Agriculture, a cornerstone of human civilization, faces rising challenges from climate change, resource limitations, and stagnating yields. Precise crop production forecasts are crucial for shaping trade policies, development strategies, and humanitarian initiatives. This study introduces a comprehensive machine learning framework designed to predict crop production. We leverage CMIP5 climate projections under a moderate carbon emission scenario to evaluate the future suitability of agricultural lands and incorporate climatic data, historical agricultural trends, and fertilizer usage to project yield changes. Our integrated approach forecasts significant regional variations in crop production across Southeast Asia by 2028, identifying potential cropland utilization. Specifically, the cropland area in Indonesia, Malaysia, Philippines, and Viet Nam is projected to decline by more than 10% if no action is taken, and there is potential to mitigate that loss. Moreover, rice production is projected to decline by 19% in Viet Nam and 7% in Thailand, while the Philippines may see a 5% increase compared to 2021 levels. Our findings underscore the critical impacts of climate change and human activities on agricultural productivity, offering essential insights for policy-making and fostering international cooperation.
Mass cultivation of high-value aromatic herbs such as Vietnamese coriander and Persicaria odorata required specific soil, nutrients, and irrigation, mostly found in the limited natural wetland. This study aimed to evaluate the capacity of P. odorata at different densities in nutrient removal and the growth performance of African catfish, Clarias gariepinus in aquaponic systems. P. odorata was cultivated for 40 d with less than 10% water exchange. The effects of increasing crop densities, from zero plants for the control, 0.035 ± 0.003 kg/m2 in Treatment 1, 0.029 ± 0.002 kg/m2 in Treatment 2, and 0.021 ± 0.003 kg/m2 in Treatment 3, were tested on the growth performance of C. gariepinus with an initial density of 3.00 ± 0.50 kg/m3. The specific growth rate (SGR), daily growth rate of fish (DGRf), and survival rate (SR) of the C. gariepinus were monitored. Nutrient removal, daily growth rate of plant (DGRp), relative growth rate (RGR), and the sum of leaf number (Ʃn) of the P. odorata plant were also recorded. It was found that nutrient removal percentage significantly increased with the presence of P. odorata at different densities. The growth performance of C. gariepinus was also affected by P. odorata density in each treatment. However, no significant difference was observed in the DGRp and RGR of the P. odorata (p>0.05), except for Ʃn values. Treatment 1 had the highest Ʃn number compared to Treatment 2 and Treatment 3, showing a significant difference (p<0.05). This study demonstrates that the presence of P. odorata significantly contributes to lower nutrient concentrations, supporting the fundamental idea that plants improve water quality in aquaponic systems.
Climate change has significantly altered the spatiotemporal distribution and phenology of marine organisms, yet the long-term trends and mechanisms driving these changes remain insufficiently understood. In this study, we analysed historical Noctiluca scintillans bloom data from coastal China (1933, 1952, 1981-2023), sea surface temperature (SST) records from the past 40 years, and 509 field samples using Single Molecule Real-Time (SMRT) sequencing (2019-2024). Our results indicate that SST is the primary driver of N. scintillans blooms, exhibiting a nonlinear unimodal correlation. Long-term SST warming has caused a northward shift in bloom locations, aligning with the 21.9°C-22.7°C isotherms, as reflected by the increasing average latitudes of bloom occurrences. Over the past 4 decades, bloom frequency and duration have followed an overall increasing trend, displaying an approximate 10-year cyclical pattern. Ocean warming has also contributed to earlier bloom initiation, extended peak bloom periods and delayed bloom termination, shaping the long-term dynamics of N. scintillans blooms. SMRT sequencing confirmed that local N. scintillans populations persist year-round, serving as latent seed sources that can rapidly bloom when environmental conditions become favourable. These findings provide critical insights into the dynamics of harmful algal blooms in the context of climate change and lay a foundation for future ecological and environmental research.
