Displaying publications 221 - 240 of 244 in total

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  1. Barnett R, Westbury MV, Sandoval-Velasco M, Vieira FG, Jeon S, Zazula G, et al.
    Curr Biol, 2020 Dec 21;30(24):5018-5025.e5.
    PMID: 33065008 DOI: 10.1016/j.cub.2020.09.051
    Homotherium was a genus of large-bodied scimitar-toothed cats, morphologically distinct from any extant felid species, that went extinct at the end of the Pleistocene [1-4]. They possessed large, saber-form serrated canine teeth, powerful forelimbs, a sloping back, and an enlarged optic bulb, all of which were key characteristics for predation on Pleistocene megafauna [5]. Previous mitochondrial DNA phylogenies suggested that it was a highly divergent sister lineage to all extant cat species [6-8]. However, mitochondrial phylogenies can be misled by hybridization [9], incomplete lineage sorting (ILS), or sex-biased dispersal patterns [10], which might be especially relevant for Homotherium since widespread mito-nuclear discrepancies have been uncovered in modern cats [10]. To examine the evolutionary history of Homotherium, we generated a ∼7x nuclear genome and a ∼38x exome from H. latidens using shotgun and target-capture sequencing approaches. Phylogenetic analyses reveal Homotherium as highly divergent (∼22.5 Ma) from living cat species, with no detectable signs of gene flow. Comparative genomic analyses found signatures of positive selection in several genes, including those involved in vision, cognitive function, and energy consumption, putatively consistent with diurnal activity, well-developed social behavior, and cursorial hunting [5]. Finally, we uncover relatively high levels of genetic diversity, suggesting that Homotherium may have been more abundant than the limited fossil record suggests [3, 4, 11-14]. Our findings complement and extend previous inferences from both the fossil record and initial molecular studies, enhancing our understanding of the evolution and ecology of this remarkable lineage.
    Matched MeSH terms: Animal Distribution
  2. Pramasivan S, Ngui R, Jeyaprakasam NK, Liew JWK, Low VL, Mohamed Hassan N, et al.
    Malar J, 2021 Oct 29;20(1):426.
    PMID: 34715864 DOI: 10.1186/s12936-021-03963-0
    BACKGROUND: Plasmodium knowlesi, a simian malaria parasite infection, increases as Plasmodium falciparum and Plasmodium vivax infections decrease in Johor, Malaysia. Therefore, this study aimed to identify the distribution of vectors involved in knowlesi malaria transmission in Johor. This finding is vital in estimating hotspot areas for targeted control strategies.

    METHODS: Anopheles mosquitoes were collected from the location where P. knowlesi cases were reported. Cases of knowlesi malaria from 2011 to 2019 in Johor were analyzed. Internal transcribed spacers 2 (ITS2) and cytochrome c oxidase subunit I (COI) genes were used to identify the Leucosphyrus Group of Anopheles mosquitoes. In addition, spatial analysis was carried out on the knowlesi cases and vectors in Johor.

    RESULTS: One hundred and eighty-nine cases of P. knowlesi were reported in Johor over 10 years. Young adults between the ages of 20-39 years comprised 65% of the cases. Most infected individuals were involved in agriculture and army-related occupations (22% and 32%, respectively). Four hundred and eighteen Leucosphyrus Group Anopheles mosquitoes were captured during the study. Anopheles introlatus was the predominant species, followed by Anopheles latens. Spatial analysis by Kriging interpolation found that hotspot regions of P. knowlesi overlapped or were close to the areas where An. introlatus and An. latens were found. A significantly high number of vectors and P. knowlesi cases were found near the road within 0-5 km.

    CONCLUSIONS: This study describes the distribution of P. knowlesi cases and Anopheles species in malaria-endemic transmission areas in Johor. Geospatial analysis is a valuable tool for studying the relationship between vectors and P. knowlesi cases. This study further supports that the Leucosphyrus Group of mosquitoes might be involved in transmitting knowlesi malaria cases in Johor. These findings may provide initial evidence to prioritize diseases and vector surveillance.

    Matched MeSH terms: Animal Distribution
  3. Rezagholinejad S, Arshad A, Amin SMN, Ara R
    J Environ Biol, 2016 07;37(4 Spec No):697-703.
