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Reference values of hematological, serum biochemical and hormonal examinations in female cynomolgus monkeys (Macaca fascicularis) of feral origin

Yoshida T, Katsuta A, Cho F

Jikken Dobutsu, 1989 Jul;38(3):259-62.
PMID: 2676567

Blood samples were collected from clinically healthy female cynomolgus monkeys imported from Indonesia, the Philippines and Malaysia. These animals were maintained under uniform environmental conditions for four to five years. The blood samples were examined for their hematological, serum biochemical and hormonal values. The ranges of the values as well as their arithmetic means and standard deviations have been tabulated with respect to each examination item.
Fulltext A new genus and species of Brontinae from Borneo (Coleoptera, Silvanidae)

Yoshida T, Hirowatari T

Zookeys, 2018.
PMID: 30584392 DOI: 10.3897/zookeys.805.28757

A new silvanid genus Borneophanusgen. n. is described based on specimens collected from Malaysian Borneo. A new species, B.spinosussp. n., is described herein. Digitiform sensilla on the apical maxillary palpomere is reported in Silvanidae for the first time.
Redescription of the Indo-West Pacific cardinalfishes (Perciformes: Apogonidae) Rhabdamia spilota Allen Kuiter 1994 and R. gracilis (Bleeker 1856)

Yoshida T, Motomura H

Zootaxa, 2018 Jan 31;4377(2):178-190.
PMID: 29690063 DOI: 10.11646/zootaxa.4377.2.2

Rhabdamia spilota Allen Kuiter 1994 (Apogonidae), a poorly known cardinalfish previously known only from the Philippines, Indonesia and the Red Sea, is redescribed on the basis of 70 specimens (20.9-61.2 mm standard length) (including types), from the Indo-West Pacific (Red Sea, Andaman Sea, Japan, South China Sea, the Philippines, Indonesia, New Caledonia, and Australia). Because most reports of the similar species R. gracilis (Bleeker 1856), following its original description, were based on misidentifications, R. gracilis is also redescribed (based on 98 Indo-West Pacific specimens from Seychelles, Maldives, Andaman Sea, Japan, Malaysia, Indonesia, New Caledonia, and Australia, 27.9-59.3 mm standard length); a lectotype is designated for it. Rhabdamia spilota differs from R. gracilis in having 27-33 (mode 30-31) developed gill rakers [vs. 22-27 (mode 24) in the latter], 27-33 (30) gill rakers including rudiments [vs. 23-27 (24-25)], a black stripe from the jaw tips to the anterior margin of the orbit (vs. black pigments only at snout and tip of lower jaw), 3-6 reddish brown to blackish blotches on the opercle and anterior of body (vs. blotches absent), and indistinct black pigment restricted to caudal fin outer margins (vs. pigment scattered over entire fin). Rhabdamia gracilis exhibits sexual dichromatism, female specimens larger than 41.3 mm SL having one or two black stripes on the lateral surface of the body; the stripes are absent in males and smaller females. No evidence of sexual dichromatism was found in R. spilota.
A new genus of Silvaninae (Coleoptera: Silvanidae) with two new species from the Malay Peninsula

Yoshida T, Hirowatari T, Hashim R

Zootaxa, 2017 May 01;4258(4):365-374.
PMID: 28609912 DOI: 10.11646/zootaxa.4258.4.4

A new silvanid genus Dentirotacorimus gen. nov. is described based on specimens collected from Ulu Gombak (Malay Peninsula), Malaysia. Two new species, D. reticulatus sp. nov. and D. zigzag sp. nov., are described herein. A key to species of this genus and a table listing states of diagnostic characters of Corimus-like genera, including this new genus, are provided.
Spraguea (Microsporida: Spraguidae) infections in the nervous system of the Japanese anglerfish, Lophius litulon (Jordan), with comments on transmission routes and host pathology

Freeman MA, Yokoyama H, Osada A, Yoshida T, Yamanobe A, Ogawa K

J Fish Dis, 2011 Jun;34(6):445-52.
PMID: 21545438 DOI: 10.1111/j.1365-2761.2011.01255.x

