A survey was conducted at 100 different rice fields in coastal areas of West Malaysia to identify most common and prevalent weeds associated with rice. Fields surveyed were done according to the quantitative survey method by using 0.5m x 0.5m size quadrate with 20 samples from each field. A total of 53 different weed species belong to 18 families were identified of which 32 annual and 21 perennial; 12 grassy, 13 sedges and 28 broadleaved weeds. Based on relative abundance the most prevalent and abundant weed species were selected in the coastal rice field. Among the 10 most abundant weed species, there were four grasses viz. Echinochloa crusgalli, Leptochloo chinensis, Echinochloo colona, Oryza sotivo L. (weedy rice).; four sedges viz. Fimbristylis miliacea, Cyperus iria, Cyperus difformis, Scirpus grossus and two broadleaved weeds viz. Sphenocleo zeylonica, Jussiaea linifolio. Leptochloa chinensis, E. crusgalli, F. miliocea, E. colona were more prevalent and abundant species out of the 10 most dominant weed species in the coastal rice field of Peninsular Malaysia.
The influence of temperature, moisture and organic matter on the persistence of cyfluthrin was determined using three types of Malaysian soils, namely clay, clay loam and sandy clay loam obtained from a tomato farm in Cameron Highlands, Pahang. The persistence of cyfluthrin was observed in the laboratory at two temperature levels of 25 and 35 degreeC and field water capacity of 30 and 80%. Treated soil samples were incubated in a growth chamber for 1, 2, 3, 5, 7, 10, 14, 21 and 28 days. The results from the incubation studies showed that temperature and organic matter content significantly reduced the half-life (t1/2) values of cyfluthrin in the three soil types, but moisture content had very little effect. It was observed that cyfluthrin persisted longer at lower temperature and moisture content and higher organic matter content in all the three soil types. The present study demonstrated that under the tropical conditions of Malaysia, cyfluthrin dissipated rapidly in soils compared to its dissipation in soils of temperate regions, evidently due to high temperature.
Near-real-ime assay is anassay method that the whole process from sampling until results could be obtained in approximately Iess than one hour. The ElIman assay for acetyl cholinesterase (AChE) has near real-time potential due to its simplicity and fast assay time. The commercial acetylcholinesterase from Electrophorus electricus is well known for its uses in insecticides detection. A lesser known fact is AChE is also sensitive to heavy metals. A near real-time inhibitive assay for heavy metals using AChE from this source showed promising results. Several heavy metals such as copper, silver and mercury could be etected with IC50 values of1.212, 0.1185 and 0.097 mg I-1, respectively. The Limits of Detection (LOD) for copper, silver and mercury were 0.01, 0.015 and 0.01 mg I-1, respectively. TheLimits of quantitation (LOQ) or copper, silver and mercury were 0.196, 0.112 and 0.025 mg I-1, respectively. The LOQvalues for copper, silver and mercury were well below the maximum permissible limit for these metal ions as outlined by Malaysian Department of Environment. A polluted location demonstrated near real-time applicability of the assay with variation oftemporal levels of heavy metals detected. The results show that AChE from Electrophorus electricus has the potential to be used as a near real-time biomonitoring tool for heavy
MeSH terms: Acetylcholinesterase/metabolism*; Animals; Dithionitrobenzoic Acid/metabolism; Electrophorus/metabolism*; Environmental Monitoring/methods*; Malaysia; Spectrophotometry, Atomic; Water Pollutants, Chemical/analysis*; Metals, Heavy/analysis*; Limit of Detection
Environmental factors can play important roles in influencing waterbird communities. In particular, weather may have various biological and ecological impacts on the breeding activities of waterbirds, though most studies have investigated the effect of weather on the late stages of waterbird breeding (e.g., hatching rate, chick mortality). Conversely, the present study attempts to highlight the influence of weather on the early nesting activities of waterbirds by evaluating a recently established mixed-species colony in Putrajaya Wetlands, Malaysia. The results show that only rainfall and temperature have a significant influence on the species' nesting activities. Rainfall activity is significantly correlated with the Grey Heron's rate of establishment (rainfall: rs = 0.558, p = 0.03, n = 72) whereas both temperature and rainfall are associated with Painted Stork's nesting density (temperature: rs = 0.573, p = 0.013; rainfall: rs = -0.662, p = 0.03, n = 48). There is a possibility that variations in the rainfall and temperature provide a cue for the birds to initiate their nesting. Regardless, this paper addresses concerns on the limitations faced in the study and suggests long-term studies for confirmation.
