Browse publications by year: 2012

  1. Karim Z, Adnan R, Ansari MS
    PLoS One, 2012;7(7):e41422.
    PMID: 22848490 DOI: 10.1371/journal.pone.0041422
    Chemical synthesis of Ag-NPs was carried out using reduction method. The reduction mechanistic approach of silver ions was found to be a basic clue for the formation of the Ag-NPs. The nanoparticles were characterized by UV-vis, FT-IR and TEM analysis. We had designed some experiments in support of our hypothesis, "low concentrations of novel nanoparticles (silver and gold) increases the activity of plant peroxidases and alter their structure also", we had used Ag-NPs and HRP as models. The immobilization/interaction experiment had demonstrated the specific concentration range of the Ag-NPs and within this range, an increase in HRP activity was reported. At 0.08 mM concentration of Ag-NPs, 50% increase in the activity yield was found. The U.V-vis spectra had demonstrated the increase in the absorbance of HRP within the reported concentration range (0.06-0.12 mM). Above and below this concentration range there was a decrease in the activity of HRP. The results that we had found from the fluorescence spectra were also in favor of our hypothesis. There was a maximum increase in ellipticity and α-helix contents in the presence of 0.08 mM concentration of Ag-NPs, demonstrated by circular dichroism (CD) spectra. Finally, incubation of a plant peroxidase, HRP with Ag-NPs, within the reported concentration range not only enhances the activity but also alter the structure.
    MeSH terms: Horseradish Peroxidase/chemistry*; Plant Proteins/chemistry*; Silver/chemistry*; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Protein Structure, Secondary; Armoracia/enzymology*; Metal Nanoparticles/chemistry*
  2. Ku PX, Abu Osman NA, Yusof A, Wan Abas WA
    PLoS One, 2012;7(7):e41539.
    PMID: 22848523 DOI: 10.1371/journal.pone.0041539
    Postural balance is vital for safely carrying out many daily activities, such as locomotion. The purpose of this study was to determine how changes in normal standing (NS) and standing with toe-extension (SWT) impact postural control during quiet standing. Furthermore, the research aimed to examine the extent to which the effect of these factors differed between genders.
    MeSH terms: Adult; Postural Balance/physiology*; Female; Humans; Male; Posture/physiology*; Toes*
  3. Lai CW, Sreekantan S
    J Nanosci Nanotechnol, 2012 Apr;12(4):3170-4.
    PMID: 22849082
    Well aligned TiO2 nanotubes were successfully synthesized by anodization of Ti foil at 60 V in a fluorinated bath comprised of ethylene glycol with 5 wt% of NH4F and 5 wt% of H2O2. In order to enhance the visible light absorption and photoelectrochemical response of pure TiO2 nanotube arrays, a mixed oxide system (W-TiO2) was investigated. W-TiO2 nanotube arrays were prepared using radio-frequency (RF) sputtering to incorporate the W into the lattice of TiO2 nanotube arrays. The W atoms occupy the substitutional position within the vacancies of TiO2 nanotube arrays. The as-anodized TiO2 is amorphous in nature while the annealed TiO2 is anatase phase. The mixed oxide (W-TiO2) system in suitable TiO2 phase plays important roles in efficient electron transfers due to the reduction in electron-hole recombination. In this article, the effect of the sputtered W into the as-anodized/annealed TiO2 nanotube arrays on the photoelectrochemical response was presented.
    MeSH terms: Baths; Electrons; Hydrogen Peroxide; Light; Oxides; Recombination, Genetic; Titanium; Ethylene Glycol; Nanotubes
  4. Ng KH, Lean ML
    Health Phys, 2012 Sep;103(3):307-10.
