Browse publications by year: 2013

  1. Ataie-Jafari A, Loke SC, Rahmat AB, Larijani B, Abbasi F, Leow MK, et al.
    Clin Nutr, 2013 Dec;32(6):911-7.
    PMID: 23395257 DOI: 10.1016/j.clnu.2013.01.012
    This participant-blinded parallel-group randomized placebo-controlled study demonstrated that alfacalcidol (vitamin D analogue) preserves beta cell function in newly diagnosed type 1 diabetes (T1DM) in children.
    MeSH terms: Adolescent; Blood Glucose/metabolism; Body Weight/drug effects; C-Peptide/blood; Calcium, Dietary/administration & dosage; Calcium, Dietary/blood; Child; Diabetes Mellitus, Type 1/blood; Diabetes Mellitus, Type 1/drug therapy*; Dose-Response Relationship, Drug; Female; Follow-Up Studies; Humans; Hydroxycholecalciferols/administration & dosage*; Hydroxycholecalciferols/blood; Hypercalcemia/blood; Hypercalcemia/drug therapy; Insulin/administration & dosage; Insulin/blood; Male; Multivariate Analysis; Linear Models; Single-Blind Method; Insulin-Secreting Cells/drug effects*; Insulin-Secreting Cells/metabolism
  2. Shahrizaila N, Goh KJ, Abdullah S, Kuppusamy R, Yuki N
    Clin Neurophysiol, 2013 Jul;124(7):1456-9.
    PMID: 23395599 DOI: 10.1016/j.clinph.2012.12.047
    Recent studies have advocated the use of serial nerve conduction studies (NCS) in the electrodiagnosis of Guillain-Barré syndrome (GBS). The current study aims to elucidate when and how frequent NCS can be performed to reflect the disease pathophysiology.
    MeSH terms: Adolescent; Adult; Aged; Aged, 80 and over; Electrodiagnosis; Enzyme-Linked Immunosorbent Assay; Female; Gangliosides/blood; Humans; Male; Middle Aged; Neural Conduction/drug effects; Neural Conduction/physiology*; Retrospective Studies; Time Factors; Reproducibility of Results; Immunoglobulins, Intravenous/therapeutic use; Guillain-Barre Syndrome/blood; Guillain-Barre Syndrome/diagnosis*; Guillain-Barre Syndrome/drug therapy; Guillain-Barre Syndrome/physiopathology*; Young Adult
  3. Olutoye MA, Hameed BH
    Bioresour Technol, 2013 Mar;132:103-8.
    PMID: 23395762 DOI: 10.1016/j.biortech.2012.12.171
    An active heterogeneous Al2O3 modified MgZnO (MgZnAlO) catalyst was prepared and the catalytic activity was investigated for the transesterification of different vegetable oils (refined palm oil, waste cooking palm oil, palm kernel oil and coconut oil) with methanol to produce biodiesel. The catalyst was characterized by using X-ray diffraction, Fourier transform infrared spectra, thermo gravimetric and differential thermal analysis to ascertain its versatility. Effects of important reaction parameters such as methanol to oil molar ratio, catalyst dosage, reaction temperature and reaction time on oil conversion were examined. Within the range of studied variability, the suitable transesterification conditions (methanol/oil ratio 16:1, catalyst loading 3.32 wt.%, reaction time 6h, temperature 182°C), the oil conversion of 98% could be achieved with reference to coconut oil in a single stage. The catalyst can be easily recovered and reused for five cycles without significant deactivation.
    MeSH terms: Aluminum Oxide/chemistry*; Biotechnology/methods*; Catalysis; Esterification/physiology*; Plant Oils/chemistry*; Thermogravimetry; X-Ray Diffraction; Spectroscopy, Fourier Transform Infrared; Ferrosoferric Oxide/chemistry*; Biofuels*
  4. Salleh MH, Glidle A, Sorel M, Reboud J, Cooper JM
    Chem Commun (Camb), 2013 Apr 18;49(30):3095-7.
    PMID: 23396529 DOI: 10.1039/c3cc38228a
    We demonstrate a polymer resonator microfluidic biosensor that overcomes the complex manufacturing procedures required to fabricate traditional devices. In this new format, we show that a gapless light coupling photonic configuration, fabricated in SU8 polymer, can achieve high sensitivity, label-free chemical sensing in solution and high sensitivity biological sensing, at visible wavelengths.