Matched MeSH terms: Dinoflagellida/growth & development
Frequent droughts significantly affect agricultural productivity and highlight the need for effective solutions to improve water availability for crops. This study investigates the potential of chitosan-based hydrogels, biodegradable biopolymers known for their water-retaining properties, to improve soil moisture and promote plant growth during drought periods. Chitosan hydrogels were synthesized using Pluronic F127 and compared with chitosan and chitosan in combination with sodium alginate (CS/Alg-Na). Comprehensive chemical characterizations were performed by Fourier transform infrared spectroscopy (FTIR), nuclear magnetic resonance (NMR) and field emission scanning electron microscopy (FESEM). The CS/Pl-F127 hydrogels showed high porosity and a water absorption capacity of 81.5 %, while the CS/Alg-Na exhibited a denser network with a capacity of 93.35 % and improved mechanical strength. Plants in the CS/Pl-F127 hydrogel had a shoot elongation rate of 5.9 mm/day on Day 9, which continued until Day 40. In contrast, shoot elongation in the CS/Alg-Na hydrogel peaked at 7.1 mm/day on Day 20 and maintained growth under drought conditions until Day 33. These results show that all chitosan-based hydrogels improve water use efficiency. CS/Alg-Na provides the best support for plant growth under drought conditions, followed by CS/Pl-F127 and pure chitosan.
Matched MeSH terms: Crops, Agricultural/growth & development
The presence of vegetation in urban soil is both visually appealing and environmentally beneficial. Vegetation contributes to changes in soil water content (SWC) and soil suction (SS) through transpiration. These changes ultimately affect slope stability, soil erosion, runoff generation, and water infiltration. This study closely examines the impact of tree canopy covers on SWC and SS dynamics in an urban slope site with a diverse mix of vegetation (trees and grass) in a tropical region. Field monitoring revealed that slope areas with higher tree canopy cover consistently exhibited lower SWC and higher SS at shallower depths, highlighting the stabilizing effects of vegetation. During wet periods, the difference in SWC between high and low canopy cover areas increased by 36% compared to dry periods, emphasizing the role of canopy cover in regulating soil moisture under varying climatic conditions. Furthermore, stations with lower canopy cover demonstrated a stronger correlation between SWC and relative humidity (R values of 0.64 in dry and 0.71 in wet periods) than those with higher canopy cover (R values of 0.57 in dry and 0.63 in wet periods), indicating distinct soil moisture retention patterns based on canopy density. These findings underscore the critical role of tree canopy cover in controlling SWC and SS dynamics, particularly for urban slope stability and sustainable landscape management.
Soil conditions of croplands are a frequent topic of scientific research. In contrast, less is known about large-scale commercial plantations of perennial crops such as oil palm. Oil palm is a globally important tropical commodity crop which contributes to both food and energy security due to its exceptional productivity. However, oil palm crops are associated with short lifecycles and high nutrient demands, which may disproportionately affect soil health. With the goal of exploring baseline soil properties in commercial oil palm plantations, we evaluated data from two large-scale soil surveys carried out in 2014/2015 and 2018/2019 across more than 400 fields located throughout Peninsular Malaysia. We examined variation in field-measured soil quality indicators with a focus on soil organic carbon content at three depths (0-15 cm, 15-30 cm, 30-45 cm) and investigated links with spatial covariates, including plantation age. We found SOC contents to be low (1.6-2%) across the sampled locations with limited correlation with spatial predictors employed in soil organic carbon modelling. Furthermore, we found that immature and young mature plantations, which consisted of fields that were re-planted as part of a 20-year-long oil palm rotation, were characterised by significantly lower soil organic carbon content than the mature plantations. This suggests that management practices should target younger oil palm plantations for soil organic conservation measures to increase the overall baseline SOC content, which will subsequently accumulate over the plantation's lifespan. We further provide recommendations for future soil sampling efforts, which could increase the robustness of collected data and facilitate their use for soil monitoring through modelling approaches involving, for example, digital soil mapping.
Matched MeSH terms: Crops, Agricultural/growth & development
Probiotics are gaining attention for their benefits as a supplement to improve oral health. This study aimed to evaluate the antibacterial effect of the probiotic Lactobacillus helveticus against Porphyromonas gingivalis, a significant pathogen in periodontal diseases. Antibacterial susceptibility was assessed using the well diffusion assay, with 0.12% chlorhexidine (CHX) served as the positive control. Biofilm biomass was evaluated using crystal violet staining. Cell viability in P. gingivalis treated with L. helveticus was determined using the LIVE/DEAD Baclight bacterial assay via fluorescence microscopy. Ultra-morphological alterations in these cells were further examined using Field Emission Scanning Electron Microscopy. The results indicated that L. helveticus significantly reduced the growth of P. gingivalis. The highest concentration of 109 cells/mL achieved the most substantial inhibition in the well diffusion assay, followed by concentrations of 108 cells/mL and 107 cells/mL, which demonstrated a clear dose-dependent response. Furthermore, biofilms of P. gingivalis treated with L. helveticus exhibited a notable biomass reduction of up to 85% at the highest concentrations. LIVE/DEAD staining confirmed a decreased in cell viability among the treated populations, while FESEM analysis revealed morphological disruptions in P. gingivalis cells treated with L. helveticus. These findings suggest that L. helveticus has a potent antibacterial effect against P. gingivalis, highlighting the need for further research to identify the optimal probiotic strategies that could enhance periodontal health.
