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  1. Huang YJ, Brimblecombe P, Lee CL, Latif MT
    Mar Pollut Bull, 2015 Aug 15;97(1-2):78-84.
    PMID: 26093815 DOI: 10.1016/j.marpolbul.2015.06.031
    Samples of sea-surface microlayer (SML) and sub-surface water (SSW) were collected from two areas-Kaohsiung City (Taiwan) and the southwest coast of Peninsular Malaysia to study the influence of SML on enrichment and distribution and to compare SML with the SSW. Anionic surfactants (MBAS) predominated in this study and were significantly higher in Kaohsiung than in Malaysia. Industrial areas in Kaohsiung were enriched with high loads of anthropogenic sources, accounted for higher surfactant amounts, and pose higher environmental disadvantages than in Malaysia, where pollutants were associated with agricultural activities. The dissolved organic carbon (DOC), MBAS, and cationic surfactant (DBAS) concentrations in the SML correlated to the SSW, reflecting exchanges between the SML and SSW in Kaohsiung. The relationships between surfactants and the physiochemical parameters indicated that DOC and saltwater dilution might affect the distributions of MBAS and DBAS in Kaohsiung. In Malaysia, DOC might be the important factor controlling DBAS.
  2. Mitrousia GK, Huang YJ, Qi A, Sidique SNM, Fitt BDL
    Plant Pathol, 2018 Aug;67(6):1339-1353.
    PMID: 30166691 DOI: 10.1111/ppa.12845
    The Rlm7 gene in Brassica napus is an important source of resistance for control of phoma stem canker on oilseed rape caused by the fungus Leptosphaeria maculans. This study shows the first report of L. maculans isolates virulent against Rlm7 in the UK. Leptosphaeria maculans isolates virulent against Rlm7 represented 3% of the pathogen population when cultivars with the Rlm7 gene represented 5% of the UK oilseed rape area in 2012/13. However, the Rlm7 gene has been widely used since then, representing >15% of the UK oilseed rape area in 2015/16. Winter oilseed rape field experiments included cultivars with the Rlm7 gene, with the Rlm4 gene or without Rlm genes and took place at five sites in the UK over four cropping seasons. An increase in phoma leaf spotting severity on Rlm7 cultivars in successive seasons was observed. Major resistance genes played a role in preventing severe phoma leaf spotting at the beginning of the cropping season and, in addition, quantitative resistance (QR) in the cultivars examined made an important contribution to control of phoma stem canker development at the end of the cropping season. Deployment of the Rlm7 resistance gene against L. maculans in cultivars with QR in combination with sustainable disease management practices will prolong the use of this gene for effective control of phoma stem canker epidemics.
  3. Klionsky DJ, Abdel-Aziz AK, Abdelfatah S, Abdellatif M, Abdoli A, Abel S, et al.
    Autophagy, 2021 Jan;17(1):1-382.
    PMID: 33634751 DOI: 10.1080/15548627.2020.1797280
    In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to provide realistic and reasonable critiques of reports that are focused on these processes. These guidelines are not meant to be a dogmatic set of rules, because the appropriateness of any assay largely depends on the question being asked and the system being used. Moreover, no individual assay is perfect for every situation, calling for the use of multiple techniques to properly monitor autophagy in each experimental setting. Finally, several core components of the autophagy machinery have been implicated in distinct autophagic processes (canonical and noncanonical autophagy), implying that genetic approaches to block autophagy should rely on targeting two or more autophagy-related genes that ideally participate in distinct steps of the pathway. Along similar lines, because multiple proteins involved in autophagy also regulate other cellular pathways including apoptosis, not all of them can be used as a specific marker for bona fide autophagic responses. Here, we critically discuss current methods of assessing autophagy and the information they can, or cannot, provide. Our ultimate goal is to encourage intellectual and technical innovation in the field.
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