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The complete plastid genome of Citrus hystrix DC. 1813 (Rutaceae) and its phylogenetic analysis

Lee WS 1 , Donrung W 2 , Hung BM 3 , Muhamad Rusly NH 1 , Lee SY 4 , Tanee T 2

Affiliations 

  • 1 Department of Education and Liberal Arts, INTI International University, Nilai, Negeri Sembilan, Malaysia
  • 2 Department of Environment and Resource Studies, Mahasarakham University, Maha Sarakham, Thailand
  • 3 Department of Forest Inventory and Planning, Vietnam National University of Forestry, Hanoi, Vietnam
  • 4 Department of Health and Life Sciences, INTI International University, Nilai, Negeri Sembilan, Malaysia
Mitochondrial DNA B Resour, 2025;10(1):94-98.
PMID: 39802348 DOI: 10.1080/23802359.2025.2449723

Abstract

The complete plastome size of Citrus hystrix DC. 1813 was 159,893 bp in length and has a typical quadripartite structure. The 87,148-bp-long large single-copy and the 18,763-bp-long small single-copy regions were separated by a pair of inverted repeats (each 26,991 bp). The plastome was predicted to contain 132 genes, of which 87 were CDS, 37 were tRNA, and eight were rRNA genes. The plastome was A/T biassed, and the overall GC content was 38.4%. Using maximum likelihood and Bayesian inference methods, the phylogenetic analysis of the complete plastome sequence revealed a close relationship between C. hystrix and C. aurantiifolia, placing them under the same clade as C. micrantha.

* Title and MeSH Headings from MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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