Vertebrate granivores destroy plant seeds, but whether animal-induced seed mortality alters plant recruitment varies with habitat context, seed traits, and among granivore species. An incomplete understanding of seed predation makes it difficult to predict how widespread extirpations of vertebrate granivores in tropical forests might affect tree communities, especially in the face of habitat disturbance. Many tropical forests are simultaneously affected by animal loss as well as habitat disturbance, but the consequences of each for forest regeneration are often studied separately or additively, and usually on a single plant demographic stage. The combined impacts of these threats could affect plant recruitment in ways that are not apparent when studied in isolation. We used wire cages to exclude large (elephants), medium, (sambar deer, bearded pigs, muntjac deer), and small (porcupines, chevrotains) ground-dwelling mammalian granivores and herbivores in logged and unlogged forests in Malaysian Borneo. We assessed the interaction between habitat disturbance (selective logging) and experimental defaunation on seed survival, germination, and seedling establishment in five dominant dipterocarp tree species spanning a 21-fold gradient in seed size. Granivore-induced seed mortality was consistently higher in logged forest. Germination of unpredated seeds was reduced in logged forest and in the absence of small to large-bodied mammals. Experimental defaunation increased germination and reduced seed removal but had little effect on seed survival. Seedling recruitment however, was more likely where logging and animal loss occurred together. The interacting effects of logging and hunting could therefore, actually increase seedling establishment, suggesting that the loss of mammals in disturbed forest could have important consequences for forest regeneration and composition.
Simulium (Gomphostilbia) maleewongae sp. nov. is described based on the adult males and females, their pupal exuviae, and larvae from Thailand. This new species is placed in the Simulium gombakense species-group of Simulium (Gomphostilbia). It is characterized by the female cibarium with a cup-like appendage, male ventral plate deeply depressed ventromedially, pupal gill composed of an inflated structure and eight slender filaments, cone-shaped pupal terminal hooks, and cocoon with an anterodorsal projection. Taxonomic notes are given to separate this new species from 10 other species of the same species-group known from China, India, Malaysia, Thailand, Nepal, and Vietnam. Keys to identify all 11 species of the S. gombakense species-group are provided for females, males, pupae, and larvae.
Among the genus Streptococcus, S. pyogenes and S. pneumoniae are the major causes of pharyngitis, impetigo, pneumonia and meningitis in humans. Streptococcus spp. are facultative anaerobes that are nutritionally fastidious, yet survive in the environment and target the predisposed population. Antibacterial disinfectants have been partially effective only, indicating the need for novel preventative measures and to understand mechanisms of bacterial resistance. Acanthamoeba is a free-living protist that is known to harbour microbial pathogens, provide shelter, and assist in their transmission to susceptible population. The overall aim of this study was to determine whether S. pyogenes and S. pneumoniae can interact with A. castellanii by associating, invading, and surviving inside trophozoites and cysts. It was observed that both S. pyogenes and S. pneumoniae were able to associate as well as invade and/or taken up by the phagocytic A. castellanii trophozoite. Notably, S. pyogenes and S. pneumoniae survived the encystation process, avoided phagocytosis, multiplied, and exhibited higher recovery from the mature cysts, compared with the trophozoite stage (approximately 2 bacteria per amoebae ratio for cyst stage versus 0.02 bacteria per amoeba ration for trophozoite stage). As Acanthamoeba cysts are resilient and can disperse through the air, A. castellanii can act as a vector in providing shelter, facilitating growth and possibly genetic exchanges. In addition, these interactions may contribute to S. pyogenes and S. pneumoniae survival in harsh environments, and transmission to susceptible population and possibly affecting their virulence. Future studies will determine the molecular mechanisms associated with Acanthamoeba interactions with Streptococcus and the evolution of pathogenic bacteria and in turn expedite the discovery of novel therapeutic and/or preventative measures.
Two new species, Simulium (Gomphostilbia) sunapii and S. (G.) rangatense, are described based on adults, pupae, and mature larvae from Flores, in the eastern part of the Sunda Archipelago, Indonesia. Simulium (G.) sunapii sp. nov. is placed in the S. asakoae species-group, representing the easternmost geographical record for the group in this archipelago. It is characterized by a small number of male upper-eye large facets in eight or nine vertical columns and 12 horizontal rows. Simulium (G.) rangatense sp. nov. is placed in the S. ceylonicum species-group and is characterized by the pupal gill with six filaments. This new species, together with two related species of the S. ceylonicum species-group in Flores, suggests the species radiation of this species-group might have been accompanied by a reduction of the number of pupal gill filaments from eight to four through six. Taxonomic notes are provided to distinguish these two new species from related species.