Heterologous prime-boost immunisation strategies can evoke powerful antibody responses and may be of value in developing an improved malaria vaccine. Herein, we show that an immunisation protocol that primes Balb/c mice with a recombinant Bacille Calmette-Guérin (rBCG) vaccine consisting of a plasmid encoding a synthetic fragment of the ESAT-6 epitope of Mycobacterium tuberculosis, the fragment 2 region II of erythrocyte-binding antigen (F2RIIEBA) and the three repeat sequences of the circumsporozoite protein (NANP)3 of Plasmodium falciparum before subsequently boosting the mice with either two doses of the rBCG clone or with a DNA vaccine expressing the native form of F2RIIEBA generating higher serum anti-F2RIIEBA antibody levels than an immunisation protocol that calls for a homologous prime-boost with two doses of rBCG. These results demonstrate the potential of DNA vaccination in boosting the antibody response to a recombinant vaccine expressing multiple epitopes.
This paper aimed to describe the effects of sand mining on the Kelantan River with respect to physical and chemical parameter analyses. Three replicates of water samples were collected from five stations along the Kelantan River (November 2010 until February 2011). The physical parameters included water temperature, water conductivity, dissolved oxygen (DO), pH, total dissolved solids (TDS), total suspended solids (TSS) and turbidity, whereas the chemical parameters included the concentration of nitrogen nutrients such as ammonia, nitrate and nitrite. The Kelantan River case study revealed that TSS, turbidity and nitrate contents exceed the Malaysian Interim National Water Quality Standard (INWQS) range and are significantly different between Station 1 (KK) and Station 3 (TM). Station 1 has the largest variation of TDS, TSS, turbidity and nitrogen nutrients because of sand mining and upstream logging activities. The extremely high content of TSS and the turbidity have caused poor and stressful conditions for the aquatic life in the Kelantan River.
The distribution of benthic Foraminifera throughout the coastal waters of Taman Negara Pulau Pinang (Penang National Park), Malaysia was studied to assess the impact of various anthropogenic activities, such as fishing, ecotourism and floating cage culture. Samples were obtained at 200 m intervals within the subtidal zone, extending up to 1200 m offshore at Teluk Bahang, Teluk Aling, Teluk Ketapang and Pantai Acheh. The depth within coastal waters ranged between 1.5 m and 10.0 m, with predominantly muddy substrate at most stations. Water quality analysis showed little variation in micronutrient (nitrite, NO2; nitrate, NO3; ammonia, NH4 and orthophosphate, PO4) concentrations between sampling stations. Temperature (29.6±0.48°C), salinity (29.4±0.28 ppt), dissolved oxygen content (5.4±0.95 mg/l) and pH (8.5± 0.13) also showed little fluctuation between stations. A total of nine genera of foraminifera were identified in the study (i.e., Ammonia, Elphidium, Ammobaculites, Bigenerina, Quinqueloculina, Reopax, Globigerina, Textularia and Nonion). The distribution of benthic foraminifera was dominated by opportunistic groups that have a high tolerance to anthropogenic stressors. Ammonia had the highest frequency of occurrence (84.7%), followed by Bigenerina (50%), Ammobaculites (44.2%) and Elphidium (38.9%). The Ammonia-Elphidium Index (AEI) was used to describe the hypoxic condition of benthic communities at all sites. Teluk Bahang had the highest AEI value. The foraminiferal assemblages and distribution in Teluk Bahang, Teluk Aling, Teluk Ketapang and Pantai Acheh showed no correlation with physical or chemical environmental parameters.
