Displaying publications 1 - 20 of 212 in total

  1. Hamid SA, Rawi CS, Ahmad AH
    Trop Life Sci Res, 2016 Feb;27(1):43-62.
    PMID: 27019681 MyJurnal
    The life history and the influence of environmental parameters on Thalerosphyrus were investigated in two first-order rivers-the Batu Hampar River and the Teroi River of Gunung Jerai, Kedah-in northern peninsular Malaysia. Based on nymphal body length, Thalerosphyrus was found to be trivoltine in both rivers, regardless of the altitudinal difference, but its population abundance was four times higher in the Teroi River, presumably related to its better survival in the lower water temperature. At least nine instars of Thalerosphyrus were detected in the field-collected nymphs. Its life cycle was completed within 2.5-3.0 months, with overlapping cohorts and continual emergence of up to 3 months. The main driving factors of the high abundance of Thalerosphyrus were the water temperature and habitat quality.
  2. Karim NF, Mohd M, Nor NM, Zakaria L
    Trop Life Sci Res, 2016 Feb;27(1):1-20.
    PMID: 27019679 MyJurnal
    Isolates of Fusarium were discovered in peat soil samples collected from peat swamp forest, waterlogged peat soil, and peat soil from oil palm plantations. Morphological characteristics were used to tentatively identify the isolates, and species confirmation was based on the sequence of translation elongation factor-1α (TEF-1α) and phylogenetic analysis. Based on the closest match of Basic Local Alignment Search Tool (BLAST) searches against the GenBank and Fusarium-ID databases, five Fusarium species were identified, namely F. oxysporum (60%), F. solani (23%), F. proliferatum (14%), F. semitectum (1%), and F. verticillioides (1%). From a neighbour-joining tree of combined TEF-1α and β-tubulin sequences, isolates from the same species were clustered in the same clade, though intraspecies variations were observed from the phylogenetic analysis. The Fusarium species isolated in the present study are soil inhabitants and are widely distributed worldwide. These species can act as saprophytes and decomposers as well as plant pathogens. The presence of Fusarium species in peat soils suggested that peat soils could be a reservoir of plant pathogens, as well-known plant pathogenic species such F. oxysporum, F. solani, F. proliferatum, and F. verticillioides were identified. The results of the present study provide knowledge on the survival and distribution of Fusarium species.
  3. Manshor N, Rosli H, Ismail NA, Salleh B, Zakaria L
    Trop Life Sci Res, 2012 Dec;23(2):1-15.
    PMID: 24575229 MyJurnal
    Fusarium is a cosmopolitan and highly diversified genus of saprophytic, phytopathogenic and toxigenic fungi. However, the existence and diversity of a few species of Fusarium are restricted to a certain area or climatic condition. The present study was conducted to determine the occurrence and diversity of Fusarium species in tropical highland areas in Malaysia and to compare with those in temperate and subtropical regions. A series of sampling was carried out in 2005 to 2009 at several tropical highland areas in Malaysia that is: Cameron Highlands, Fraser Hills and Genting Highlands in Pahang; Penang Hill in Penang; Gunung Jerai in Kedah; Kundasang and Kinabalu Park in Sabah; Kubah National Park and Begunan Hill in Sarawak. Sampling was done randomly from various hosts and substrates. Isolation of Fusarium isolates was done by using pentachloronitrobenzene (PCNB) agar and 1449 isolates of Fusarium were successfully recovered. Based on morphological characteristics, 20 species of Fusarium were identified. The most prevalent species occurring on the highlands areas was F. solani (66.1%) followed by F. graminearum (8.5%), F. oxysporum (7.8%), F. semitectum (5.7%), F. subglutinans (3.5%) and F. proliferatum (3.4%). Other Fusarium species, namely F. avenaceum, F. camptoceras, F. chlamydosporum, F. compactum, F. crookwellense, F. culmorum, F. decemcellulare, F. equiseti, F. nygamai, F. poae, F. proliferatum, F. sacchari, F. sporotrichioides, F. sterilihyphosum and F. verticillioides accounted for 1% recoveries. The present study was the first report on the occurrences of Fusarium species on highland areas in Malaysia.
