Displaying publications 1 - 20 of 34 in total

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  1. Zainodin bin Haji Jubok
    In this paper a class of capital investment problem is considered within the context of mathematical programming. The usual and commonly used approach is presented upon the basis of the next present value criterion, and a branch and bound method is discussed for a model under extended assumptions.
    Dalam kertas ini satu kelas masalah pelaburan kapital difikirkan di dalam konteks pengaturcaraan matematik. Pendekatan biasa dan selalu digunakan, dikemukakan berasaskan kriterium Nilai Semasa Berikut dan satu kaedah bercabang dan terbatas dibincangkan untuk satu model di bawah anggapan yang diperluaskan.
    Matched MeSH terms: Biophysical Phenomena
  2. Razidah Ismail
    Scientific Research Journal, 2006;3(1):37-52.
    MyJurnal
    The state space modeling approach was developed to cope with the demand
    and performance due to the increase in system complexity, which may have
    multiple inputs and multiple outputs (MIMO). This approach is based on timedomain
    analysis and synthesis using state variables. This paper describes the
    development of a state space representation of a furnace system of a combined
    cycle power plant. Power plants will need to operate optimally so as to stay
    competitive, as even a small improvement in energy efficiency would involve
    substantial cost savings. Both the quantitative and qualitative analyses of the
    state space representation of the furnace system are discussed. These include
    the responses of systems excited by certain inputs and the structural properties
    of the system. The analysis on the furnace system showed that the system is
    bounded input and bounded output stable, controllable and observable. In
    practice, the state space formulation is very important for numerical computation
    and controller design, and can be extended for time-varying systems.
    Matched MeSH terms: Biophysical Phenomena
  3. Habshah Midi, Bagheri A, Rahmatullah Imon A
    Sains Malaysiana, 2011;40:1437-1447.
    Outliers in the X-direction or high leverage points are the latest known source of multicollinearity. Multicollinearity is a nonorthogonality of two or more explanatory variables in multiple regression models, which may have important influential impacts on interpreting a fitted regression model. In this paper, we performed Monte Carlo simulation studies to achieve two main objectives. The first objective was to study the effect of certain magnitude and percentage of high leverage points, which are two important issues in tending the high leverage points to be collinearity-enhancing observations, on the multicollinarity pattern of the data. The second objective was to investigate in which situations these points do make different degrees of multicollinearity, such as moderate or severe. According to the simulation results, high leverage points should be in large magnitude for at least two explanatory variables to guarantee that they are the cause of multicollinearity problems. We also proposed some practical Lower Bound (LB) and Upper Bound (UB) for High Leverage Collinearity Influential Measure (HLCIM) which is an essential measure in detecting the degree of multicollinearity. A well-known example is used to confirm the simulation results.
    Matched MeSH terms: Biophysical Phenomena
  4. Nuruzatulifah Bt Asari @ Mansor, Tessonnier JP, Rinaldi A, Reiche S, Kutty M
    Sains Malaysiana, 2012;41:603-609.
    Surface functionalization of multi-walled carbon nanotubes (MWCNTs) was carried out using a gas phase treatment in a Universal Temperature Program (UTP) reactor by flowing SO3 gas onto the CNTs while being heated at different temperatures. The functionalized nanotubes were characterized using X-ray Fluorescence (XRF), Fourier Transform Infrared Spectroscopy (FT-IR) and Raman spectroscopy. The amount of oxyen and sulfur containing groups was determined by acid-base titration. The titration results were in good agreement with elemental analysis using x-ray fluorescence. FTIRanalysis showed the presence of oxygen and sulfur containing groups, S=O, C-S, C=O and -COOH. Raman spectroscopy confirmed that oxygen and sulfur containing acidic groups covalently attached to the sidewall of the MWCNTs.
    Matched MeSH terms: Biophysical Phenomena
  5. Bazikar F, Saraj M
    Sains Malaysiana, 2014;43:1271-1274.
    In the last few years we have seen a very rapid development on solving generalized geometric programming (GGP) problems, but so far less works has been devoted to MOGP due to the inherent difficulty which may arise in solving such problems. Our aim in this paper was to consider the problem of multi-objective geometric programming (MOGP) and solve the problem via two-level relaxed linear programming problem Yuelin et al. (2005) and that is due to simplicity which occurs through linearization i.e. transforming a GP to LP. In this approach each of the objective functions in multi-objective geometric programming is individually linearized using two-level linear relaxed bound method, which provides a lower bound for the optimal values. Finally our MOGP is transformed to a multi-objective linear programming problem (moLP) which is solved by reference point approach. In the end, a numerical example is given to investigate the feasibility and effectiveness of the proposed approach.