    PMID: 22850236 DOI: 10.1097/HP.0b013e318257cfcb
    The potential of social media has expanded far beyond the initial function of social communication among a network of friends. It has become an increasingly important tool in risk communication to allow the dissemination of timely and accurate information to global citizens to make more informed choices regarding a particular crisis. The Fukushima nuclear crisis is an example where the potential of social media was not fully tapped. This caused undue stress and distrust of authorities. While the use of social media in this crisis could have altered significantly the level of trust in authorities and others, two additional points should be considered. One point is the use of plain language versus scientific language in order to reach a wider audience. The other is an urgent need to improve public information especially in the event of a nuclear emergency and to enhance educational efforts and action by improving radiological protection communication from regulatory bodies and international agencies. These are points that also play a large role in the use of social media.
    MeSH terms: Communication*; Disasters*; Japan; Risk; Radioactive Hazard Release*; Social Media*
  5. Othman R, Omar MH, Shan LP, Shafiee MN, Jamal R, Mokhtar NM
    Reprod Biol, 2012 Jul;12(2):183-99.
    PMID: 22850470
    The aim of the present study was to identify differentially expressed genes and their related biological pathways in the secretory phase endometrium from patients with recurrent miscarriage (RM) and fertile subjects. Endometrial samples from RM and fertile patients were analyzed using the Affymetrix GeneChip® ST Array. The bioinformatic analysis using the Partek Genomic Suite revealed 346 genes (175 up-regulated and 171 down-regulated) that were differentially expressed in the endometrium of RM patients compared to the fertile subjects (fold change ≥1.5, p<0.005). Validation step using quantitative real-time polymerase chain reaction (qPCR) confirmed a similar expression pattern of four exemplary genes: one up-regulated gene (fibroblast growth factor 9, FGF9) and three down-regulated genes: integrin β3 (ITGB3), colony stimulating factor 1 (CSF1) and matrix-metalloproteinases 19 (MMP19). The Gene Set Enrichment Analysis (GSEA) and the Pathway Studio software have found 101 signaling pathways (p<0.05) associated with the affected genes including the FGFR3 /signal transducer and activator of transcription (STAT) pathway and the CSF1R/STAT pathway. Cell adhesion, cell differentiation and angiogenesis were among biological processes indicated by this system. In conclusion, microarray technique is a useful tool to study gene expression in the secretory phase-endometrium of RM patients. The differences in endometrial gene expressions between healthy and RM subjects contribute to an increase in our knowledge on molecular mechanisms of RM development and may improve the outcome of pregnancies in high-risk women with RM.
    MeSH terms: Abortion, Habitual/metabolism*; Endometrium/metabolism*; Female; Gene Expression Regulation/genetics; Gene Expression Regulation/physiology*; Humans; Luteal Phase/genetics; Luteal Phase/metabolism*; Malaysia; Pregnancy; Signal Transduction/genetics*; Macrophage Colony-Stimulating Factor/metabolism; Computational Biology; Principal Component Analysis; Integrin beta3/metabolism; Protein Array Analysis; Matrix Metalloproteinases, Secreted/metabolism; Real-Time Polymerase Chain Reaction
  6. Abdulghani M, Hussin AH, Sulaiman SA, Chan KL
    Reprod Biol, 2012 Jul;12(2):247-55.
    PMID: 22850474 DOI: 10.1016/s1642-431x(12)60089-8
    The objective of this research was to study the ameliorative effects of a standardized quassinoid-rich extract (TAF 273) of Eurycoma longifolia root on some reproductive disorders in female rats. An irregular estrous cycle and ovarian cystic follicles were induced in 21-day-old females by the daily administration of testosterone (10 mg/kg, sc) for three weeks. The hormone-treated rats exhibited persistent diestrous as well as ovaries containing cystic follicles. Upon treatment with TAF 273, fewer animals showed irregular estrous cycles and there was less follicular morphological damage. The reversal effect may be derived from the anti-estrogenic properties of the plant quassinoids.