  4. Rosli NA, Isa MM
    Trop Life Sci Res, 2012 Dec;23(2):59-65.
    PMID: 24575234 MyJurnal
    Scanty information exists pertaining to the length-weight relationship (LWR) and length-length relationship (LLR) parameters of longsnouted catfish, Plicofollis argyropleuron in lotic systems throughout the northern part of Peninsular Malaysia. It is vital to reveal these biological properties of P. argyropleuron in Kuala Muda and Merbok estuary for future management and to increase knowledge about this fish stocks. The fish samples were randomly collected in the estuary area of Kuala Muda and Merbok, Kedah for 10 months from March 2009 to December 2009. The values of the exponent b in the LWR equations (W = aL(b) ) were approximately 3, indicating an isometric growth with high correlation coefficient (r(2)). The value of LLR (r(2)>0.9) indicated that they are highly significant and highly correlated. These parameters are essential for evaluating the relative condition of fish and species managements as well as their fisheries and stock assessment.
  5. Ahmed QN, Hussain PZ, Othman AS
    Trop Life Sci Res, 2012 Dec;23(2):17-25.
    PMID: 24575230
    This study was conducted to examine the variabilities in the chronology of vegetative and reproductive development of weedy rice (Oryza spp.) in comparison with commercial varieties. Data at different growth stages of 14 weedy rice morphotypes and 4 commercial rice varieties were recorded and analysed. Plant height of all weedy rice morphotypes were observed to be significantly higher compared to the commercial varieties at every growth stages; increase in height was between 10-37 cm for weedy rice morphotype, for every 2 weeks. Initial tillering ability at 14 days after planting (DAP) was higher in weedy morphotypes, however all the commercial rice varieties produced significantly higher number of tillers throughout the rest of the vegetative phases. Correlation between plant height and tiller number detected that taller plants produce fewer tillers than shorter plants. Higher leaf area index (LAI) of all weedy morphotypes except PWR01 at early growth stages indicated the vigorous growth of the morphotypes. Weedy rice morphotypes showed a wide range of anthesis and maturity duration. Accessions from the same weedy rice morphotypes were more heterogeneous in the flowering, anthesis and maturity period than the commercial varieties. These traits enables identification of weedy rice morphotypes at their different growth stages in the field.
  6. Shahrudin S, Jaafar I
    Trop Life Sci Res, 2012 Dec;23(2):49-57.
    PMID: 24575233 MyJurnal
    The study on the amphibian fauna of Bukit Jana, Taiping, Perak was carried out from January 2009 until December 2010 with a total of 12 nights of observation. Twenty four species of frogs from 14 genera and 6 families were recorded to inhabit the Bukit Jana areas. Seven commensal species were found around human habitations near the foothill whereas the others are typical forest frogs found mostly near the rivers, streams and forest floor. This is the first amphibian checklist of Bukit Jana, Perak and it contributed 22% out of 107 species of frogs that are recorded to inhabit Peninsular Malaysia.
  7. Yin SA, Ismail A, Zulkifli SZ
    Trop Life Sci Res, 2012 Dec;23(2):27-38.