Anglerfish from the genus Lophius are a globally important commercial fishery. The microsporidian Spraguea infects the nervous system of these fish resulting in the formation of large, visible parasitic xenomas. Lophius litulon from Japan were investigated to evaluate the intensity and distribution of Spraguea xenomas throughout the nervous system and to assess pathogenicity to the host and possible transmission routes of the parasite. Spraguea infections in L. litulon had a high prevalence; all fish over 403 mm in standard length being infected, with larger fish usually more heavily infected than smaller fish. Seventy percent of all fish examined had some gross visible sign of infection. The initial site of development is the supramedullary cells on the dorsal surface of the medulla oblongata, where all infected fish have parasitic xenomas. As the disease progresses, a number of secondary sites typically become infected such as the spinal, trigeminal and vagus nerves. Fish with infection in the vagus nerve bundles often have simultaneous sites of infection, in particular the spinal nerves and along the ventral nerve towards the urinary bladder. Advanced vagus nerve infections sometimes form xenomas adjacent to kidney tissue. Spraguea DNA was amplified from the contents of the urinary bladders of two fish, suggesting that microsporidian spores may be excreted in the urine. We conclude that supramedullary cells on the hindbrain are the primary site of infection, which is probably initiated at the cutaneous mucous glands where supramedullary cells are known to extend their peripheral axons. The prevalence of Spraguea infections in L. litulon was very high, and infections often extremely heavy; however, no associated pathogenicity was observed, and heavily infected fish were otherwise normal.
Fulltext Dissemination of streptococcal pyrogenic exotoxin G (spegg) with an IS-like element in fish isolates of Streptococcus dysgalactiae

Abdelsalam M, Chen SC, Yoshida T

FEMS Microbiol Lett, 2010 Aug 1;309(1):105-13.
PMID: 20528946 DOI: 10.1111/j.1574-6968.2010.02024.x

The Lancefield group C alpha-hemolytic Streptococcus dysgalactiae ssp. dysgalactiae (GCSD) causes systemic granulomatous inflammatory disease and high mortality rates in infected fish. Superantigen and streptolysin S genes are the most important virulence factors contributing to an invasive streptococcal infection. PCR amplification revealed that all strains isolated from moribund fish harbored the streptolysin S structural gene (sagA). GCSD fish isolates were PCR negative for emm, speA, speB, speC, speM, smeZ, and ssa. However, the size of the streptococcal pyrogenic exotoxin G (spegg) locus, a superantigen, in positive S. dysgalactiae fish and pig strains was variable. The ORF of the spegg locus of 26 GCSD fish strains and one GCSD pig strain was inserted with IS981SC. Interestingly, the ORF of the spegg locus of two fish strains of GCSD collected in Malaysia was inserted with an IS981SC-IS1161 hybrid IS element. The hybrid IS element was found in all of the GCSD fish isolates and one GCSD pig through PCR screening. Although no insertion sequence (IS) was detected in the spegg locus of S. dysgalactiae ssp. equisimilis (GCSE) strains, a five-nucleotide deletion mutation was detected in the ORF of the spegg locus of one GCSE strain at the supposed site of IS981SC insertion, resulting in a frameshift mutation.
Fulltext Phenotypic and genetic characterizations of Streptococcus dysgalactiae strains isolated from fish collected in Japan and other Asian countries

Abdelsalam M, Chen SC, Yoshida T

FEMS Microbiol Lett, 2010 Jan;302(1):32-8.
PMID: 19895643 DOI: 10.1111/j.1574-6968.2009.01828.x

