Displaying publications 81 - 100 of 422 in total

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  1. Austin CM, Tan MH, Croft LJ, Meekan MG, Gan HY, Gan HM
    PMID: 25693694 DOI: 10.3109/19401736.2015.1007348
    The complete mitogenome of the ray Taeniura lymma was recovered from genome skimming using the HiSeq sequencing system. The T. lymma mitogenome has 17,652 base pairs (59.13% A + T content) made up of 13 protein-coding genes, 2 ribosomal subunit genes, 22 transfer RNAs and a 1906 bp non-coding AT-rich region. This mitogenome sequence is the second for a ray from Australian waters, the first for the genus Taeniura and the ninth for the family Dasyatidae.
    Matched MeSH terms: Fishes/genetics*
  2. Idriss AA, Ahmad AK
    Bull Environ Contam Toxicol, 2015 Feb;94(2):204-8.
    PMID: 25564001 DOI: 10.1007/s00128-014-1452-x
    This study examined the concentration of heavy metals in 13 fish species. The results indicated that shellfish species (clams) have the highest metal concentrations, followed by demersal and pelagic fishes. The mean concentration of metals in clams are Zn 88.74 ± 11.98 µg/g, Cu 4.96 ± 1.06 µg/g, Pb 1.22 ± 0.19 µg/g, Cd 0.34 ± 0.04 µg/g dry wt. basis, whereas the same measure in fish tissues was 58.04 ± 18.51, 2.47 ± 1.21, 0.58 ± 0.27 and 0.17 ± 0.08 µg/g dry wt. basis. The concentrations of heavy metals in clams and fish tissues were still lower than the maximum allowable concentrations as suggested by the Malaysian Food Act (1983) and are considered safe for local human consumption.
    Matched MeSH terms: Fishes/metabolism*
  3. Sabullah MK, Sulaiman MR, Abd Shukor MY, Syed MA, Shamaan NA, Khalid A, et al.
    ScientificWorldJournal, 2014;2014:571094.
    PMID: 25401148 DOI: 10.1155/2014/571094
    Crude extract of ChE from the liver of Puntius javanicus was purified using procainamide-sepharyl 6B. S-Butyrylthiocholine iodide (BTC) was selected as the specific synthetic substrate for this assay with the highest maximal velocity and lowest biomolecular constant at 53.49 µmole/min/mg and 0.23 mM, respectively, with catalytic efficiency ratio of 0.23. The optimum parameter was obtained at pH 7.5 and optimal temperature in the range of 25 to 30°C. The effect of different storage condition was assessed where ChE activity was significantly decreased after 9 days of storage at room temperature. However, ChE activity showed no significant difference when stored at 4.0, 0, and -25°C for 15 days. Screening of heavy metals shows that chromium, copper, and mercury strongly inhibited P. javanicus ChE by lowering the activity below 50%, while several pairwise combination of metal ions exhibited synergistic inhibiting effects on the enzyme which is greater than single exposure especially chromium, copper, and mercury. The results showed that P. javanicus ChE has the potential to be used as a biosensor for the detection of metal ions.
    Matched MeSH terms: Fishes/metabolism
  4. Hanafiah MM, Leuven RS, Sommerwerk N, Tockner K, Huijbregts MA
    Environ Sci Technol, 2013 Dec 17;47(24):13934-40.