In this study, Centella asiatica and surface soils were collected from 12 sampling sites in Peninsular Malaysia, and the barium (Ba) concentrations were determined. The Ba concentration [μg/g dry weight (dw)] was 63.72 to 382.01 μg/g in soils while in C. asiatica, Ba concentrations ranged from 5.05 to 21.88 μg/g for roots, 3.31 to 11.22 μg/g for leaves and 2.37 to 6.14 μg/g for stems. In C. asiatica, Ba accumulation was found to be the highest in roots followed by leaves and stems. The correlation coefficients (r) of Ba between plants and soils were found to be significantly positively correlated, with the highest correlation being between roots-soils (r=0.922, p<005), followed by leaves-soils (r=0.890, p<005) and stems-soils (r=0.848, p<005). This indicates that these three parts of C. asiatica are good biomonitors of Ba pollution. For the transplantation study, four sites were selected as unpolluted [(Universiti Putra Malaysia (UPM)], semi-polluted (Seri Kembangan and Balakong) and polluted sites (Juru). Based on the transplantation study under experimental field and laboratory conditions, Ba concentrations in C. asiatica were significantly (p<0.05) higher after three weeks of exposure at Seri Kembangan, Balakong and Juru. Thus, these experimental findings confirm that the leaves, stems and roots of C. asiatica can reflect the Ba levels in the soils where this plant is found. Three weeks after back transplantation to clean soils, the Ba levels in C. asiatica were still higher than the initial Ba level even though Ba elimination occurred. In conclusion, the leaves, stems and roots of C. asiatica are good biomonitors of Ba pollution.
A total of 34 bacterial isolates were obtained from soil samples collected from Changar Hot Spring, Malang, Indonesia. Of these, 13 isolates produced a zone of hydrolysis in starch-nutrient agar medium and generated various amylases in liquid medium. One isolate was selected as the best amylase producer and was identified as Bacillus licheniformis BT5.9. The improvement of culture conditions (initial medium pH of 5.0, cultivation temperature of 50°C, agitation speed of 100 rpm and inoculum size of 1.7 × 10(9) cells/ml) provided the highest amylase production (0.327 U/ml).
Staphylococcus kloosii, an orange pigment-producing bacterium, was isolated from the respiratory tree of Holothuria (Mertensiothuria) leucospilota (Brandt 1835) from Teluk Nipah, Pangkor Island, Perak, Malaysia. This report is the first documentation of this Gram-positive strain, referred to as Strain 68 in Malaysia. A partial 16S ribosomal RNA gene sequence of the mesophilic strain has been registered with GenBank (National Center for Biotechnology Information, US National Library of Medicine) with accession number JX102547. Phylogenetic analysis using the neighbour-joining method further supported the identification of Strain 68 as S. kloosii. The circular strain produced orange pigments on tryptone glucose yeast extract agar (TGYEA) and in nutrient broth (NB) at approximately pH 7. The visible spectra of ethanolic and methanolic pigment extracts of the bacterial strain were considered identical with λmax at 426, 447 and 475 nm and λmax at 426, 445 and 473 nm, respectively. Both visible spectra resemble the visible spectra of lutein, which is a commercial carotenoid; however, further analyses are required to confirm the identity of this pigment. The methanolic extracts of the intracellular pigments comprised at least three pigment compounds: an orange pigment compound (major compound), a yellow pigment compound (the least polar) and a pink pigment compound (the most polar). These findings are the first documentation of the pigment composition of S. kloosii as no such record could be found to date.
MeSH terms: Agar; Methanol; Animals; Carotenoids; Glucose; Malaysia; National Library of Medicine (U.S.); Phylogeny; Pigmentation; United States; Lutein; Genes, rRNA; Databases, Nucleic Acid; Holothuria
Fruit phenotypes are often hypothesised to be affected by selection by frugivores. Here, we tested two hypotheses concerning frugivore-fruit interactions from the perspective of fruit colours. We measured the spectral properties of 26 fruits and the associated leaves of plants from 2 islands in New Zealand. Visual observations were also performed to record the birds that fed on the fruits. First, we tested the fruit-foliage hypothesis, where fruit colours are assumed to be evolutionarily constrained by their own leaf colour to maximise colour contrast and fruit conspicuousness. We ran a null model analysis comparing fruit colour contrast using an avian eye model. Second, we tested the frugivore specificity hypothesis, where specific fruit colours are thought to be connected with a specific bird frugivore. We performed a regression on the number of bird visits against the fruit colour in tetrahedral colour space based on an avian eye calculation using Mantel's test. The results show that fruit colours are not constrained by their own leaf colours. There is also no relationship or pattern suggesting a link between a specific fruit colour and specific bird visitors. We suggest that although fruit colour is one of the most highly discussed components, it is not the most important single deciding factor in frugivore fruit selection.
