Displaying publications 61 - 80 of 163 in total

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  1. Yew SM, Chan CL, Soo-Hoo TS, Na SL, Ong SS, Hassan H, et al.
    Genome Announc, 2013;1(3).
    PMID: 23723391 DOI: 10.1128/genomeA.00158-13
    Pyrenochaeta, classified under the order Pleosporales, is known to cause diseases in plants and humans. Here, we report a draft genome sequence of a Pyrenochaeta sp. isolated from a skin scraping, with an estimated genome size of 39.4 Mb. Genes associated with the synthesis of proteases, toxins, plant cell wall degradation, and multidrug resistance were found.
    Matched MeSH terms: Chromosome Mapping
  2. Chan KG, Sulaiman J, Yong DA, Tee KK, Yin WF, Priya K
    Genome Announc, 2015;3(5).
    PMID: 26404582 DOI: 10.1128/genomeA.01097-15
    Staphylococcus saprophyticus strain SU8 was isolated from a pristine water source in Malaysia and it exhibited degradation of N-hexanoylhomoserine lactone. Here we report the draft genome sequence of S. saprophyticus strain SU8 to further understand its quorum quenching abilities.
    Matched MeSH terms: Chromosome Mapping
  3. Kavousi N, Eng WW, Lee YP, Tan LH, Thuraisingham R, Yule CM, et al.
    Genome Announc, 2016;4(2).
    PMID: 26941132 DOI: 10.1128/genomeA.00023-16
    We report here the first high-quality draft genome sequence of Pasteurella multocida sequence type 128, which was isolated from the infected finger bone of an adult female who was bitten by a domestic dog. The draft genome will be a valuable addition to the scarce genomic resources available for P. multocida.
    Matched MeSH terms: Chromosome Mapping
  4. Chan KG, Yunos NY
    Genome Announc, 2016;4(2).
    PMID: 26941152 DOI: 10.1128/genomeA.00081-16
    Here, we report the draft genome sequence of Chromobacterium piscinae strain ND17. This bacterium was isolated from a fresh water sample in Malaysia and exhibits quorum-sensing activity. This first draft genome of C. piscinae strain ND17 will pave the way to future studies of the quorum-sensing properties of this isolate.
    Matched MeSH terms: Chromosome Mapping
  5. Issa R, Seradja VH, Abdullah MK, Abdul H
    Genome Announc, 2016;4(3).
    PMID: 27340053 DOI: 10.1128/genomeA.00513-16
    This is a report of an annotated genome sequence of Mycobacterium tuberculosis MTBR1/09. The organism was isolated from a sputum sample from a male patient in Malaysia.
    Matched MeSH terms: Chromosome Mapping
  6. Issa R, Seradja VH, Abdullah MK, Abdul H
    Genome Announc, 2016;4(3).
    PMID: 27340055 DOI: 10.1128/genomeA.00517-16
    This is a report of the annotated genome sequence of Mycobacterium tuberculosis MTBR3/09. The organism was isolated from a sputum sample in Malaysia.
    Matched MeSH terms: Chromosome Mapping
  7. Chan KG, Yin WF, Tee KK, Chang CY, Priya K
    Genome Announc, 2015;3(3).
    PMID: 26021935 DOI: 10.1128/genomeA.00565-15
    We report the draft genome sequence of Pandoraea sp. strain E26 isolated from a former landfill site, sequenced by the Illumina MiSeq platform. This genome sequence will be useful to further understand the quorum-sensing system of this isolate.
    Matched MeSH terms: Chromosome Mapping
  8. Poli A, Nicolaus B, Chan KG, Kahar UM, Chan CS, Goh KM
    Genome Announc, 2015;3(3).
    PMID: 25999577 DOI: 10.1128/genomeA.00490-15
    Anoxybacillus thermarum AF/04(T) was isolated from the Euganean hot springs in Abano Terme, Italy. The present work reports a high-quality draft genome sequence of strain AF/04(T). This work also provides useful insights into glycoside hydrolases, glycoside transferases, and sugar transporters that may be involved in cellular carbohydrate metabolism.
    Matched MeSH terms: Chromosome Mapping
  9. Chan KG, Chen JW, Chang CY, Yin WF, Chan XY
    Genome Announc, 2015;3(2).
    PMID: 25814592 DOI: 10.1128/genomeA.00095-15
    In this work, we describe the genome of Lysinibacillus sp. strain A1, which was isolated from tropical soil. Analysis of its genome sequence shows the presence of a gene encoding for a putative peptidase responsible for nitrogen compounds.
    Matched MeSH terms: Chromosome Mapping
  10. Chan KG, Kher HL, Chang CY, Yin WF, Tan KH
    Genome Announc, 2015;3(2).
    PMID: 25792063 DOI: 10.1128/genomeA.00145-15
    Dickeya chrysanthemi is well known as a plant pathogen that caused major blackleg in the European potato industry in the 1990s. D. chrysanthemi strain L11 was discovered in a recreational lake in Malaysia. Here, we present its draft genome sequence.
    Matched MeSH terms: Chromosome Mapping
  11. Akita H, Kimura Z, Yusoff MZ, Nakashima N, Hoshino T
    Genome Announc, 2016;4(4).