Lancefield group C Streptococcus dysgalactiae is an emerging fish pathogen, which was first isolated in 2002 in Japan. Streptococcus dysgalactiae isolates collected from diseased fish in Japan (n=12), Taiwan (n=12), China (n=2), Malaysia (n=3), and Indonesia (n=1) were characterized using biased sinusoidal field gel electrophoresis (BSFGE), sodA gene sequence analysis, and antimicrobial susceptibility. These isolates exhibited high phenotypic homogeneity irrespective of the countries from where the strains were collected. Seventeen isolates were found to be resistant to oxytetracycline and carried the tet(M) gene, except for the strains collected in Taiwan and the PP1564 strain collected in China. The sodA gene sequence analysis revealed that 23 isolates were identical, except for one Japanese isolate (KNH07902), in which a single nucleotide differed from that of the other isolates. Based on BSFGE typing by ApaI macrorestriction, the isolates - including the Japanese, Taiwanese, and Chinese isolates - could be grouped into one main cluster at a 70% similarity level. However, the macrorestriction genotypes of some isolates were apparently distinct from those of the main cluster.
Combined use of ribotyping, PFGE typing and IS431 typing in the discrimination of nosocomial strains of methicillin-resistant Staphylococcus aureus

Yoshida T, Kondo N, Hanifah YA, Hiramatsu K

Microbiol. Immunol., 1997;41(9):687-95.
PMID: 9343819

We have previously reported the phenotypic characterization of methicillin-resistant Staphylococcus aureus (MRSA) clinical strains isolated in Malaya University Hospital in the period 1987 to 1989 using antibiogram, coagulase typing, plasmid profiles, and phage typing. Here, we report the analysis of the same strains with three genotyping methods; ribotyping, pulsed-field gel electrophoresis (PFGE) typing, and IS431 typing (a restriction enzyme fragment length polymorphism analysis using an IS431 probe). Ribotyping could discriminate 46 clinical MRSA strains into 5 ribotypes, PFGE typing into 22 types, and IS431 typing into 15 types. Since the differences of the three genotyping patterns from strain to strain were quite independent from one another, the combined use of the three genotyping methods could discriminate 46 strains into 39 genotypes. Thus, the powerful discriminatory ability of the combination was demonstrated.
Expression of the serum opacity factor gene and the variation in its upstream region in Streptococcus dysgalactiae isolates from fish

Nishiki I, Minami T, Chen SC, Itami T, Yoshida T

J Gen Appl Microbiol, 2012;58(6):457-63.
PMID: 23337581

Group C Streptococcus dysgalactiae (GCSD) is a pathogen of farmed fish. Almost all GCSD isolates from Asian countries, including Japan, Taiwan, Malaysia, and China, have a serum opacity factor (SOF-FD). Although the SOF-FD sequences in different GCSD isolates are identical, different opacification activities are observed. Three types of variations were observed in the upstream sequence of the sof-FD gene in GCSD isolates with different SOF-FD activities. Type 1 was characterized by insertion of an IS981-like element into the upstream region of the sof-FD gene. In Type 2, an IS981-like element was inserted into the upstream region in a direction opposite to that in Type 1. In Type 3, no IS element was inserted. Type 1 was predominant among Japanese isolates (129 of 133). Isolates from other Asian countries were generally Type 3 (13 of 16). Except for 1 strain, Type 1 strains exhibited opacification activities with optical densities (ODs)>0.6, while Type 2 and Type 3 strains have low opacification activities (ODs >0.2). Only Type 1 strains have putative -10 and -35 promoter regions upstream of the sof-FD gene, and the expression level of the sof-FD gene was higher in Type 1 strains than in Type 2 and Type 3 strains.
Marine microplastics in the ASEAN region: A review of the current state of knowledge

Curren E, Kuwahara VS, Yoshida T, Leong SCY

Environ Pollut, 2021 Nov 01;288:117776.
PMID: 34280748 DOI: 10.1016/j.envpol.2021.117776

