Displaying publications 81 - 100 of 371 in total

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  1. Khounani Z, Hosseinzadeh-Bandbafha H, Nizami AS, Sulaiman A, Goli SAH, Tavassoli-Kafrani E, et al.
    Data Brief, 2020 Feb;28:104933.
    PMID: 31886362 DOI: 10.1016/j.dib.2019.104933
    In order to develop a product sustainably, multiple analyses, including comprehensive environmental assessment, are required. Solar-assisted production of walnut husk methanolic extract (WHME) as a natural antioxidant for biodiesel was scrutinized by using the life cycle assessment (LCA) approach. More specifically, the environmental sustainability of WHME antioxidant was evaluated and compared to that of propyl gallate (PG), the most widely used synthetic biodiesel antioxidant, under two scenarios. Additionally, supplementary files including the inventory data consisting of raw data as well as elementary flows, mid-point, and end-point categories are presented. The analysis of scenarios revealed that the use of the natural antioxidant and the avoidance of the chemical antioxidant in biodiesel fuel could be regarded as an eco-friendly approach substantially enhancing the environmental friendliness of biodiesel in particular in terms of human health. Furthermore, given the waste-oriented nature of WHME, the scenario involved its application could serve as a promising strategy to simultaneously valorize the agro-waste and generate a value-added product; a move toward implementing the circular economy approach in the biodiesel industry.
  2. Karirat T, Saengha W, Deeseenthum S, Ma NL, Sutthi N, Wangkahart E, et al.
    Data Brief, 2023 Oct;50:109474.
    PMID: 37600590 DOI: 10.1016/j.dib.2023.109474
    This data evaluated the capacity of Bacillus spp. isolated from Thai milk kefir to produce exopolysaccharide (EPS) on cassava pulp and tested its antioxidant and antibacterial properties. Thailand's starch industry generates million tons of cassava pulp, which is underutilized or bio-transformed into higher-value bioproducts. Antioxidant and antibacterial bacterial exopolysaccharides are beneficial in the food, feed, pharmaceutical, and cosmetic industries. Moisture, ash, fat, protein, fiber, starch, sugar, neutral detergent fiber (NDF), acid detergent fiber (ADF), and acid detergent lignin (ADL) were analyzed from cassava pulp as an EPS substrate. After 3 days of bacterial fermentation, EPS generation, culture pH, reducing sugar amount, and bacterial count were recorded. Antioxidant activities and bioactive content including hydroxyl radical scavenging activity, 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging activity, ferric reducing antioxidant power (FRAP), total phenolic and flavonoid content (TPC and TFC), and antimicrobial activity against two Nile tilapia pathogens (Streptococcus agalactiae and Staphylococcus aureus) from different Bacillus species were evaluated. Proximate analysis, dinitrosalicylic acid assay, pH value record, bacterial count using spread plate method, antioxidant activity and bioactive content assays via spectrophotometry, and agar disk diffusion were the main approaches. This study used microbial cell factories to convert agro-biowaste, such as cassava pulp, into EPS bioproducts which accords with a bio-circular green economy model.
  3. Elochukwu H, Sia LKSL, Gholami R, Hamid MA
    Data Brief, 2018 Dec;21:972-979.
    PMID: 30426054 DOI: 10.1016/j.dib.2018.10.055
    Data presented in this article focused on the application of Methyl Ester Sulphonate (MES) surfactant and nanopolystyrene in water based drilling fluid. Data from rheology study using Bingham and Power law models showed that the synergy of MES and nanopolystyrene improved the formulated drilling fluid. Filtration study under LPLT and HPHT conditions showed that MES and nanopolystyrene drilling fluid reduced filtration loss by 50.7% at LPLT and 61.1% at HPHT conditions. These filtration data were validated by filter cake permeability and scanning electron microscope images.
  4. Zainal-Abidin RA, Zainal Z, Mohamed-Hussein ZA, Sew YS, Simoh S, Ab Razak S, et al.
    Data Brief, 2020 Aug;31:105806.