Simulium (Asiosimulium) saeungae sp. nov. (Diptera: Simuliidae) is described based on females, males, pupae, and mature larvae collected from Nan Province, Northern Thailand. It is characterized by the medium-long cerci in the female, enlarged hind basitarsus, and broad ventral plate with its posterior margin not deeply concave in the male, arborescent pupal gill with 42-56 filaments in the pupa and smaller number of primary rays of the labral fan (30-33) in the larva. This is the fifth species of the subgenus Asiosimulium, the second smallest among 10 subgenera in the Oriental Region. Taxonomic notes are given to distinguish this new species from the three known species from Thailand and one from Nepal.
Flavonoids are polyphenols that are important organic chemicals in plants. The health benefits of flavonoids that result in high commercial values make them attractive targets for large-scale production through bioengineering. Strategies such as engineering a flavonoid biosynthetic pathway in microbial hosts provide an alternative way to produce these beneficial compounds. Escherichia coli, Saccharomyces cerevisiae and Streptomyces sp. are among the expression systems used to produce recombinant products, as well as for the production of flavonoid compounds through various bioengineering approaches including clustered regularly interspaced short palindromic repeats (CRISPR)-based genome engineering and genetically encoded biosensors to detect flavonoid biosynthesis. In this study, we review the recent advances in engineering model microbial hosts as being the factory to produce targeted flavonoid compounds.
Ants are social insects with some significant roles in the ecosystem, including acting as predators for various insect pests. Myopopone castanea ants is a predatorfor the larvae of Oryctes rhinoceros pest. The existence of a similar niche of life between M. castanea ants and O. rhinoceros larvae opens an excellent opportunity to utilize these ants as biological agents. The research was conducted to study some aspects biology of M. castanea so that later it can be applied to mass rearing of natural enemies in the laboratory. The study was conducted by maintaining 50 eggs of M. castanea ant. Then, the eggs placed on two pieces of decayed palm oil stem together with twenty individual worker ants and ten individual end instar larvae. It needs five replications for the experiment. The results showed that egg stadia length was 13.8 days. It found five instars within M. castanea ant larvae with varying lengths of each stage. It takes 17.2 days for worker ant pupae to go through stadia pupa and 17.9 days for female ant pupae. The survival rate of M. castanea ant life from eggs until imago is 56.4%, which means that from several groups of eggs laid by queen ants, only about half have succeeded in becoming ant imago.
1. The effects of a mixture of 12 Lactobacillus strains (LC) on the growth performance, abdominal fat deposition, serum lipids and weight of organs of broiler chickens were studied from 1 to 42 d of age. 2. One hundred and thirty-six 1-d-old male broiler chicks were assigned at random to two dietary treatments: a basal diet (control), and a basal diet with 0.1% LC. 3. The supplementation of LC in broiler diets improved the body weight gain and feed conversion rate from 1 to 42 d of age and was effective in reducing abdominal fat deposition but only after 28 d of age. 4. The LC diets reduced serum total cholesterol, low density lipoprotein (LDL) cholesterol and triglycerides in broilers from 21 to 42 d of age. However, there was no significant difference in serum high density lipoprotein (HDL) cholesterol between control and LC-fed broilers. There was also no significant difference in the weights of organs of control and LC-fed broilers. 5. The results indicated that the mixture of 12 Lactobacillus strains have a hypolipidaemic effect on broilers.
The biofilm degradation of Aggregatibacter actinomycetemcomitans is essential as a complete periodontal disease therapy, and here we show the effects of potential probiotic bacteria such as Lactobacillus spp. for the biofilm of several serotypes of A. actinomycetemcomitans strains. Eight of the 13 species showed the competent biofilm degradation of ≥ 90% reduction in biofilm values in A. actinomycetemcomitans Y4 (serotype b) as well as four of the seven species for the biofilm of A. actinomycetemcomitans OMZ 534 (serotype e). In contrast, the probiotic bacteria did not have a big impact for the degradation of A. actinomycetemcomitans SUNY 75 (serotype a) biofilm. The dispersed A. actinomycetemcomitans Y4 cells through the biofilm detachment were still viable and plausible factors for the biofilm degradation were not due to the lactic acid and low pH conditions. The three enzymes, protease, lipase, and amylase may be responsible for the biofilm degradation; in particular, lipase was the most effective enzyme for the biofilm degradation of A. actinomycetemcomitans Y4 along with the protease activity which should be also important for the other serotypes. Remarkable lipase enzyme activities were detected from some of the potential probiotics and a supporting result using a lipase inhibitor presented corroborating evidence that lipase activity is one of the contributing factors for biofilm degradation outside of the protease which is also another possible factor for the biofilm of the other serotype of A. actinomycetemcomitans strains. On the other hand, the biofilm of A. actinomycetemcomitans SUNY 75 (serotype a) was not powerfully degraded by the lipase enzyme because the lipase inhibitor was slightly functional for only two of potential probiotics.
