Displaying publications 41 - 60 of 339 in total

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  1. Baharudin NS, Tah MMTM, Zulkifli SZ, Ab Ghani NI, Noor HM, Sabar Sabal NH
    Trop Life Sci Res, 2023 Mar;34(1):151-183.
    PMID: 37065795 DOI: 10.21315/tlsr2023.34.1.10
    Deforestation in Cameron Highlands, Malaysia has increased significantly in the past few years to accommodate the growing population of Cameron Highlands. This led to a rapid urbanisation in Cameron Highlands which increased anthropogenic activities, causing degradation of the natural environment. Such environmental changes highlight the necessity of wildlife and resource inventories of available forested areas to improve existing conservation and management plans, especially for threatened taxa such as the non-volant small mammals. However, very few studies are known to focus on the effect of deforestation on non-volant small mammals, especially in the adjacent forest. This survey aimed to document non-volant small mammals from four habitat types (restoration areas, boundary, disturbed and undisturbed areas) of Terla A and Bertam, and undisturbed forest of Bukit Bujang Forest Reserve, Cameron Highlands, Malaysia. Samplings were conducted in two phases between August 2020 to January 2021. A total of 80 live traps were deployed along the transect lines in all three study sites, and 10 camera traps were set randomly in each forested area. Results demonstrated that species diversity (H') is higher at Terla A Forest Reserve compared to Bertam and Bukit Bujang Forest Reserve. In contrast, species diversity in the boundary area (S = 8, H' = 2.025) and disturbed forest area (S = 8, H' = 1.992) had similar number of species (S) compared to others study habitat; restoration area had the lowest species diversity (S = 3, H' = 0.950). Berylmys bowersi was the most captured species from trappings and Lariscus insignis was the most frequently recorded species from camera trappings for all study sites. The results of the survey provided new information on non-volant small mammals in Cameron Highlands for future research, conservation, and management.
  2. Bakaruddin NH, Ab Majid AH
    Trop Life Sci Res, 2019 Jan;30(1):33-56.
    PMID: 30847032 MyJurnal DOI: 10.21315/tlsr2019.30.1.3
    This study examined the tunneling activity and the behaviour of two subterranean termites, Globitermes sulphurues and Coptotermes gestroi treated with four plant extracts, namely Pyllanthus niruri, Azadirachta indica, Leucaena leucocephala and Andrographis paniculata. All plants were extracted with three different solvents (methanol, hexane and water) and were diluted into three concentrations (500, 5,000 and 10,000 ppm). A group of 50 workers and 2 soldiers were tested and observed daily during the exposure in order to determine their survivorship and behaviour. Both sections were scored to determine their tunneling activities after seven days. There was a significant difference of tunneling activities of C. gestroi on sand treated with plant extracts (X2(2) = 31.790, p < 0.0001) with a mean rank of 8.50 for methanolic extracts and 32.50 for both hexane and water extracts. Meanwhile, no significant difference was observed on tunneling activity of G. sulphureus on treated sand (X2(2) = 2.200, p = 0.333) with a mean rank of 20.72 for methanolic extracts, 26.31 for water extracts and 26.47 for hexane extracts. Results showed that plants extracted with methanol demonstrated strong repellent properties with 0 tunneling activity on the treated sand and low survivorship of both termites. Moreover, both termites did not survive (0%) when they were treated with methanolic extracts at 10,000 ppm. They also displayed a different behaviour post-exposure such as avoidance, gradually losing the ability to walk and low feeding consumption. These results indicate that there is a strong termiticidal activity of plants extracted with methanol against C. gestroi and G. sulphureus.
  3. Bala JD, Lalung J, Al-Gheethi AAS, Hossain K, Ismail N
    Trop Life Sci Res, 2018 Jul;29(2):131-163.