    PMID: 28779728
    The composition of fish larvae and their diversity in different habitats are very important for fisheries management. Larval fishes were investigated in a mangrove estuary of Marudu Bay, Sabah, Malaysia from October 2012 to September 2013 at five different sites. Monthly samples of fish larvae were collected at five sampling sites by a plankton net with a mouth opening of 40.5 cm in diameter. In total, 3879 larval fish were caught in the investigated area. The mean density of ichthyoplankton at this area was 118 larvae/100 m(3). The fish larval assemblage comprised of 20 families whereas 13 families occurred at St1, 16 at St2, 16 at St3, 12 at St4 and 16 at St5. The top major families were Sillaginidae, Engraulidae, Mugilidae and Sparidae with Sillaginidae consisted 44% of total larval composition. St3 with 143 larvae/100 m(3) had the highest density amongst the stations which was due to higher abundance of Sillaginidae. Shannon-Wiener diversity index represented significant variation during monsoon and inter-monsoon seasons, peaking in the months December-January and May-June. However, Shannon-Wiener index, evenness and family richness showed significant differences among stations and months (p < 0.05).
    Matched MeSH terms: Animal Distribution
  4. Davis HR, Grismer LL, Klabacka RL, Muin MA, Quah ES, Anuar S, et al.
    Zootaxa, 2016 Apr 12;4103(2):137-53.
    PMID: 27394624 DOI: 10.11646/zootaxa.4103.2.4
    Twelve species of Ansonia occur on the Thai-Malay peninsula, of which, five from Peninsular Malaysia, form a monophyletic group. One of these, A. jeetsukumarani, is endemic to the Titiwangsa Mountain Range, in which, we discovered a new population of Ansonia that is not A. jeetsukumarani or even its closest relative. Based on morphology, color pattern, and molecular phylogenetic analyses using the mitochondrial genes 12s and 16s rRNA, we have determined that this new species, A. smeagol sp. nov., forms the sister lineage to an upland, monophyletic group composed of A. jeetsukumarani, A. lumut, A. malayana, and A. penangensis. We have noted similar biogeographic patterns in other taxa from the Titiwangsa Mountain Range in a number of upland lineages in Peninsular Malaysia. We hypothesize that the phylogeographic structure of these upland populations is a result of stochastic processes stemming from interaction of climate-driven forest dynamics and life histories.
    Matched MeSH terms: Animal Distribution
  5. Dow RA, Afendy A, Rahman H
    Zootaxa, 2016 Apr 14;4103(4):390-5.
    PMID: 27394744 DOI: 10.11646/zootaxa.4103.4.7
    Telosticta fugispinosa sp. nov. (holotype male, from Borneo, Sabah, West Coast division, Crocker Range National Park, Inobong, Kimamabang waterfall stream system, 21 ix 2012, deposited in RMNH) is described from Kinabalu National Park and Crocker Range National Park in Sabah, Malaysian Borneo. It is distinguished from all other species of Telosticta by the form of the male anal appendages.
    Matched MeSH terms: Animal Distribution
  6. Cabra-García J, Brescovit AD
    Zootaxa, 2016 Jan 27;4069(1):1-183.
