Benthic foraminifera, single-celled marine organisms, are known for their wide distribution, high abundance and species diversity, test (i.e., shell) preservation in the sedimentary (e.g., historical) record, and sensitivity to environmental changes. Because of these characteristics, they have been widely used as bioindicators in environmental monitoring and, more recently, as Biological Quality Elements (BQEs) in the Ecological Quality Status (EcoQS) evaluation. The global scientific literature on benthic foraminifera as bioindicators was gathered from the Scopus database (overall 966 papers from 1973 to 2022) and explored with scientometric software. The outcomes highlight that the investigation of benthic foraminiferal response to pollutants started over 50 years ago. Indeed, not only the number of published documents has recently peaked (i.e., 2021 and 2022) but there has been also a growth in the percentages of papers falling within the Decision Sciences category that deals with the application of foraminiferal indices for the EcoQS assessment.
The benthic foraminiferal diversity index was computed from Beypore estuary sediments. The abundance and diversity of Quinqueloculina lata, Textularia agglutinans, Haplophagmoides canariensis, and Quinqueloculina stelligera were dominated by stress-tolerant taxa such as Ammonia tepida, A.parkinsoniana, Nonion grateloupi, and N. scaphum in the estuary. The small-size foraminifera probably perished in a juvenile stage because of the high temperature and low salinity that prevailed in the ecosystem. The dominance of stress tolerant benthic foraminifera and absence of Elphidium species in the estuary suggest the prevalence of hypoxic (low-oxygen) conditions. The consistent low-diversity index of foraminifera indicates that the ecosystem is moderate to highly stressed ecologically in the Beypore estuary. The application of benthic foraminifera as a bioindicator for assessing the environmental stress in the Beypore estuary is key in monitoring these fragile coastal ecosystems.
Analisis geokimia menggunakan kaedah ICP-MS menunjukkan taburan geokimia unsur di kawasan kajian dipengaruhi
oleh dua asalan sedimen berbeza iaitu daripada marin dan daratan. Unsur Ca dan Mg dikenal pasti sebagai unsur
marin, manakala unsur Al, Fe, Mn, Na, Cu, Cr, Zn dan Ni dikenal pasti sebagai unsur daratan. Unsur Ca dan Mg dikenal
pasti terhasil daripada proses penyahkapuran rangka dan hidupan marin seperti cengkerang moluska dan foraminifera.
Unsur benua berasal daripada granit dari Gunung Korbu dan Gunung Stong yang disaliri oleh Sungai Nenggiri dan
Sungai Galas, serta batuan argilit arenit yang berasal dari bahagian selatan dan tenggara Negeri Kelantan dari
Gunung Cintawangsa dan Gunung Stong dan disaliri oleh Sungai Lebir dan Sungai Galas. Unsur daripada batuan
induk membebaskan unsur kimia semasa luluhawa kimia dan telah dijerap oleh cas-cas negatif pada permukaan sedimen
halus seperti lempung dan lodak sebelum dimendapkan bersama di dalam kawasan kajian.
A study on distribution and diversity of benthic foraminifera in surface sediments was carried out in Northwestern Sarawak waters, Malaysia. The range of water depth at the study site was between 43 m and 71 m. A total of seven sediment samples were taken for this study. As a result, 11 genera were identified from a total of 1,222 individuals of foraminifera. 200 individuals were picked out from each sample. The 11 genera that were identified from the study site included Heterolepaspp., Textulariaspp., Quinqueloculinaspp.,Operculina spp. Pseudorotaliaspp., Amphisteginaspp., Cylindroclavulinaspp., Elphidiumspp., Ammobaculitesspp., Asterorotaliaspp. and Bolivinaspp.. The common genera found in the sediments of the study areas were Heterolepa, Textularia, Quincoloculina, Operculinaand Pseudorotalia. The highest and lowest values of Fisher alpha and Shannon-Wiener indices were shown at Station C287 and Station B482 respectively. The highest value of Fisher alpha was 3.23 and the lowest value was 1.97. The highest and lowest values of Shannon-Wiener were 2.30 and 1.91. The highest index value of diversity was 3.23 at depth 67.76 m and the lowest value was 1.53 at depth 45.54 m and 68.45 m. From this study, depth is not the main factor that influencesthe diversity of benthic foraminiferal in northwestern Sarawak waters.