    PMID: 30112146 MyJurnal DOI: 10.21315/tlsr2018.29.2.10
    This study was aimed at identifying indigenous microorganisms from palm oil mill effluent (POME) and to ascertain the microbial load. Isolation and identification of indigenous microorganisms was subjected to standard microbiological methods and sequencing of the 16S rRNA and 18S rRNA genes. Sequencing of the 16S rRNA and 18S rRNA genes for the microbial strains signifies that they were known as Micrococcus luteus 101PB, Stenotrophomonas maltophilia 102PB, Bacillus cereus 103PB, Providencia vermicola 104PB, Klebsiella pneumoniae 105PB, Bacillus subtilis 106PB, Aspergillus fumigatus 107PF, Aspergillus nomius 108PF, Aspergillus niger 109PF and Meyerozyma guilliermondii 110PF. Results revealed that the population of total heterotrophic bacteria (THB) ranged from 9.5 × 105 - 7.9 × 106 cfu/mL. The total heterotrophic fungi (THF) ranged from 2.1 × 104 - 6.4 × 104 cfu/mL. Total viable heterotrophic indigenous microbial population on CMC agar ranged from 8.2 × 105 - 9.1 × 106 cfu/mL and 1.4 × 103 - 3.4 × 103 cfu/mL for bacteria and fungi respectively. The microbial population of oil degrading bacteria (ODB) ranged from 6.4 × 105 - 4.8 × 106 cfu/mL and the oil degrading fungi (ODF) ranged from 2.8 × 103 - 4.7 × 104 cfu/mL. The findings revealed that microorganisms flourish well in POME. Therefore, this denotes that isolating native microorganisms from POME is imperative for effectual bioremediation, biotreatment and biodegradation of industrial wastewaters.
  4. Basari N, Mustafa NS, Yusrihan NEN, Yean CW, Ibrahim Z
    Trop Life Sci Res, 2019 Jan;30(1):23-31.
    PMID: 30847031 MyJurnal DOI: 10.21315/tlsr2019.30.1.2
    Ficus plants are commonly planted as ornamentals along roadsides in Malaysia. In 2010, Ficus plants in Kuala Terengganu were found to be attacked by a moth, identified as Trilocha varians. The larvae of this moth fed on Ficus leaves causing up to 100% defoliation. This study was conducted to determine the life cycle of T. varians under two different environmental temperatures and to control this pest using two different insecticides. Our findings showed that there were significant differences in the time taken for eggs to hatch and larval and pupation period between low and high environmental temperatures. Results also showed that fipronil had lower LT50 and LT95 than malathion. This study provides new information on the life history of T. varians under two different conditions and the efficiency in controlling T. varians larvae using insecticides. The results of this study are important for future management in controlling T. varians population especially in Kuala Terengganu, Malaysia.
  5. Begum S, Firdous S, Naeem Z, Chaudhry GE, Arshad S, Abid F, et al.
    Trop Life Sci Res, 2023 Sep;34(3):129-149.
    PMID: 37860095 DOI: 10.21315/tlsr2023.34.3.7
    In present study, Water Quality Index (WQI) has been assessed of the Rawal Lake which is a major source of drinking water for people in the Federal Capital, Islamabad, and its adjacent city Rawalpindi in Pakistan. For this, the principal component analysis (PCA) and WQI were applied as an integrated approach to quantitatively explore difference based on spatial variation in 11 water quality parameters of the five major feeding tributaries of the Rawal Lake, Pakistan. The results of temperature in water, total dissolved solids, pH, electrical conductivity, chlorides and sulfates were well within the allowable World Health Organisation's (WHO) limits. However, the heavy metals like cadmium and lead were above permissible limits by the WHO in tributaries of Bari Imam and Rumli. Moreover, this has been proven by the Pearson correlation which suggested strong positive correlation (0.910*) between lead and cadmium. The results of present study were subjected to statistical analysis, i.e., PCA which gave three major factors contributing 96.5% of the total variance. For factor 1, pH, TDS, alkalinity, chlorides, sulfates and zinc have highest factor loading values (>0.60) and presented that these parameters were among the most significant parameters of first factor. As per the WQI results, the water was categorised in two major classes indicating that water of Bari Imam and Rumli is highly contaminated with heavy metals and totally unsuitable for drinking purposes. Based on the results of the present study, it is suggested to make heavy metals consideration as an integrated component in future planning for maintaining water quality of the Rawal Lake and its tributaries.
