Displaying all 14 publications

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  1. Arafath MA, Kwong HC, Adam F
    Acta Crystallogr E Crystallogr Commun, 2019 May 01;75(Pt 5):571-575.
    PMID: 31110788 DOI: 10.1107/S2056989019004444
    In the title compound, C10H13N3OS, the azomethine C=N double bond has an E configuration. The phenyl ring and methyl-hydrazine carbo-thio-amide moiety [maximum deviation = 0.008 (2) Å] are twisted slightly with a dihedral angle of 14.88 (10)°. In the crystal, mol-ecules are linked into sheets parallel to the ab plane via N-H⋯S hydrogen bonds and C-H⋯π inter-actions.
  2. Arafath MA, Kwong HC, Adam F
    Acta Crystallogr E Crystallogr Commun, 2019 Jul 01;75(Pt 7):1065-1068.
    PMID: 31392026 DOI: 10.1107/S2056989019008946
    The asymmetric unit of the title compound, C15H21N3OS, comprises of two crystallographically independent mol-ecules (A and B). Each mol-ecule consists of a cyclo-hexane ring and a 2-hy-droxy-3-methyl-benzyl-idene ring bridged by a hydrazinecarbo-thio-amine unit. Both mol-ecules exhibit an E configuration with respect to the azomethine C=N bond. There is an intra-molecular O-H⋯N hydrogen bond in each mol-ecule forming an S(6) ring motif. The cyclo-hexane ring in each mol-ecule has a chair conformation. The benzene ring is inclined to the mean plane of the cyclo-hexane ring by 47.75 (9)° in mol-ecule A and 66.99 (9)° in mol-ecule B. The mean plane of the cyclo-hexane ring is inclined to the mean plane of the thio-urea moiety [N-C(=S)-N] by 55.69 (9) and 58.50 (8)° in mol-ecules A and B, respectively. In the crystal, the A and B mol-ecules are linked by N-H⋯S hydrogen bonds, forming 'dimers'. The A mol-ecules are further linked by a C-H⋯π inter-action, hence linking the A-B units to form ribbons propagating along the b-axis direction. The conformation of a number of related cyclo-hexa-nehydrazinecarbo-thio-amides are compared to that of the title compound.
  3. Arafath MA, Kwong HC, Adam F
    Acta Crystallogr E Crystallogr Commun, 2019 Oct 01;75(Pt 10):1486-1489.
    PMID: 31636980 DOI: 10.1107/S2056989019012623
    The PtII atom in the title complex, [Pt(C15H18N4O4S)(C2H6OS)], exists within a square-planar NS2O donor set provided by the N, S, O atoms of the di-anionic tridentate thio-semicarbazo ligand and a dimethyl sulfoxide S atom. The two chelate rings are coplanar, subtending a dihedral angle of 1.51 (7)°. The maximum deviation from an ideal square-planar geometry is seen in the five-membered chelate ring with an S-Pt-S bite angle of 96.45 (2)°. In the crystal, mol-ecules are linked via N-H⋯O, C-H⋯O, C-H⋯N and C-H⋯π inter-actions into two-dimensional networks lying parallel to the ab plane. The conformations of related cyclo-hexyl-hydrazine-1-carbo-thio-amide ligands are compared to that of the title compound.
  4. Adam F, Arafath MA, Haque RA, Razali MR
    Acta Crystallogr E Crystallogr Commun, 2015 Nov 1;71(Pt 11):o819.
    PMID: 26594544 DOI: 10.1107/S2056989015018113
    The mol-ecule of the title Schiff base compound, C14H14N2O2, displays an E conformation with respect the imine C=N double bond. The mol-ecule is approximately planar, with the dihedral angle formed by the planes of the pyridine and benzene rings being 5.72 (6)°. There is an intra-molecular hydrogen bond involving the phenolic H and imine N atoms.
  5. Adam F, Arafath MA, Rosenani AH, Razali MR
    Acta Crystallogr E Crystallogr Commun, 2015 Dec 1;71(Pt 12):o971-2.
    PMID: 26870556 DOI: 10.1107/S2056989015021180
    In the mol-ecule of the title compound, C21H17N3O2, the 5,6-di-hydro-benzimidazo[1,2-c]quinazoline moiety is disordered over two orientations about a pseudo-mirror plane, with a refined occupancy ratio of 0.863 (2):0.137 (2). The dihedral angles formed by the benzimidazole ring system and the benzene ring of the quinazoline group are 14.28 (5) and 4.7 (3)° for the major and minor disorder components, respectively. An intra-molecular O-H⋯O hydrogen bond is present. In the crystal, mol-ecules are linked by O-H⋯N hydrogen bonds, forming chains running parallel to [10-1].
  6. Arafath MA, Kwong HC, Adam F, Razali MR
    Acta Crystallogr E Crystallogr Commun, 2018 May 01;74(Pt 5):687-690.
