Displaying publications 1 - 20 of 84 in total

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  1. Fulltext Climate regulation of fire emissions and deforestation in equatorial Asia
    van der Werf GR, Dempewolf J, Trigg SN, Randerson JT, Kasibhatla PS, Giglio L, et al.
    Proc Natl Acad Sci U S A, 2008 Dec 23;105(51):20350-5.
    PMID: 19075224 DOI: 10.1073/pnas.0803375105
    Drainage of peatlands and deforestation have led to large-scale fires in equatorial Asia, affecting regional air quality and global concentrations of greenhouse gases. Here we used several sources of satellite data with biogeochemical and atmospheric modeling to better understand and constrain fire emissions from Indonesia, Malaysia, and Papua New Guinea during 2000-2006. We found that average fire emissions from this region [128 +/- 51 (1sigma) Tg carbon (C) year(-1), T = 10(12)] were comparable to fossil fuel emissions. In Borneo, carbon emissions from fires were highly variable, fluxes during the moderate 2006 El Niño more than 30 times greater than those during the 2000 La Niña (and with a 2000-2006 mean of 74 +/- 33 Tg C yr(-1)). Higher rates of forest loss and larger areas of peatland becoming vulnerable to fire in drought years caused a strong nonlinear relation between drought and fire emissions in southern Borneo. Fire emissions from Sumatra showed a positive linear trend, increasing at a rate of 8 Tg C year(-2) (approximately doubling during 2000-2006). These results highlight the importance of including deforestation in future climate agreements. They also imply that land manager responses to expected shifts in tropical precipitation may critically determine the strength of climate-carbon cycle feedbacks during the 21st century.
    Matched MeSH terms: Droughts
  2. Characterization of promoter of EgPAL1, a novel PAL gene from the oil palm Elaeis guineensis Jacq
    Yusuf CYL, Abdullah JO, Shaharuddin NA, Abu Seman I, Abdullah MP
    Plant Cell Rep, 2018 Feb;37(2):265-278.
    PMID: 29090330 DOI: 10.1007/s00299-017-2228-7
    KEY MESSAGE: The oil palm EgPAL1 gene promoter and its regulatory region were functional as a promoter in the heterologous system of Arabidopsis according to the cis-acting elements present in that region. The promoter was developmentally regulated, vascular tissue specific and responsive to water stress agents. Phenylalanine ammonia lyase (PAL, EC 4.3.1.24) is the key enzyme of the phenylpropanoid pathway which plays important roles in plant development and adaptation. To date, there is no report on the study of PAL from oil palm (Elaeis guineensis), an economically important oil crop. In this study, the 5' regulatory sequence of a highly divergent oil palm PAL gene (EgPAL1) was isolated and fused with GUS in Arabidopsis to create two transgenic plants carrying the minimal promoter with (2302 bp) and without its regulatory elements (139 bp). The regulatory sequence contained cis-acting elements known to be important for plant development and stress response including the AC-II element for lignin biosynthesis and several stress responsive elements. The promoter and its regulatory region were fully functional in Arabidopsis. Its activities were characterised by two common fundamental features of PAL which are responsive to plant internal developmental programme and external factors. The promoter was developmentally regulated in certain organs; highly active in young organs but less active or inactive in mature organs. The presence of the AC elements and global activity of the EgPAL1 promoter in all organs resembled the property of lignin-related genes. The existence of the MBS element and enhancement of the promoter activity by PEG reflected the behaviour of drought-responsive genes. Our findings provide a platform for evaluating oil palm gene promoters in the heterologous system of Arabidopsis and give insights into the activities of EgPAL1 promoter in oil palm.
    Matched MeSH terms: Droughts
  3. Unravelling proximate cues of mass flowering in the tropical forests of South-East Asia from gene expression analyses
    Yeoh SH, Satake A, Numata S, Ichie T, Lee SL, Basherudin N, et al.
    Mol Ecol, 2017 Oct;26(19):5074-5085.