    PMID: 24251685 DOI: 10.1021/es403870z
    While the ecological impact of anthropogenically introduced exotic species is considered a major threat for biodiversity and ecosystems functioning, it is generally not accounted for in the environmental life cycle assessment (LCA) of products. In this article, we propose a framework that includes exotic species introduction in an LCA context. We derived characterization factors for exotic fish species introduction related to the transport of goods across the Rhine-Main-Danube canal. These characterization factors are expressed as the potentially disappeared fraction (PDF) of native freshwater fish species in the rivers Rhine and Danube integrated over space and time per amount of goods transported (PDF·m(3)·yr·kg(-1)). Furthermore, we quantified the relative importance of exotic fish species introduction compared to other anthropogenic stressors in the freshwater environment (i.e., eutrophication, ecotoxicity, greenhouse gases, and water consumption) for transport of goods through the Rhine-Main-Danube waterway. We found that the introduction of exotic fish species contributed to 70-85% of the total freshwater ecosystem impact, depending on the distance that goods were transported. Our analysis showed that it is relevant and feasible to include the introduction of exotic species in an LCA framework. The proposed framework can be further extended by including the impacts of other exotic species groups, types of water bodies and pathways for introduction.
    Matched MeSH terms: Fishes/physiology
  5. Teo BG, Dhillon SK, Lim LH
    PLoS One, 2013;8(10):e77650.
    PMID: 24204903 DOI: 10.1371/journal.pone.0077650
    In this paper, a digital 3D model which allows for visualisation in three dimensions and interactive manipulation is explored as a tool to help us understand the structural morphology and elucidate the functions of morphological structures of fragile microorganisms which defy live studies. We developed a deformable generic 3D model of haptoral anchor of dactylogyridean monogeneans that can subsequently be deformed into different desired anchor shapes by using direct manipulation deformation technique. We used point primitives to construct the rectangular building blocks to develop our deformable 3D model. Point primitives are manually marked on a 2D illustration of an anchor on a Cartesian graph paper and a set of Cartesian coordinates for each point primitive is manually extracted from the graph paper. A Python script is then written in Blender to construct 3D rectangular building blocks based on the Cartesian coordinates. The rectangular building blocks are stacked on top or by the side of each other following their respective Cartesian coordinates of point primitive. More point primitives are added at the sites in the 3D model where more structural variations are likely to occur, in order to generate complex anchor structures. We used Catmull-Clark subdivision surface modifier to smoothen the surface and edge of the generic 3D model to obtain a smoother and more natural 3D shape and antialiasing option to reduce the jagged edges of the 3D model. This deformable generic 3D model can be deformed into different desired 3D anchor shapes through direct manipulation deformation technique by aligning the vertices (pilot points) of the newly developed deformable generic 3D model onto the 2D illustrations of the desired shapes and moving the vertices until the desire 3D shapes are formed. In this generic 3D model all the vertices present are deployed for displacement during deformation.
    Matched MeSH terms: Fishes/physiology*
  6. Zare D, Muhammad K, Bejo MH, Ghazali HM
    J Chromatogr A, 2012 Sep 21;1256:144-9.
    PMID: 22885043 DOI: 10.1016/j.chroma.2012.07.083
    Urocanic acid (UCA) has been reported to be a mast cell degranulator and has also been suggested as a complementary agent in implicated scombroid fish poisoning. In this research, a new method is described to extract, clean up and perform simultaneous ion-pair chromatographic analysis of trans- and cis-urocanic acid (UCA) in fish samples. UCA was extracted using 0.05 M HCl and protein was removed from the extract by precipitation with 10% trisodium citrate and 10% citric acid. The HPLC method that is developed showed a rapid, precise and sensitive method with short retention time for simultaneous separation of UCA isomers in fish samples. Estimation of trans- and cis-UCA in the muscle of Indian mackerel, tuna and sardine showed that, as expected, no cis-UCA existed in fish muscles and the highest concentration of trans-UCA was found in Indian mackerel with 118.8 mg kg(-1) while the highest concentrations of trans-UCA in tuna and sardine were 12.1 and 17.5 mg kg(-1), respectively.
    Matched MeSH terms: Fishes*
  7. Manoharan B, Sulaimen Z, Omar F, Othman RY, Mohamed SZ, Bhassu S
    Genet. Mol. Res., 2011;10(2):712-6.