    MeSH terms: Amenorrhea/chemically induced; Amenorrhea/drug therapy*; Analysis of Variance; Animals; Female; Phytotherapy/methods*; Plant Extracts/pharmacology*; Polycystic Ovary Syndrome/chemically induced; Polycystic Ovary Syndrome/drug therapy*; Testosterone/toxicity*; Treatment Outcome; Rats, Sprague-Dawley; Plant Roots/chemistry; Eurycoma/chemistry*; Quassins/pharmacology*; Quassins/therapeutic use; Rats
  7. Lai CW, Sreekantan S, Lockman Z
    J Nanosci Nanotechnol, 2012 May;12(5):4057-66.
    PMID: 22852347
    Uniformly sized TiO2 nanotubes with high aspect ratios were synthesised on a large substrate (100 mm x 100 mm) via the bubbling system through anodisation of Ti in ethylene glycol containing 5 wt% NH4F and 5 wt% H2O2. The benefits of bubbling system in producing uniformly sized TiO2 nanotubes throughout the Ti foil are illustrated. Moreover, the effects of applied voltage and fluoride content on the resulting nanotubes were also considered. Such uniform sized TiO2 nanotubes are a key to produce hydrogen efficiently using PEC cell. The results show higher photocurrent responses for the high aspect ratio, uniform TiO2 nanotubes because of excellent interfacial electron transfer.
    MeSH terms: Electron Transport; Electrons; Fluorides; Hydrogen; Hydrogen Peroxide; Phosphates; Titanium; Ethylene Glycol; Nanotubes
  8. Abdulhadi LM
    Eur J Prosthodont Restor Dent, 2012 Jun;20(2):81-5.
    PMID: 22852525
    A 72-year-old man was referred from the surgery department for rehabilitation following surgical resection of Basaloid carcinoma. The first surgical intervention involved the anterior palatal region and was restored with a simple obturator. Two years later further surgery was undertaken to excise a recurrent tumor in the nose and part of the cheek. This resulted in an exposed nasal cavity and maxillary sinus. In addition, there was a small oral aperture composed of thin tissue that stretched to its maximum due to scar formation. The defect was restored with a full thickness skin flap but it subsequently broke down leaving the midface exposed with limited mouth opening due to tissue contraction and scar formation after the flap operation. The defect was rehabilitated with Co-Cr obturator intraorally and a silicone nose retained to the naso-palatal extension of the obturator by a magnet extraorally. This resulted in practically good retention, placement, and adaptation of the two parts of the prosthesis.
    MeSH terms: Aged; Carcinoma, Squamous Cell/complications; Carcinoma, Squamous Cell/rehabilitation*; Humans; Male; Maxillary Sinus Neoplasms/complications; Maxillary Sinus Neoplasms/rehabilitation; Maxillofacial Prosthesis*; Microstomia/etiology*; Neoplasm Recurrence, Local; Nose Neoplasms/complications; Nose Neoplasms/rehabilitation; Palatal Neoplasms/complications; Palatal Neoplasms/rehabilitation; Palatal Obturators*; Prosthesis Design*; Reoperation; Magnets*; Prosthesis Retention/instrumentation*
  9. Jamal MH, Ch'ng WC, Yusoff K, Shafee N
    Cancer Cell Int, 2012 Aug 01;12(1):35.
    PMID: 22853623 DOI: 10.1186/1475-2867-12-35
    BACKGROUND: Cisplatin resistance is a serious problem in cancer treatment. To overcome it, alternative approaches including virotherapy are being pursued. One of the candidates for anticancer virotherapy is the Newcastle disease virus (NDV). Even though NDV's oncolytic properties in various cancer cells have been widely reported, information regarding its effects on cisplatin resistant cancer cells is still limited. Therefore, we tested the oncolytic efficacy of a strain of NDV, designated as AF2240, in a cisplatin-resistant breast cancer cell line.