    PMID: 28749031 DOI: 10.1111/mec.14257
    Elucidating the physiological mechanisms of the irregular yet concerted flowering rhythm of mass flowering tree species in the tropics requires long-term monitoring of flowering phenology, exogenous and endogenous environmental factors, as well as identifying interactions and dependencies among these factors. To investigate the proximate factors for floral initiation of mast seeding trees in the tropics, we monitored the expression dynamics of two key flowering genes, meteorological conditions and endogenous resources over two flowering events of Shorea curtisii and Shorea leprosula in the Malay Peninsula. Comparisons of expression dynamics of genes studied indicated functional conservation of FLOWERING LOCUS T (FT) and LEAFY (LFY) in Shorea. The genes were highly expressed at least 1 month before anthesis for both species. A mathematical model considering the synergistic effect of cool temperature and drought on activation of the flowering gene was successful in predicting the observed gene expression patterns. Requirement of both cool temperature and drought for floral transition suggested by the model implies that flowering phenologies of these species are sensitive to climate change. Our molecular phenology approach in the tropics sheds light on the conserved role of flowering genes in plants inhabiting different climate zones and can be widely applied to dissect the flowering processes in other plant species.
    Matched MeSH terms: Droughts
  4. EgRBP42 encoding an hnRNP-like RNA-binding protein from Elaeis guineensis Jacq. is responsive to abiotic stresses
    Yeap WC, Ooi TE, Namasivayam P, Kulaveerasingam H, Ho CL
    Plant Cell Rep, 2012 Oct;31(10):1829-43.
    PMID: 22699852 DOI: 10.1007/s00299-012-1297-x
    RNA-binding proteins (RBPs) have been implicated as regulatory proteins involved in the post-transcriptional processes of gene expression in plants under various stress conditions. In this study, we report the cloning and characterization of a gene, designated as EgRBP42, encoding a member of the plant heterogeneous nuclear ribonucleoprotein (hnRNP)-like RBP family from oil palm (Elaeis guineensis Jacq.). EgRBP42 consists of two N-terminal RNA recognition motifs and a glycine-rich domain at the C-terminus. The upstream region of EgRBP42 has multiple light-responsive, stress-responsive regulatory elements and regulatory elements associated with flower development. Real-time RT-PCR analysis of EgRBP42 showed that EgRBP42 was expressed in oil palm tissues tested, including leaf, shoot apical meristem, root, female inflorescence, male inflorescence and mesocarp with the lowest transcript level in the roots. EgRBP42 protein interacted with transcripts associated with transcription, translation and stress responses using pull-down assay and electrophoretic mobility shift assay. The accumulation of EgRBP42 and its interacting transcripts were induced by abiotic stresses, including salinity, drought, submergence, cold and heat stresses in leaf discs. Collectively, the data suggested that EgRBP42 is a RBP, which responds to various abiotic stresses and could be advantageous for oil palm under stress conditions. Key message EgRBP42 may be involved in the post-transcriptional regulation of stress-related genes important for plant stress response and adaptation.
    Matched MeSH terms: Droughts
  5. Fulltext Forecasting standardized precipitation index using data intelligence models: regional investigation of Bangladesh
    Yaseen ZM, Ali M, Sharafati A, Al-Ansari N, Shahid S
    Sci Rep, 2021 Feb 09;11(1):3435.
    PMID: 33564055 DOI: 10.1038/s41598-021-82977-9
    A noticeable increase in drought frequency and severity has been observed across the globe due to climate change, which attracted scientists in development of drought prediction models for mitigation of impacts. Droughts are usually monitored using drought indices (DIs), most of which are probabilistic and therefore, highly stochastic and non-linear. The current research investigated the capability of different versions of relatively well-explored machine learning (ML) models including random forest (RF), minimum probability machine regression (MPMR), M5 Tree (M5tree), extreme learning machine (ELM) and online sequential-ELM (OSELM) in predicting the most widely used DI known as standardized precipitation index (SPI) at multiple month horizons (i.e., 1, 3, 6 and 12). Models were developed using monthly rainfall data for the period of 1949-2013 at four meteorological stations namely, Barisal, Bogra, Faridpur and Mymensingh, each representing a geographical region of Bangladesh which frequently experiences droughts. The model inputs were decided based on correlation statistics and the prediction capability was evaluated using several statistical metrics including mean square error (MSE), root mean square error (RMSE), mean absolute error (MAE), correlation coefficient (R), Willmott's Index of agreement (WI), Nash Sutcliffe efficiency (NSE), and Legates and McCabe Index (LM). The results revealed that the proposed models are reliable and robust in predicting droughts in the region. Comparison of the models revealed ELM as the best model in forecasting droughts with minimal RMSE in the range of 0.07-0.85, 0.08-0.76, 0.062-0.80 and 0.042-0.605 for Barisal, Bogra, Faridpur and Mymensingh, respectively for all the SPI scales except one-month SPI for which the RF showed the best performance with minimal RMSE of 0.57, 0.45, 0.59 and 0.42, respectively.
