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Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani

Khayi S 1 , Blin P 2 , Pédron J 3 , Chong TM 4 , Chan KG 5 , Moumni M 6 Show all authors , Hélias V 7 , Van Gijsegem F 8 , Faure D 9

Affiliations 

  • 1 Institute for Integrative Biology of the Cell (I2BC), CNRS CEA Univ. Paris-Sud, Université Paris-Saclay, Saclay Plant Sciences, Avenue de la Terrasse, 91198, Gif-sur-Yvette cedex, France. slimane.khayi@i2bc.paris-saclay.fr
  • 2 Institute for Integrative Biology of the Cell (I2BC), CNRS CEA Univ. Paris-Sud, Université Paris-Saclay, Saclay Plant Sciences, Avenue de la Terrasse, 91198, Gif-sur-Yvette cedex, France. Pauline.Blin@i2bc.paris-saclay.fr
  • 3 UPMC Univ Paris 06, UMR 7618, IEES Paris (Institute of Ecology and Environmental Sciences), 7 Quai Saint bernard, 75005, Paris, France. jacques.pedron@upmc.fr
  • 4 Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia. cluster1986@hotmail.com
  • 5 Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia. kokgan@um.edu.my
  • 6 Université Moulay Ismaïl, Faculté des Sciences, Département de Biologie, Meknès, Morocco. mmoumni02@yahoo.fr
  • 7 Fédération Nationale des Producteurs de Plants de Pomme de Terre-Recherche développement Promotion du Plant de Pomme de Terre (FN3PT-RD3PT), 75008, Paris, France. valerie.helias@fnpppt.fr
  • 8 INRA, UMR 1392, IEES Paris (Institute of Ecology and Environmental Sciences), 7 Quai Saint Bernard, 75005, Paris, France. frederique.van_gijsegem@agroparistech.fr
  • 9 Institute for Integrative Biology of the Cell (I2BC), CNRS CEA Univ. Paris-Sud, Université Paris-Saclay, Saclay Plant Sciences, Avenue de la Terrasse, 91198, Gif-sur-Yvette cedex, France. denis.faure@i2bc.paris-saclay.fr
BMC Genomics, 2015;16:788.
PMID: 26467299 DOI: 10.1186/s12864-015-1997-z

Abstract

Dickeya solani is an emerging pathogen that causes soft rot and blackleg diseases in several crops including Solanum tuberosum, but little is known about its genomic diversity and evolution.

* Title and MeSH Headings from MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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