    PMID: 27395905 DOI: 10.11646/zootaxa.4069.1.1
    A taxonomic revision and phylogenetic analysis of the spider genus Glenognatha Simon, 1887 is presented. This analysis is based on a data set including 24 Glenognatha species plus eight outgroups representing three related tetragnathine genera and one metaine as the root. These taxa were scored for 78 morphological characters. Parsimony was used as the optimality criterion and a sensitivity analysis was performed using different character weighting concavities. Seven unambiguous synapomorphies support the monophyly of Glenognatha. Some internal clades within the genus are well-supported and its relationships are discussed. Glenognatha as recovered includes 27 species, four of them only known from males. A species identification key and distribution maps are provided for all. New morphological data are also presented for thirteen previously described species. Glenognatha has a broad distribution occupying the Neartic, Afrotropic, Indo-Malaya, Oceania and Paleartic regions, but is more diverse in the Neotropics. The following eleven new species are described: G. vivianae n. sp., G. caaguara n. sp., G. boraceia n. sp. and G. timbira n. sp. from southeast Brazil, G. caparu n. sp., G. januari n. sp. and G. camisea n. sp. from the Amazonian region, G. mendezi n. sp., G. florezi n. sp. and G. patriceae n. sp. from northern Andes and G. gouldi n. sp. from Southern United States and central Mexico. Females of G. minuta Banks, 1898, G. gaujoni Simon, 1895 and G. gloriae (Petrunkevitch, 1930) and males of G. globosa (Petrunkevitch, 1925) and G. hirsutissima (Berland, 1935) are described for the first time. Three new combinations are proposed in congruence with the phylogenetic results: G. argyrostilba (O. P.-Cambridge, 1876) n. comb., G. dentata (Zhu & Wen, 1978) n. comb. and G. tangi (Zhu, Song & Zhang, 2003) n. comb., all previously included in Dyschiriognatha Simon, 1893. The following taxa are newly synonymized: Dyschiriognatha montana Simon, 1897, Glenognatha mira Bryant, 1945 and Glenognatha maelfaiti Baert, 1987 with Glenognatha argyrostilba (Pickard-Cambridge, 1876) and Glenognatha centralis Chamberlin, 1925 with Glenognatha minuta Banks, 1898.
    Matched MeSH terms: Animal Distribution
  7. Tan MK, Kamaruddin KN
    Zootaxa, 2016 Jan 19;4066(5):552-60.
    PMID: 27395853 DOI: 10.11646/zootaxa.4066.5.3
    A new species of Gryllotalpa mole cricket (Orthoptera: Gryllotalpidae) is described from Bukit Larut, Perak, Peninsular Malaysia: Gryllotalpa permai sp. n. Acoustic analysis of the male calling songs were also provided for Gryllotalpa permai sp. n. and the morphologically similar Gryllotalpa fulvipes.
    Matched MeSH terms: Animal Distribution
  8. Tan MK, Kamaruddin KN
    Zootaxa, 2016 May 12;4111(1):21-40.
    PMID: 27394894 DOI: 10.11646/zootaxa.4111.1.2
    Bukit Larut is a hill station at the southern tip of the Bintang Range, Perak of Peninsular Malaysia. While the biodiversity of Bukit Larut has been previously documented, its entomofauna, including the Orthoptera, remains relatively unknown. A faunistic survey was conducted in 2015 as part of the continuous exploration of the highlands in Malay Peninsula. An annotated species list of 71 (24 Caelifera and 47 Ensifera) species of Orthoptera from ten families (five from each order) is presented here. While the coverage of lineages in the orthopteran phylogeny is well-represented, the diversity in Bukit Larut is dominated by the three main families: Acrididae, Gryllidae and Tettigoniidae. Eight new locality records for Bukit Larut and/or Peninsular Malaysia and potential new species awaiting description highlight that the orthopteran diversity in Bukit Larut is not exhaustive.
    Matched MeSH terms: Animal Distribution
  9. Bezděk J
    Zootaxa, 2016 Mar 04;4085(4):504-24.
    PMID: 27394316 DOI: 10.11646/zootaxa.4085.4.3
    The species of the genus Coeligetes Jacoby, 1884 distributed in Malaysia and Indonesia are revised, illustrated and keyed. New species, C. howardi sp. nov. from Borneo is described. New synonymy Coeligetes submetallica Jacoby, 1884 = C. wilcoxi Mohamedsaid, 1994 (syn. nov.) is proposed. New genus and species Coeligetoides trifurcatus gen. nov., sp. nov. (Malaysia, Brunei, Indonesia and Thailand) is described, illustrated and compared with related genera.
    Matched MeSH terms: Animal Distribution
  10. Tong X, Wang Z, Mirab-Balou M
    Zootaxa, 2016 Jan 05;4061(2):181-8.