    METHODS: Cisplatin-resistant cell line (MCF7-CR) was developed from the MCF7 human breast adenocarcinoma cell line by performing a seven-cyclic exposure to cisplatin. Following NDV infection, fluorescence-activated cell sorting (FACS) analysis and immunoblotting were used to measure cell viability and viral protein expression, respectively. Production of virus progeny was then assessed by using the plaque assay technique.

    RESULTS: Infection of a mass population of the MCF7-CR with NDV resulted in 50% killing in the first 12 hours post-infection (hpi), comparable to the parental MCF7. From 12 hpi onwards, the remaining MCF7-CR became less susceptible to NDV killing. This reduced susceptibility led to increased viral protein synthesis and virus progeny production. The reduction was also associated with a prolonged cell survival via stabilization of the survivin protein.

    CONCLUSIONS: Our findings showed for the first time, the involvement of survivin in the reduction of NDV-induced oncolysis in a subpopulation of cisplatin-resistant cells. This information will be important towards improving the efficacy of NDV as an anticancer agent in drug resistant cancers.

  10. Atroosh WM, Al-Mekhlafi HM, Mahdy MA, Surin J
    Malar J, 2012;11:251.
    PMID: 22853645 DOI: 10.1186/1475-2875-11-251
    Malaria is still a public health problem in Malaysia with chloroquine (CQ) being the first-line drug in the treatment policy of uncomplicated malaria. There is a scarcity in information about the magnitude of Plasmodium falciparum CQ resistance. This study aims to investigate the presence of single point mutations in the P. falciparum chloroquine-resistance transporter gene (pfcrt) at codons 76, 271, 326, 356 and 371 and in P. falciparum multi-drug resistance-1 gene (pfmdr1) at codons 86 and 1246, as molecular markers of CQ resistance.
    MeSH terms: Adult; Antimalarials/pharmacology*; Chloroquine/pharmacology*; Drug Resistance*; Female; Humans; Malaysia; Male; Plasmodium falciparum/drug effects*; Plasmodium falciparum/genetics; Plasmodium falciparum/isolation & purification; Polymorphism, Restriction Fragment Length; Protozoan Proteins/genetics*; DNA, Protozoan/genetics; Polymerase Chain Reaction; Malaria, Falciparum/parasitology; Point Mutation*; Membrane Transport Proteins/genetics*; Multidrug Resistance-Associated Proteins/genetics*
  11. Baharom N, Hassan MR, Ali N, Shah SA
    PMID: 22853701 DOI: 10.1186/1747-597X-7-32
    BACKGROUND: Methadone Maintenance Therapy (MMT) is one of the popular choices for drug substitution therapy and is fairly new in Malaysia. Aside from its role in harm reduction against HIV infection, MMT programme may potentially enhances clients' quality of life. This study aims to identify the impact of MMT programme on clients' quality of life after 6 months in treatment and to explore factors that may be associated with changes in their quality of life.
    METHODS: In this retrospective report review, 122 subjects from 2 government MMT clinics were selected from the district of Tampin, Negeri Sembilan, Malaysia. The raw score from the WHO Quality of Life questionnaire (WHOQOL-BREF), at baseline and 6 months after therapy were collected and converted to 0-100 scale form to give quality of life scores for four domains; physical, psychological, social relationships and environment. Other variables of interest were socio-demography, age when joining MMT programme, age and duration of illicit drug use, HIV and Hepatitis C status, and the Opiate Treatment Index (OTI) score on drug use, sexual and social aspect at the baseline. Statistical analysis used the SPSS version 16.
    RESULTS: There was significant improvement in all four domains of quality of life, after 6 months of MMT. The largest improvement was for psychological domain (mean score difference 15.54 ± 20.81). Multivariable linear regression analysis showed that, for the physical domain, there was no significant predictor. For both the psychological and social domains, having tertiary education is a significant predictor for improvement in both aspects of quality of life. Negative HIV status is associated with improvement for the environment domain.
