A resistant variety with high yielding potential is key for increasing crop production to
fulfill the food requirement of the ever increasing world populations. Consequently, the aim of plant
breeders is to develop high yielding varieties or cultivars that are resistant or tolerant to specific
diseases or insects. For developing a resistant variety, it is enormously indispensable to incorporate or
introgress the specific resistant genes of that particular disease into the recipient. Suppression
subtractive hybridization (SSH) is a powerful technique for the identification of disease specific
differentially expressed genes that are expressed in a resistant or susceptible variety. This paper
presents a brief review on the SSH technique with examples focusing on the identification of the
wheat disease specific differentially expressed genes and their defense mechanisms against fungal
pathogens in global wheat cultivars. This review is helpful for wheat researchers for the updated
information on the SSH technique for the identification of differentially expressed genes in the global
wheat cultivars and varieties. Eventually, the identified genes could be used to develop the disease
resistance variety through marker-assisted backcrossing programme or conventional breeding.