    PMID: 24575231 MyJurnal
    Swamp eel, Monopterus albus is one of the common fish in paddy fields, thus it is suitable to be a bio-monitor for heavy metals pollution studies in paddy fields. This study was conducted to assess heavy metals levels in swamp eels collected from paddy fields in Kelantan, Malaysia. The results showed zinc [Zn (86.40 μg/g dry weight)] was the highest accumulated metal in the kidney, liver, bone, gill, muscle and skin. Among the selected organs, gill had the highest concentrations of lead (Pb), cadmium (Cd) and nickel (Ni) whereas muscle showed the lowest total metal accumulation of Zn, Pb, copper (Cu), Cd and Ni. Based on the Malaysian Food Regulation, the levels of Zn and Cu in edible parts (muscle and skin) were within the safety limits. However, Cd, Pb and Ni exceeded the permissible limits. By comparing with the maximum level intake (MLI), Pb, Ni and Cd in edible parts can still be consumed. This investigation indicated that M. albus from paddy fields of Kelantan are safe for human consumption with little precaution.
  8. Salleh SM, Yobe M, Sah SA
    Trop Life Sci Res, 2012 May;23(1):63-76.
    PMID: 24575226
    The Green Turtle (Chelonia mydas) and Olive Ridley Turtle (Lepidochelys olivacea) are the only sea turtles with recorded landings in the Pulau Pinang coastal area. The Green Turtle has been the most abundant and widely distributed sea turtle in this area since it was first surveyed in 1995. Statistical analysis by the Pulau Pinang Department of Fisheries on the distribution of sea turtles from 2001 through 2009 has identified Pantai Kerachut and Telok Kampi as the most strongly preferred beaches for Green Turtle landings, with records for almost every month in every year. Green Turtle tracks and nests have also been found along the coast of Pulau Pinang at Batu Ferringhi, Tanjong Bungah, Pantai Medan, Pantai Belanda, Telok Kumbar, Gertak Sanggul, Moonlight Beach, Telok Duyung, Telok Aling, Telok Bahang and Telok Katapang. The Olive Ridley Turtle is present in smaller numbers; landing and nesting have only been recorded on a few beaches. There are no previous records of Olive Ridley landings at Pantai Kerachut and Telok Kampi, but tracks and nests have been found at Telok Kumbar, Tanjong Bungah, Pantai Medan, Telok Duyung and Gertak Sanggul. A Turtle Conservation Centre has been established at Pantai Kerachut to protect these species from extinction in Pulau Pinang. This paper presents details of the records and distribution of sea turtles in Pulau Pinang from 1995 through 2009.
  9. Aliakbarpour H, Rawi CS
    Trop Life Sci Res, 2012 May;23(1):45-61.
    PMID: 24575225 MyJurnal
    A field study was conducted at two localities on Pulau Pinang, Malaysia, during two consecutive mango flowering seasons in 2009 to identify variations in the species composition of thrips infesting treated and untreated mango (Mangifera indica L.) orchards. The CO2 immobilisation technique and the cutting method were used to recover different thrips species from mango panicles and weed host plants, respectively. The mango panicles and various weed species within the treated orchard were found to harbour four thrips species from the family Thripidae. These species were identified as Thrips hawaiiensis (Morgan), Scirtothrips dorsalis (Hood), Frankliniella schultzei (Trybom) and Megalurothrips usitatus (Bagnall). The weed species Mimosa pudica, Cleome rutidosperma, Echinochloa colonum, Borreria laevicaulis, Veronia cinerea and Asystasia coromandeliana served as additional hosts to these thrips. Six thrips species were found in the untreated orchard. These species included Thrips palmi (Karny), Haplothrips sp. (Amyot and Serville) and the four thrips species found in the treated orchard. A brief description of the larvae for each genus is provided.
  10. Muhamad H, Sahid IB, Surif S, Ai TY, May CY
    Trop Life Sci Res, 2012 May;23(1):15-23.