    Matched MeSH terms: Droughts
  6. An evaluation framework for quantifying vegetation loss and recovery in response to meteorological drought based on SPEI and NDVI
    Wu C, Zhong L, Yeh PJ, Gong Z, Lv W, Chen B, et al.
    Sci Total Environ, 2024 Jan 01;906:167632.
    PMID: 37806579 DOI: 10.1016/j.scitotenv.2023.167632
    Drought affects vegetation growth to a large extent. Understanding the dynamic changes of vegetation during drought is of great significance for agricultural and ecological management and climate change adaptation. The relations between vegetation and drought have been widely investigated, but how vegetation loss and restoration in response to drought remains unclear. Using the standardized precipitation evapotranspiration index (SPEI) and the normalized difference vegetation index (NDVI) data, this study developed an evaluation framework for exploring the responses of vegetation loss and recovery to meteorological drought, and applied it to the humid subtropical Pearl River basin (PRB) in southern China for estimating the loss and recovery of three vegetation types (forest, grassland, cropland) during drought using the observed NDVI changes. Results indicate that vegetation is more sensitive to drought in high-elevation areas (lag time  8 months). Vegetation loss (especially in cropland) is found to be more sensitive to drought duration than drought severity and peak. No obvious linear relationship between drought intensity and the extent of vegetation loss is found. Regardless of the intensity, drought can cause the largest probability of mild loss of vegetation, followed by moderate loss, and the least probability of severe loss. Large spatial variability in the probability of vegetation loss and recovery time is found over the study domain, with a higher probability (up to 50 %) of drought-induced vegetation loss and a longer recovery time (>7 months) mostly in the high-elevation areas. Further analysis suggests that forest shows higher but cropland shows lower drought resistance than other vegetation types, and grassland requires a shorter recovery time (4.2-month) after loss than forest (5.1-month) and cropland (4.8-month).
    Matched MeSH terms: Droughts*
  7. Fulltext Responding to extremes: managing urban water scarcity in the late nineteenth-century Straits Settlements
    Williamson F
    Water Hist, 2020 Oct 29.
    PMID: 33144897 DOI: 10.1007/s12685-020-00260-6
    In 1877, the major towns of the Straits Settlements-Singapore, George Town, Penang Island and Malacca-suffered a drought of exceptional magnitude. The drought's natural instigator was the El Niño phase of the El Niño Southern Oscillation, a climatic phenomenon then not understood by contemporary observers. The 1877 event has been explored in some depth for countries including India, China and Australia. Its impact on Southeast Asia however is less well-known and the story of how the event unfolded in Singapore and Malaysia has not been told. This paper explores how the contemporary British government responded to the drought, arguing that its impact on hydraulic management was at best minimal yet, it did have impact on other areas, such as forest reservation with the hope of preserving future rainfall. It also highlights how, in contrast to studies on urban water plans in other British Asian colonies, the colonial authorities in the Straits Settlements had a far less coherent and meaningful relationship with water in their town planning schemes. As this paper is part of a special issue, Water History in the time of COVID-19, it has undergone modified peer review.
    Matched MeSH terms: Droughts
  8. Impacts of droughts and floods on croplands and crop production in Southeast Asia - An application of Google Earth Engine
    Venkatappa M, Sasaki N, Han P, Abe I
    Sci Total Environ, 2021 Nov 15;795:148829.