    PMID: 29850092 DOI: 10.1107/S2056989018005959
    The title compound, C28H24N2O3, is a flexible Schiff base, having a dihedral angle of 59.53 (5)° between the mean planes of two phenyl rings bounded in the centre by a single O atom. The dihedral angles between the mean planes of the phenyl rings bonded to the central O atom and the mean planes of the terminal methyl-phenol rings are 31.47 (6) and 36.03 (5)°, respectively. The sp2-hybridized character of the azanylylidene groups is confirmed by their bond lengths and bond angles. In the crystal, mol-ecules are linked into centrosymmetric dimers by weak C-H⋯N inter-actions and connected into dimeric chains through weak C-H⋯O inter-actions. These chains are inter-connected into a two-dimensional network parallel to (1[Formula: see text]1) via weak C-H⋯π inter-actions.
  7. Arafath MA, Kwong HC, Adam F, Razali MR
    Acta Crystallogr E Crystallogr Commun, 2018 Oct 01;74(Pt 10):1460-1462.
    PMID: 30319801 DOI: 10.1107/S2056989018013129
    In the title compound, C18H27N3OS, the cyclo-hexane ring has a chair conformation. The azomethine C=N double bond has an E configuration. The nearly planar hydrazinecarbo-thio-amide moiety and substituted benzene ring are twisted by 31.13 (5)° relative to each other. The amide moiety and the cyclo-hexane ring are almost perpendicular to each other; a similar conformation was previously observed in reported structures. In the crystal, mol-ecules are linked by N-H⋯S hydrogen bonds, forming inversion dimers with an R 2 2(8) ring motif.
  8. Chia TS, Kwong HC, Wong QA, Quah CK, Arafath MA
    Acta Crystallogr E Crystallogr Commun, 2019 Jan 01;75(Pt 1):8-11.
    PMID: 30713724 DOI: 10.1107/S2056989018016900
    A new polymorphic form of the title compound, C8H8O3, is described in the centrosymmetric monoclinic space group P21/c with Z' = 1 as compared to the first polymorph, which crystallizes with two conformers (Z' = 2) in the asymmetric unit in the same space group. In the crystal of the second polymorph, inversion dimers linked by O-H⋯O hydrogen bonds occur and these are linked into zigzag chains, propagating along the b-axis direction by C-H⋯O links. The crystal structure also features a weak π-π inter-action, with a centroid-to-centroid distance of 3.8018 (6) Å. The second polymorph of the title compound is less stable than the reported first polymorph, as indicated by its smaller calculated lattice energy.
  9. Wong QA, Chia TS, Kwong HC, Chidan Kumar CS, Quah CK, Arafath MA
    Acta Crystallogr E Crystallogr Commun, 2019 Jan 01;75(Pt 1):53-57.
    PMID: 30713733 DOI: 10.1107/S2056989018017450
    The mol-ecular structure of the title chalcone derivative, C15H10FNO3, is nearly planar and the mol-ecule adopts a trans configuration with respect to the C=C double bond. The nitro group is nearly coplanar with the attached benzene ring, which is nearly parallel to the second benzene ring. In the crystal, mol-ecules are connected by pairs of weak inter-molecular C-H⋯O hydrogen bonds into inversion dimers. The dimers are further linked by another C-H⋯O hydrogen bond and a C-H⋯F hydrogen bond into sheets parallel to (104). π-π inter-actions occur between the sheets, with a centroid-centroid distance of 3.8860 (11) Å. Hirshfeld surface analysis was used to investigate and qu-antify the inter-molecular inter-actions.
  10. Kwong HC, Mahmud Pathi I, Chidan Kumar CS, Quah CK, Arafath MA
    Acta Crystallogr E Crystallogr Commun, 2018 Jul 01;74(Pt 7):1030-1034.
    PMID: 30002910 DOI: 10.1107/S2056989018009131
    In the cation of the title salt, C17H23N2O+·Br-, the adamantyl moiety and the pyridiniminium ring are inclined to the ketone bridge by torsion angles of -78.1 (2) (C-C-C=O) and 58.3 (2)° (C-C-N-C), respectively, and the ketone bridge has a C-C-C-N torsion angle of 174.80 (15)°. In the crystal, the cations are connected into chains parallel to the c axis by C-H⋯O hydrogen bonds. The chains are further linked into layers parallel to the bc plane by N-H⋯Br and C-H⋯Br hydrogen bonds, C-H⋯π inter-actions and π-π stacking inter-actions [centroid-to-centroid distance = 3.5657 (11) Å]. A Hirshfeld surface analysis, which comprises the dnorm surface, electrostatic potential map and two-dimensional fingerprint plots, was carried out to verify the contribution of the various inter-molecular inter-actions.
  11. Alam MM, Ahmed MF, Arafath MA, Karim MR, Uddin MN, Hossain MS
    Heliyon, 2024 Jun 30;10(12):e33440.