    PMID: 32566707 DOI: 10.1016/j.dib.2020.105806
    The genomics and genetic data of pigmented and non-pigmented Malaysian rice varieties are still limited. Hence, we performed the genome resequencing of two black rice varieties (Bali, Pulut Hitam 9), two red rice varieties (MRM16, MRQ100) and two white rice varieties (MR297 and MRQ76) using Illumina HiSeq 4000 platform with 30x sequencing coverage. We aimed to identify and annotate single nucleotide polymorphisms (SNPs) from the genome of these four pigmented and two non-pigmented rice varieties. The potential SNPs will be used in developing the functional SNP markers related to nutritional (i.e. antioxidant, folate, amylose) and quality (i.e. aromatic) traits. Raw data of the pigmented and non-pigmented rice varieties have been deposited into the European Nucleotide Archive (ENA) database with accession number PRJEB29070 and PRJEB32344, respectively.
  5. Ahmad F, Hasan N, Hisham SN, Yusof SN, Hassan AA, Hussein S, et al.
    Data Brief, 2023 Feb;46:108815.
    PMID: 36582993 DOI: 10.1016/j.dib.2022.108815
    The genomics and genetic information of Malaysian rice (Oryza sativa L.) and their mutant lines are very limited. Therefore, the genome resequencing of two drought and submergence tolerant mutant rice lines, NMR152 and NMR151 and their parental line, MR219 was performed using Illumina Hi Seq 4000 platform with 20x sequencing coverage to facilitate the identification of causal mutations and the discovery of candidate variants of single nucleotide polymorphisms (SNPs) from their genome. The identification of SNPs would be useful in developing functional SNP markers related to drought and submergences resistance traits. Genome sequence data (FASTQ format) of the mutants and their parental line have been deposited into the National Center for Biotechnology Information (NCBI) database under sequence read archive (SRA) data with accessions SRR20824202 (NMR152), SRR20995190 (NMR151) and SRR21043964 (MR219), respectively.
  6. Wan Mansor WN, Abdullah S, Che Wan Othman CWMN, Jarkoni MNK, Chao HR, Lin SL
    Data Brief, 2020 Jun;30:105440.
    PMID: 32300616 DOI: 10.1016/j.dib.2020.105440
    Energy has a significant influence on Malaysia's industry. It is used in electricity generation, refineries, gas processing plants and end-user applications such as transportation, residential, agriculture and fishing. These burning fossil fuel activities produce greenhouse gases (GHG) emissions. This article presents the emissions data of fuel used in power plants in Malaysia during the year of 1990 until 2017. The fuel used in power plants is coal and coke, natural gas, diesel oil and residual fuel oil. The energy data used in power plants were gathered from the Malaysia Energy Information Hub, published by the Malaysian Energy Commission. The GHG emissions data were calculated using the emission factors method. The climate impact of different GHGs in terms of CO2-equivalent (CO2-e) was also calculated using global warming potentials. The article also presents population data in Malaysia during the year. A correlation between the fuels, GHG emission and the population is also investigated using statistical analysis. The data presented here may facilitate the Malaysian government to identify the source of the pollutants and undertake a climate change mitigation plan.
  7. Yusup Y, Kayode JS, Alkarkhi AFM
    Data Brief, 2018 Dec;21:13-17.
    PMID: 30310834 DOI: 10.1016/j.dib.2018.09.108
    Data on the micrometeorological parameters and Energy Fluxes at an intertidal zone of a Tropical Coastal Ocean was carried out on an installed eddy covariance instruments at a Muka head station in the north-western end of the Pinang Island (5°28'06''N, 100°12'01''E), Peninsula Malaysia. The vast source of the supply of energy and heat to the hydrologic and earth׳s energy cycles principally come from the oceans. The exchange of energies via air-sea interactions is crucial to the understanding of climate variability, energy, and water budget. The turbulent energy fluxes are primary mechanisms through which the ocean releases the heat absorbed from the solar radiations to the environment. The eddy covariance (EC) system is the direct technique of measuring the micrometeorological parameters which allow the measurement of these turbulent fluxes in the time scale of half-hourly basis at 20 Hz over a long period. The data being presented is the comparison of the two-year seasonality patterns of monsoons variability on the measured microclimate variables in the southern South China Sea coastal area.
  8. Dzulkefli NA, Zainol N
    Data Brief, 2018 Oct;20:1710-1720.