  6. Beoy LA, Woei WJ, Hay YK
    Trop Life Sci Res, 2010 Dec;21(2):91-9.
    PMID: 24575202 MyJurnal
    Studies have shown an association between oxidative stress and alopecia. Patients with alopecia generally exhibit lower levels of antioxidants in their scalp area as well as a higher lipid peroxidation index. Tocotrienols belong to the vitamin E family and are known to be potent antioxidants. Hence, a study was conducted to investigate the effect of tocotrienol supplementation on hair growth in volunteers suffering from hair loss. Twenty one volunteers were randomly assigned to orally receive 100 mg of mixed tocotrienols daily while 17 volunteers were assigned to receive placebo capsule orally. The volunteers were monitored for the number of hairs in a pre-determined scalp area as well as the weight of 20 strands of 1 cm length hair clippings at 0 (before supplementation), 4 and 8 months. The number of hairs of the volunteers in the tocotrienol supplementation group increased significantly as compared to the placebo group, with the former recording a 34.5% increase at the end of the 8-month supplementation as compared to a 0.1% decrease for the latter. Nevertheless, the cumulative weight of 20 strands of hair clippings did not differ much from the baseline for both supplementation groups at the end of the study period. In conclusion, this trial demonstrated that supplementation with tocotrienol capsules increases hair number in volunteers suffering from hair loss as compared to the placebo group. This observed effect was most likely to be due to the antioxidant activity of tocotrienols that helped to reduce lipid peroxidation and oxidative stress in the scalp, which are reported to be associated with alopecia.
  7. Bimo Setiarto RH, Isra M, Andrianto D, Widhyastuti N, Masrukhin
    Trop Life Sci Res, 2023 Jun;34(2):255-278.
    PMID: 38144387 DOI: 10.21315/tlsr2023.34.2.13
    Probiotics are a non-digestible food ingredient that promotes the growth of beneficial microorganisms in the intestines. One of the functional food ingredients, Momala corn flour, is a source of prebiotics with a resistant starch content of 4.42%. Thi s study aimed to improve the prebiotic properties and resistant starch content of modified corn flour (MCF) Momala Gorontalo by using physical, chemical, and enzymatic modification processes. The research methods include physical modification (heat moisture treatment, annealing, autoclaving-cooling cycling, microwave), chemical modification (acid hydrolysis), and enzymatic modification (debranching pullulanase). The results showed that the modified by heat moisture treatment (HMT) increased RS levels 1-fold, annealing modification (ANN) 8.9-fold, autoclaving-cooling one cycle modification (AC-1C) 2.9-fold, autoclaving-cooling two cycles modification (AC-2C) 2.0-fold, microwave modification (MW) 1.3-fold, acid hydrolysis (HA) modification 5.0-fold, and debranching pullulanase (DP) modification 3.8-fold compared with corn flour control without modification. The value of the prebiotic activity of MCF hydrolysed acid (HA) is 0.03, and debranching pullulanase (DP) is 0.02 against Enteropathogenic Escherichia coli (EPEC). The prebiotic effect value of MCF HA and DP were 0.76 and 0.60, respectively. The prebiotic index value of MCF HA and DP were 0.60 and 0.48, respectively. This study confirms that MCF HA and DP are good prebiotic candidates because they have resistant starch content, low starch digestibility, and resistance to simulated gastric fluid hydrolysis than unmodified corn flour.
  8. Brandon Yeo Pei Hui, Siaw San Hwang, Mrinal Bhave
    Trop Life Sci Res, 2019;30(2):1-20.