    PMID: 34252779 DOI: 10.1016/j.scitotenv.2021.148829
    While droughts and floods have intensified in recent years, only a handful of studies have assessed their impacts on croplands and production in Southeast Asia. Here, we used the Google Earth Engine to assess the droughts and floods and their impacts on croplands and crop production over 40 years from 1980 to 2019. Using the Palmer Drought Severity Index (PDSI) as the basis for determining the drought and flood levels, and crop damage levels, crop production loss in both the Monsoon Climate Region (MCR) and the Equatorial Climate Region (ECR) of Southeast Asia was assessed over 47,192 grid points with 10 × 10-kilometer resolution. We found that rainfed crops were severely affected by droughts in the MCR and floods in the ECR. About 9.42 million ha and 3.72 million ha of cropland was damaged by droughts and floods, respectively. We estimated a total loss of 20.64 million tons of crop production between 2015 and 2019. Rainfed crops in Thailand, Cambodia, and Myanmar were strongly affected by droughts, whereas Indonesia, the Philippines, and Malaysia were more affected by floods over the same period. Accordingly, four levels of policy interventions were prioritized by considering the geolocated crop damage levels.
    Matched MeSH terms: Droughts*
  9. Fulltext RNA-seq data of Oryza sativa cultivar Kuku Belang under PEG treatment
    Toni B, Monfared HH, Mat Isa MN, Md Isa N, Ismail I, Zainal Z
    Data Brief, 2017 Oct;14:260-266.
    PMID: 28795103 DOI: 10.1016/j.dib.2017.07.043
    Drought stress is the main abiotic factor affecting rice production. Rain-fed upland rice which is grown on unbounded fields and totally dependent on rainfall for moisture is more prone to drought stress compared to rice from other ecosystems. However, upland rice has adapted to this limited water condition, thus are more drought tolerant than rice from other ecosystems. We performed the first transcriptome sequencing of drought tolerant indica upland rice cultivar Kuku Belang to identify differentially expressed genes related to drought tolerance mechanism. Raw reads for non-treated and PEG-treated Oryza sativa subspecies indica cv. Kuku Belang were deposited in the NCBI SRA database with accession number SRP074520 (https://www.ncbi.nlm.nih.gov/sra?term=SRP074520).
    Matched MeSH terms: Droughts
  10. Fulltext Transcriptome Profiling of Haloxylon persicum (Bunge ex Boiss and Buhse) an Endangered Plant Species under PEG-Induced Drought Stress
    Thayale Purayil F, Rajashekar B, S Kurup S, Cheruth AJ, Subramaniam S, Hassan Tawfik N, et al.
    Genes (Basel), 2020 06 10;11(6).
    PMID: 32531994 DOI: 10.3390/genes11060640
    Haloxylon persicum is an endangered western Asiatic desert plant species, which survives under extreme environmental conditions. In this study, we focused on transcriptome analysis of H. persicum to understand the molecular mechanisms associated with drought tolerance. Two different periods of polyethylene glycol (PEG)-induced drought stress (48 h and 72 h) were imposed on H. persicum under in vitro conditions, which resulted in 18 million reads, subsequently assembled by de novo method with more than 8000 transcripts in each treatment. The N50 values were 1437, 1467, and 1524 for the control sample, 48 h samples, and 72 h samples, respectively. The gene ontology (GO) and Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis resulted in enrichment of mitogen-activated protein kinase (MAPK) and plant hormone signal transduction pathways under PEG-induced drought conditions. The differential gene expression analysis (DGEs) revealed significant changes in the expression pattern between the control and the treated samples. The KEGG analysis resulted in mapping transcripts with 138 different pathways reported in plants. The differential expression of drought-responsive transcription factors depicts the possible signaling cascades involved in drought tolerance. The present study provides greater insight into the fundamental transcriptome reprogramming of desert plants under drought.
    Matched MeSH terms: Droughts
  11. Influence of field soil drought stress on some key physiological, yield and quality traits of selected newly-developed hexaploid bread wheat (triticum aestivum l.) cultivars
    Tariq Shahzad, Muhammad Mansoor Javaid, Hasnain Waheed, Tasawer Abbas, Muhammad Ashraf, Feng-Min Li, et al.
    Sains Malaysiana, 2018;47:2625-2635.