    PMID: 27395492 DOI: 10.11646/zootaxa.4061.2.8
    Two new species of the genus Asprothrips Crawford, A. bucerus sp. n. and A. punctulosus sp. n. are described and illustrated from China. A. bimaculatus Michel & Ryckewaert, previously known only from Martinique in the French West Indies and Malaysia, is newly recorded from mainland China and Taiwan, along with the first descriptive notes of the male, and the record from China of A. fuscipennis Kudô is considered a misidentification of A. bucerus sp. n. The generic diagnosis of Asprothrips is briefly summarized and an updated key to world species of the genus is also presented.
    Matched MeSH terms: Animal Distribution
  11. Sinev AY, Yusoff FM
    Zootaxa, 2016 Jun 01;4117(3):399-410.
    PMID: 27395182 DOI: 10.11646/zootaxa.4117.3.7
    Study of Ephemeroporus Frey, 1982 populations from Peninsular Malaysia revealed a new species. Ephemeroporus malaysiaensis sp. nov. is characterized by the presence of four-five large denticles on anal margin of postabdomen instead of two-three, and five distinctive pigmented spots on each valve. Pigmented spots on the valves were never recorded for any species of family Chydoridae. E. malaysiaensis sp. nov. seems to be another endemic Chydoridae species of South-East Asia. E. malaysiaensis sp. nov. is a rare species, associated with emergent macrophytes in the littoral zone of shallow lake. Most of Ephemeroporus populations from Peninsular Malaysia belong to eurybiotic Paleotropical species Ephemeroporus barroisi (Richard, 1984).
    Matched MeSH terms: Animal Distribution
  12. Karin BR, Das I, Bauer AM
    Zootaxa, 2016 Mar 22;4093(3):407-23.
    PMID: 27394504 DOI: 10.11646/zootaxa.4093.3.7
    We describe two new species of skinks from Gunung Penrissen, Sarawak, Malaysia, in northern Borneo, Tytthoscincus batupanggah sp. nov. and T. leproauricularis sp. nov. Morphological and molecular analyses both corroborate the two new species as unique compared to all other Tytthoscincus and additional Sphenomorphus that are candidates for taxonomic placement in the genus Tytthoscincus. Despite their phenotypic similarity and sympatric distribution, a molecular analysis shows that the new species are not sister taxa and exhibit a deep genetic divergence between each of their respective sister taxa. We discuss how historical climatic and geographic processes may have led to the co-distribution of two relatively distantly related phenotypically similar species. In light of these discoveries, we also emphasize the importance of conserving primary montane tropical rainforest for maintaining species diversity.
    Matched MeSH terms: Animal Distribution
  13. Viraktamath CA
    Zootaxa, 2016 Nov 17;4193(3):zootaxa.4193.3.3.
    PMID: 27988690 DOI: 10.11646/zootaxa.4193.3.3
    Species of Signoretia Stål from the Oriental region are reviewed and types of five species described by Baker, two species described by Distant and one species described by Schmidt are illustrated. A checklist of 20 species of the genus from the Oriental region including 9 new species is given. The new species described and illustrated are Signoretia dulitensis sp. nov. (Malaysia: Mt Dulit), S. lunglei sp. nov. (India: Mizoram), S. mishmiensis sp. nov. (Myanmar: Mishmi Hills), S. quoinensis sp. nov. (Malaysia: Quoin Hill), S. rubra sp. nov. (Thailand: Chiang Mai), S. sahyadrica sp. nov. (India: Kerala), S. similaris sp. nov. (Vietnam: Fyan), S. sinuata sp. nov. (India: West Bengal) and S. takiyae sp. nov. (India: Andaman Is.). Both S. aureola Distant and S. maculata Baker are redescribed and illustrated. Lectotypes are designated for S. greeni Distant and S. aureola Distant.
    Matched MeSH terms: Animal Distribution
  14. Evenhuis NL
    Zootaxa, 2016 Nov 10;4189(2):zootaxa.4189.2.1.