    PMID: 30263925 DOI: 10.1016/j.dib.2018.09.008
    In this article, five variables including type of substrates, sizes of substrates, mass ratio of spawn to substrates (SP/SS), temperature and pretreatment of substrates were used to model mycelium growth in Pleurotus sp. (oyster mushroom) cultivation by using agricultural wastes via two level factorial analysis. Two different substrates which were empty fruit bunch (EFB) and sugarcane bagasse (SB) were used. Analysis of Variance (ANOVA) for both mycelium extension rate (M) and nitrogen concentration in mycelium (N) showed that the confidence level was greater than 95% while p-value of both models were less than 0.05 which is significant. The coefficient of determination (R2) for both M and N were 0.8829 and 0.9819 respectively. From the experiment, the best condition to achieve maximum M (0.8 cm/day) and N (656 mg/L) was by using substrate B, 2.5 cm size of substrate, 1:14 for SP/SS, incubated at ambient temperature and application of steam treatment. The data showed that EFB can be used to replace sawdust as a media for the oyster mushroom cultivation. Data analysis was performed using Design Expert version 7.0.
  9. Xin TJ, Shaari H, Ghazali A, Ibrahim NB, Rine KS
    Data Brief, 2020 Jun;30:105527.
    PMID: 32322639 DOI: 10.1016/j.dib.2020.105527
    The groundwater samples of Pulau Bidong, Terengganu, Malaysia were collected from five sampling stations from June to October 2016. Physical parameters such as temperature, specific conductivity, dissolved oxygen (DO), pH, salinity, and DO saturation were measured in-situ by using handheld device. Meanwhile, total suspended solid (TSS), total dissolved solid (TDS), nitrate (NO3 -), nitrite (NO2 -), ammonium (NH4 +) and phosphate (PO4 3-) were analysed and detected using UV-Vis Spectrophotometer. The inorganic nutrients (NO3 -, NO2 -, NH4 + and PO4 3-) were ranged from 0.000 to 4.310 mg/L, 0.000 to 0.190 mg/L, 0.000 to 0.807 mg/L and 0.003 to 0.028 mg/L, respectively. The monthly trends of specific conductivity, DO, salinity, DO saturation, NO3 -, NO2 - and NH4 + demonstrated significant variation in June (the lowest rainfall) compared to other months. Correlation matrix revealed that temperature was associated with the specific conductivity, and NH4 + strongly correlated with DO, NO3 - and NO2 -. Nevertheless, there is a strong negative correlation between physicochemical parameters and monthly rainfall distribution. Notably, future studies are required for long-term monitoring to ensure the good quality of groundwater from Pulau Bidong. The spatial and temporal variability of the present data has been reported by Tan et al. [1].
  10. Paul SC
    Data Brief, 2017 Dec;15:987-992.
    PMID: 29159238 DOI: 10.1016/j.dib.2017.11.012
    This data presented herein are the research summary of "mechanical behavior and durability performance of concrete containing recycled concrete aggregate" (Paul, 2011) [1]. The results reported in this article relate to an important parameter of optimum content of recycle concrete aggregate (RCA) in production of new concrete for both structural and non-structural applications. For the purpose of the research various types of physical, mechanical and durability tests are performed for concrete made with different percentages of RCA. Therefore, this data set can be a great help of the readers to understand the mechanism of RCA in relates to the concrete properties.
  11. Osman BE, Khalik WMAWM
    Data Brief, 2018 Oct;20:999-1003.
    PMID: 30225314 DOI: 10.1016/j.dib.2018.08.178
    The main goal of this research work is to measure the concentration levels of organochlorine residue in soil. The potential health risk of this pollutant on human was also determined. 10 samples were taken from a lowland paddy field situated in Kelantan, Malaysia. Physical parameters namely soil pH, organic carbon content, water content and particle size were identified to evaluate the quality of soil from the agriculture site. Soxhlet extraction and florisil clean-up process were applied to isolate 10 targeted organochlorine compounds prior to the final determination using a gas chromatography-electron capture detector. Soil from the lowland has characteristics such as slightly acidic, low organic carbon content, high water content and texture dominated by the sandy type. Concentration levels of six detected organochlorine pesticides were calculated in µg/kg. Hazard quotient value in all samples was less than the acceptable risk level HQ ≤ 1, thus reflecting the status of soil in the subjected area as unlikely to pose any adverse health effects.
  12. Amelia TSM, Amirul AA, Bhubalan K
    Data Brief, 2018 Feb;16:75-80.