    Drought is one of the commonly occurring environmental stresses, limiting crop production in many countries. Selection
    of cultivar is the most effective and economical means for alleviating the adverse effects of drought stress on crops. The
    present study aimed to investigate the growth, some physiological processes, yield and quality of some newly-developed
    wheat cultivars (AARI-2011, AAS-2011, Faisalabad-2008, Millat-2011 and Punjab-2011) under field drought stress
    conditions. The cultivars were sown in a field under normal irrigation and drought-induced conditions. Maximum net
    photosynthetic rate was recorded in cv. AAS-2011 at growth stage of 67 days after wheat emergence under normal irrigation
    and cv. Faisalabad-2008 at 67 days after wheat emergence under drought condition. Leaf stomatal conductance and
    transpiration rate were maximum in cv. Faisalabad-2008 under drought conditions. The adverse effects of drought stress
    were observed more on cv. Millat-2011 than Faisalabad-2008, with respect to net photosynthetic rate and transpiration.
    Drought exerted a significant adverse effect on leaf stomatal conductance at 74 days after wheat emergence which was
    recorded as 230 mmol m-2 s-1. Among the cultivars, AAS-2011 recorded maximum yield traits and grain yield under normal
    irrigation condition and Faisalabad-2008 under drought condition. Cultivar Millat-2011 was the most susceptible to
    drought and Faisalabad-2008 the most resistant to drought. Faisalabad-2008 maintained the quality at the most under
    drought stress conditions. It is concluded that Fasialabad-2008 should be grown under field drought conditions to achieve
    maximal yield and quality of wheat.
    Matched MeSH terms: Droughts
  12. Climate change and variability over Malaysia: gaps In science and research information
    Tangang FT, Liew Juneng, Ester Salimun, Kwan MS, Loh JL, Halimatun Muhamad
    Sains Malaysiana, 2012;41:1355-1366.
    This paper provides an overview of the current available scientific knowledge pertaining to climate change and climate variability over Malaysia. Malaysia is situated in the western part of the Maritime Continent of the Southeast Asian region. Hence, regional climate change and climate variability over this region are of central importance to the understanding of climate change in Malaysia. The latest regional climate downscaling study indicates that, depending on the emission scenario, the mean surface temperature over Malaysia would increase by 3-5oC by the end of the 21st century. The mean precipitation is projected to decrease (increase) during Northern Hemisphere winter (summer). However, future variabilities associated with regional phenomena such as the monsoon, El Nino-Southern Oscillation (ENSO), Indian Ocean Dipole (IOD) and Madden-Julian Oscillation (MJO) are largely unknown. Current knowledge on the intensity and frequency of future extreme events (drought and flood) is limited. This is also the case for regional sea level rise and long-term changes in regional seas, especially in the southern region of the South China Sea. We conclude that knowledge gap in the science of climate change over Malaysia and the surrounding region remains wide.
    Matched MeSH terms: Droughts
  13. ANAC019 is required for recovery of reproductive development under drought stress in Arabidopsis
    Sukiran NL, Ma JC, Ma H, Su Z
    Plant Mol Biol, 2019 Jan;99(1-2):161-174.
    PMID: 30604322 DOI: 10.1007/s11103-018-0810-1
    KEY MESSAGE: Morphological and transcriptomic evidences provide us strong support for the function of ANAC019 in reproductive development under drought stress. Plants are sensitive to drought conditions, particularly at the reproductive stage. Several studies have reported drought effects on crop reproductive development, but the molecular mechanism underlying drought response during reproduction is still unclear. A recent study showed that drought induces in Arabidopsis inflorescence increased expression of many genes, including ANAC019. However, the function of ANAC019 in drought response during reproductive development has not been characterized. Here, we report an investigation of the ANAC019 function in the response to drought during reproduction. ANAC019 is preferentially expressed in the inflorescence compared with the leaf, suggesting possible roles in regulating both stress response and flower development. The anac019 mutant was more sensitive to drought than WT plant, and exhibited a delay in recovery of floral organ development under prolonged drought stress. Moreover, many fewer genes were differentially expressed in the anac019 inflorescence under drought than that of WT, suggesting that the mutant was impaired in drought-induced gene expression. The genes affected by ANAC019 were associated with stress and hormone responses as well as floral development. In particular, the expression levels of several key drought-induced genes, DREB2A, DREB2B, ARF2, MYB21 and MYB24, were dramatically reduced in the absence of ANAC019, suggesting that ANAC019 is an upstream regulator these genes for drought response and flower development. These results provide strong support for the potential function of ANAC019 in reproductive development under drought stress.