    MyJurnal
    Doxorubicin (DOX) adalah salah satu ubat kemoterapi yang paling berkesan untuk merawat pelbagai neoplasma seperti leukemia, limfoma dan kanser payudara. Walau bagaimanapun, ia sering dikaitkan dengan kardiomiopati. Pada masa ini, tiada rawatan yang sesuai untuk mengurangkan kesan kardiomiopati tanpa kesan sampingan yang ketara. Oleh itu, kajian ini bertujuan untuk mengkaji kesan-kesan perlindungan potensi ekstrak benih padi (RSE) terhadap kesitotoksikan yang disebabkan oleh DOX menggunakan kajian kultur sel vitro. Keupayaan antioksidan RSE dinilai, dan hasilnya menunjukkan jumlah kandungan fenolik yang lebih rendah (TPC), tetapi jumlah kandungan flavonoid total (TFC) dan kapasiti antioksidan yang setara trolox (TEAC), dibandingkan dengan ekstrak benih wheatgrass. Satu siri eksperimen spektroskopi penyerapan dan pendarfluor menunjukkan bahawa RSE boleh menghalang pembentukan kompleks DOX-DNA pada kepekatan yang diuji. Tambahan pula, daya maju sel kardiomiosit sel, H9c2 (2-1), telah diuji selepas 24, 48 dan 72 jam rawatan DOX terhadap RSE menggunakan ujian proliferasi sel berdasarkan garam tetrazolium (MTS reagent). Hasilnya menunjukkan kesan perlindungan yang signifikan terhadap RSE terhadap kesitotoksikan yang disebabkan oleh DOX. Jalur sel karsinoma nasofarinks, HK1, digunakan sebagai kawalan untuk menentukan sama ada keberkesanan DOX terjejas oleh pentadbiran bersama RSE. Hasilnya tidak menunjukkan kesan negatif terhadap keberkesanan dadah. Pelbagai sifat berfaedah RSE menunjukkan potensi kuatnya untuk membangunkan agen kardioprotektif untuk melengkapi rawatan DOX dalam tetapan klinikal.
  9. Bui Thi Tuong Thu, Tran Van Minh, Boey, Peng Lim, Chan, Lai Keng
    Trop Life Sci Res, 2011;22(2):37-43.
    MyJurnal
    Seeds of two selected clones of Artemisia annua L., TC1 and TC2, were germinated in a greenhouse. Four-week-old seedlings from both clones were grown in the Thù Ðúc province of Ho Chi Minh City on 2nd January 2009 and Ðà Lat on 20 th January 2009. During this study period in Thù Ðúc province, which is situated 4–5 m above sea level, was experiencing a tropical, dry season with temperatures ranging from 26.2°C–32.8°C. Ðà Lat, situated at 1500–2000 m above sea level, was having temperate, dry season with lower temperatures, ranging from 10.5°C–18.0°C. The high temperatures and low elevation in Thù Ðúc Province led to slow vegetative growth for all of the plants from the two different clones and the artemisinin contents were significantly reduced. The temperate environment of Ðà Lat supported robustly growing plants, with plant heights and branch lengths 4–5 times taller and longer that those planted at Thù Ðúc Province. The artemisinin contents of A. annua planted at Ðà Lat were 3–4 times greater than those cultivated at Thù Ðúc Province. Hence, this study indicated that the variations observed in plant growth and artemisinin contents were due to temperature effects because the two selected clones were genetically homogenous. The cold weather of Ðà Lat was suitable for planting of A. annua as opposed to the tropical weather of Thù Ðúc Province.
  10. Cely-Gómez MA, Castillo-Figueroa D, Pérez-Torres J
    Trop Life Sci Res, 2021 Mar;32(1):47-61.