    PMID: 21523650 DOI: 10.4238/vol10-2gmr944
    Malaysian arowana (dragonfish; Scleropages formosus) is an ancient osteoglossid fish from southeast Asia. Due to the high demand of the ornamental fish trade and because of habitat loss, the species is close to extinction. We isolated and characterized 10 polymorphic microsatellites of this species, using 5'-anchored PCR. The number of alleles at the 10 microsatellite loci ranged from 2 to 28, with a mean of 7.8/locus. The observed heterozygosity ranged from 0.03 to 0.93 (mean: 0.39), whereas the expected heterozygosity ranged from 0.03 to 0.94 (mean: 0.46). Seven microsatellites deviated from Hardy-Weinberg equilibrium, and three conformed to Hardy-Weinberg equilibrium and were in linkage equilibrium. These 10 novel microsatellites should facilitate studies of genetic diversity and population structure of arowana to help plan actions for the conservation of the indigenous Malaysian arowana.
    Matched MeSH terms: Fishes/genetics*
  8. Baharum SN, Nurdalila AA
    Mol Biol Rep, 2012 May;39(5):5225-32.
    PMID: 22167328 DOI: 10.1007/s11033-011-1320-2
    The most economically important form of aquaculture is fish farming, which is an industry that accounts for an ever increasing share of world fishery production. Molecular markers can be used to enhance the productivity of the aquaculture and fish industries to meet the increasing demand. Molecular markers can be identified via a DNA test regardless of the developmental stage, age or environmental challenges experienced by the organism. The application of 16s and cytochrome b markers has enabled rapid progress in investigations of genetic variability and inbreeding, parentage assignments, species and strain identification and the construction of high resolution genetic linkage maps for aquaculture fisheries. In this review, the advantages of principles and potential power tools of 16s and cytochrome b markers are discussed. Main findings in term of trend, aspects and debates on the reviewed issue made from the model of aquatic species for the benefit of aquaculture genomics and aquaculture genetics research are discussed. The concepts in this review are illustrated with various research examples and results that relate theory to reality and provide a strong review of the current status of these biotechnology topics.
    Matched MeSH terms: Fishes/genetics*
  9. Tan WB, Lim LH
    Folia Parasitol., 2009 Sep;56(3):180-4.
    PMID: 19827361
    One new and three previously described species of Trianchoratus Price et Berry, 1966 were collected from the gills of Channa lucius (Cuvier) and Channa striata (Bloch) from the Bukit Merah Reservoir, Perak and Endau-Rompin, Pahang, Peninsular Malaysia. They are Trianchoratus longianchoratus sp.n., T. malayensis Lim, 1986 and T. pahangensis Lim, 1986 from C. lucius, and T. ophicephali Lim, 1986 from C. striata. The new species differs from the Trianchoratus species hitherto described from channids and anabantoids in having two ventral anchors with a long curved inner root and one dorsal anchor with a curved inner root and lacking an outer root. A table summarizing the known species of heteronchocleidins (Trianchoratus, Eutrianchoratus and Heteronchocleidus) and Sundanonchus reported from fish hosts of different families (Channidae, Helostomatidae, Anabantidae and Osphronemidae) is provided.
    Matched MeSH terms: Fishes/parasitology*
  10. Boxshall GA, Lin CL, Ho JS, Ohtsuka S, Venmathi Maran BA, Justine JL
    Syst Parasitol, 2008 Jun;70(2):81-106.