    PMID: 27389268 DOI: 10.1128/genomeA.00630-16
    Burkholderia sp. strain CCA53 was isolated from leaf soil collected in Higashi-Hiroshima City in Hiroshima Prefecture, Japan. Here, we present a draft genome sequence of this strain, which consists of a total of 4 contigs containing 6,647,893 bp, with a G+C content of 67.0% and comprising 9,329 predicted coding sequences.
    Matched MeSH terms: Chromosome Mapping
  12. Issa R, Seradja VH, Abdullah MK
    Genome Announc, 2016;4(3).
    PMID: 27365342 DOI: 10.1128/genomeA.00376-16
    Here, we report of the annotated genome sequence of Mycobacterium tuberculosis MTB221/11. The organism was isolated from the cerebrospinal fluid of a patient in Malaysia.
    Matched MeSH terms: Chromosome Mapping
  13. Mohd Tap R, Kamarudin NA, Ginsapu SJ, Ahmed Bakri AR, Ahmad N, Amran F, et al.
    Genome Announc, 2018 Apr 05;6(14).
    PMID: 29622608 DOI: 10.1128/genomeA.00166-18
    Candida pseudohaemulonii is phylogenetically close to the C. haemulonii complex and exhibits resistance to amphotericin B and azole agents. We report here the draft genome sequence of C. pseudohaemulonii UZ153_17 isolated from the blood culture of a neutropenic patient. The draft genome is 3,532,003,666 bp in length, with 579,838 reads, 130 contigs, and a G+C content of 47.15%.
    Matched MeSH terms: Chromosome Mapping
  14. Badrun R, Abu Bakar N, Laboh R, Redzuan R, Bala Jaganath I
    Genome Announc, 2017 Jun 01;5(22).
    PMID: 28572313 DOI: 10.1128/genomeA.00408-17
    Blood disease bacterium A2 HR-MARDI was isolated from banana plants infected with banana blood disease and which were planted in Kuala Kangsar, Malaysia. Here, we report a draft genome sequence of blood disease bacterium A2 HR-MARDI, which could provide important information on the virulence mechanism of this pathogen.
    Matched MeSH terms: Chromosome Mapping
  15. Too CC, Ong KS, Ankenbrand MJ, Lee SM, Yule CM, Keller A
    Genome Announc, 2018 Jun 21;6(25).
    PMID: 29930066 DOI: 10.1128/genomeA.00561-18
    We report the draft genome sequence of a bacterial isolate, Paraburkholderia sp. strain C35, which was isolated from a Malaysian tropical peat swamp forest. The putative genes for the biogeochemical processes were annotated and are publicly available in the online databases.
    Matched MeSH terms: Chromosome Mapping
  16. Too CC, Ong KS, Lee SM, Yule CM, Keller A
    Genome Announc, 2018 Jun 21;6(25).
    PMID: 29930031 DOI: 10.1128/genomeA.00459-18
    We report here the draft genome sequences of a bacterial isolate, Dyella sp. strain C11, which was isolated from a Malaysian tropical peat swamp forest. The putative genes for the biogeochemical processes were annotated, and the genome was deposited in an online database.
    Matched MeSH terms: Chromosome Mapping
  17. Nadarajah K, Mat Razali N, Cheah BH, Sahruna NS, Ismail I, Tathode M, et al.
    Genome Announc, 2017 Oct 26;5(43).
    PMID: 29074665 DOI: 10.1128/genomeA.01188-17
    Sheath blight, caused by Rhizoctonia solani anastomosis group 1 subgroup 1A (AG1-1A), is one of the most devastating rice diseases worldwide. Here, we report the draft genome sequence of R. solani AG1-1A strain 1802/KB isolated from a popular Malaysian rice variety. To the best of our knowledge, this is the second reported representative genome from AG1-1A.
    Matched MeSH terms: Chromosome Mapping
  18. Azwani F, Suzuki K, Honjyo M, Tashiro Y, Futamata H
    Genome Announc, 2017 Sep 07;5(36).
    PMID: 28883136 DOI: 10.1128/genomeA.00875-17
    Comamonas testosteroni strain R2 was isolated from a continuous culture enriched by a low concentration of phenol-oxygenating activities with low Ks values (below 1 μM). The draft genome sequence of C. testosteroni strain R2 reported here may contribute to determining the phenol degradation gene cluster.
    Matched MeSH terms: Chromosome Mapping
  19. Najah S, Chong TM, Gerbaud C, Chan KG, Mellouli L, Pernodet JL
    Genome Announc, 2017 Aug 24;5(34).
    PMID: 28839022 DOI: 10.1128/genomeA.00828-17
    Streptomyces sp. TN58, isolated from a Tunisian soil sample, produces several natural products, including acyl alpha-l-rhamnopyranosides. It possesses a 7.6-Mb linear chromosome. This is, to our knowledge, the first genome sequence of a microorganism known to produce acyl alpha-l-rhamnopyranosides, and it will be helpful to study the biosynthesis of these specialized metabolites.
    Matched MeSH terms: Chromosome Mapping
  20. Ahmad N, Hii SY, Mohd Khalid MK, Abd Wahab MA, Hashim R, Tang SN, et al.
    Genome Announc, 2017 Mar 02;5(9).
    PMID: 28254972 DOI: 10.1128/genomeA.01670-16
    Corynebacterium diphtheriae has caused multiple isolated diphtheria cases in Malaysia over the years. Here, we report the first draft genome sequences of 15 Malaysia C. diphtheriae clinical isolates collected from the years 1981 to 2016.
    Matched MeSH terms: Chromosome Mapping
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