Heterologous prime-boost immunisation strategies can evoke powerful antibody responses and may be of value in developing an improved malaria vaccine. Herein, we show that an immunisation protocol that primes Balb/c mice with a recombinant Bacille Calmette-Guérin (rBCG) vaccine consisting of a plasmid encoding a synthetic fragment of the ESAT-6 epitope of Mycobacterium tuberculosis, the fragment 2 region II of erythrocyte-binding antigen (F2RIIEBA) and the three repeat sequences of the circumsporozoite protein (NANP)3 of Plasmodium falciparum before subsequently boosting the mice with either two doses of the rBCG clone or with a DNA vaccine expressing the native form of F2RIIEBA generating higher serum anti-F2RIIEBA antibody levels than an immunisation protocol that calls for a homologous prime-boost with two doses of rBCG. These results demonstrate the potential of DNA vaccination in boosting the antibody response to a recombinant vaccine expressing multiple epitopes.
Ornate threadfin bream (Nemipterus hexodon) is an economically important fishery species in Southeast Asia. In Thailand, N. hexodon decreased dramatically due to overexploitation for commercial purposes. To construct an effective sustainable management plan, genetic information is necessary. Thus, in our study, the population genetic structure and demographic history of N. hexodon were investigated using 419 bp of the mitochondrial DNA sequence in cytochrome oxidase subunit I gene (mtDNA COI). A total of 142 samples was collected from nine localities in the Gulf of Thailand (Chonburi, Samut Songkhram, Surat Thani, Nakhon Si Thammarat, Songkhla), and the Andaman Sea (Satun, Trang, Krabi, Phang Nga). Fourteen polymorphic sites defined 18 haplotypes, revealing a high haplotype diversity and low nucleotide diversity among nine localities. The analysis of molecular variance (AMOVA) analysis, pairwise F ST , and minimum spanning network result revealed that the genetic structure of N. hexodon was separated into two populations: the Gulf of Thailand and the Andaman Sea population. The genetic structure of N. hexodon can be explained by a disruption of gene flow from the geographic barrier and the Pleistocene isolation of the marine basin hypothesis. Neutrality tests, Bayesian skyline analysis, mismatch distribution, and the estimated values of population growth suggested that N. hexodon had experienced a population expansion. The genetic information would certainly help us gain insight into the population genetic structure of N. hexodon living on the coast of Thailand.
Homalomena galbana Baharuddin S. & P.C. Boyce is described from the Maliau Basin Conservation Area, Sabah, representing the first species of the Homalomena Supergroup to be recorded from Sabah, and the first mesophytic species of the Supergroup to be described from Borneo. The species is illustrated and a brief discussion on the pollination role of interpistillar staminodes is presented.
Rhaphidophora megasperma Engl., a species hitherto regarded as endemic to Sarawak, East Malaysia, is published as a new record for Peninsular Malaysia. It is the first species in the Rhaphidophora Spathacea group recorded for western Sunda. The species is illustrated and a key to the perforate-laminated Rhaphidophora in Peninsular Malaysia is presented.
Sabah contributes 4.2 million hectares to the total Heart of Borneo (HoB) areas. Some of the forest reserves in the HoB are newly gazetted as Totally Protected Forest. Hence, their mammal diversity has to be comprehensively documented. This study aims to record the presence of terrestrial mammal species, and assess the prevalence of poaching in selected forest reserves within the Sabah HoB area. A total of 15 forest reserves were surveyed within a 5-year timeframe which recorded 60 terrestrial mammal species, including 21 Bornean endemics. The variation in total enumerated mammal species in the study sites may be derived from unequal sampling efforts, geographical factors and anthropogenic influences. The intensity of poaching within the study sites is high. Though this study is a rapid assessment, it created baseline information for mammal diversity in some of the least studied forest reserves in Sabah, important for conservation of its terrestrial mammals.
Collembola (springtails) is an important soil biology indicator to monitor toxicity or ecological disturbances in the ecosystem. The impact of Bacillus thuringiensis (Bt) rice cv Rojolele events expressing Cry1B-Cry1Aa driven by the maize ubiquitin promoter resistant to yellow rice stem borer (YSB, Scirpophaga incertulas Walker) on non-target Collembola community was assessed. The experiment was performed at four locations under confined field trials according to the Indonesia's environmental safety regulation on genetically engineered crops. Six transgenic rice events were tested with non-transgenic Rojolele and the moderately resistant IR42 rice varieties as controls. The experimental design was randomised block design with three replicates. Collembola were collected from the bunds between plots using pitfall and Berlese funnel traps at seedling, vegetative and generative stages, as well as at harvesting time. The results showed that Collembola abundance and diversity were significantly affected by both experimental sites and observation times. However, no significant differences in Collembola diversity and abundance between Bt rice and non-Bt controls were observed. Thus, we can conclude that the cultivation of the Bt rice cv Rojolele events expressing Cry1B-Cry1Aa protein fusion do not adversely affect biodiversity and abundance of Collembola at the four confined rice fields.