    CONCLUSIONS: There was a significant short term improvement in the quality of life of MMT clients who stayed in the programme for at least 6 months in the district of Tampin, Negeri Sembilan, Malaysia.
    Study site: MMT clinic, Tampin, Negeri Sembilan, Malaysia.
    MeSH terms: Adult; Ambulatory Care Facilities; Female; Humans; Malaysia; Malaysia/epidemiology; Male; Methadone/therapeutic use*; Middle Aged; Narcotics/therapeutic use*; Surveys and Questionnaires; Retrospective Studies; Substance Abuse Treatment Centers; Substance-Related Disorders/drug therapy*; Substance-Related Disorders/epidemiology; Young Adult; Opiate Substitution Treatment*
  12. Beck J, Holloway JD, Khen CV, Kitching IJ
    Am Nat, 2012 Sep;180(3):E64-74.
    PMID: 22854086 DOI: 10.1086/666982
    Tropical beta diversity, and particularly that of herbivorous insects in rainforests, is often considered to be enormous, but this notion has recently been challenged. Because tropical beta diversity is highly relevant to our view on biodiversity, it is important to gain more insights and to resolve methodological problems that may lead to contradictions in different studies. We used data on two ecologically distinct moth families from Southeast Asia and analyzed separately the contribution of beta components to overall species richness at three spatial scales. Observed diversity partitions were compared under different types of null models. We found that alpha diversity was lower than expected on the basis of null models, whereas hierarchical beta components were larger than expected. Beta components played a significant role in shaping gamma diversity, and their contribution can be high (multiplicative beta >5). We found a reduction in beta components when comparing primary forests to agricultural sites (cf. "biotic homogenization"), but even in these habitats, beta components were still substantial. Our analyses show that beta components do play an important role in our data on tropical herbivorous insects and that these results are not attributable to lumping different habitats when sampling environmental gradients.
    MeSH terms: Animals; Borneo; Malaysia; Moths*; Tropical Climate; Biodiversity*
  13. Taib F, Mohamad N, Mohamed Daud MA, Hassan A, Singh MS, Nasir A
    Urology, 2012 Oct;80(4):931-3.
    PMID: 22854139 DOI: 10.1016/j.urology.2012.05.021
    Fibrosarcoma is rare in the pediatric age group. It generally involves the extremities and the trunk but rarely involves the genital area. We report a case of a large fungating infantile fibrosarcoma of the penis in a 2-year-old Malay boy. Partial recovery of the penile structure was achieved after chemotherapy. The difficulty in managing the social and surgical aspect of this case is discussed in our report. To the best of our knowledge, this is the first case report of infantile fibrosarcoma involving the penis in an Asian region.
    MeSH terms: Antineoplastic Combined Chemotherapy Protocols/therapeutic use*; Child, Preschool; Cyclophosphamide/administration & dosage; Doxorubicin/administration & dosage; Fibrosarcoma/diagnosis; Fibrosarcoma/drug therapy*; Humans; Male; Penile Neoplasms/diagnosis; Penile Neoplasms/drug therapy*; Vincristine/administration & dosage; Treatment Refusal
  14. Yeoh KA, Othman A, Meon S, Abdullah F, Ho CL
    J Plant Physiol, 2012 Oct 15;169(15):1565-70.
    PMID: 22854183 DOI: 10.1016/j.jplph.2012.07.006
    Glucanases are enzymes that hydrolyze a variety β-d-glucosidic linkages. Plant β-1,3-glucanases are able to degrade fungal cell walls; and promote the release of cell-wall derived fungal elicitors. In this study, three full-length cDNA sequences encoding oil palm (Elaeis guineensis) glucanases were analyzed. Sequence analyses of the cDNA sequences suggested that EgGlc1-1 is a putative β-d-glucan exohydolase belonging to glycosyl hydrolase (GH) family 3 while EgGlc5-1 and EgGlc5-2 are putative glucan endo-1,3-β-glucosidases belonging to GH family 17. The transcript abundance of these genes in the roots and leaves of oil palm seedlings treated with Ganoderma boninense and Trichoderma harzianum was profiled to investigate the involvement of these glucanases in oil palm during fungal infection. The gene expression of EgGlc1-1 in the root of oil palm seedlings was increased by T. harzianum but suppressed by G. boninense; while the gene expression of both EgGlc5-1 and EgGlc5-2 in the roots of oil palm seedlings was suppressed by G. boninense or/and T. harzianum.