Microplastic pollution is a prevalent and serious problem in marine environments. These particles have a detrimental impact on marine ecosystems. They are harmful to marine organisms and are known to be a habitat for toxic microorganisms. Marine microplastics have been identified in beach sand, the seafloor and also in marine biota. Although research investigating the presence of microplastics in various marine environments have increased across the years, studies in Southeast Asia are still relatively limited. In this paper, 36 studies on marine microplastic pollution in Southeast Asia were reviewed and discussed, focusing on microplastics in beach and benthic sediments, seawater and marine organisms. These studies have shown that the presence of fishing harbours, aquaculture farms, and tourism result in an increased abundance of microplastics. The illegal and improper disposal of waste from village settlements and factories also contribute to the high abundance of microplastics observed. Hence, it is crucial to identify the hotspots of microplastic pollution, for assessment and mitigation purposes. Future studies should aim to standardize protocols and quantification, to allow for better quantification and assessment of the levels of microplastic contamination for monitoring purposes.
Spiny but Subitaneous Eggs: Egg Morphology and Hatching in Acartia Copepods in the Tropics

Nakajima R, Yoshida T, Sakaguchi SO, Othman BHR, Toda T

Zool Stud, 2019;58:e5.
PMID: 31966306 DOI: 10.6620/ZS.2019.58-05

Egg surface ornamentation, egg production rates, and hatching success of two calanoid copepod species (Acartia pacifica and Acartia cf. erythraea) were examined in a tropical coral reef of Tioman Island, Malaysia, near the equator (2°N). All observed females of A. pacifica and A. cf. erythraea produced eggs with spines on the surface, either short or long, which are common in resting eggs in temperate ecosystems that hatch when environmental conditions are favorable or after a certain refractory period. However, all of these spiny eggs in the present study hatched within 48 hours when exposed to ambient seawater temperature, suggesting that they were subitaneous eggs. Such spine ornamentation has been thought to be an adaptive feature only for resting eggs to survive during egg dormancy, but the presence of spines on subitaneous eggs suggests further possible functions of these spines such as reducing the risks of ingestion by predators.
Draft genome of novel cyanobacteria Sphaerothrix Gracilis isolated from coastal microplastics reveal insights to chemical ecology, bloom and plastic-utilization potential

Curren E, Kuwahara VS, Yoshida T, Leong SCY

Funct Integr Genomics, 2024 Mar 02;24(2):46.
PMID: 38429576 DOI: 10.1007/s10142-024-01328-9

Cyanobacteria are oxygenic photosynthetic organisms which are found across many ecosystems, including freshwater and marine habitats. They are also found on natural and artificial surfaces. In this study, we cultured and characterise a novel cyanobacterium from the surfaces of foam microplastics of tropical coastal waters. We study the chemical ecology of this cyanobacterium, Sphaerothrix gracilis gen. et sp. nov., together with its potential to form harmful cyanobacterial blooms and bioremediation applications to combat plastic pollution. The genome of S. gracilis spanned 6.7 Mbp, with identification of antibiotic resistance, nitrogen-fixation, plastic-degrading and genes involved in harmful metabolite production. The transport of potentially harmful S. gracilis in coastal environments could have severe implications on human health and food security, especially in times of a cyanobacterial bloom.
Structures of triterpenoids from the leaves of Lansium domesticum

Matsumoto T, Kitagawa T, Ohta T, Yoshida T, Imahori D, Teo S, et al.

J Nat Med, 2019 Sep;73(4):727-734.
PMID: 31104253 DOI: 10.1007/s11418-019-01319-2

From the methanolic extract of the leaves of Lansium domesticum, three new onoceranoid-type triterpenoids, lansium acids X-XII and a new cycloartane-type triterpene, lansium acid XIII, were isolated. The chemical structures of the isolated new compounds were elucidated on the basis of chemical/physicochemical evidence. For new onoceranoid-type triterpenoids, the absolute configurations were established by comparison of experimental and predicted electronic circular dichroism (ECD) data. The isolated onoceranoid-type triterpenoids showed antimutagenic effects in the Ames assay against 3-amino-1,4-dimethyl-5H-pyrido[4,3-b]indole (Trp-P-1).
Fulltext Seasonal and year-round use of the Kushiro Wetland, Hokkaido, Japan by sika deer (Cervus nippon yesoensis)

Takafumi H, Kamii T, Murai T, Yoshida R, Sato A, Tachiki Y, et al.