Paederus fuscipes Curtis is a nocturnal insect. The attractiveness of artificial
light sources from residential premises eventually causes the risk of severe dermatitis
effect, once Paederus is in contact with human skin. The objective of this study is to
investigate whether the light and height factors of residential buildings and its’ association
to rice cultivation phases are primary reasons for P. fuscipes’s mass dispersal into human
residential areas. The study site was located in residential premises that were built
adjacent to rice field areas (≈ 32–60 m and 164 m) north of the rice field located in Teluk
Air Tawar, mainland of Pulau Pinang. Overall, both light sources and rice cultivation
phases caused a significant effect for P. fuscipes beetles dispersal flight to invade human
settlements. More P. fuscipes were captured near the bright light source with the highest
number of beetles found during harvesting stage. Whereas, significantly higher number of
P. fuscipes were captured at level 2 and 3 compared to ground and level 1 of the
apartment building and P. fuscipes was also found significantly affected by the rice
cultivation phases at different elevation levels. This indicates that bright light sources and
higher elevation levels are the main factors in attracting P. fuscipes beetles to disperse
and causes infestations in residential areas. This finding could create awareness among
the public on P. fuscipes dispersal pattern.
An early step in the Agrobacterium-mediated transformation of Phalaenopsis violacea orchid was investigated to elucidate the plant-bacterium interaction. Directed movement in response to chemical attractants is of crucial importance to Agrobacterium tumefaciens strains. Chemotaxis of A. tumefaciens strains (EHA 101 and 105) towards wounded orchid tissues has been studied by using swarm agar plates. The results obtained indicate a minor role for chemotaxis in determining host specificity and suggest that it could not be responsible for the absence of tumourigenesis in P. violacea orchid under natural conditions. The spectrometric GUS and green fluorescent protein (GFP) assays provided information on the amount of inoculated A. tumefaciens that effectively bound to various orchid tissues. It can be concluded that, at least during the two early steps of interaction, A. tumefaciens appears to be compatible with P. violacea, indicating a potential basis for genetic transformation.
"Terung asam" Sarawak (Solanum lasiocarpum Dunal) is an underutilised fruit vegetable. Information on the fruit growth is very lacking. Thus, this study was conducted to characterise fruit growth pattern based on physical characters and cellular structures. Data were recorded weekly from fruit set until senescence. All the morphological growth of "terung asam" fruit exhibits a single sigmoid growth pattern that fitted well to logistic model. There are three distinct phases of growth, i.e., S1, S2 and S3. At S1, the size of fruit cells was small without intercellular spaces. As fruit grew to S2, cell size increased with distinct vascular tissues. By S3, fruit has achieved its maximum size with green peel turn to yellow and finally golden yellow at late S3. Cuticle and two types of trichomes formed the outer layer of fruit. The thickness of fruit exocarp increased while density of trichomes decreased as fruit developed.
Seven pathotypes of Pyricularia oryzae were differentiated from blast disease samples collected from 2014–2016, using eight Malaysian differential rice varieties. Pathotype P7.0 is the dominant pathotype identified (33.9%) followed by P0.0, P1.0 and P9.0 which are currently become more abundant in the field with frequency of 20.0% for P0.0, and 15.4% for both P1.0 and P9. Pathotype P7.0 was mostly isolated from MR220CL2, MR263 and MR219 rice varieties which are popular variety planted by farmers in Peninsular Malaysia. Interestingly, new emergence of pathotype P0.2 has been identified, which was isolated from a new released variety, MR284 as well as blast isogenic line IRBL 20 carrying Pi5(t) blast resistance gene. Prolong planting of more than 20 planting seasons and large scale planting of MR219 and MR220 with current varietal coverage areas of more than 90% in Peninsular Malaysia are suspected as possible reason for P7.0 become dominant. Varietal coverage of MR220CL2 and MR263 has reached about 50% might be the cause of changes in blast pathogen pathotype dominancy to P0.0, P1.0 and P9.0.