    PMID: 29188224 DOI: 10.1016/j.dib.2017.11.011
    We report data associated with the identification of three polyhydroxyalkanoate synthase genes (phaC) isolated from the marine bacteria metagenome of Aaptos aaptos marine sponge in the waters of Bidong Island, Terengganu, Malaysia. Our data describe the extraction of bacterial metagenome from sponge tissue, measurement of purity and concentration of extracted metagenome, polymerase chain reaction (PCR)-mediated amplification using degenerate primers targeting Class I and II phaC genes, sequencing at First BASE Laboratories Sdn Bhd, and phylogenetic analysis of identified and known phaC genes. The partial nucleotide sequences were aligned, refined, compared with the Basic Local Alignment Search Tool (BLAST) databases, and released online in GenBank. The data include the identified partial putative phaC and their GenBank accession numbers, which are Rhodocista sp. phaC (MF457754), Pseudomonas sp. phaC (MF437016), and an uncultured bacterium AR5-9d_16 phaC (MF457753).
  13. Sohaimi ES, Md Amin R, Sahibu A, Mohd Akhir MF
    Data Brief, 2021 Apr;35:106893.
    PMID: 33718548 DOI: 10.1016/j.dib.2021.106893
    In this article, the abundance of phytoplankton community structure in Malacca Straits (MS); from Port Klang to Langkawi Island are reported. The datasets include data from 25 selected sampling sites that were acquired in August 2019 on board the RV Discovery's cruise expedition. These data contain details on the density of phytoplankton (cell L-1), total number of species, volume seawater filtered (in L) and the concentration factors (ml) in MS. Data presented in this article consists of 163 species, including unidentified species from 6 phyla of phytoplankton, along with the percentage of a major community group in MS.
  14. Syafaat MN, Muhammad T, Abol-Munafi AB, Ikhwanuddin M
    Data Brief, 2019 Oct;26:104438.
    PMID: 31528675 DOI: 10.1016/j.dib.2019.104438
    Population density, growth, survival, water quality and larval stage index of purple mud crab, Scylla tranquebarica at different feeding regimes and the data on ingestion rate of chosen microalgae, survival and larval development of blue swimming crab, Portunus pelagicus are presented. A twenty days of S. tranquebarica larval culture from zoeal 1 until megalopa stage under two different feeding regimes of A) Rotifer, Artemia nauplii and shrimp meat and B) Rotifer, Artemia nauplii and artificial feed is shared. A method on investigation of individual larvae of P. pelagicus capability to catch four different types of microalgae within 24 h is also shared. Direct eye observation, data collected through the larval rearing culture of S. tranquebarica and further statistical analysis were done daily until the crabs reached the megalopa stage. The result obtained from the optimum density of selected microalgae fed by individual larvae of P. pelagicus will be combined with the highest survival rate and larval stage index to develop feeding schedule for crab larvae P. pelagicus. This dataset has not previously been published and is of great potential for further comparison with other - and future investigation of various feeding regimes affected the crab culture. The collected information could be used as a standard feeding regime for nursery and hatchery seed production of others portunids crabs. The data described in this article are available as a supplementary file to this article.
  15. Idris MS, Lee Siang H, Amin RM
    Data Brief, 2020 Feb;28:104982.
    PMID: 31890817 DOI: 10.1016/j.dib.2019.104982
    The biophysical data presented in this article were collected in the east coast of Peninsular Malaysia from May to November 2009. These monthly surface data were obtained from 32 stations along the coastal-offshore transect and were analyzed to understand the spatial and temporal distributions of biophysical parameters during different monsoon seasons. The data presented here include sea surface temperature (SST), sea surface salinity (SSS), Secchi disk depth (SDD), Chlorophyll-a (Chl-a), suspended particulate matter (SPM), mineral suspended solid (MSS) and chromophoric dissolved organic matter (CDOM).
  16. Arina N, Ashikin CN, Hidayah N, Fairoz M, Rozaimi M
    Data Brief, 2020 Feb;28:104979.
    PMID: 31909102 DOI: 10.1016/j.dib.2019.104979
    This paper presents data on nitrogen characteristics in a tropical seagrass meadow located in Sungai Pulai estuary (Johor, Malaysia) and is related to the article "Nitrogen dynamics in tropical seagrass meadows under heavy anthropogenic influence" [1]. Field sampling conducted from August 2015 to May 2016 aimed to collect sediments and seagrass tissues for analysis of nitrogen elemental content and stable isotope values. Sediment samples and seagrass tissue (above-ground and below-ground parts) were collected by using PVC cores. The information is presented as unprocessed and partially data, which incorporates nitrogen content (in %) and δ15N values (‰) of sediment and seagrass tissue samples. Nitrogen loadings in the seagrass sediments, as based on down-core data of sediment samples up to 30 cm depths, should be read with [1] to comprehend the baseline nitrogen dynamics of the study area.