    PMID: 33936550 DOI: 10.21315/tlsr2021.32.1.3
    The surge of oil palm production in the Neotropics has become a major concern about the potential impacts on biodiversity. In the Colombian Orinoquia, which has shown a massive landscape transformation due to the growth of oil palm plantations, the effects of oil palm agriculture on bats in this region have not been studied up to date. To understand the impact of habitat conversion on bat diversity, we characterised bat assemblages in secondary forest and palm plantations in the Colombian Llanos foothills (Meta, Colombia). We captured 393 individuals (forest = 81, plantation = 312) of 18 species and 3 families. The forest cover presented three exclusive species while the plantation had five. Species diversity (q1) and evenness (J') were higher in the forest compared to the plantation. These differences derived from the increase in abundances of generalist species (Artibeus sp., Carollia spp.) in the plantation. Despite the habitat simplification caused by oil palm plantations, this monoculture provides a cover that is used by some bats, decreasing their risk of predation and allowing movement between patches of forest habitat as steppingstones. Maintaining forest cover in agricultural landscapes favours diversity by generating a "spillover effect" of the forest towards plantations, which in the case of some bats contributes to the reduction of species isolation and the maintenance of ecosystem services provided by them. It is important to improve management practices of oil palm plantations to minimise negative impacts on biodiversity, considering the expansion of this productive system and the scarcity of protected areas in this region.
  11. Chacón LJ, Yepes GD, Cardozo J, Rueda F, Castillo V, Torres A, et al.
    Trop Life Sci Res, 2023 Sep;34(3):259-277.
    PMID: 37860088 DOI: 10.21315/tlsr2023.34.3.14
    The sperm interacts with seminal plasma proteins during its transport through the female reproductive tract to reach the oocyte. Seminal plasma proteins have been associated as biomarkers of fertility in bovine males, while two-dimensional electrophoresis in polyacrylamide gels under denaturing conditions (2D-PAGE) is a useful technique for their separation, allowing their subsequent analysis with the aid of specialised software. Brahman bulls are known for their tolerance to tropical conditions such as low-quality pastures, high temperatures, and relative humidity as well as moderate resistance to infestations by parasites and insects. The present study describes the two-dimensional electrophoretic profiles of the seminal plasma proteins in the rainy and dry seasons, associating them with the fertility of Brahman bulls in the Colombian Orinoquía in a 90-days breeding season and a single-sire mating system (1 bull per 50 Brahman cows) with 60 consecutive days of rest. The fertility-related seminal plasma protein spots increased in the dry season. Likewise, a meaningful relationship was found between the protein spots that possibly coincide with the Binder of Sperm Proteins. It was also found that bulls with the highest percentages of pregnancy also had similarities in their 2D seminal plasma maps. We conclude that the seminal plasma protein profile of Brahman bulls raised in the Colombian low tropic changes between rainy and dry seasons, and such changes may influence the reproductive performance of those animals.
  12. Chan KO, Grismer LL, Wood, PL, Grismer JL, Ahmad N
    Trop Life Sci Res, 2009;20(1):-.
    MyJurnal
    A herpetological survey was conducted at Pulau Besar, Melaka from 10 to 12 June 2008, resulting in the discovery of five species of amphibians, nine species of lizards (including one new species of the gekkonid Cyrtodactylus) and one snake species. This report constitutes the first checklist of the herpetofauna of Pulau Besar and the Water Islands Archipelago.
  13. Chan, Kin Onn, Mohd. Shahfiz Azman, Nor Azlin, Pan, Khang Aun
    Trop Life Sci Res, 2009;20(1):-.
    MyJurnal
    A survey was carried out at the Pasoh Forest Reserve from 13–19 December, 2007 and 20–24 January, 2008, to inventory the herpetofauna contained therein. A total of 23 species of reptiles and amphibians were collected during this survey, five of which have not previously been recorded in the Pasoh Forest Reserve. An updated checklist which incorporates findings from previous studies is presented.
  14. Chang, Geraldine Olive Ju Lien, Lai, Ven Inn, Tan, Aileen Shau Hwai, Zulfigar Yasin
    Trop Life Sci Res, 2016;27(11):45-51.