    PMID: 27988730 DOI: 10.11646/zootaxa.4189.2.1
    The Strongylophthalmyia punctata subgroup, comprising 24 species with armored fore femora, and restricted primarily to SE Asia, is reviewed. Eighteen new species, S. albisternum, n. sp. (Thailand), S. borneensis, n. sp. (Borneo), S. caestus, n. sp. (Philippines), S. darlingi, n. sp. (Sumatra), S. federeri, n. sp. (Philippines), S. hauseri, n. sp. (Thailand, Vietnam), S. indochinensis, n. sp. (Cambodia, Thailand, Vietnam), S. inundans, n. sp. (Philippines), S. laosensis, n. sp. (Laos), S. lowi, n. sp. (Peninsular Malaysia), S. malayensis, n. sp. (Peninsular Malaysia), S. nigripalpis, n. sp. (Peninsular Malaysia), S. oxybeles, n. sp. (Sumatra), S. pappi, n. sp. (Thailand), S. phillindablank, n. sp. (China), S. sichuanica, n. sp. (China), S. sumatrana, n. sp. (Sumatra), and S. thailandica, n. sp. (Thailand) are described and illustrated, S. microstyla Shatalkin and S. punctata Hennig are redescribed based on examination of the holotypes, and a key to species of the subgroup is presented. A general taxonomic overview of the genus Strongylophthalmyia is given with discussion of and keys to proposed species groups.
    Matched MeSH terms: Animal Distribution
  15. Evenhuis NL, Gang Y
    Zootaxa, 2016 Dec 06;4205(3):zootaxa.4205.3.2.
    PMID: 27988574 DOI: 10.11646/zootaxa.4205.3.2
    The bee fly genus Euchariomyia Bigot is reviewed and new records from the Oriental Region are given. Five names (for four species-level taxa) have been associated with species in the genus. Examinations of types, as well as homotypic and topotypic specimens, shows all five names to belong to a highly variable single species, Euchariomyia dives Bigot. The following species are here shown to be the same as Euchariomyia dives Bigot: Bombylius pulchellus Wulp, 1880, Bombylius scintillans Brunetti, 1909, and Bombylius brunettii Senior-White, 1922, n. syn. The genus is known primarily from the southern and eastern Oriental Region and ranges into the Palaearctic in eastern China. We extend the distribution of the genus with new records in the southeastern Oriental Region [Indonesia (Sumatra), Laos, Peninsular Malaysia, and Vietnam].
    Matched MeSH terms: Animal Distribution
  16. Bakar AA, Adamson EAS, Juliana LH, Nor Mohd SA, Wei-Jen C, Man A, et al.
    PLoS One, 2018;13(9):e0202945.
    PMID: 30183729 DOI: 10.1371/journal.pone.0202945
    Management of wild fisheries resources requires accurate knowledge on which species are being routinely exploited, but it can be hard to identify fishes to species level, especially in speciose fish groups where colour patterns vary with age. Snappers of the genus Lutjanus represent one such group, where fishes can be hard to identify and as a result fisheries statistics fail to capture species-level taxonomic information. This study employs traditional morphological and DNA barcoding approaches to identify adult and juvenile Lutjanus species harvested in Malaysian waters. Our results reveal a suite of species that differs markedly from those that have previously been considered important in the Malaysian wild-capture fishery and show that official fisheries statistics do not relate to exploitation at the species level. Furthermore, DNA barcoding uncovered two divergent groups of bigeye snapper ('Lutjanus lutjanus') distributed on either side of the Malay Peninsula, displaying a biogeographical pattern similar to distributions observed for many co-occurring reef-distributed fish groups. One of these bigeye snapper groups almost certainly represents an unrecognized species in need of taxonomic description. The study demonstrates the utility of DNA barcoding in uncovering overlooked diversity and for assessing species catch composition in a complicated but economically important taxonomic group.
    Matched MeSH terms: Animal Distribution
  17. Takaoka H, Sofian-Azirun M, Ya'cob Z, Chen CD, Lau KW, Pham HT
    Zootaxa, 2014;3838(3):347-66.
    PMID: 25081781 DOI: 10.11646/zootaxa.3838.3.6
    Four new species of black flies are described, and three others are reported as newly recorded, based on adults reared from pupae, pupae and larvae collected in and near Tam Dao National Park, Vinh Phuc Province, Vietnam. New species include Simulium (Gomphostilbia) hongthaii sp. nov., S. (G.) tamdaoense sp. nov. (both species placed in the asakoae species-group), S. (Simulium) taythienense sp. nov. and S. (S.) xuandai sp. nov. (the two latter species placed in the striatum species-group). Newly recorded species are S. (G.) brinchangense Takaoka, Sofian-Azirun & Hashim, S. (Nevermannia) aureohirtum Brunetti and S. (S.) brevipar Takaoka & Davies. These discoveries increase the number of species of black flies known in Vietnam from 21 to 28. 