Miocene larger benthic foraminifera have been discovered from a limestone unit of the Kalumpang Formation. The limestone is exposed at the Teck Guan Quarry, Tawau, southeast Sabah. The Kalumpang Formation consists predominantly of interbedded mudstone and sandstone (graywacke), conglomerate, limestone, marl, chert and volcanic rocks. Five limestone samples have been collected and processed for petrographic analysis and identification of larger benthic foraminifera. The limestone is classified as packstone and mudstone. A total of seventeen species of larger benthic foraminifera have been identified. The foraminifera are divided into two assemblages namely Assemblage I and Assemblage II. Assemblage I is characterized by the presence of Lepidocyclina (Nephrolepidina) parva, Operculina sp. and Lepidocyclina (Eulepidina) formosa. This assemblage is an indicative of Aquitanian to Burdigalian in age (Early Miocene). Assembalge II comprises of Lepidocyclina (Nephrolepidina) sumatrensis, Lepidocyclina (Nephrolepidina) angulosa, Lepidocyclina (Nephrolepidina) ferreroi Lepidocyclina sp., Miogypsina sp., Katacycloclypeus annulatus, Katacyloclypeus martini, Cycloclypeus carpenteri, Cycloclypeus indopacificus, Cycloclypeus sp., Flosculinella bontangensis, Operculina complanata, Amphistegina bowdenensis and Amphistegina sp. This assemblage is an indicative of Langhian to Serravallian age (Middle Miocene). The foraminiferal assemblages suggest that the depositional environment was a warm tropical shallow-marine at the fore-reef shelf zone.
A single sample from the logged section at eastern side of Gua Panjang limestone hill, southwest of Kampung Kubang
Rasa Village, Merapoh, has yielded 5 very important conodont species. They are Hindeodus parvus erectus, Hindeodus
parvus parvus, Hindeodus latidentatus latidentatus, Hindeodus latidentatus praeparvus, Hindeodus postparvus, Hindeodus
eurypge and Isarcicella staeschi. These Early Triassic conodonts were obtained in a bioclastic dolostone sample, located
2.5 m above bioclastic grainstone which yielded Late Permian foraminifera. The conodonts found were given Conodont
Alteration Index (CAI) scale of 5, consistent with the heating of Main Range granitoid during Indosinian Orogeny.
Limestone harbouring basal Triassic conodonts in Gua Panjang is interpreted to be deposited in an open shallow marine
shelf environment.
The data presented herein were collected from the Straits of Malacca, along the west coast of Peninsular Malaysia. A 3.9 m core sample was retrieved from the Straits of Malacca in 2001. This core was continuously sub-sampled at 5-cm intervals between selected core depths of 220 cm and 380 cm. The 32 sub-samples obtained were analysed to understand the species composition of benthic Foraminifera in them and the changes in lithology during the Holocene. The data available in this article include the raw counts of different species of Foraminifera and the weight percentages of sediment of different grain sizes and organic matter at different depth. In addition, the estimated ages of the sediment samples are also provided. The chronostratigraphic framework of the core was based on radiocarbon-14 Accelerator Mass Spectrometry (AMS) dates estimated from three selected sediment intervals. The results of carbon dating were calibrated to calendar years (cal BC/AD) and calibrated radiocarbon years (cal BP). Calibration was done using the INTCAL program with a Delta R value of -19 ± 70.
Pulau Tioman is a famous tourist island off Peninsular Malaysia with beautiful coral reefs. This study aims to assess the health of the coral reefs surrounding Pulau Tioman based on the application of the Foraminifera in Reef Assessment and Monitoring Index (FI). Ten sampling sites around Pulau Tioman were studied with a total of 30 samples. Eight orders, 41 families, 80 genera, and 161 species of benthic foraminifera were identified. The agglutinated type of foraminifera constituted 2-8% of the total assemblages. Calcareous hyaline and porcelaneous groups represented 79% and 19% of the total assemblages, respectively. Symbiont-bearing taxa were the most common foraminifera. The results indicate that most of the sampling sites are conducive for coral reef growth with good recoverability from future stress to the ecosystem. However, several areas with higher coastal development and tourism have reduced water and sediment quality. Therefore, the limit on the number of visitors and tourists should be revised to enable coral growth and health. The FI values in this study showed a positive correlation with good water qualities and a negative correlation with organic matter enrichment. The FI is a good measure to assess the health of a coral reef and can be applied to other reef ecosystems around Malaysia.