    PMID: 18427956 DOI: 10.1007/s11230-008-9132-z
    Two new species of the parasitic copepod genus Dissonus Wilson, 1906 are described: D. excavatus n. sp. from the gills of a labrid, Bodianus perditio, and a lutjanid, Macolor niger, collected off New Caledonia and Taiwan, and D. inaequalis n. sp. from a hemiscylliid elasmobranch, Chiloscyllium punctatum, collected off Sarawak (Malaysia) and the Philippines. Material of D. heronensis Kabata, 1966 is described from a balistid host, Pseudobalistes fuscus, off New Caledonia, and this constitutes a new host record for this parasite. D. manteri Kabata, 1966 was collected from four serranid host species off New Caledonia and from one of the same hosts off Taiwan. Two of the hosts from New Caledonia, Plectropomus laevis and Epinephelus cyanopodus, represent new host records. D. pastinum Deets & Dojiri, 1990 was recognised as a new synonym of D. nudiventris Kabata, 1966, so the total number of valid species is now twelve. Material from museum collections of D. nudiventris, D. similis Kabata, 1966 and D. spinifer Wilson, 1906 was re-examined and provided new information which is utilised in a key to all valid species of Dissonus.
    Matched MeSH terms: Fishes/parasitology*
  11. Khandaker MU, Asaduzzaman Kh, Nawi SM, Usman AR, Amin YM, Daar E, et al.
    PLoS One, 2015;10(6):e0128790.
    PMID: 26075909 DOI: 10.1371/journal.pone.0128790
    The environment of the Straits of Malacca receives pollution as a result of various industrial and anthropogenic sources, making systematic studies crucial in determining the prevailing water quality. Present study concerns concentrations of natural radionuclides and heavy metals in marine fish (Rastrelliger kanagurta) collected from the Straits of Malacca, since aquatic stock form an important source of the daily diet of the surrounding populace. Assessment was made of the concentrations of key indicator radionuclides (226Ra, 232Th, 40K) and heavy metals (As, Mn, Fe, Cr, Ni, Zn, Cu, Co, Sr, Al, Hg and Pb) together with various radiation indices linked to the consumption of seafish. The annual effective dose for all detected radionuclides for all study locations has been found to be within UNSCEAR acceptable limits as has the associated life-time cancer risk. The overall contamination of the sampled fish from heavy metals was also found to be within limits of tolerance.
    Matched MeSH terms: Fishes*
  12. Lim LH
    Syst Parasitol, 2003 Jun;55(2):115-26.
    PMID: 12815222
    Four new species of Calydiscoides Young, 1969 are described from three species of nemipterids caught off Kemaman, Terengganu, on the eastern coast of Peninsular Malaysia: C. monogrammae n. sp. from Scolopsis monogramma; C. conus n. sp. from S. magaritifer; C. scolopsidis n. sp. from S. margaritifer and S. monogramma; and C. kemamanensis n. sp. from Pentapodus setosus. The present investigation reveals that the squamodiscs (lamellodiscs) are composed of 10-12 short, complete, interlocking and concentric tubular lamellae. The innermost lamella is attached to a pair of adductor muscles.
    Matched MeSH terms: Fishes/parasitology*
  13. Loke YK, Tan MH
    Med J Malaysia, 1997 Jun;52(2):172-4.
    PMID: 10968077
    A 69-year-old lady who was referred by her general practitioner with a diagnosis of food poisoning developed cardiorespiratory arrest shortly after arriving at the Casualty Department. Cardiac output was successfully restored with resuscitation but she had to be mechanically ventilated due to the absence of any spontaneous respiratory effort. Assessment 24 hours after admission, showed fixed and dilated pupils with brain stem areflexia. Her family was told that the prognosis was hopeless. Surprisingly, her condition rapidly improved a day later and she eventually had a good recovery. Her condition was actually due to severe tetrodotoxin poisoning after eating roe of the puffer fish and it was fortunate that appropriate aggressive resuscitation was instituted to revive the patient from her critical state.
    Matched MeSH terms: Fishes*
  14. Lokman HS
    Arch Int Physiol Biochim Biophys, 1993 Sep-Oct;101(5):253-6.