    Matched MeSH terms: Biophysical Phenomena
  6. Lim TH
    Sains Malaysiana, 2014;43:1259-1262.
    A third order Nakashima type implicit Pseudo Runge-Kutta method is presented. The free parameter was determined by minimizing the error bound. The stability region of the method was presented. Some problems on delay differential equations are tested to compare the accuracy of the proposed method with third order RADAU I.
    Matched MeSH terms: Biophysical Phenomena
  7. Khachatryan V, Sirunyan AM, Tumasyan A, Adam W, Bergauer T, Dragicevic M, et al.
    Phys Rev Lett, 2015 Feb 6;114(5):051801.
    PMID: 25699433
    A study of vector boson scattering in pp collisions at a center-of-mass energy of 8 TeV is presented. The data sample corresponds to an integrated luminosity of 19.4  fb(-1) collected with the CMS detector. Candidate events are selected with exactly two leptons of the same charge, two jets with large rapidity separation and high dijet mass, and moderate missing transverse energy. The signal region is expected to be dominated by electroweak same-sign W-boson pair production. The observation agrees with the standard model prediction. The observed significance is 2.0 standard deviations, where a significance of 3.1 standard deviations is expected based on the standard model. Cross section measurements for W(±)W(±) and WZ processes in the fiducial region are reported. Bounds on the structure of quartic vector-boson interactions are given in the framework of dimension-eight effective field theory operators, as well as limits on the production of doubly charged Higgs bosons.
    Matched MeSH terms: Biophysical Phenomena
  8. Camargo LR, Zukerman-Schpector J, Deobald AM, Braga AL, Tiekink ER
    Acta Crystallogr E Crystallogr Commun, 2015 Mar 1;71(Pt 3):o200-1.
    PMID: 25844248 DOI: 10.1107/S2056989015003242
    Two independent mol-ecules, A and B, comprise the asymmetric unit of the title compound, C20H21N3OSe. While the benzene ring directly bound to the central triazole ring is inclined to the same extent in both mol-ecules [dihedral angles = 40.41 (12) (mol-ecule A) and 44.14 (12)° (B)], greater differences are apparent in the dihedral angles between the Se-bound rings, i.e. 74.28 (12) (mol-ecule A) and 89.91 (11)° (B). Close intra-molecular Se⋯N inter-actions of 2.9311 (18) (mol-ecule A) and 2.9482 (18) Å (B) are noted. In the crystal, supra-molecular chains along the a axis are formed via O-H⋯N hydrogen bonding. These are connected into layers via C-H⋯O and C-H⋯N inter-actions; these stack along (01-1) without directional inter-molecular inter-actions between them.
    Matched MeSH terms: Biophysical Phenomena
  9. Jotani MM, Gajera NN, Patel MC, Sung HH, Tiekink ER
    Acta Crystallogr E Crystallogr Commun, 2015 Oct 1;71(Pt 10):1121-4.
    PMID: 26594387 DOI: 10.1107/S2056989015016023
    The title compound, C17H15N3O2, is a monoclinic polymorph (P21/c with Z' = 1) of the previously reported triclinic (P-1 with Z' = 2) form [Gajera et al. (2013 ▸). Acta Cryst. E69, o736-o737]. The mol-ecule in the monoclinic polymorph features a central pyrazolyl ring with an N-bound p-tolyl group and a C-bound 1,3-benzodioxolyl fused-ring system on either side of the C atom bearing the amino group. The dihedral angles between the central ring and the N- and C-bound rings are 50.06 (5) and 27.27 (5)°, respectively. The angle between the pendent rings is 77.31 (4)°, indicating the mol-ecule has a twisted conformation. The five-membered dioxolyl ring has an envelope conformation with the methyl-ene C atom being the flap. The relative disposition of the amino and dioxolyl substituents is syn. One of the independent mol-ecules in the triclinic form has a similar syn disposition but the other has an anti arrangement of these substituents. In the crystal structure of the monoclinic form, mol-ecules assemble into supra-molecular helical chains via amino-pyrazolyl N-H⋯N hydrogen bonds. These are linked into layers via C-H⋯π inter-actions, and layers stack along the a axis with no specific inter-actions between them.