Deforestation precipitates spillover of enzootic, vector-borne viruses into humans, but specific mechanisms for this effect have rarely been investigated. Expansion of oil palm cultivation is a major driver of deforestation. Here, we demonstrate that mosquito abundance decreased over ten stepwise distances from interior forest into conterminous palm plantations in Borneo. Diversity in interior plantation narrowed to one species, Aedes albopictus, a potential bridge vector for spillover of multiple viruses. A. albopictus was equally abundant across all distances in forests, forest-plantation edge, and plantations, while A. niveus, a known vector of sylvatic dengue virus, was found only in forests. A. albopictus collections were significantly female-biased in plantation but not in edge or forest. Our data reveal that the likelihood of encountering any mosquito is greater in interior forest and edge than plantation, while the likelihood of encountering A. albopictus is equivalent across the gradient sampled from interior plantation to interior forest.
The distribution of benthic Foraminifera throughout the coastal waters of Taman Negara Pulau Pinang (Penang National Park), Malaysia was studied to assess the impact of various anthropogenic activities, such as fishing, ecotourism and floating cage culture. Samples were obtained at 200 m intervals within the subtidal zone, extending up to 1200 m offshore at Teluk Bahang, Teluk Aling, Teluk Ketapang and Pantai Acheh. The depth within coastal waters ranged between 1.5 m and 10.0 m, with predominantly muddy substrate at most stations. Water quality analysis showed little variation in micronutrient (nitrite, NO2; nitrate, NO3; ammonia, NH4 and orthophosphate, PO4) concentrations between sampling stations. Temperature (29.6±0.48°C), salinity (29.4±0.28 ppt), dissolved oxygen content (5.4±0.95 mg/l) and pH (8.5± 0.13) also showed little fluctuation between stations. A total of nine genera of foraminifera were identified in the study (i.e., Ammonia, Elphidium, Ammobaculites, Bigenerina, Quinqueloculina, Reopax, Globigerina, Textularia and Nonion). The distribution of benthic foraminifera was dominated by opportunistic groups that have a high tolerance to anthropogenic stressors. Ammonia had the highest frequency of occurrence (84.7%), followed by Bigenerina (50%), Ammobaculites (44.2%) and Elphidium (38.9%). The Ammonia-Elphidium Index (AEI) was used to describe the hypoxic condition of benthic communities at all sites. Teluk Bahang had the highest AEI value. The foraminiferal assemblages and distribution in Teluk Bahang, Teluk Aling, Teluk Ketapang and Pantai Acheh showed no correlation with physical or chemical environmental parameters.
The first time report on the feeding ecology and food preference of mangrove horseshoe crab Carcinoscorpius rotundicauda (Latreille 1802) at their nesting grounds along the Pahang coast is given. Monthly sampling was carried out between March 2010 and February 2011 covering both monsoonal (March to October) and non-monsoonal (November to February) seasons. Major macrobenthic gut contents (bivalves, gastropods, crustaceans, polychaetes and miscellaneous food items including plant materials) were identified using microscopic examination. An electivity index (E1) was calculated for the frequent food items observed in the gut region of C. rotundicauda during monsoon and non-monsoon seasons. The EI was negative for crustaceans and positive for all the other food items including bivalves, gastropods, polychaetes and miscellaneous food items (which include insects, amphipods, Isopods, larval and juvenile stages of fishes, foraminifera and other Annelid worms). It is interesting to note that C. rotundicauda prefered less number of bivalves than polychaetes during non monsoon seasons but it was the reverse during monsoonal period. Male crabs intensely preyed on gastropods and female prefers polychaete worms during the peak mating/nesting season (June - August 2010). Seasonal variations in food composition showed that mollusks formed the main item especially gastropods. Unidentified organic matters in the gut content analysis of C. rotundicauda showed high preference towards plant materials. Gastro Somatic Index (GaSI) analysis showed that the feeding intensity of male crabs was higher during non-monsoon period while it was higher during monsoonal period in female crabs. In conclusion, the feeding ecology of mangrove horseshoe crabs were more similar to its closer and distant conspecifics. However, it was postulated that the higher preference of polychaete worms by the female C. rotundicauda during the peak mating season indicated its role in regulating the nesting behaviour.