    PMID: 24575222 MyJurnal
    The palm oil industry has played an important role in the economic development of Malaysia and has enhanced the economic welfare of its people. To determine the environmental impact of the oil palm seedling at the nursery stage, information on inputs and outputs need to be assessed. The oil palm nursery is the first link in the palm oil supply chain. A gate-to-gate study was carried out whereby the system boundary was set to only include the process of the oil palm seedling. The starting point was a germinated seed in a small polyethylene bag (6 in × 9 in) in which it remained until the seedling was approximately 3 to 4 months old. The seedling was then transferred into a larger polyethylene bag (12 in × 15 in), where it remained until it was 10-12 months old, when it was planted in the field (plantation). The functional unit for this life cycle inventory (LCI) is based on the production of one seedling. Generally, within the system boundary, the production of an oil palm seedling has only two major environmental impact points, the polybags used to grow the seedling and the fungicide (dithiocarbamate) used to control pathogenic fungi, as both the polybags and the dithiocarbamate are derived from fossil fuel.
  11. Mansor MS, Sah SA
    Trop Life Sci Res, 2012 May;23(1):1-14.
    PMID: 24575221 MyJurnal
    Bird surveys were conducted in the Bukit Kepala Gajah limestone area in Lenggong, Perak from July 2010 to January 2011. The study area was divided into three zones: forest edge, forest intermediate and forest interior. A point-count distance sampling method was used in the bird surveys. The study recorded 7789 detections, representing 100 bird species belonging to 28 families. Pycnonotidae, Timaliidae and Nectariniidae were the dominant families overall and showed the highest number of observations recorded in the study area whereas Motacillidae showed the fewest observations. The bird species were grouped into three feeding guilds: insectivores, frugivores and others (omnivores, carnivores, nectarivores and granivores). The species richness of insectivorous birds differed significantly among the forest zones sampled (Kruskal-Wallis: α=0.05, H=10.979, d.f.=2, p=0.004), with more insectivorous birds occurring in the forest interior. No significant differences were found among the zones in the species richness of either the frugivore guild or the composite others guild.
  12. Juperi S, Zakaria R, Mansor A
    Trop Life Sci Res, 2012 May;23(1):35-44.
    PMID: 24575224 MyJurnal
    To investigate the distribution of Anacardiaceae in Teluk Bahang Permanent Forest Reserve (TBPFR) in Pulau Pinang, all trees with a diameter at breast high (DBH) ≥ 5 cm were enumerated in a study site constituting 0.4 ha of the reserve. Seventy five individuals of Anacardiaceae (14% of all trees) are recorded. These individuals represent 4 genera and 5 species, namely, Mangifera pentandra, Mangifera macrocarpa, Gluta elegans, Campnosperma auriculatum and Swintonia floribunda. The mean density of Anacardiaceae within the study plots is 7.50±8.14 (mean±S.D.) per ha whereas the basal area (BA) calculated is 0.97 m(2)/0.40 ha. The importance value (IVi) for Anacardiaceae is 81%. The estimated total aboveground biomass (TAGB) for Anacardiaceae is 24.24 ton/0.40 ha. A total of 333 Anacardiaceae saplings with a DBH < 5 cm are recorded. These saplings have been identified as juveniles of the genera Gluta (9.99%), Swintonia (84.90%) and Mangifera (5.11%).
  13. Kua BC, Rashid NM
    Trop Life Sci Res, 2012 May;23(1):87-92.
    PMID: 24575228 MyJurnal
    A total of six wild broodstocks of tiger prawns, Penaeus monodon, were found positive for White Spot Virus (WSV) with an IQ2000 detection kit. Using histopathology, the intranuclear inclusion of haemocyte due to WSV infection was observed in the epithelium cells of the antennal gland, stomach and gills. This result confirmed that the wild broodstocks were positive with WSV without showing any white spot. Additionally, histopathological examination also revealed an accumulation of haemocytes around the hepatopancreatic tubules resulting from bacterial infection. Encapsulation and nodule formation, as well as related necrosis, were also observed around the hepatopancreatic tubules infected with a metazoan parasite. Encysted tylocephalum larval cestodes were observed in the hepatopancreas, with haemocytic aggregation being observed around the infected tubules. These findings showed some bacterial and parasitic infections which, in addition to the viral infection itself, could contribute to the 80% mortality rate in wild broodstocks infected with WSV.