    PMID: 7508281
    Zooplankton samples were collected from the indigenous tropical brackish water lagoon during the wet monsoon (January and February 1990) and the dry monsoon (April and May 1990). The dominant copepod species in the zooplankton community comprising of Oithona sp (especially O. nana and O. robusta) accounted for more than 70% of the zooplankton in January and was gradually replaced by other zooplanktonic species later in the dry season. The lipid contents in zooplankton varied from 0.18 to 1.04% wet weight or 1.14 to 5.92% dry weight respectively. The major fatty acid contents of the zooplankton showed high concentration of 14:0, 16:0, 18:1, 20:5 omega 3 and 22:6 omega 3 especially in the wet season. It also contained high omega-3 highly unsaturated fatty acid series necessary for the growth of commercial fish larvae. It has a better food value than the normally use food organism, brine shrimp; thus reflecting its potential use as food organism for fish larval rearing.
    Matched MeSH terms: Fishes/growth & development*
  15. Armstrong RW, Eng AC
    Soc Sci Med, 1983;17(20):1559-67.
    PMID: 6635717 DOI: 10.1016/0277-9536(83)90100-4
    The evidence for a hypothesis that eating salted fish is associated with nasopharyngeal carcinoma (NPC) is reviewed. The hypothesis was tested among Malaysian Chinese using a matched case-control design. The kinds of salted fish and patterns of use were also investigated in a control group comprising 100 Chinese, 50 Malay and 50 Indian households. During 1980, in Selangor, Malaysia, interviews with 100 Chinese cases of NPC and 100 non-disease controls indicated that salted fish consumption during childhood was a significant risk (relative risk = 3.0, P = 0.04), with an elevated risk for daily as opposed to less frequent consumption. Salted fish consumption during adolescence was a less significant risk, and current consumption not at all. There were 19 kinds of fishes reported as being eaten as salted fish by the 200 control households. There were marked differences between ethnic groups in preference for different kinds: Chinese preferred red snapper (74% of households), Malay jewfish (54%) and Indian red snapper (28%). Salted fish was hardly ever eaten daily by any household; weekly was a moderate frequency in all ethnic groups; less than weekly most common. There were no statistically significant differences between Chinese NPC case and non-disease control participants in kind of salted fish eaten. Results were the same when the data were analyzed by sex, subethnic group and income.
    Matched MeSH terms: Fishes*
  16. Dougherty G, Ng CE
    Health Phys, 1982 Dec;43(6):915-9.
    PMID: 7152953
    Matched MeSH terms: Fishes*
  17. Chen DF, Meier PG, Hilbert MS
    Bull World Health Organ, 1984;62(2):251-3.
    PMID: 6610493
    Paddy fish (Trichogaster pectoralis Regan) were collected from five sampling locations in a major paddy-growing area of Malaysia and analysed for organochlorine residues. During the same period, ten farming families, chosen at random from each of the five sampling sites, were interviewed. Information was obtained about the quantity of paddy fish consumed, the amount and type of pesticide used on the paddy-field, and the frequency of application.The pesticide residues found in the fish samples were aldrin/dieldrin, chlordane, HCH, and DDT. Only the projected maximum intake level for aldrin/dieldrin approached the acceptable daily intake as recommended by FAO/WHO; other residue levels were relatively low. However, this study considered only fish; the total daily intake of pesticide residues by the Malaysian paddy farmer may be considerably increased by consumption of other contaminated food.
    Matched MeSH terms: Fishes*
  18. Asaduzzaman M, Wahab MA, Rahman MJ, Nahiduzzzaman M, Dickson MW, Igarashi Y, et al.
    Sci Rep, 2019 11 05;9(1):16050.