    MeSH terms: Polymers/chemistry*; Optics and Photonics
  5. Wu YH, Cheong LC, Meon S, Lau WH, Kong LL, Joseph H, et al.
    Arch Virol, 2013 Jun;158(6):1407-10.
    PMID: 23397332 DOI: 10.1007/s00705-013-1624-8
    A 246-nt variant of Coconut cadang-cadang viroid (CCCVd) has been identified and described from oil palms with orange spotting symptoms in Malaysia. Compared with the 246-nt form of CCCVd from coconut, the oil palm variant substituted C(31)→U in the pathogenicity domain and G(70)→C in the central conserved domain. This is the first sequence reported for a 246-nt variant of CCCVd in oil palms expressing orange spotting symptoms.
    MeSH terms: Base Sequence; Cocos/virology*; Malaysia/epidemiology; Molecular Sequence Data; Plant Diseases/virology*; Genetic Variation; Viroids/genetics*; Point Mutation/genetics
  6. Dahaban NM, Romli MF, Roslan NR, Kong SS, Cheah FC
    Breastfeed Med, 2013 Aug;8(4):422-3.
    PMID: 23398139 DOI: 10.1089/bfm.2012.0109
    MeSH terms: Bacteria/isolation & purification*; Bacteria/pathogenicity; Breast Feeding/adverse effects*; Female; Humans; Hygiene/standards*; Infant; Infant, Premature; Malaysia/epidemiology; Milk, Human/microbiology*
  7. Soh KL, Davidson PM, Leslie G, DiGiacomo M, Soh KG
    J Clin Nurs, 2013 Mar;22(5-6):856-65.
    PMID: 23398314 DOI: 10.1111/jocn.12017
    To describe nurses' perceptions of evidence-based recommendations to prevent complications in a Malaysian intensive care unit.
    MeSH terms: Adult; Pressure Ulcer/prevention & control*; Humans; Intensive Care Units*; Malaysia; Nursing Assessment*; Nursing Staff, Hospital/psychology*; Focus Groups; Sepsis/prevention & control*; Pneumonia, Ventilator-Associated/prevention & control*
  8. Abu A, Susan LL, Sidhu AS, Dhillon SK
    BMC Bioinformatics, 2013;14:48.
    PMID: 23398696 DOI: 10.1186/1471-2105-14-48
    Digitised monogenean images are usually stored in file system directories in an unstructured manner. In this paper we propose a semantic representation of these images in the form of a Monogenean Haptoral Bar Image (MHBI) ontology, which are annotated with taxonomic classification, diagnostic hard part and image properties. The data we used are basically of the monogenean species found in fish, thus we built a simple Fish ontology to demonstrate how the host (fish) ontology can be linked to the MHBI ontology. This will enable linking of information from the monogenean ontology to the host species found in the fish ontology without changing the underlying schema for either of the ontologies.
    MeSH terms: Animals; Fishes/anatomy & histology*; Fishes/classification; Image Processing, Computer-Assisted/methods*; Semantics; Vocabulary, Controlled; Knowledge Bases
  9. Kashif M, Ali ME, Ali SM, Hashim U, Hamid SB
    Nanoscale Res Lett, 2013;8(1):68.
    PMID: 23399029 DOI: 10.1186/1556-276X-8-68
    ZnO nanorods were synthesized using a low-cost sol-gel spin coating technique. The synthesized nanorods were consisted of hexagonal phase having c-axis orientation. SEM images reflected perpendicular ZnO nanorods forming bridging network in some areas. The impact of different hydrogen concentrations on the Pd-sensitized ZnO nanorods was investigated using an impedance spectroscopy (IS). The grain boundary resistance (Rgb) significantly contributed to the sensing properties of hydrogen gas. The boundary resistance was decreased from 11.95 to 3.765 kΩ when the hydrogen concentration was increased from 40 to 360 ppm. IS gain curve showed a gain of 6.5 for 360 ppm of hydrogen at room temperature. Nyquist plot showed reduction in real part of impedance at low frequencies on exposure to different concentrations of hydrogen. Circuit equivalency was investigated by placing capacitors and resistors to identify the conduction mechanism according to complex impedance Nyquist plot. Variations in nanorod resistance and capacitance in response to the introduction of various concentrations of hydrogen gas were obtained from the alternating current impedance spectra.