    PMID: 39015804 DOI: 10.1016/j.heliyon.2024.e33440
    The coordination polymers (CPs) of Cu and Zr were synthesized by the hydrothermal method. The orotic acid potassium salt (H3KL) was used as a linker, which coordinates via O-O. Whereas, 4,4'-trimethylenedipyridine (4,4'-TMDP) was used as a bifunctional monomer, which coordinates via N-N. The synthesized CPs were characterized by FTIR, P-XRD, TGA, DSC and SEM. The photocatalytic activity was investigated against methylene blue (MB) under sunlight irradiation. Both Cu-CP and Zr-CP exhibited potential activity for the degradation of MB, which was 72 % for Cu-CP and 93 % for Zr-CP. The band gap of the CPs was also investigated, and the observed value was 2.2 eV. The band gap indicates that these compounds could bring breakthroughs as photocatalysts instead of semiconductors. These kinds of CPs could be used for multiple purposes in industry and in a green environment.
  12. Arafath MA, Kwong HC, Adam F, Mohiuddin M, Sarker MS, Salim M, et al.
    Acta Crystallogr E Crystallogr Commun, 2020 Jan 01;76(Pt 1):91-94.
    PMID: 31921459 DOI: 10.1107/S2056989019016852
    The mol-ecule of the title compound, C28H22N4O9, exhibits crystallographically imposed twofold rotational symmetry, with a dihedral angle of 66.0 (2)° between the planes of the two central benzene rings bounded to the central oxygen atom. The dihedral angle between the planes of the central benzene ring and the terminal phenol ring is 4.9 (2)°. Each half of the mol-ecule exhibits an imine E configuration. An intra-molecular O-H⋯N hydrogen bond is present. In the crystal, the mol-ecules are linked into layers parallel to the ab plane via C-H⋯O hydrogen bonds. The crystal studied was refined as a two-component pseudomerohedral twin.
  13. Arafath MA, Al-Suede FSR, Adam F, Al-Juaid S, Khadeer Ahamed MB, Majid AMSA
    Drug Dev Res, 2019 09;80(6):778-790.
    PMID: 31215682 DOI: 10.1002/ddr.21559
    The bidentate N-cyclohexyl-2-(3-hydroxy-4-methoxybenzylidene)hydrazine-1-carbothioamide Schiff base ligand (HL) was coordinated to divalent nickel, palladium and platinum ions to form square planar complexes. The nickel and palladium complexes, [NiL2 ], [PdL2 ] form square planar complexes with 2:1 ligand to metal ratio. The platinum complex, [PtL(dmso)Cl] formed a square planar complex with 1:1 ligand to metal ratio. Platinum undergoes in situ reaction with DMSO before complexing with the ligand in solution. The cytotoxicity of HL, [NiL2 ], [PdL2 ], and [PtL(dmso)Cl] were evaluated against human colon cancer cell line (HCT-116), human cervical cancer (Hela) cell line, melanoma (B16F10) cells, and human normal endothelial cell lines (Eahy926) by MTT assay. The [NiL2 ] complex displayed selective cytotoxic effect against the HCT 116 cancer cell line with IC50 of 7.9 ± 0.2 μM. However, HL, [PdL2 ], and [PtL(dmso)Cl] only exhibited moderate cytotoxic activity with IC50 = 75.9 ± 2.4, 100.0 ± 1.8, and 101.0 ± 3.6 μM, respectively. The potent cytotoxicity of [NiL2 ] was characterized using Hoechst and Rhodamine assays. The nickel complex, [NiL2 ], caused remarkable nuclear condensation and reduction in mitochondrial membrane potential. In addition, molecular docking studies confirms that [NiL2 ] possesses significant binding efficiency with Tyrosine kinase. Altogether, the results revealed that [NiL2 ] exhibits cytotoxicity against the cancer cells via Tyrosine kinase-induced proapoptosis pathway. This study demonstrates that the [NiL2 ] complex could be a promising therapeutic agent against colorectal carcinoma.
  14. Chia TS, Kwong HC, Sim AJ, Ng WZ, Wong QA, Chidan Kumar CS, et al.
    Acta Crystallogr E Crystallogr Commun, 2019 Jan 01;75(Pt 1):49-52.
    PMID: 30713732 DOI: 10.1107/S2056989018017425
    In this study, a new monoclinic polymorph (space group C2/c) of 2,2'-methyl-enebis(isoindoline-1,3-dione), C17H10N2O4, is reported and compared to the previously reported triclinic polymorph (space group P ). Similarly, both polymorphs consist of a unique mol-ecule in the asymmetric unit (Z' = 1). The mol-ecular conformations of the two polymorphs are very similar, as shown by the r.m.s. deviation of 0.368 Å (excluding all H atoms). The inter-molecular inter-actions of both polymorphs are described along with the Hirshfeld surface analysis, and the lattice energies are calculated.
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