    MeSH terms: Cellulase/genetics*; Cellulase/chemistry; Glucan Endo-1,3-beta-D-Glucosidase/metabolism; Plant Diseases/immunology*; Trichoderma/pathogenicity*; Sequence Analysis, DNA; Gene Expression Regulation, Plant; Plant Leaves/genetics; Plant Roots/genetics; Arecaceae/genetics*; Arecaceae/microbiology*; Ganoderma/pathogenicity*; Seedlings/genetics; Cellulases/metabolism; Plant Immunity/genetics*
  15. Ariffin N, Hasan H, Ramli N, Ibrahim NR, Taib F, Rahman AA, et al.
    Am J Infect Control, 2012 Aug;40(6):572-5.
    PMID: 22854380 DOI: 10.1016/j.ajic.2012.02.032
    Intrahospital variations in antimicrobial profiles may be related to many factors. This study compared causative agents of nosocomial bloodstream infections between a neonatal intensive care unit (NICU) that adopted a ward-tailored antibiotic policy and adult intensive care units (ICUs). Data on organisms from blood cultures obtained from the respective wards between 2005 and 2009 were analyzed. Compared with the adult ICUs, the NICU had a higher frequency of Enterobacteriacae and lower frequencies of typical hospital-acquired pathogens (eg, Klebsiella pneumoniae, 17.4% vs 10.0% [P < .001]; Acinetobacter baumannii, 3.9% vs 11.6% [P < .001]). Antibiotic resistance of gram-negative organisms was also significantly lower in the NICU, including resistance to imipenem (5.7% vs 32.1%; P < .001), amikacin (8.8% vs 30.3%), and ceftriaxone (36.1% vs 74.6%; P < .001). This could possibly be due to the ward-tailored antibiotic policy adopted by the NICU but not by the other ICUs.
    MeSH terms: Adult; Anti-Bacterial Agents/pharmacology; Bacteria/classification; Bacteria/drug effects*; Bacteria/isolation & purification; Cross Infection/microbiology*; Cross Infection/epidemiology; Hospitals, Teaching; Humans; Infant; Intensive Care Units; Prevalence; Bacteremia/microbiology*; Bacteremia/epidemiology; Drug Resistance, Bacterial*
  16. Hasan DB, Abdul Aziz AR, Daud WM
    Environ Technol, 2012 Jun;33(10-12):1111-21.
    PMID: 22856280
    The mineralisation of remazol black B (RBB) was studied at concentrations ranging from 20-1000 mgL(-1). The work was aimed at investigating the Fenton-like peroxidation of RBB at a concentration typically obtained in Batik cottage industries. Other response parameters were degradation and colour removal efficiencies. The parameters that were measured included total organic carbon (TOC), chemical oxygen demand (COD) as well as absorbance for mineralisation, degradation and colour. To optimise the process, the interaction effects of several controlling variables on the treatment process were examined using dispersion matrix-optimal design and response surface analysis. Four specific variables: initial dye concentration (Dye)o; the molar ratio of oxidant to dye organic strength (H2O2):(COD); the mass ratio of the oxidant to the catalyst (H2O2):(Fe3+) and reaction time (t(r)), were observed. Three reduced empirical models, one for each response, were developed for describing the treatment process. For 20, 510 and 1000 mgL(-1), the optimum %TOC reduction and oxidation times were 44% for 95 min, 52% for 52.5 min and 68% for 10 min corresponding to 67, 81 and 75% COD reduction, respectively. The optimum COD reduction and oxidation times were 89% for 95 min, 91% for 10 min and 84% for 95 min for concentrations of 20, 510 and 1000 mg L(-1), respectively. For all concentrations, total colour removal was achieved. A comparison of the results obtained in this study with literature values for traditional Fenton, photo-Fenton and photo-Fenton-like oxidation indicated that the TOC reduction obtained using the Fenton-like process was satisfactory.