  10. Sahari J, Sapuan SM, Zainudin ES, Maleque MA
    Carbohydr Polym, 2013 Feb 15;92(2):1711-6.
    PMID: 23399210 DOI: 10.1016/j.carbpol.2012.11.031
    In recent years, increasing environmental concerns focused greater attention on the development of biodegradable materials. A thermoplastic starch derived from bioresources, sugar palm tree was successfully developed in the presence of biodegradable glycerol as a plasticizer. Sugar palm starch (SPS) was added with 15-40 w/w% of glycerol to prepare workable bioplastics and coded as SPS/G15, SPS/G20, SPS/G30 and SPS/G40. The samples were characterized for thermal properties, mechanical properties and moisture absorption on exposure to humidity were evaluated. Morphological studies through scanning electron microscopy (SEM) were used to explain the observed mechanical properties. Generally, the addition of glycerol decrease the transition temperature of plasticized SPS. The mechanical properties of plasticized SPS increase with the increasing of glycerol but up to 30 w/w%. Meanwhile, the water absorption of plasticized SPS decrease with increasing of glycerol.
    MeSH terms: Absorption; Glycerol/chemistry; Plastics/chemistry*; Starch/chemistry*; Temperature*; Water/chemistry; Angiosperms/chemistry*; Mechanical Processes*
  11. Zainuddin SY, Ahmad I, Kargarzadeh H, Abdullah I, Dufresne A
    Carbohydr Polym, 2013 Feb 15;92(2):2299-305.
    PMID: 23399291 DOI: 10.1016/j.carbpol.2012.11.106
    Biodegradable materials made from cassava starch and kenaf fibers were prepared using a solution casting method. Kenaf fibers were treated with NaOH, bleached with sodium chlorite and acetic buffer solution, and subsequently acid hydrolyzed to obtain cellulose nanocrystals (CNCs). Biocomposites in the form of films were prepared by mixing starch and glycerol/sorbitol with various filler compositions (0-10 wt%). X-ray diffraction revealed that fiber crystallinity increased after each stage of treatment. Morphological observations and size reductions of the extracted cellulose and CNCs were studied using field emission scanning electron microscopy and transmission electron microscopy. The effects of different treatments and filler contents of the biocomposites were evaluated through mechanical tests. Results showed that the tensile strengths and moduli of the biocomposites increased after each treatment and the optimum filler content was 6%.
    MeSH terms: Manihot/chemistry*; Cellulose/chemistry; Hydrolysis; Plastics/chemistry; Starch/chemistry*; Temperature; Tensile Strength; Hibiscus/chemistry*; Nanoparticles/chemistry
  12. Sow YL, Aziz NA, Ng KL
    Am J Emerg Med, 2013 Apr;31(4):760.e3-5.
    PMID: 23399341 DOI: 10.1016/j.ajem.2012.12.005
    Rupture of the thyroid gland is uncommon in cases of blunt neck trauma. We report a case of thyroid rupture after a motor vehicle accident in a patient without a preexisting goiter. He presented with a painful anterior neck swelling associated with dysphagia and hoarseness of voice. Computed tomographic scans showed lacerations of the right thyroid lobe and isthmus with features suggestive of slow active bleeding. Neck exploration was subsequently performed, and a ruptured right thyroid lobe was found with ongoing venous hemorrhage. A right hemithyroidectomy was performed, and the patient recovered without complications.
    MeSH terms: Accidents, Traffic; Adult; Humans; Male; Motorcycles; Rupture; Thyroid Gland/injuries*; Tomography, X-Ray Computed; Wounds, Nonpenetrating/complications; Neck Injuries/complications*; Neck Injuries/radiography; Neck Injuries/surgery
  13. Rada EC, Ragazzi M, Fedrizzi P
    Waste Manag, 2013 Apr;33(4):785-92.