Taman Negara Pulau Pinang (Penang National Park) is the only site on Pulau Pinang that supports a large population of the White-bellied Sea-eagle (WBSE) Haliaeetus leucogaster; however, the nesting sites of WBSEs have not been widely studied. As information on the location of WBSE nesting sites is very important for conservation works by local authorities, the objective of this study was to determine the distribution of nesting WBSEs in the coastal dipterocarp forest of Penang National Park. Surveys were conducted from December 2007 to July 2008 and October 2008 to April 2009, covering the breeding season of the species (September-July). The nesting sites were observed by boat along the coastline of Penang National Park and by performing ground surveys along the seashore at accessible areas; the nest survey was conducted three days/month from 0900 to 1500. A total of 34 WBSE nesting sites was located. Most of the occupied nests (seven nests) were found at Muka Head and Pantai Kerachut areas, which exhibit the densest concentration of occupied WBSE habitat in Penang National Park. WBSEs preferred to build their nests around Muka Head, which could be due to the frequent occurrence of whirlpools in the water body around that area. Aquatic animals, such as sea snakes and fish, stunned by the whirlpools would emerge to the sea surface, facilitating the foraging and feeding of WBSEs. Our results indicate that it is important to maintain and improve areas of suitable nesting habitat for WBSEs. Management actions should include (1) the yearly monitoring of known breeding sites throughout Penang National Park during the breeding season to determine breeding success over time, (2) recognising the critical habitat or nest-site selection of WBSEs, (3) establishment of a buffer zone surrounding nesting sites and potential habitat from human disturbance, and (4) encouraging on-going research to further understand this species.
Three Malaysian ginger cultivars (Bukit Tinggi, Tanjung Sepat and Sabah) were collected and examined for genetic polymorphisms using microsatellite DNA primers. The single microsatellite oligonucleotide primers (CATA)5, (GATA)5 and (GAC)6 were used in polymerase chain reactions (PCRs). These PCR reactions produced 7 polymorphic bands with an average of 2.334 polymorphic bands per primer, leading to an average polymorphism rate of 17.9%. Cluster analysis revealed 87.50% similarity between Bukit Tinggi and Tanjung Sepat, 64.27% similarity between Bukit Tinggi and Sabah and 56.25% similarity between Tanjung Sepat and Sabah. DNA sequencing of the polymorphic PCR products of Tanjung Sepat ginger revealed the characteristic features of a putative new gene: a core promoter sequence, an enhancer and a transcription start site. Cluster analysis using the unweighted pair group method with arithmetic average (UPGMA) was used to construct a phylogenetic tree, which indicated that Bukit Tinggi ginger is genetically more closely related to Tanjung Sepat ginger than to Sabah ginger. Based on the results of this study, we concluded that there is genotypic variation among ginger cultivars, and the microsatellite DNA primers described here are useful for detecting polymorphic DNA in Malaysian ginger cultivars. Additionally, these microsatellite DNA primers may be used as molecular markers for discriminating among select Malaysian ginger cultivars.
The mass mortality of cobia (Rachycentron canadum) within 2-3 days was reported by 3 private farms in Bukit Tambun, Pulau Pinang, in February and March 2007. Only cobia with body weights of 3-4 kg were affected. Most diseased cobia swam on the surface and displayed flashing behaviour. All samples were positive for viral nervous necrosis (VNN) with low to medium levels of infection. Infestations by leeches (Zeylanicobdella arugamensis), body monogeneans (Benedenia sp.) and copepods (Caligus sp.) were also found, but no pathogenic bacteria were isolated. All water quality parameters monitored were within optimal ranges for culturing cobia. The main causes of high mortality in cobia remain unclear during the study. However, we believe that the mass mortality of cobia could be probably due to VNN infection and that the rate of mortality will increase further when cobia are subjected to aquaculture-related stresses (e.g., limited space). Traditional cages with a size of 2 (length) × 2 (width) × 1 m (depth) should only be used for rearing cobia below 1 kg in weight given the species' natural behaviours. In addition, cobia fingerlings should be screened for VNN prior to stocking them in cages.
MeSH terms: Animals; Bacteria; Body Weight; Leeches; Perciformes; Aquaculture; Nodaviridae; Copepoda; Water Quality
Fungal endophytes are found inside host plants but do not produce any noticeable disease symptoms in their host. In the present study, endophytic Fusarium species were isolated from roots of lawn grass (Axonopus compressus). A total of 51 isolates were recovered from 100 root segments. Two Fusarium species, F. oxysporum (53%) and F. solani (47%), were identified based on macroconidia and conidiogenous cell morphology. The detection of endophytic F. oxysporum and F. solani in the roots of lawn grass contributes to the knowledge of both the distribution of the two Fusarium species and the importance of roots as endophytic niches for Fusarium species.
