Affiliations 

  • 1 Department of Biological Sciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
  • 2 Faculty of Applied Sciences, Universiti Teknologi MARA, Cawangan Negeri Sembilan Kampus Kuala Pilah, 72000 Kuala Pilah, Negeri Sembilan, Malaysia
  • 3 Agrotechnology and Biosciences Division, Malaysian Nuclear Agency, Bangi, 43000, Kajang, Selangor, Malaysia
Data Brief, 2023 Feb;46:108815.
PMID: 36582993 DOI: 10.1016/j.dib.2022.108815

Abstract

The genomics and genetic information of Malaysian rice (Oryza sativa L.) and their mutant lines are very limited. Therefore, the genome resequencing of two drought and submergence tolerant mutant rice lines, NMR152 and NMR151 and their parental line, MR219 was performed using Illumina Hi Seq 4000 platform with 20x sequencing coverage to facilitate the identification of causal mutations and the discovery of candidate variants of single nucleotide polymorphisms (SNPs) from their genome. The identification of SNPs would be useful in developing functional SNP markers related to drought and submergences resistance traits. Genome sequence data (FASTQ format) of the mutants and their parental line have been deposited into the National Center for Biotechnology Information (NCBI) database under sequence read archive (SRA) data with accessions SRR20824202 (NMR152), SRR20995190 (NMR151) and SRR21043964 (MR219), respectively.

* Title and MeSH Headings from MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.