    MeSH terms: Hydrogen Peroxide/chemistry*; Iron/chemistry*; Models, Chemical*; Naphthalenesulfonates/chemistry*; Oxidation-Reduction; Biological Oxygen Demand Analysis
  17. Abdollahi Y, Abdullah AH, Gaya UI, Zainal Z, Yusof NA
    Environ Technol, 2012 Jun;33(10-12):1183-9.
    PMID: 22856288
    The effective removal of o-cresol is currently both an environmental and economic challenge. ZnO is not only an efficient photocatalyst but is also cost effective, as its photoabsorption can extend from the ultraviolet (UV) to the visible range thereby allowing the use of inexpensive visible light sources, such as sunlight. The principal objective of the present work is to investigate the visible light-driven removal of o-cresol from aqueous solution in the presence of 1.0 wt% Mn-doped ZnO. To measure the efficiency ofphotodegradation, the variables studied included the amount ofphotocatalyst, concentration of o-cresol, pH and irradiation time. The concentration ofo-cresol and residual organic carbon was monitored using a UV-visible spectrophotometer, ultra high-pressure liquid chromatography and a total organic carbon analyser. The optimum conditions under which the photodegradation of o-cresol was most favourable corresponded to 1.5 g/l ZnO, 35 ppm o-cresol and pH 9. The ZnO-1 wt% Mn photoprocess has demonstrated reusability for more than three times, which warrants its scale-up from laboratory- to in industrial-scale application.
    MeSH terms: Cresols/radiation effects; Cresols/chemistry*; Hydrogen-Ion Concentration; Manganese/chemistry; Photolysis*; Water Pollutants, Chemical/radiation effects; Water Pollutants, Chemical/chemistry*; Zinc Oxide/chemistry
  18. Chai YY, Kahar UM, Md Salleh M, Md Illias R, Goh KM
    Environ Technol, 2012 Jun;33(10-12):1231-8.
    PMID: 22856294
    Two thermophilic bacteria (SK3-4 and DT3-1) were isolated from the Sungai Klah (SK) and Dusun Tua (DT) hot springs in Malaysia. The cells from both strains were rod-shaped, stained Gram positive and formed endospores. The optimal growth of both strains was observed at 55 degrees C and pH 7. Strain DT3-1 exhibited a higher tolerance to chloramphenicol (100 microg ml(-1)) but showed a lower tolerance to sodium chloride (2%, w/v) compared to strain SK3-4. Phylogenetic analysis based on 16S rRNA gene sequences revealed that both strains belong to the genus Anoxybacillus. High concentrations of 15:0 iso in the fatty acid profiles support the conclusion that both strains belong to the genus Anoxybacillus and exhibit unique fatty acid compositions and percentages compared to other Anoxybacillus species. The DNA G + C contents were 42.0 mol% and 41.8 mol% for strains SK3-4 and DT3-1, respectively. Strains SK3-4 and DT3-1 were able to degrade pullulan and to produce maltotriose and glucose, respectively, as their main end products. Based on phenotypic and chemotaxonomic characteristics, 16S rRNA gene sequences, and the DNA G + C content, we propose that strains SK3-4 and DT3-1 are new pullulan-degrading Anoxybacillus strains.