    Matched MeSH terms: Biophysical Phenomena
  10. Ragheed Hussam, Y., Nurul Bahiyah, A.K.
    MyJurnal
    Neoculin is a sweet protein capable to alter the sour taste into sweet taste, it is 500 times sweeter than the ordinary sugar. This protein has been discovered in Malaysia under the name of Curculin. There are a number of experimental studies that have been conducted on neoculin but none of the studies focuses on molecular level, in order to understand how the protein interacts with the human sweet taste receptors T1R2 and T1R3. Therefore, in this work, a protein-protein docking study was performed between neoculin and the human sweet taste receptor T1R2 and T1R3. The docking results showed residues that might be important for binding the neoculin with the human sweet taste receptors, particularly T1R3 at the amino terminal domain (ATD). In addition, the current results showed that His11, which is important for the taste modifying ability does not bind directly to the human sweet taste receptors.
    Matched MeSH terms: Biophysical Phenomena
  11. Rabha W. Ibrahim, Sayyedah A. Qasem, Zailan Siri
    Sains Malaysiana, 2015;44:295-300.
    This study deals with the presence and distinction of bounded m-solutions (type mild) for a family of generalized integral and differential equations of spot order with fractional resolvent and indefinite delay.
    Matched MeSH terms: Biophysical Phenomena
  12. Ibrahim RW, Ahmad MZ, Al-Janaby HF
    Saudi J Biol Sci, 2016 Jan;23(1):S45-9.
    PMID: 26858564 DOI: 10.1016/j.sjbs.2015.09.012
    A mutation is ultimately essential for adaptive evolution in all populations. It arises all the time, but is mostly fixed by enzymes. Further, most do consider that the evolution mechanism is by a natural assortment of variations in organisms in line for random variations in their DNA, and the suggestions for this are overwhelming. The altering of the construction of a gene, causing a different form that may be communicated to succeeding generations, produced by the modification of single base units in DNA, or the deletion, insertion, or rearrangement of larger units of chromosomes or genes. This altering is called a mutation. In this paper, a mathematical model is introduced to this reality. The model describes the time and space for the evolution. The tool is based on a complex domain for the space. We show that the evolution is distributed with the hypergeometric function. The Boundedness of the evolution is imposed by utilizing the Koebe function.
    Matched MeSH terms: Biophysical Phenomena
  13. Mohamad R, Awang N, Jotani MM, Tiekink ER
    Acta Crystallogr E Crystallogr Commun, 2016 Aug 1;72(Pt 8):1130-7.
    PMID: 27536397 DOI: 10.1107/S2056989016011385
    The crystal and mol-ecular structures of two di-phenyl-tin bis-(di-thio-carbamate)s, [Sn(C6H5)2(C5H10NOS2)2], (I), and [Sn(C6H5)2(C7H14NO2S2)2], (II), are described. In (I), in which the metal atom lies on a twofold rotation axis, the di-thio-carbamate ligand coordinates with approximately equal Sn-S bond lengths and the ipso-C atoms of the Sn-bound phenyl groups occupy cis-positions in the resulting octa-hedral C2S4 donor set. A quite distinct coordination geometry is noted in (II), arising as a result of quite disparate Sn-S bond lengths. Here, the four S-donors define a trapezoidal plane with the ipso-C atoms lying over the weaker of the Sn-S bonds so that the C2S4 donor set defines a skewed trapezoidal bipyramid. The packing of (I) features supra-molecular layers in the ab plane sustained by methyl-ene-C-H⋯π(Sn-ar-yl) inter-actions; these stack along the c-axis direction with no specific inter-actions between them. In (II), supra-molecular chains along the b-axis direction are formed by methyl-ene-C-O(ether) inter-actions; these pack with no directional inter-actions between them. A Hirshfeld surface analysis was conducted on both (I) and (II) and revealed the dominance of H⋯H inter-actions contributing to the respective surfaces, i.e. >60% in each case, and other features consistent with the description of the mol-ecular packing above.
    Matched MeSH terms: Biophysical Phenomena
  14. Wiedenmann J, Bocquillon E, Deacon RS, Hartinger S, Herrmann O, Klapwijk TM, et al.
    Nat Commun, 2016;7:10303.