    PMID: 31690767 DOI: 10.1038/s41598-019-52465-2
    The anadromous Hilsa shad (Tenualosa ilisha) live in the Bay of Bengal and migrate to the estuaries and freshwater rivers for spawning and nursing of the juveniles. This has led to two pertinent questions: (i) do all Hilsa shad that migrate from marine to freshwater rivers come from the same population? and (ii) is there any relationship between adults and juveniles of a particular habitat? To address these questions, NextRAD sequencing was applied to genotype 31,276 single nucleotide polymorphism (SNP) loci for 180 individuals collected from six strategic locations of riverine, estuarine and marine habitats. FST OutFLANK approach identified 14,815 SNP loci as putatively neutral and 79 SNP loci as putatively adaptive. We observed that divergent local adaptations in differing environmental habitats have divided Hilsa shad into three genetically structured ecotypes: turbid freshwater (Western Riverine), clear freshwater (Eastern Riverine) and brackish-saline (Southern Estuarine-Marine). Our results also revealed that genes involved in neuronal activity may have facilitated the juveniles' Hilsa shad in returning to their respective natal rivers for spawning. This study emphasized the application of fundamental population genomics information in strategizing conservation and management of anadromous fish such as Hilsa shad that intersect diverse ecotypes during their life-history stages.
    Matched MeSH terms: Fishes/physiology*
  19. Cioffi MB, Ráb P, Ezaz T, Bertollo LAC, Lavoué S, Oliveira EA, et al.
    Int J Mol Sci, 2019 Sep 02;20(17).
    PMID: 31480792 DOI: 10.3390/ijms20174296
    Arowanas (Osteoglossinae) are charismatic freshwater fishes with six species and two genera (Osteoglossum and Scleropages) distributed in South America, Asia, and Australia. In an attempt to provide a better assessment of the processes shaping their evolution, we employed a set of cytogenetic and genomic approaches, including i) molecular cytogenetic analyses using C- and CMA3/DAPI staining, repetitive DNA mapping, comparative genomic hybridization (CGH), and Zoo-FISH, along with ii) the genotypic analyses of single nucleotide polymorphisms (SNPs) generated by diversity array technology sequencing (DArTseq). We observed diploid chromosome numbers of 2n = 56 and 54 in O. bicirrhosum and O. ferreirai, respectively, and 2n = 50 in S. formosus, while S. jardinii and S. leichardti presented 2n = 48 and 44, respectively. A time-calibrated phylogenetic tree revealed that Osteoglossum and Scleropages divergence occurred approximately 50 million years ago (MYA), at the time of the final separation of Australia and South America (with Antarctica). Asian S. formosus and Australian Scleropages diverged about 35.5 MYA, substantially after the latest terrestrial connection between Australia and Southeast Asia through the Indian plate movement. Our combined data provided a comprehensive perspective of the cytogenomic diversity and evolution of arowana species on a timescale.
    Matched MeSH terms: Fishes/genetics*
  20. Saba AO, Ismail A, Zulkifli SZ, Halim MRA, Wahid NAA, Amal MNA
    Sci Rep, 2020 10 14;10(1):17205.
    PMID: 33057156 DOI: 10.1038/s41598-020-74168-9
    The ornamental fish trade has been considered as one of the most important routes of invasive alien fish introduction into native freshwater ecosystems. Therefore, the species composition and invasion risks of fish species from 60 freshwater fish pet stores in Klang Valley, Malaysia were studied. A checklist of taxa belonging to 18 orders, 53 families, and 251 species of alien fishes was documented. Fish Invasiveness Screening Test (FIST) showed that seven (30.43%), eight (34.78%) and eight (34.78%) species were considered to be high, medium and low invasion risks, respectively. After the calibration of the Fish Invasiveness Screening Kit (FISK) v2 using the Receiver Operating Characteristics, a threshold value of 17 for distinguishing between invasive and non-invasive fishes was identified. As a result, nine species (39.13%) were of high invasion risk. In this study, we found that non-native fishes dominated (85.66%) the freshwater ornamental trade in Klang Valley, while FISK is a more robust tool in assessing the risk of invasion, and for the most part, its outcome was commensurate with FIST. This study, for the first time, revealed the number of high-risk ornamental fish species that give an awareness of possible future invasion if unmonitored in Klang Valley, Malaysia.
    Matched MeSH terms: Fishes*
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