphenicol resistance gene under the control of the CaMV p35S promoter as well as several putative endogenous promoters were used to test a variety of transformation techniques including biolistics, electroporation and agitation with silicon carbide whiskers. Chloroplast-targeted transformation was attempted using an engineered Symbiodinium chloroplast minicircle encoding a modified PsbA protein expected to confer atrazine resistance. We report that we have been unable to confer chloramphenicol or atrazine resistance on Symbiodinium microadriaticum strain CCMP2467.

Matched MeSH terms: Anthozoa/microbiology

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