    Matched MeSH terms: Droughts
  14. Fulltext Pittosporum peridoticola (Pittosporaceae), a new ultramafic obligate species restricted to Kinabalu Park (Sabah, Malaysia)
    Sugau JB, van der Ent A
    Bot Stud, 2015 Dec;57(1):4.
    PMID: 28510789 DOI: 10.1186/s40529-016-0119-9
    BACKGROUND: Kinabalu Park, in Sabah (Malaysia) on Borneo Island, is renowned for the exceptionally high plant diversity it protects, with at least 5000 plant species enumerated to date. Discoveries of plant novelties continue to be made in Sabah, especially on isolated ultramafic outcrops, including in the genus Pittosporum (Pittosporaceae) with P. linearifolium from Bukit Hampuan on the southern border of the Park, and P. silamense from Bukit Silam in Eastern Sabah, both narrow endemics restricted to ultramafic soils.

    RESULTS: A distinctive new species of Pittosporum (P. peridoticola J.B.Sugau and Ent, sp. nov.) was discovered on Mount Tambuyukon in the north of Kinabalu Park during ecological fieldwork. The diagnostic morphological characters of this taxon are discussed and information about the habitat in which it grows is provided. The soil chemistry in the rooting zone of P. peridoticola has high magnesium to calcium quotients, high extractable nickel and manganese concentrations, but low potassium and phosphorus concentrations, as is typical for ultramafic soils. Analysis of foliar samples of various Pittosporum-species originating from ultramafic and non-ultramafic soils showed a comparable foliar elemental stoichiometry that is suggestive of 'Excluder-type' ecophysiology.

    CONCLUSION: Pittosporum peridoticola is an ultramafic obligate species restricted to Kinabalu Park with only two known populations within the boundaries of the protected area. It is vulnerable to any future stochastic landscape disturbance events, such as forest fires or severe droughts, and therefore its conservation status is 'Near Threatened'.

    Matched MeSH terms: Droughts
  15. Fulltext Conservation tillage improves productivity of sunflower (Helianthus annuus L.) under reduced irrigation on sandy loam soil
    Sher A, Arfat MY, Ul-Allah S, Sattar A, Ijaz M, Manaf A, et al.
    PLoS One, 2021;16(12):e0260673.
    PMID: 34932582 DOI: 10.1371/journal.pone.0260673
    Sunflower production is significantly lower in arid and semi-arid regions due to various crop management problem. Conservation of tillage provides the most excellent opportunity to reduce degradation of soil reserves and increase soil productivity. The main objective of this study was to investigate the combined effects of conservation tillage and drought stress on growth and productivity of different sunflower hybrids. Experimental treatments included two sunflower hybrids ('NK-Senji' and 'S-278'), two drought stress treatments (i.e., well-watered and drought stress at flowering and grain filling stages) and three tillage practices (i.e., conservation, minimum and deep tillage). The results indicated that morphological and physiological parameters, and yield-related traits were significantly (P≤0.05) affected by all individual factors; however, their interactive effects were non-significant. Among sunflower hybrids, 'NK-Senji' performed better for morphological, physiological, and yield-related traits than 'S-278'. Similarly, conservation tillage observed better traits compared to the rest of the tillage practices included in the study. Nonetheless, conservation tillage improved growth and yield-related traits of hybrid 'NK-Senji' under drought stress. Hence, it is concluded that conservation tillage can improve the productivity of sunflower under low moisture availability. Therefore, conservation tillage could be suggested in the areas of lower water ability to improve sunflower production. Nonetheless, sunflower hybrids or varieties need thorough testing for their adaptability to conservation tillage and low moisture availability before making recommendations.
    Matched MeSH terms: Droughts
  16. Foliar Boron spray for improved yield, oil quality and water use efficiency in water stressed sunflower
    Shehzad MA, Maqsood M, Abbas T, Ahmad N
    Sains Malaysiana, 2016;45:1497-1507.
