Katabatic winds dramatically affect the polar climate. Their activity depends on density of air and temperature in the source region. This paper presents for first time an analysis of the precipitable water vapour (PWV) variability and its relation to a katabatic event at Scott Base station, Antarctica. A significant effect in their characteristics toward calculation of a reliable user accuracy in GPS applications is addressed. Our investigations using the data between 21st and 30th of November 2002 showed that the PWV profile exhibited an irregular pattern with a maximum value of 7.38 mm (~ 6 mm on average), and was more strongly influenced by relative humidity than by wind speed activity. The dominant wind flow during this period was from the North-Northeast (blowing from the Ross Sea) with a median speed of 4.96 ms–1. The PWV was high when the temperature was between –15ºC and –11ºC. During the dates identified as a katabatic event between 21:30 UT of 28th November and 18:40 UT on 29th November, the wind blew from the Southeast-South direction (from the Ross Ice Shelf) with a maximum speed of 10.92 ms–1. The PWV increased ~1.4 mm (23%) from the mean value, indicating severe wind during this event which had pronounced effect on GPS observations.