PeerJ, 2017;5:e3869.
PMID: 29038752 DOI: 10.7717/peerj.3869

The sika deer (Cervus nippon yesoensis) population in the Ramsar-listed Kushiro Wetland has increased in recent years, and the Ministry of the Environment of Japan has decided to take measures to reduce the impact of deer on the ecosystem. However, seasonal movement patterns of the deer (i.e., when and where the deer inhabit the wetland) remain unclear. We examined the seasonal movement patterns of sika deer in the Kushiro Wetland from 2013 to 2015 by analyzing GPS location data for 28 hinds captured at three sites in the wetland. Seasonal movement patterns were quantitatively classified as seasonal migration, mixed, dispersal, nomadic, resident, or atypical, and the degree of wetland utilization for each individual was estimated. The area of overlap for each individual among intra-capture sites and inter-capture sites was calculated for the entire year and for each season. Our results showed that the movement patterns of these deer were classified not only as resident but also as seasonal migration, dispersal, and atypical. Approximately one-third of the individuals moved into and out of the wetland during the year as either seasonal migrants or individuals with atypical movement. Some of the individuals migrated to farmland areas outside the wetland (the farthest being 69.9 km away). Half of the individuals inhabited the wetland all or most of the year, i.e., 81-100% of their annual home range was within the wetland area. Even among individuals captured at the same site, different seasonal movement patterns were identified. The overlap areas of the home ranges of individuals from the same capture sites were larger than those for individuals from different capture sites (e.g., mean of annual home range overlap with intra-capture sites: 47.7% vs. inter-sites: 1.3%). To achieve more effective ecosystem management including deer management in the wetland, management plans should cover inside and outside of the wetland and separate the population into multiple management units to address the different movement patterns and wetland utilization of the population.
Molecular Identification, Fatty Acid Profile and Trace Elements in a Stranded Fin Whale in Sabah (Borneo, Malaysia): Implications on Migration Routes and Trophic Ecology of Southern Fin Whales

Madin J, Talaha NHM, Lal MTM, Ransangan J, Yoshida T, Gallagher JB

Zool Stud, 2022;61:e79.
PMID: 37007816 DOI: 10.6620/ZS.2022.61-79

Fin whales are a cosmopolitan species found in the largest water masses of the world. In Malaysia, as well as other tropical countries in the Southeast Asian region, literature on fin whales is limited, and as a result, there is confusion regarding their distribution range in the region. This study utilizes the fresh tissue of the skin and blubber of a dead fin whale that was stranded in Sabah (Borneo, Malaysia) on the coast of the South China Sea to confirm the species identity, possible properties of the species' diet, and any trace element contamination. The DNA profile results confirmed that the whale belonged to Balaenoptera physalus. Further investigation of its cytochrome b gene sequence indicated that it was closely related to the southern fin whale (Balaenoptera physalus quoyi). This finding indicates that fin whales indeed migrate to warm tropical waters and that their continuous global distribution spans the equatorial region. The dominant fatty acids, such as C18:0, C16:1, C18:1N9T and C16:0 profiles, were consistent with the pelagic plankton diet that the whale would have had during its migration in the tropical waters of the South China Sea. The whales are likely pelagic feeders and thus need to be offshore, which would explain why they are rarely seen in shallow coastal areas during migration in these waters. The concentrations of K, Ca, Sc, Mg and Al ranged from 0.45 μg g-1 to 7.80 μg g-1, while Cr, Cd, As and Pb were either very low or could not be detected. This is consistent with concentrations of trace elements previously reported for other baleen whale genera from the Southern Ocean. Our study demonstrates the importance of the South China Sea as a migration route for the southern fin whale, since it is a rich food source with relatively low contaminant levels. The South China Sea is therefore well-suited to ensure these whales' survival during migration.
Effect of monsoon on microplastic bioavailability and ingestion by zooplankton in tropical coastal waters of Sabah

Tang CN, Kuwahara VS, Leong SCY, Moh PY, Yoshida T

Mar Pollut Bull, 2023 Aug;193:115182.
PMID: 37352797 DOI: 10.1016/j.marpolbul.2023.115182