  17. Engku Kamarudin EM, Wan Sulaiman WS, Sarnon NH, Amin AS
    Data Brief, 2020 Jun;30:105586.
    PMID: 32346583 DOI: 10.1016/j.dib.2020.105586
    The readiness to change among drug addicts is a key strength for successful treatment. Self-awareness, self-determination, and self-efficacy have been identified as the fundamentals of readiness that should be embraced by drug addicts while in treatment. In this article, the shared data were applied to assess the effect of individual psycho-educational intervention based on integrated self-awareness and self-determination theories (i-SEAZ) on self-efficacy amongst opioid-dependent patients undergoing methadone treatment (MT). The effectiveness of the i-SEAZ module was evaluated in a total of 75 opioid-dependent MT participants from five Methadone Clinics under the Ministry of Health, Malaysia located across Klang Valley. The experimental group consisted of 38 participants who received 10 sessions of individual i-SEAZ alongside MT, whereas 37 participants of the control group only received MT. The shared data were collected through three questionnaires, namely Scale for Self-Consciousness Assessment (SSCA), Treatment Motivation Questionnaire (TMQ), and General Self Efficacy (GSE). Data collection was performed twice; the first instance was two weeks prior to initiation of i-SEAZ (pretest), and the second was two weeks post completion of i-SEAZ (posttest). The extracted data were precisely represented in terms of means and standard deviations (SDs).
  18. Mohd Izham NZ, Yusoff HM, Ul Haq Bhat I, Endo T, Fukumura H, Kwon E, et al.
    Data Brief, 2020 Jun;30:105568.
    PMID: 32368595 DOI: 10.1016/j.dib.2020.105568
    The structural investigation of synthesized compounds can be carried out by various spectroscopic techniques. It is an important prospect in order to elucidate the structure of the desired products before being further utilized. The preparation of new p-nitro stilbene Schiff base derivatives as an electrochemical DNA potential spacer was synthesized using (E)-4-(4-nitrostyryl)aniline from Heck reaction with aldehydes in ethanolic solution. The data presented here in this article contains FTIR, UV-Vis and 1H and 13C NMR of (E)-4-(4-nitrostyryl)aniline and nitrostyryl aniline derivatives.
  19. Koe WL
    Data Brief, 2020 Dec;33:106423.
    PMID: 33102642 DOI: 10.1016/j.dib.2020.106423
    The data presented were used to examine the level of technopreneurial intention and differences in intention between male and female university students. A total of 361 final-year students from a public university in Malaysia have participated in the data collection process through answering online questionnaire. The respondents were selected by using proportionate stratified sampling. Quantitative method was employed in data analysis process. Specifically, the software of IBM SPSS was used to perform descriptive analysis and independent sample t-test. Data have also been tested for internal consistency to ensure their reliability. Mean and standard deviation values for male and female student's technopreneurial intention were presented. In comparison, the data demonstrated that no difference existed between male and female student's technopreneurial intention. The data provided new information on university student's level of technopreneurial intention. It was useful for higher learning institutions and governmental agencies in designing technopreneurship development programs, particularly in the era of post-COVID19 pandemic which requires extensive use of technology in entrepreneurship.
  20. Lee MK, Millns P, Mbaki Y, Ng ST, Tan CS, Lim KH, et al.
    Data Brief, 2018 Jun;18:1322-1326.
    PMID: 29900310 DOI: 10.1016/j.dib.2018.04.033
    The data in this article contain supporting evidence for the research manuscript entitled "Bronchodilator effects of Lignosus rhinocerotis extract on rat isolated airways is linked to the blockage of calcium entry" by Lee et al. (2018) [1]. The data were obtained by calcium imaging technique with fluorescent calcium indicator dyes, Fura 2-AM, to visualize calcium ion movement in the rat dorsal ganglion (DRG) cells. The effects of L. rhinocerotis cold water extract (CWE1) on intracellular calcium levels in the DRG cells were presented.
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