Nine soil samples from nine buildings infested with Coptotermes gestroi in Pulau Pinang, Malaysia, were tested for the type of soil texture. The soil texture analysis procedures used the hydrometer method. Four of nine buildings (44%) yielded loamy sand-type soil, whereas five of nine buildings (56%) contained sandy loam-type soil.
The major hemorrhagin from C. purpureomaculatus (mangrove pit viper) venom was purified to homogeneity and termed Maculatoxin. Maculatoxin has a molecular weight of 38 kDa as determined by SDS-PAGE. It is an acidic protein (pI= 4.2) and exhibited proteolytic and hemorrhagic activities (MHD10 = 0.84 microg in mice) but was not lethal to mice at a dose of 1 microg/g. The hemorrhagic activity of Maculatoxin was completely inactivated by EDTA and partially inhibited by ATP and citrate. The N-terminal sequence of Maculatoxin (TPEQQRFPPTYIDLGIFVDHGMYAT) shares a significant degree of homology with the metalloprotease domain of other venom hemorrhagins. Indirect ELISA showed anti-Maculatoxin cross reacted with protein components of many snake venoms. In the double-sandwich ELISA, however, anti-Maculatoxin cross-reacted only with venoms of certain species of the Trimeresurus (Asia lance-head viper) complex, and the results support the recent proposed taxonomy changes concerning the Trimeresurus complex.
Mother-offspring interaction begins before birth. The foetus is particularly vulnerable to environmental insults and stress. The body responds by releasing excess of the stress hormone cortisol, which acts on glucocorticoid receptors. Hippocampus in the brain is rich in glucocorticoid receptors and therefore susceptible to stress. The stress effects are reduced when the animals are placed under a model wooden pyramid. The present study was to first explore the effects of prenatal restraint-stress on the plasma corticosterone levels and the dendritic arborisation of CA3 pyramidal neurons in the hippocampus of the offspring. Further, to test whether the pyramid environment would alter these effects, as housing under a pyramid is known to reduce the stress effects, pregnant Sprague Dawley rats were restrained for 9 h per day from gestation day 7 until parturition in a wire-mesh restrainer. Plasma corticosterone levels were found to be significantly increased. In addition, there was a significant reduction in the apical and the basal total dendritic branching points and intersections of the CA3 hippocampal pyramidal neurons. The results thus suggest that, housing in the pyramid dramatically reduces prenatal stress effects in rats.
Microwave heating is one of the most attractive cooking methods for food preparation, commonly employed in households and especially in restaurants for its high speed and convenience. The chemical constituents of oils that degrade during microwave heating do so at rates that vary with heating temperature and time in a similar manner to other type of processing methods. The rate of quality characteristics of the oil depends on the fatty acid composition and the minor components during heating. Addition of oxidative-stable palm olein (PO) to heat sensitive canola oil (CO), may affect the quality characteristics of CO during microwave heating. The aim of this study was to evaluate how heat treatments by microwave oven affect the quality of CO in presence of PO.
MeSH terms: Cooking/methods; Fatty Acids, Monounsaturated/chemistry*; Hot Temperature/adverse effects*; Microwaves/adverse effects*; Oxidation-Reduction; Plant Oils/chemistry*; Time Factors
Interpenetrating polymer network hydrogel beads of pectin and sodium carboxymethyl xanthan were prepared by ionotropic gelation with Al(+3) ions and covalent cross-linking with glutaraldehyde for sustained delivery of diltiazem hydrochloride. Fourier transform infrared spectroscopy, X-ray diffraction, differential scanning colorimetry and scanning electron microscopy were used to characterise the hydrogel beads. The swelling of the hydrogel and the release of drug were relatively low in pH 1.2 buffer solutions. However, higher swelling and drug release were observed in pH 6.8 buffer solutions. The carboxyl functional groups of hydrogels undergo ionisation and the osmotic pressure inside the beads increases resulting in higher swelling and drug release in higher pH. The release of drug depends on concentration of polymer, amount and exposure time of cross-linker and drug content in the hydrogel matrices. The present study indicated that the hydrogel beads minimised the drug release in pH 1.2 buffer solutions and to prolong the drug release in pH 6.8 buffer solutions.