    PMID: 26792013 DOI: 10.1038/ncomms10303
    The Josephson effect describes the generic appearance of a supercurrent in a weak link between two superconductors. Its exact physical nature deeply influences the properties of the supercurrent. In recent years, considerable efforts have focused on the coupling of superconductors to the surface states of a three-dimensional topological insulator. In such a material, an unconventional induced p-wave superconductivity should occur, with a doublet of topologically protected gapless Andreev bound states, whose energies vary 4π-periodically with the superconducting phase difference across the junction. In this article, we report the observation of an anomalous response to rf irradiation in a Josephson junction made of a HgTe weak link. The response is understood as due to a 4π-periodic contribution to the supercurrent, and its amplitude is compatible with the expected contribution of a gapless Andreev doublet. Our work opens the way to more elaborate experiments to investigate the induced superconductivity in a three-dimensional insulator.
    Matched MeSH terms: Biophysical Phenomena
  15. Zaldi NB, Hussen RSD, Lee SM, Halcovitch NR, Jotani MM, Tiekink ERT
    Acta Crystallogr E Crystallogr Commun, 2017 Jun 01;73(Pt 6):842-848.
    PMID: 28638641 DOI: 10.1107/S2056989017006855
    The title compound, [Sn(CH3)2(C5H8NOS2)2], has the Sn(IV) atom bound by two methyl groups which lie over the weaker Sn-S bonds formed by two asymmetrically chelating di-thio-carbamate ligands so that the coordination geometry is skew-trapezoidal bipyramidal. The most prominent feature of the mol-ecular packing are secondary Sn⋯S inter-actions [Sn⋯S = 3.5654 (7) Å] that lead to centrosymmetric dimers. These are connected into a three-dimensional architecture via methyl-ene-C-H⋯S and methyl-C-H⋯O(morpholino) inter-actions. The Sn⋯S inter-actions are clearly evident in the Hirshfeld surface analysis of the title compound along with a number of other inter-molecular contacts.
    Matched MeSH terms: Biophysical Phenomena
  16. Tan KX, Danquah MK, Sidhu A, Lau SY, Ongkudon CM
    Biotechnol Prog, 2018 01;34(1):249-261.
    PMID: 28699244 DOI: 10.1002/btpr.2524
    Targeted delivery of drug molecules to specific cells in mammalian systems demonstrates a great potential to enhance the efficacy of current pharmaceutical therapies. Conventional strategies for pharmaceutical delivery are often associated with poor therapeutic indices and high systemic cytotoxicity, and this result in poor disease suppression, low surviving rates, and potential contraindication of drug formulation. The emergence of aptamers has elicited new research interests into enhanced targeted drug delivery due to their unique characteristics as targeting elements. Aptamers can be engineered to bind to their cognate cellular targets with high affinity and specificity, and this is important to navigate active drug molecules and deliver sufficient dosage to targeted malignant cells. However, the targeting performance of aptamers can be impacted by several factors including endonuclease-mediated degradation, rapid renal filtration, biochemical complexation, and cell membrane electrostatic repulsion. This has subsequently led to the development of smart aptamer-immobilized biopolymer systems as delivery vehicles for controlled and sustained drug release to specific cells at effective therapeutic dosage and minimal systemic cytotoxicity. This article reports the synthesis and in vitro characterization of a novel multi-layer co-polymeric targeted drug delivery system based on drug-loaded PLGA-Aptamer-PEI (DPAP) formulation with a stage-wise delivery mechanism. A thrombin-specific DNA aptamer was used to develop the DPAP system while Bovine Serum Albumin (BSA) was used as a biopharmaceutical drug in the synthesis process by ultrasonication. Biophysical characterization of the DPAP system showed a spherical shaped particulate formulation with a unimodal particle size distribution of average size ∼0.685 µm and a zeta potential of +0.82 mV. The DPAP formulation showed a high encapsulation efficiency of 89.4 ± 3.6%, a loading capacity of 17.89 ± 0.72 mg BSA protein/100 mg PLGA polymeric particles, low cytotoxicity and a controlled drug release characteristics in 43 days. The results demonstrate a great promise in the development of DPAP formulation for enhanced in vivo cell targeting. © 2017 American Institute of Chemical Engineers Biotechnol. Prog., 34:249-261, 2018.