  14. Al-Shami SA, Rawi CS, Ahmad AH, Nor SA
    Trop Life Sci Res, 2012 May;23(1):77-86.
    PMID: 24575227
    Chironomus javanus (Kieffer) and Chironomus kiiensis Tokunaga were redescribed from materials collected from a rice field in Pulau Pinang, Malaysia. The larvae can only be distinguished after careful preparation and examination using a compound microscope, but the pupae were not useful to differentiate C. javanus from C. kiiensis. The adult specimens showed clear body and wing characteristics for rapid and accurate identification.
  15. Zakaria L, Hsuan HM, Salleh B
    Trop Life Sci Res, 2011 Dec;22(2):93-101.
    PMID: 24575220
    Mating studies were conducted on 78 isolates of Fusarium species section Liseola from rice, sugarcane and maize. From the crosses with tester strains of Gibberella fujikuroi species complex, 64.1% (50 out of 78 isolates) were cross-fertile with tester strains of mating populations A to E. The results of the mating studies showed that of the 50 isolates, 19 belonged to mating population A (Gibberella moniliformis), 18 to mating population B (Gibberella sacchari), 4 to mating population E (Gibberella subglutinans), 6 to mating population D (Gibberella intermedia) and 3 to mating population C (G. fujikuroi). Identification of several mating populations from rice, sugarcane and maize could be important biological entities under field conditions.
  16. Hussain Z, Man A, Othman AS
    Trop Life Sci Res, 2011 Dec;22(2):1-11.
    PMID: 24575213 MyJurnal
    Weedy rice (WR) is the most significant weed in direct-seeded fields. It has morphological characteristics similar to those of cultivated rice varieties. WR is more difficult to control than other weeds. We collected WR accessions from four sites within the Pulau Pinang rice growing areas. Thirty six different accessions were collected from each site: B, the northern site; P, the central site; A, the southern site; and N, the southwestern site. Wild rice (Oryza rufipogon), which grows in the sampled areas, was also collected together with four varieties (MR84, MR185, MR211 and MR219) that have been widely planted in these areas for a long period of time. The objective of this study was to compare the morphological characteristics of the WR accessions and cultivated rice. Twenty characteristics were observed for the comparison of WR accessions and rice cultivars. Morpho-matrix analyses allowed the specimens to be grouped to two main groups (A and B), based on a 95% dissimilarity matrix. Group A was subdivided into 7 subgroups consisting of a few WR accessions, wild rice and MR211 (control), and group B was subdivided to 10 subgroups consisting of other WR accessions and the 3 other control varieties. Dendrogram analysis indicated that the morphological traits used in this study were able to differentiate among the WR accessions and the cultivars, except for rice cultivar MR211 and WRA8, which grouped together in subgroup A2. STRUCTURE program analysis indicated that all individuals were distinguishable and were divided into 18 clusters. These results suggest that some genes of the WR accessions have been influenced by commercial varieties. The information gained from this study will be useful to develop rice weed management protocols and good agricultural practices to control WR in the future.
  17. Akinboro A, Mohammed K, Rathnasamy S, Muniandy VR
    Trop Life Sci Res, 2011 Dec;22(2):23-35.
    PMID: 24575215 MyJurnal
    Unwanted side effects from a polluted water body may not be limited to the flora and fauna, they may also be transferred to the organisms along the food chain. Four water samples collected immediately and five days after rainfall from two locations inside the polluted Sungai Dua River (SGD) were tested for toxicity using the Allium cepa assay. The samples were analysed for metal content and were both macroscopically and microscopically evaluated. The water samples contained more sodium (Na(+)) and calcium (Ca(2+)) than the control tap water, and they showed root growth and mitotic inhibitions (MI) in A. cepa. However, the inhibitory effects were not dose-dependent. No chromosomal aberration (CA) was induced at 100.00% (undiluted water sample). These results suggest the water samples from SGD had weak mitodepressive and genotoxic effects on the A. cepa cells.