    Boron (B) is a mineral considered essential for improving sunflower (Helianthus annuus L.) resistance to drought. B supplements (0, 15-, 30- and 45 mg L-1) under well-watered and variable water deficit levels (64 and 53 mm irrigation depths) were evaluated for their effects on growth, oil quality and water use efficiency (WUE) in a field study for two consecutive years (i.e. 2011 and 2012). The duration of 50% inflorescence emergence, 50% flowering and 50% maturity stages were reduced with increasing moisture stress. All B application rates improved sunflower growth compared to no B control treatment. The moisture deficit treatments of 64 and 53 mm irrigation depths significantly (p<0.05) reduced the yield-related components. Achenes/head, achenes weight and achene yield under water stress conditions were considerably improved by foliar application of B at 30 mg L-1. An increase in protein contents and a decrease in oil contents were observed with B foliar application under moisture deficit treatments. Foliar application of B (30 mg L-1) on water stressed plants also resulted in increased WUE. The highest net benefits were achieved with B concentration of 30 mg L-1 under well-watered and mild deficit water level of 64 mm irrigation depth. The highest application rate of B (45 mg L-1) gave the best results at the most severe water deficit level. In conclusion, the B rates of 30 and 41 mg L-1 performed best for improving drought tolerance in terms of higher sunflower productivity under mild and higher water deficit conditions
    Matched MeSH terms: Droughts
  17. Fulltext Marker assisted pyramiding of drought yield QTLs into a popular Malaysian rice cultivar, MR219
    Shamsudin NA, Swamy BP, Ratnam W, Sta Cruz MT, Raman A, Kumar A
    BMC Genet, 2016;17:30.
    PMID: 26818269 DOI: 10.1186/s12863-016-0334-0
    Three drought yield QTLs, qDTY 2.2, qDTY 3.1, and qDTY 12.1 with consistent effect on grain yield under reproductive stage drought stress were pyramided through marker assisted breeding with the objective of improving the grain yield of the elite Malaysian rice cultivar MR219 under reproductive stage drought stress. Foreground selection using QTL specific markers, recombinant selection using flanking markers, and background selection were performed. BC1F3-derived lines with different combinations of qDTY 2.2 , qDTY 3.1, and qDTY 12.1 were evaluated under both reproductive stage drought stress and non-stress during the dry seasons of 2013 and 2014 at IRRI.
    Matched MeSH terms: Droughts
  18. Fulltext Meta-Analysis of Quantitative Traits Loci (QTL) Identified in Drought Response in Rice (Oryza sativa L.)
    Selamat N, Nadarajah KK
    Plants (Basel), 2021 Apr 07;10(4).
    PMID: 33917162 DOI: 10.3390/plants10040716
    Rice is an important grain that is the staple food for most of the world's population. Drought is one of the major stresses that negatively affects rice yield. The nature of drought tolerance in rice is complex as it is determined by various components and has low heritability. Therefore, to ensure success in breeding programs for drought tolerant rice, QTLs (quantitative trait loci) of interest must be stable in a variety of plant genotypes and environments. This study identified stable QTLs in rice chromosomes in a variety of backgrounds and environments and conducted a meta-QTL analysis of stable QTLs that have been reported by previous research for use in breeding programs. A total of 653 QTLs for drought tolerance in rice from 27 genetic maps were recorded for analysis. The QTLs recorded were related to 13 traits in rice that respond to drought. Through the use of BioMercartor V4.2, a consensus map containing QTLs and molecular markers were generated using 27 genetic maps that were extracted from the previous 20 studies and meta-QTL analysis was conducted on the consensus map. A total of 70 MQTLs were identified and a total of 453 QTLs were mapped into the meta-QTL areas. Five meta-QTLs from chromosome 1 (MQTL 1.5 and MQTL 1.6), chromosome 2 (MQTL2.1 and MQTL 2.2) and chromosome 3 (MQTL 3.1) were selected for functional annotation as these regions have high number of QTLs and include many traits in rice that respond to drought. A number of genes in MQTL1.5 (268 genes), MQTL1.6 (640 genes), MQTL 2.1 (319 genes), MQTL 2.2 (19 genes) and MQTL 3.1 (787 genes) were annotated through Blast2GO. Few major proteins that respond to drought stress were identified in the meta-QTL areas which are Abscisic Acid-Insensitive Protein 5 (ABI5), the G-box binding factor 4 (GBF4), protein kinase PINOID (PID), histidine kinase 2 (AHK2), protein related to autophagy 18A (ATG18A), mitochondrial transcription termination factor (MTERF), aquaporin PIP 1-2, protein detoxification 48 (DTX48) and inositol-tetrakisphosphate 1-kinase 2 (ITPK2). These proteins are regulatory proteins involved in the regulation of signal transduction and gene expression that respond to drought stress. The meta-QTLs derived from this study and the genes that have been identified can be used effectively in molecular breeding and in genetic engineering for drought resistance/tolerance in rice.