Plankton seasonality in tropical coastal waters is becoming more apparent as a result of monsoon-driven changes in environmental conditions, but research on the monsoonal variation of microplastics (MP) is still limited. We examined the monsoonal variation of MP in the water column and their ingestion by zooplankton in Sepanggar Bay, Sabah, Malaysia. MP concentrations were significantly higher during the Southwest monsoon whereas MP ingestions showed no monsoonal difference across major zooplankton taxa. Canonical Correspondence Analysis (CCA) and Generalized Additive Models (GAM) indicate that MP concentrations were driven by changes in rainfall and salinity while MP bioavailability to zooplankton was consistent regardless of monsoon. MP ingestion increased progressively up the planktonic food chain, and bioavailability of fibers and small-sized MP of high-density polymers to zooplankton was proportionately higher. Distinct changes in the MP concentration relative to the monsoons provide new insights into the seasonal variation of MP in tropical coastal ecosystems.
Investigating the phenotypic and genetic associations between personality traits and suicidal behavior across major mental health diagnoses

Kalman JL, Yoshida T, Andlauer TFM, Schulte EC, Adorjan K, Alda M, et al.

Eur Arch Psychiatry Clin Neurosci, 2022 Dec;272(8):1611-1620.
PMID: 35146571 DOI: 10.1007/s00406-021-01366-5

Personality traits influence risk for suicidal behavior. We examined phenotype- and genotype-level associations between the Big Five personality traits and suicidal ideation and attempt in major depressive, bipolar and schizoaffective disorder, and schizophrenia patients (N = 3012) using fixed- and random-effects inverse variance-weighted meta-analyses. Suicidal ideations were more likely to be reported by patients with higher neuroticism and lower extraversion phenotypic scores, but showed no significant association with polygenic load for these personality traits. Our findings provide new insights into the association between personality and suicidal behavior across mental illnesses and suggest that the genetic component of personality traits is unlikely to have strong causal effects on suicidal behavior.
Fulltext Global Impact of COVID-19 on Stroke Care and IV Thrombolysis

Nogueira RG, Qureshi MM, Abdalkader M, Martins SO, Yamagami H, Qiu Z, et al.

Neurology, 2021 Jun 08;96(23):e2824-e2838.
PMID: 33766997 DOI: 10.1212/WNL.0000000000011885

OBJECTIVE: To measure the global impact of COVID-19 pandemic on volumes of IV thrombolysis (IVT), IVT transfers, and stroke hospitalizations over 4 months at the height of the pandemic (March 1 to June 30, 2020) compared with 2 control 4-month periods.
METHODS: We conducted a cross-sectional, observational, retrospective study across 6 continents, 70 countries, and 457 stroke centers. Diagnoses were identified by their ICD-10 codes or classifications in stroke databases.
RESULTS: There were 91,373 stroke admissions in the 4 months immediately before compared to 80,894 admissions during the pandemic months, representing an 11.5% (95% confidence interval [CI] -11.7 to -11.3, p < 0.0001) decline. There were 13,334 IVT therapies in the 4 months preceding compared to 11,570 procedures during the pandemic, representing a 13.2% (95% CI -13.8 to -12.7, p < 0.0001) drop. Interfacility IVT transfers decreased from 1,337 to 1,178, or an 11.9% decrease (95% CI -13.7 to -10.3, p = 0.001). Recovery of stroke hospitalization volume (9.5%, 95% CI 9.2-9.8, p < 0.0001) was noted over the 2 later (May, June) vs the 2 earlier (March, April) pandemic months. There was a 1.48% stroke rate across 119,967 COVID-19 hospitalizations. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection was noted in 3.3% (1,722/52,026) of all stroke admissions.
CONCLUSIONS: The COVID-19 pandemic was associated with a global decline in the volume of stroke hospitalizations, IVT, and interfacility IVT transfers. Primary stroke centers and centers with higher COVID-19 inpatient volumes experienced steeper declines. Recovery of stroke hospitalization was noted in the later pandemic months.

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