    Matched MeSH terms: Animal Distribution
  18. Oberhummer E, Barten C, Schweizer M, Das I, Haas A, Hertwig ST
    Zootaxa, 2014;3835(1):59-79.
    PMID: 25081435 DOI: 10.11646/zootaxa.3835.1.3
    The megophryid frogs Leptobrachella brevicrus, Leptolalax dringi and Megophrys dringi are species exclusively known  from highly localised areas in isolated mountain ranges on Borneo. The tadpoles and adults in this study were collected at the shared type locality for the three species in Gunung Mulu National Park, Sarawak, Malaysia (Borneo). The species identities of larvae were determined via comparison to syntopic adults using DNA barcoding techniques based on partial 16S rRNA mitochondrial gene sequences. The genetic data supported the status of the three taxa as valid species. Descriptions of colouration in life and after preservation, external morphological features, morphometric measurements and ecological notes in comparison to congeneric species are supplied. The tadpoles of L. brevicrus and L. dringi show similar adaptations to a fossorial lifestyle. These include an elongated, vermiform body, a relatively long tail and small eyes. Both were found in the gravel beds of a small mountain stream. In contrast, the larvae of M. dringi are adapted to occupying and feeding at the surface of pools within the stream. 
    Matched MeSH terms: Animal Distribution
  19. Steinhoff PO, Butler SG, Dow RA
    Zootaxa, 2016 Feb 18;4083(1):99-108.
    PMID: 27394221 DOI: 10.11646/zootaxa.4083.1.5
    The final instar larva of Orthetrum borneense Kimmins, 1936, is described and figured for the first time based on exuviae from three male and six female larvae collected in Sarawak, Borneo (East Malaysia). It is compared with an early instar larva, which was matched to the adult O. borneense by DNA barcoding, and the known larvae of other species of this genus that occur in the region.
    Matched MeSH terms: Animal Distribution
  20. Grismer LL, Wood PL, Anuar S, Davis HR, Cobos AJ, Murdoch ML
    Zootaxa, 2016 Jan 04;4061(1):1-17.
    PMID: 27395475 DOI: 10.11646/zootaxa.4061.1.1
    A new species of Bent-toed Gecko, Cyrtodactylus gunungsenyumensis sp. nov. of the sworderi complex, is described from Hutan Lipur Gunung Senyum, Pahang, Peninsular Malaysia and is differentiated from all other species in the sworderi complex by having a unique combination of characters including a maximum SVL of 74.7 mm; low, rounded, weakly keeled, body tubercles; 34-40 paravertebral tubercles; weak ventrolateral body fold lacking tubercles; 38-41 ventral scales; an abrupt transition between the posterior and ventral femoral scales; 20-23 subdigital lamellae on the fourth toe; enlarged femoral scales; no femoral or precloacal pores; no precloacal groove; wide caudal bands; and an evenly banded dorsal pattern. Cyrtodactylus gunungsenyumensis sp. nov. is a scansorial, karst forest-adapted specialist endemic to the karst ecosystem surrounding Gunung Senyum and occurs on the vertical walls of the limestone towers as well as the branches, trunks, and leaves of the vegetation in the associated karst forest. Cyrtodactylus gunungsenyumensis sp. nov. is the seventh species of karst forest-adapted Cyrtodactylus and the sixteenth endemic species of karst ecosystem reptile discovered in Peninsular Malaysia in the last seven years from only 12 different karst forests. This is a clear indication that many species remain to be discovered in the approximately 558 isolated karst ecosystems in Peninsular Malaysia not yet surveyed. These data continue to underscore the importance of karst ecosystems as reservoirs of biodiversity and microendemism and that they constitute an important component of Peninsular Malaysia's natural heritage and should be protected from the quarrying interests of foreign industrial companies.
    Matched MeSH terms: Animal Distribution
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