    MyJurnal
    A small scale laboratory study was conducted to determine the effects of
    salinity ranging from 15, 20, 25, 30, 35, 40, and 45 ppt on the filtration rates of juvenile
    oyster Crassostrea iredalei with 25 ppt as the control. Three juvenile oysters (shell weight:
    1.04 ± 0.12 g; shell length: 1.9 ± 0.2 cm; shell height: 1.9 ± 0.1 cm) were used to test the
    filtration rates in each salinity over the course of 8 hours. The hourly filtration rates were
    determined from the exponential decrease in algal (Chaetoceros calcitrans) concentration
    as a function of time. The oyster in 35 ppt salinity produced the highest overall filtration
    rate (FR2) with 134.06 ± 15.66 mL–1 hr–1 oyster–1 and the lowest overall filtration rate (FR2)
    occurred in oyster exposed to 15 ppt and 45 ppt with 31.30 ± 6.90 mL–1 hr–1 oyster–1 and
    32.11 ± 7.68 mL–1 hr–1 oyster–1
    respectively throughout the 8 hours. The result from this
    study can be useful for optimum oyster culturing and the oysters can be employed as a
    natural biofilter in marine polyculture farming.
  15. Chaturvedi D, Singh VK
    Trop Life Sci Res, 2016 Aug;27(2):25-36.
    PMID: 27688849 DOI: 10.21315/tlsr2016.27.2.3
    Fasciolosis is a water and food-borne disease caused by the liver fluke Fasciola hepatica and Fasciola gigantica. This disease is widespread in different parts of the world. Lymnaeidae and Planorbidae snails are the intermediate hosts of these flukes. Snail population management is a good tool to control fasciolosis because gastropods represent the weakest link in the life-cycle of trematodes. Chlorophyll can be extracted from any green plant. Chlorophyllin was prepared from spinach in 100% ethanol by using different types of chemicals. The chlorophyll obtained from spinach was transformed into water-soluble chlorophyllin. In the present paper, toxicity of chlorophyllin against the snail Lymnaea acuminata was time and concentration dependent. The toxicity of extracted and pure chlorophyllin at continuous 4 h exposure of sunlight was highest with lethal concentration (LC50) of 331.01 mg/L and 2.60 mg/L, respectively, than discontinuous exposure of sunlight up to 8 h with LC50 of 357.04 mg/L and 4.94 mg/L, respectively. Toxicity of extracted chlorophyllin was noted in the presence of different monochromatic visible lights. The highest toxicity was noted in yellow light (96 h, LC50 392.77 mg/L) and the lowest in green light (96 h, LC50 833.02 mg/L). Chlorophyllin in combination with solar radiation or different wavelength of monochromatic visible lights may become a latent remedy against the snail L. acuminata. It was demonstrated that chlorophyllin was more toxic in sunlight. Chlorophyllin is ecologically safe and more economical than synthetic molluscicides which have the potential to control the incidence of fasciolosis in developing countries.
  16. Chee, Su Yin, Sim, Yee Kwang
    Trop Life Sci Res, 2016;27(11):39-44.
    MyJurnal
    Land reclamation in Penang began two decades ago and is still rampant with
    large reclamation projects planned to be executed in the near future. The present study
    provides the first information on effects of land reclamation in Penang towards the coastal
    macroinvertebrates. This study assessed the abundance, diversity, and evenness of
    coastal invertebrates assumed to be the foremost affected when land is reclaimed. Three
    kinds of areas were focused on: reclaimed, unclaimed (adjacent to reclaimed), and
    undisturbed. A total of 53 species of macroinvertebrates from 10 classes (Gastropoda,
    Bivalvia, Polychaeta, Malacostraca, Maxillopoda, Echinoidea, Polyplacophora,
    Branchiopoda, Scaphopoda, and Holothuroidea) were sampled. Reclaimed areas were
    moderately rich in species averaging 11 species compared to 7 species in adjacent and
    14 in undisturbed areas. Species richness was the highest in Teluk Aling (an undisturbed
    area) with 22 species, and was the lowest in Gurney Drive (an adjacent area) with 2
    species. The average species diversity and evenness on reclaimed land was the lowest
    with values of 1.9974 and 0.5787, respectively. The diversity was higher by 5.07% in
    adjacent areas and by 22.92% in undisturbed areas compared to reclaimed areas.