Water quality in Singapore's coastal area was evaluated with microbial indicators, pathogenic vibrios, chemical tracers and physico-chemical parameters. Sampling sites were grouped into two clusters (coastal sites at (i) northern and (ii) southern part of Singapore). The coastal sites located at northern part of Singapore along the Johor Straits exhibited greater pollution. Principal component analysis revealed that sampling sites at Johor Straits have greater loading on carbamazepine, while turbidity poses greater influence on sampling sites at Singapore Straits. Detection of pathogenic vibrios was also more prominent at Johor Straits than the Singapore Straits. This study examined the spatial variations in Singapore's coastal water quality and provided the baseline information for health risk assessment and future pollution management.
Twelve goats were inoculated with 40,000 third-stage Haemonchus contortus larvae and two were killed on each of Days 4, 7, 11, 14, 18 and 21 after inoculation (DAI). The number of worms that established, and the site of development were recorded. More worms established in the fundic, than in the middle or pyloric thirds of the abomasum. Early development occurred within the mucosa; emergence into the lumen started between 7 and 11 days after infection. By 4 DAI, all worms had completed the third moult to the L4 stage. At 11 DAI the majority of the worms were adults. A mean of 13.2% of the female worms had eggs in their uteri at 18 DAI; by 21 DAI more than half of the female worms had eggs in their uteri. The development of H. contortus was essentially similar to that described in sheep.
Studies on larval population densities and adult emergence rates of the Brugian filariasis vectors Mansonia bonneae Edwards and Ma. dives Schiner were conducted in freshwater swamp forest bordering the Sadong River, Serian District, Sarawak, East Malaysia, during 1984-85. Three species of aquatic host-plants in the Family Araceae were identified as supporting immature stages of the Ma. bonneae/dives complex. Proportions of positive plants were 4.7%, 6.5% and 3.4% with 6.4 +/- 2.6, 7.3 +/- 2.8 and 10.1 +/- 1.1 larvae per positive plant, respectively, for the plant species Homalomena cordata Schott, H. rostrata Griffiths and Hydrostemma motleyi (Hook. f.) Mabberley. These data indicate no significant preferences between the three types of host-plant. Detailed monitoring of the host-plant H. cordata revealed no significant monthly fluctuations in larval density per plant nor the proportion of positive plants. 11.6% of larvae were Ma. dives and 88.4% were Ma. bonneae. Mean daily yields of Ma. bonneae/dives adults per square metre of H. cordata vegetated water surface were 0.45 males plus 0.57 females during the wet season (December-February) compared with 0.2 males plus 0.31 females during the dry season (June-August). Thus output of adults per plant was approximately halved, and suitable breeding areas were further reduced, during the dry season. By extrapolation from these rates, a crude mean estimate for productivity of Ma. bonneae/dives females is 1.6 million per hectare per annum in swamp forest habitats vegetated with any of the host-plants studied.
Rigorous research has been carried out regarding the cultivation of Ganoderma lucidum using different agricultural residues. Nevertheless, large-scale cultivation and the separation of active compounds of G. lucidum are still challenges for local farmers. The objective of this study was to evaluate the use of oil palm waste fibers such as empty fruit bunch fibers and mesocarp fibers as effective substrates for the growth of G. lucidum mycelia to study the possibility of solid-state cultivation and to determine the optimum conditions necessary for the growth of mycelia of this mushroom on these waste fibers. Various parameters such as temperature, pH, humidity, and carbon and nitrogen compositions required for the optimum growth of mycelia have been determined. Oil palm fibers are a vivid source of lignocellulose, and their availability in Malaysia is high compared to that of sawdust. G. lucidum is a wood-rotting fungi that can easily decay and utilize this lignocellulose biomass, a major agricultural waste in Malaysia.