Helopeltis antonii is the major pest affecting cashew plants in Indonesia and causes potential damage to the plant. The development of the population was influenced by the fecundity and fertility of their eggs. The effect of mating on the eggs’ fecundity and the fertility of H. antonii was studied. Laboratory studies at Wonogiri Estate Service in Ngadirojo District, Wonogiri, Indonesia investigated the sexual maturity, the influence of female to male sex ratio on the females’ fecundity and longevity, and the influence of mating frequency to fecundity and the eggs hatchability of H. antonii. The study reveals that H. antonii females and males are ready to mate when they are two days old. The number of eggs laid and the longevity of the females’ lives were not significantly affected by the sex ratio; however, female to male sex ratios of 2:1 and 1:2 tended to produce a greater number of eggs. The fecundity of the female was not significantly influenced by the number of times the female mated. Unmated females laid fewer eggs than females paired with a mature male. The study shows that females need to mate to produce fertile eggs.
Genes related to carbohydrate metabolism have evolved rapidly in eusocial bees, including honey bees. However, the characterisation of carbohydrate metabolism genes has not been reported in Apis andreniformis or Apis cerana indica. This study aimed to characterise phosphofructokinase (PFK) and pyruvate kinase (PK) genes in these honey bee species and to analyse the evolution of the genus Apis using these genes. This study found the first data regarding A. andreniformis PFK and PK-like nucleotide sequences. A BLAST-n algorithm-based search showed that A. andreniformis and A. c. indica PFK and PK genes were homologous with those of Apis florea and Apis cerana cerana from Korea, respectively. Multiple alignments of PFKs from five Apis species showed many exon gains and losses, but only one among the PKs. Thus, the exon-intron organisation of the PK genes may be more conserved compare with that of the PFKs. Another evolutionary pattern indicated that more nucleotide substitutions occurred in Apis' PK than PFK genes. Deduced PFK amino acid sequences revealed a PFK consensus pattern of 19 amino acids, while the deduced PK amino acid sequences were predicted to have barrel and alpha/beta domains. Based on these two metabolism-related genes, The Neighbour-joining and Maximum likelihood phylogenetic trees are congruent and revealed that the A. andreniformis and A. florea group were in the basal position. Apis mellifera, A. cerana, and Apis dorsata formed a monophyletic clade, although the positions of A. mellifera and A. dorsata were different in the nucleotide- and amino acid-based phylogenetic trees.
Probiotics are live microorganisms that can be found in fermented foods and cultured milk, and are widely used for the preparation of infant food. They are well-known as "health friendly bacteria", which exhibit various health beneficial properties such as prevention of bowel diseases, improving the immune system, for lactose intolerance and intestinal microbial balance, exhibiting antihypercholesterolemic and antihypertensive effects, alleviation of postmenopausal disorders, and reducing traveller's diarrhoea. Recent studies have also been focused on their uses in treating skin and oral diseases. In addition to that, modulation of the gut-brain by probiotics has been suggested as a novel therapeutic solution for anxiety and depression. Thus, this review discusses on the current probiotics-based products in Malaysia, criteria for selection of probiotics, and evidences obtained from past studies on how probiotics have been used in preventing intestinal disorders via improving the immune system, acting as an antihypercholesterolemic factor, improving oral and dermal health, and performing as anti-anxiety and anti-depressive agents.
Seahorse diversity (genus Hippocampus, Family Syngnathidae), species identification, size composition and sexual dimorphism were studied from November 2012 to March 2013 in selected coastal waters around Kota Kinabalu, Sabah and the local market trade. Six species of seahorses were identified in the study: (1) Hippocampus barbouri, (2) Hippocampus comes, (3) Hippocampus kelloggi, (4) Hippocampus kuda, (5) Hippocampus spinosissimus and (6) Hippocampus trimaculatus. All six species were sold at the local market, and the dried seahorses were obtained mainly by local fishermen using trawl by-catch method and traded as traditional medicine, souvenirs and other uses. Four species were identified by direct samplings in various different habitats of Kota Kinabalu coastal waters: (1) H. barbouri, (2) H. comes, (3) H. kuda, and (4) H. spinosissimus. Based on the results, H. comes was the largest in size among the four fresh/live species found (mean standard length [SL]: 148.25±1.26 mm), whereas H. barbouri was the smallest species (mean SL: 129±7.81 mm). For the dried samples, H. kelloggi was the largest (mean SL: 245.25±14.55 mm) and H. barbouri was the smallest (mean SL: 127.21±10.01 mm). No significant difference (p>0.05) was observed between the lengths of males and females in every seahorse species, and there was no sexual size dimorphism in any of the species. The findings from the study are significant to provide baseline data for the conservation efforts of these unique marine teleost.