    Species evenness was 29.75% higher in unreclaimed areas and 17.87% higher in
    undisturbed areas compared to reclaimed areas. Land reclamation reduces species
    diversity and evenness, and to a lesser extent, species richness.
  17. Chu KB, Abdulah A, Abdullah SZ, Bakar RA
    Trop Life Sci Res, 2013 Dec;24(2):77-84.
    PMID: 24575250 MyJurnal
    The mass mortality of cobia (Rachycentron canadum) within 2-3 days was reported by 3 private farms in Bukit Tambun, Pulau Pinang, in February and March 2007. Only cobia with body weights of 3-4 kg were affected. Most diseased cobia swam on the surface and displayed flashing behaviour. All samples were positive for viral nervous necrosis (VNN) with low to medium levels of infection. Infestations by leeches (Zeylanicobdella arugamensis), body monogeneans (Benedenia sp.) and copepods (Caligus sp.) were also found, but no pathogenic bacteria were isolated. All water quality parameters monitored were within optimal ranges for culturing cobia. The main causes of high mortality in cobia remain unclear during the study. However, we believe that the mass mortality of cobia could be probably due to VNN infection and that the rate of mortality will increase further when cobia are subjected to aquaculture-related stresses (e.g., limited space). Traditional cages with a size of 2 (length) × 2 (width) × 1 m (depth) should only be used for rearing cobia below 1 kg in weight given the species' natural behaviours. In addition, cobia fingerlings should be screened for VNN prior to stocking them in cages.
  18. Chung HH, Lim LWK, Liao Y, Lam TT, Chong YL
    Trop Life Sci Res, 2020 Apr;31(1):107-121.
    PMID: 32963714 DOI: 10.21315/tlsr2020.31.1.7
    The Trigonopoma pauciperforatum or the redstripe rasbora is a cyprinid commonly found in marshes and swampy areas with slight acidic tannin-stained water in the tropics. In this study, the complete mitogenome sequence of T. pauciperforatum was first amplified in two parts using two pairs of overlapping primers and then sequenced. The size of the mitogenome is 16,707 bp, encompassing 22 transfer RNA genes, 13 protein-coding genes, two ribosomal RNA genes and a putative control region. Identical gene organisation was detected between this species and other family members. The heavy strand accommodates 28 genes while the light strand houses the remaining nine genes. Most protein-coding genes utilise ATG as start codon except for COI gene which uses GTG instead. The terminal associated sequence (TAS), central conserved sequence block (CSB-F, CSB-D and CSB-E) as well as variable sequence block (CSB-1, CSB-2 and CSB-3) are conserved in the control region. The maximum likelihood phylogenetic tree revealed the divergence of T. pauciperforatum from the basal region of the major clade, where its evolutionary relationships with Boraras maculatus, Rasbora cephalotaenia and R. daniconius are poorly resolved as suggested by the low bootstrap values. This work contributes towards the genetic resource enrichment for peat swamp conservation and comprehensive in-depth comparisons across other phylogenetic researches done on the Rasbora-related genus.
  19. Dahari DE, Salleh RM, Mahmud F, Chin LP, Embi N, Sidek HM
    Trop Life Sci Res, 2016 Aug;27(2):53-71.