    MeSH terms: Base Composition; Fatty Acids/analysis; Glucans/metabolism*; Malaysia; Genes, rRNA; Hot Springs/microbiology*; Anoxybacillus/isolation & purification*; Anoxybacillus/metabolism*; Anoxybacillus/ultrastructure; Anoxybacillus/chemistry
  19. Shah AH, Saleha AA, Murugaiyah M, Zunita Z, Memon AA
    J Food Prot, 2012 Aug;75(8):1474-8.
    PMID: 22856572 DOI: 10.4315/0362-028X.JFP-11-487
    A total of 106 beef samples which consisted of local (n = 59) and imported (n = 47) beef and 180 milk samples from cows (n = 86) and goats (n = 94) were collected from Selangor, Malaysia. Overall, 30.2% (32 of 106) of beef samples were found positive for Arcobacter species. Imported beef was significantly more contaminated (46.80%) than local beef (16.9%). Arcobacter butzleri was the species isolated most frequently from imported (81.8%) and local (60%) beef, followed by Arcobacter cryaerophilus in local (33.3%) and imported (18.2%) beef samples. Only one local beef sample (10%) yielded Arcobacter skirrowii. Arcobacter species were detected from cow's milk (5.8%), with A. butzleri as the dominant species (60%), followed by A. cryaerophilus (40%), whereas none of the goat's milk samples were found positive for Arcobacter. This is the first report of the detection of Arcobacter in milk and beef in Malaysia.
    MeSH terms: Animals; Cattle; Consumer Product Safety; Food Contamination/analysis*; Food Microbiology; Goats; Humans; Malaysia; Meat/microbiology*; Milk/microbiology*; Species Specificity; Colony Count, Microbial; Prevalence; Arcobacter/isolation & purification*
  20. Hui YW, Dykes GA
    J Food Prot, 2012 Aug;75(8):1507-11.
    PMID: 22856578 DOI: 10.4315/0362-028X.JFP-12-062
    The use of simple crude water extracts of common herbs to reduce bacterial attachment may be a cost-effective way to control bacterial foodborne pathogens, particularly in developing countries. The ability of water extracts of three common Malaysian herbs (Andrographis paniculata, Eurycoma longifolia, and Garcinia atroviridis) to modulate hydrophobicity and attachment to surfaces of five food-related bacterial strains (Bacillus cereus ATCC 14576, Escherichia coli ATCC 25922, Pseudomonas aeruginosa ATCC 10145, Salmonella Enteritidis ATCC 13076, Staphylococcus aureus ATCC 25923) were determined. The bacterial attachment to hydrocarbon assay was used to determine bacterial hydrophobicity. Staining and direct microscopic counts were used to determine attachment of bacteria to glass and stainless steel. Plating on selective media was used to determine attachment of bacteria to shrimp. All extracts were capable of either significantly ( P < 0.05) increasing or decreasing bacterial surface hydrophobicity, depending on the herb extract and bacteria combination. Bacterial attachment to all surfaces was either significantly (P < 0.05) increased or decreased, depending on the herb extract and bacteria combination. Overall, hydrophobicity did not show a significant correlation (P > 0.05) to bacterial attachment. For specific combinations of bacteria, surface material, and plant extract, significant correlations (R > 0.80) between hydrophobicity and attachment were observed. The highest of these was observed for S. aureus attachment to stainless steel and glass after treatment with the E. longifolia extract (R = 0.99, P < 0.01). The crude water herb extracts in this study were shown to have the potential to modulate specific bacterial and surface interactions and may, with further work, be useful for the simple and practical control of foodborne pathogens.
    MeSH terms: Animals; Bacterial Adhesion/drug effects*; Escherichia coli/physiology; Food Microbiology; Glass; Humans; Plant Extracts/pharmacology*; Pseudomonas aeruginosa/physiology; Salmonella enteritidis/physiology; Shellfish/microbiology*; Stainless Steel; Staphylococcus aureus/physiology; Surface Properties; Penaeidae/microbiology*; Hydrophobic and Hydrophilic Interactions/drug effects*
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