This study aimed at determining the effects of propagation medium and cutting types on the early growth performance of fig (Ficus carica L.) root and shoot. The experiment was conducted at the Glasshouse and Nursery Complex (GNC), International Islamic University Malaysia (IIUM). The split-plot design was employed with the main plot (propagation medium) and sub-plot (types of cutting). The propagation medium were sand:topsoil (1:3) (M1), topsoil:peat:sawdust (1:1:1) (M2) and peat:perlite (1:1) (M3). Two types of cutting were semi-hardwood (C1) and hardwood (C2). As a result, there were a significant effect of propagation medium on measured parameters. This study revealed that the most effective propagation medium and cutting types for the propagation of fig were a combination of peat and perlite at 1:1 ratio (M3) and hardwood cutting (C2), respectively as evidenced by significantly higher root and shoot growth quality as compared to other treatments.
Penentuan jantina burung adalah penting untuk tujuan kajian ekologi dan biologi evolusi, serta program pembiakan dan konservasi terutamanya bagi burung yang mempunyai ciri monomorfik. Bagi burung pungguk jelapang Tyto alba, pengesahan jantina adalah penting untuk konservasi serta program pengenalan bagi kawalan tikus perosak. Penentuan jantina secara molekular untuk subspesies Asia Tenggara, Tyto alba javanica, telah dijalankan menggunakan Reaksi Rantai Polimerase (PCR) diikuti 3% gel agaros elektroforesis. Primer P2/P8 and 2550F/2718R untuk amplifikasi gen CHD (Chromo Helicase DNA-binding gene) diuji dan kedua-dua set primer memberi keputusan yang berjaya. Set primer 2550F/2718R memberi hasil yang lebih baik kerana jurang di antara jalur berganda lebih terang. DNA yang diekstrak dari darah, darah yang dicairkan, serta DNA yang diekstrak dari bulu burung digunakan untuk menentukan jantina burung. DNA yang diekstrak dari bulu memberi keputusan yang kurang memuaskan akibat pencemaran serta kuantiti DNA yang rendah. Penentuan jantina menggunakan darah yang dicairkan merupakan kaedah yang menjimatkan kos serta masa. Penjujukan gen CHD dari Tyto alba javanica menunjukkan 98% hingga 99% kesamaan identiti bila dibandingkan gen CHD Tyto alba alba.
The herpetofauna of Beris Valley, Kedah, Malaysia, was studied using a rapid assessment survey during a scientific expedition organised by the School of Biological Sciences at the Universiti Sains Malaysia, from 14-17 August 2009. All amphibians and reptiles were observed and captured during the four-day survey along the ditches, roads, dam areas, swamps, forest trails and streams. The results showed that 14 species of amphibians from 9 genera and 5 families inhabit the area, and 7 species of lizards, 5 species of snakes and 2 species of freshwater turtles were also present in the area. Fejervarya limnocharis and Microhyla butleri seemed to be the most common amphibians, while Hemidactylus frenatus and Varanus salvator were the most common reptiles in the area. This report constitutes a preliminary checklist and first record of amphibians and reptiles in Beris Valley, Kedah. The number of specimens was less than expected because of the very short survey period, but we hope to record more species in future studies.
The study on the amphibian fauna of Bukit Jana, Taiping, Perak was carried out from January 2009 until December 2010 with a total of 12 nights of observation. Twenty four species of frogs from 14 genera and 6 families were recorded to inhabit the Bukit Jana areas. Seven commensal species were found around human habitations near the foothill whereas the others are typical forest frogs found mostly near the rivers, streams and forest floor. This is the first amphibian checklist of Bukit Jana, Perak and it contributed 22% out of 107 species of frogs that are recorded to inhabit Peninsular Malaysia.
A total of 37 fish species from 14 families were observed during surveys conducted from January to March 2005 at 8 selected streams near the Gunung Jerai Forest Reserve. The list includes two species (Rasbora trilineata and Systomus partipentazona) that were visually identified at the lower part of the Sungai Teroi stream. Single specimens of Leiocassis micropogon, Clarias macrocephalus and Hampala macrolepidota were also obtained at certain sampling stations. Devario regina and Systomus binotatus were the most abundant species at all sampling stations. However, the list is still incomplete as the study was carried out over a short time period and there are large areas that have not yet been surveyed. The presence of exotic species (Carassius auratus) at Sungai Badak indicates anthropogenic influences. Therefore, a long-term monitoring program for Gunung Jerai Forest Reserve streams should be planned and carried out to assess the impacts of future development on fish biodiversity and water quality.