  18. Azman NM, Latip NS, Sah SA, Akil MA, Shafie NJ, Khairuddin NL
    Trop Life Sci Res, 2011 Dec;22(2):45-64.
    PMID: 24575217 MyJurnal
    The diversity and the feeding guilds of birds in three different habitats (secondary forest, oil palm plantation and paddy field) were investigated in riparian areas of the Kerian River Basin (KRB), Perak, Malaysia. Point-count observation and mist-netting methods were used to determine bird diversity and abundance. A total of 132 species of birds from 46 families were recorded in the 3 habitats. Species diversity, measured by Shannon's diversity index, was 3.561, 3.183 and 1.042 in the secondary forest, the paddy field and the oil palm plantation, respectively. The vegetation diversity and the habitat structure were important determinants of the number of bird species occurring in an area. The relative abundance of the insectivore, insectivore-frugivore and frugivore guilds was greater in the forest than in the monoculture plantation. In contrast, the relative abundance of the carnivore, granivore and omnivore guilds was higher in the plantation. The results of the study show that the conversion of forest to either oil palm plantation or paddy fields produced a decline in bird diversity and changes in the distribution of bird feeding guilds.
  19. Shafie NJ, Sah SA, Latip NS, Azman NM, Khairuddin NL
    Trop Life Sci Res, 2011 Dec;22(2):13-22.
    PMID: 24575214 MyJurnal
    We present an assessment of the diversity of Malaysian bats at two contrasting habitat types (secondary forest and oil palm plantation) along the Kerian River surveyed between February 2009 and February 2010. Three hundred and twenty nine individual bats from 13 species representing 4 families were recorded using 10 mist nets. The most commonly caught bat in the secondary forest was Cynopterus brachyotis (n=75), followed by Macroglossus minimus (n=10). Meanwhile, in the oil palm plantation, the most commonly caught bat was Cynopterus brachyotis (n=109), followed by Cynopterus horsfieldi (n=76). The netting efforts were equal for both habitat types. The total sampling nights for each habitat type was 5460. The oil palm plantation had a greater bat abundance that was significantly different from that of the secondary forest, with 209 and 120 individuals, respectively (Mann-Whitney U-test = 31.5, p<0.05). Our results suggest that there is no significant difference in species richness between the two sites. However, the invasion by disturbance-associated species of the secondary forest is indicative of negative effects on the forest and animal diversity in this area. Forest managers should consider multiple measures of forest fragmentation sensitivity before making any forest management decisions.
  20. Mansor MS, Sah SA, Koon LC, Rahman MA
    Trop Life Sci Res, 2011 Dec;22(2):65-80.
    PMID: 24575218 MyJurnal
    Bird surveys were conducted in the Padawan Limestone Area for seven days at each of two study sites, Giam and Danu, from August to December 2008. The purpose of the study was to compare the area's bird species richness and abundance of bird species in other limestone areas and in other forest types. The study also compared the species richness and relative abundance of birds in undisturbed and disturbed areas at both study sites. Twenty mist nets were deployed for 12 hours daily. During this study period, direct observations of birds were also made. In all, 80 species from 34 families were recorded at both sites. At Giam, 120 birds were mist-netted. These birds represented 31 species from 16 families. The direct observations at Giam recorded 13 species from 11 families. In the undisturbed area, 21 species from 13 families were mist-netted, whereas in the disturbed area, 21 species from 10 families were mist-netted. In Danu, a total of 48 birds, representing 25 species from 12 families, were mist-netted. The observations at Danu recorded 34 species from 19 families. Twelve species from 7 families were mist-netted in the undisturbed area, whereas 18 species from 11 families were mist-netted in the disturbed area. Statistical analysis showed that the species diversity index differed significantly between undisturbed and disturbed areas.
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