    Matched MeSH terms: Biophysical Phenomena*
  17. Kabir MZ, Hamzah NAB, Ghani H, Mohamad SB, Alias Z, Tayyab S
    Spectrochim Acta A Mol Biomol Spectrosc, 2018 Jan 15;189:485-494.
    PMID: 28843881 DOI: 10.1016/j.saa.2017.08.051
    Interaction of an anticancer drug, vandetanib (VDB) with a ligand transporter, lysozyme (LYZ) was explored using multispectroscopic techniques, such as fluorescence, absorption and circular dichroism along with computational analysis. Fluorescence data and absorption results confirmed VDB-LYZ complexation. VDB-induced quenching was characterized as static quenching based on inverse correlation of KSV with temperature as well as kq values. The complex was characterized by the weak binding constant (Ka=4.96-3.14×103M-1). Thermodynamic data (ΔS=+12.82Jmol-1K-1; ΔH=-16.73kJmol-1) of VDB-LYZ interaction revealed participation of hydrophobic and van der Waals forces along with hydrogen bonds in VDB-LYZ complexation. Microenvironmental perturbations around tryptophan and tyrosine residues as well as secondary and tertiary structural alterations in LYZ upon addition of VDB were evident from the 3-D fluorescence, far- and near-UV CD spectral analyses, respectively. Interestingly, addition of VDB to LYZ significantly increased protein's thermostability. Molecular docking results suggested the location of VDB binding site near the LYZ active site while molecular dynamics simulation results suggested stability of VDB-LYZ complex. Presence of Mg2+, Ba2+ and Zn2+ was found to interfere with VDB-LYZ interaction.
    Matched MeSH terms: Biophysical Phenomena*
  18. Ling I, Kumari H, Mirzamani M, Sobolev AN, Garvey CJ, Atwood JL, et al.
    Chem Commun (Camb), 2018 Sep 25;54(77):10824-10827.
    PMID: 30140821 DOI: 10.1039/c8cc05650a
    We report on the assembly of three-fold axially compressed icosahedral arrays of the bowl shaped p-sulfonatocalix[4]arene molecules in the solid-state, intricately bound to dipicolinate and yttrium(iii) ions, with the compression reflected in Hirshfeld surface analyses. Solution studies show dissolution of the icosahedra intact, but with a geometrical rearrangement to regular icosahedra.
    Matched MeSH terms: Biophysical Phenomena
  19. Gollapalli M, Taha M, Ullah H, Nawaz M, AlMuqarrabun LMR, Rahim F, et al.
    Bioorg Chem, 2018 10;80:112-120.
    PMID: 29894890 DOI: 10.1016/j.bioorg.2018.06.001
    In search of better α-glucosidase inhibitors, a series of bis-indolylmethane sulfonohydrazides derivatives (1-14) were synthesized and evaluated for their α-glucosidase inhibitory potential. All derivatives exhibited outstanding α-glucosidase inhibition with IC50 values ranging between 0.10 ± 0.05 to 5.1 ± 0.05 μM when compared with standard drug acarbose having IC50 value 856.28 ± 3.15 μM. Among the series, analog 7 (0.10 ± 0.05 μM) with tri-chloro substitution on phenyl ring was identified as the most potent inhibitor of α-glucosidase (∼ 8500 times). The structure activity relationship has been also established. Molecular docking studies were also performed to help understand the binding interaction of the most active analogs with receptors. From the docking studies, it was observed that all the active bis-indolylmethane sulfonohydrazides derivatives showed considerable binding interactions within the active site (acarbose inhibition site) of α-glucosidase. We also evaluated toxicity of all derivatives and found none of them are toxic.
    Matched MeSH terms: Biophysical Phenomena
  20. Anas M, Gopir G, Miswan M
    Sains Malaysiana, 2018;47:999-1003.
    Type of bond is vital to understand the mechanism of interaction between corresponds atoms. We used three kinds of method
    to determine the type of bond between diatomic cluster of platinum and hydrogen: types of element, electronegativity
    and electron distribution. In this work, we found that the results from these three methods are not unanimously agreed
    with each other for bond type forming in platinum-hydrogen diatomic cluster. Thus, we conclude that the type of bond
    is hybrid of both: mainly covalent and slightly ionic.
    Matched MeSH terms: Biophysical Phenomena
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