    Matched MeSH terms: Droughts
  19. Fulltext Combined application of zinc and silicon alleviates terminal drought stress in wheat by triggering morpho-physiological and antioxidants defense mechanisms
    Sattar A, Wang X, Abbas T, Sher A, Ijaz M, Ul-Allah S, et al.
    PLoS One, 2021;16(10):e0256984.
    PMID: 34618822 DOI: 10.1371/journal.pone.0256984
    Wheat is an important global staple food crop; however, its productivity is severely hampered by changing climate. Erratic rain patterns cause terminal drought stress, which affect reproductive development and crop yield. This study investigates the potential and zinc (Zn) and silicon (Si) to ameliorate terminal drought stress in wheat and associated mechanisms. Two different drought stress levels, i.e., control [80% water holding capacity (WHC) was maintained] and terminal drought stress (40% WHC maintained from BBCH growth stage 49 to 83) combined with five foliar-applied Zn-Si combinations (i.e., control, water spray, 4 mM Zn, 40 mM Si, 4 mM Zn + 40 mM Si applied 7 days after the initiation of drought stress). Results revealed that application of Zn and Si improved chlorophyll and relative water contents under well-watered conditions and terminal drought stress. Foliar application of Si and Zn had significant effect on antioxidant defense mechanism, proline and soluble protein, which showed that application of Si and Zn ameliorated the effects of terminal drought stress mainly by regulating antioxidant defense mechanism, and production of proline and soluble proteins. Combined application of Zn and Si resulted in the highest improvement in growth and antioxidant defense. The application of Zn and Si improved yield and related traits, both under well-watered conditions and terminal drought stress. The highest yield and related traits were recorded for combined application of Zn and Si. For grain and biological yield differences among sole and combined Zn-Si application were statistically non-significant (p>0.05). In conclusion, combined application of Zn-Si ameliorated the adverse effects of terminal drought stress by improving yield through regulating antioxidant mechanism and production of proline and soluble proteins. Results provide valuable insights for further cross talk between Zn-Si regulatory pathways to enhance grain biofortification.
    Matched MeSH terms: Droughts
  20. Fulltext MicroRNA and Transcription Factor: Key Players in Plant Regulatory Network
    Samad AFA, Sajad M, Nazaruddin N, Fauzi IA, Murad AMA, Zainal Z, et al.
    Front Plant Sci, 2017;8:565.
    PMID: 28446918 DOI: 10.3389/fpls.2017.00565
    Recent achievements in plant microRNA (miRNA), a large class of small and non-coding RNAs, are very exciting. A wide array of techniques involving forward genetic, molecular cloning, bioinformatic analysis, and the latest technology, deep sequencing have greatly advanced miRNA discovery. A tiny miRNA sequence has the ability to target single/multiple mRNA targets. Most of the miRNA targets are transcription factors (TFs) which have paramount importance in regulating the plant growth and development. Various families of TFs, which have regulated a range of regulatory networks, may assist plants to grow under normal and stress environmental conditions. This present review focuses on the regulatory relationships between miRNAs and different families of TFs like; NF-Y, MYB, AP2, TCP, WRKY, NAC, GRF, and SPL. For instance NF-Y play important role during drought tolerance and flower development, MYB are involved in signal transduction and biosynthesis of secondary metabolites, AP2 regulate the floral development and nodule formation, TCP direct leaf development and growth hormones signaling. WRKY have known roles in multiple stress tolerances, NAC regulate lateral root formation, GRF are involved in root growth, flower, and seed development, and SPL regulate plant transition from juvenile to adult. We also studied the relation between miRNAs and TFs by consolidating the research findings from different plant species which will help plant scientists in understanding the mechanism of action and interaction between these regulators in the plant growth and development under normal and stress environmental conditions.
    Matched MeSH terms: Droughts
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