    PMID: 27688851 MyJurnal DOI: 10.21315/tlsr2016.27.2.5
    Exploiting natural resources for bioactive compounds is an attractive drug discovery strategy in search for new anti-malarial drugs with novel modes of action. Initial screening efforts in our laboratory revealed two preparations of soil-derived actinomycetes (H11809 and FH025) with potent anti-malarial activities. Both crude extracts showed glycogen synthase kinase 3β (GSK3β)-inhibitory activities in a yeast-based kinase assay. We have previously shown that the GSK3 inhibitor, lithium chloride (LiCl), was able to suppress parasitaemia development in a rodent model of malarial infection. The present study aims to evaluate whether anti-malarial activities of H11809 and FH025 involve the inhibition of GSK3β. The acetone crude extracts of H11809 and FH025 each exerted strong inhibition on the growth of Plasmodium falciparum 3D7 in vitro with 50% inhibitory concentration (IC50) values of 0.57 ± 0.09 and 1.28 ± 0.11 µg/mL, respectively. The tested extracts exhibited Selectivity Index (SI) values exceeding 10 for the 3D7 strain. Both H11809 and FH025 showed dosage-dependent chemo-suppressive activities in vivo and improved animal survivability compared to non-treated infected mice. Western analysis revealed increased phosphorylation of serine (Ser 9) GSK3β (by 6.79 to 6.83-fold) in liver samples from infected mice treated with H11809 or FH025 compared to samples from non-infected or non-treated infected mice. A compound already identified in H11809 (data not shown), dibutyl phthalate (DBP) showed active anti-plasmodial activity against 3D7 (IC50 4.87 ± 1.26 µg/mL which is equivalent to 17.50 µM) and good chemo-suppressive activity in vivo (60.80% chemo-suppression at 300 mg/kg body weight [bw] dosage). DBP administration also resulted in increased phosphorylation of Ser 9 GSK3β compared to controls. Findings from the present study demonstrate that the potent anti-malarial activities of H11809 and FH025 were mediated via inhibition of host GSK3β. In addition, our study suggests that DBP is in part the bioactive component contributing to the anti-malarial activity displayed by H11809 acting through the inhibition of GSK3β.
  20. Daungfu O, Youpensuk S, Lumyong S
    Trop Life Sci Res, 2019 Jan;30(1):73-88.
    PMID: 30847034 DOI: 10.21315/tlsr2019.30.1.5
    Citrus canker caused by Xanthomonas citri subsp. citri is a disease affecting the yield and fruit quality of lime (Citrus aurantiifolia). This research investigated endophytic bacteria obtained from six healthy Citrus spp. to inhibit the pathogen and to control citrus canker on lime plants. Numbers of the endophytic bacteria isolated from C. aurantifolia, C. hystrix, C. maxima, C. nobilis, C. reticulata and C. sinensis were 28, 25, 29, 42, 12 and 34 isolates, respectively. The selected endophytic bacteria that were effective against X. citri subsp. citri were Bacillus amyloliquefaciens LE109, B. subtilis LE24 and B. tequilensis PO80. The optimum culture medium for an antagonistic effect on the pathogen in B. amyloliquefaciens LE109 and B. tequilensis PO80 was yeast extract peptone dextrose broth, and in B. subtilis LE24 was modified soluble starch broth. To control citrus canker in lime, young expanded leaves of lime plants were aseptically punctured and inoculated with 30 μl of bacterial suspension of the pathogen (108 CFU/ml in 0.85% NaCl) per punctured location. After the pathogenic inoculation for 24 h, the leaves were then inoculated with 30 μl of the selected endophytic bacteria (108 CFU/ml in 0.85% NaCl), and treated with 30 μl of the culture media containing bioactive compounds produced by the selected endophytic bacteria. The leaves inoculated with cell suspensions of B. amyloliquefaciens LE109 or B. subtilis LE24 could completely control citrus canker. However, the leaves inoculated with B. tequilensis PO80 displayed 10% disease incidence. Additionally, the leaves treated with the crude bioactive compounds of B. amyloliquefaciens LE109 or B. subtilis LE24 could completely control citrus canker. Notably, the leaves treated with the crude bioactive compounds of B. tequilensis PO80 displayed 5% disease incidence. The results of this study showed that the Bacillus strains play important roles in the biocontrol of citrus canker in lime.
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