    PMID: 23402896 DOI: 10.1016/j.wasman.2013.01.002
    Municipal solid waste management is a multidisciplinary activity that includes generation, source separation, storage, collection, transfer and transport, processing and recovery, and, last but not least, disposal. The optimization of waste collection, through source separation, is compulsory where a landfill based management must be overcome. In this paper, a few aspects related to the implementation of a Web-GIS based system are analyzed. This approach is critically analyzed referring to the experience of two Italian case studies and two additional extra-European case studies. The first case is one of the best examples of selective collection optimization in Italy. The obtained efficiency is very high: 80% of waste is source separated for recycling purposes. In the second reference case, the local administration is going to be faced with the optimization of waste collection through Web-GIS oriented technologies for the first time. The starting scenario is far from an optimized management of municipal solid waste. The last two case studies concern pilot experiences in China and Malaysia. Each step of the Web-GIS oriented strategy is comparatively discussed referring to typical scenarios of developed and transient economies. The main result is that transient economies are ready to move toward Web oriented tools for MSW management, but this opportunity is not yet well exploited in the sector.
    MeSH terms: China; Italy; Malaysia; Internet
  14. Bin Abdul Rashid SN, Rahim AS, Thali MJ, Flach PM
    Forensic Sci Med Pathol, 2013 Mar;9(1):82-7.
    PMID: 23404531 DOI: 10.1007/s12024-012-9395-1
    Fatal acute methamphetamine (MA) poisoning in cases of internal drug trafficking is rarely described in the literature. This case study reports an MA 'body packer' who died from fatal methamphetamine intoxication due to leaking drug packages in the alimentary tract. The deceased was examined by postmortem computed tomography (PMCT), and the results were correlated to subsequent autopsy and toxicological findings. The deceased was arrested by the police when he was found disoriented in the city of Kuala Lumpur. He was transferred to the emergency department on suspicion of drug abuse. The initial drug screening was reactive for amphetamines. Shortly after admission to the hospital, he died despite rigorous resuscitation attempts. The postmortem plain chest and abdominal radiographs revealed multiple suspicious opacities in the gastrointestinal tract attributable to body packages. An unenhanced whole body PMCT revealed twenty-five drug packages, twenty-four in the stomach and one in the transverse colon. At least two were disintegrating, and therefore leaking. The autopsy findings were consistent with the PMCT results. Toxicology confirmed the diagnosis of fatal methamphetamine intoxication.
    MeSH terms: Adult; Autopsy; Cause of Death; Crime*; Drug Packaging; Forensic Medicine/methods*; Humans; Intestinal Absorption; Male; Methamphetamine/blood; Methamphetamine/poisoning*; Poisoning/blood; Poisoning/pathology; Predictive Value of Tests; Street Drugs/blood; Street Drugs/poisoning*; Reproducibility of Results; Fatal Outcome; Gastrointestinal Tract/metabolism; Forensic Toxicology; Multidetector Computed Tomography*
  15. Chisholm LA
    Syst Parasitol, 2013 Mar;84(3):255-64.
    PMID: 23404761 DOI: 10.1007/s11230-013-9405-z
    Septesinus gibsoni n. g., n. sp. (Monocotylidae: Heterocotylinae) is described from the gills of the dwarf whipray Himantura walga (Müller & Henle) collected in marine waters off Sarawak (Borneo), Malaysia. Septesinus n. g. is distinguished from other genera in the Monocotylidae by a combination of characters, including a haptor with one central and seven peripheral loculi, the presence of a highly sinuous ridge surmounting all haptoral septa, four rounded accessory structures on the dorsal surface of the haptor, and the anterior region with two pairs of anteromedian and three pairs of anterolateral gland-duct openings. Septesinus n. g. is accommodated in the Heterocotylinae. Septesinus gibsoni n. sp. is described and fully illustrated, and a key to the genera of Heterocotylinae is provided. The composition of the ridges surrounding the mouth of a number of heterocotyline species and their usefulness as a taxonomic character are examined. The identity of four specimens of Monocotyle Taschenberg, 1878, also recovered from the gills of this host species, is discussed.
    MeSH terms: Animals; Borneo; Gills/parasitology; Skates (Fish)/parasitology*; Species Specificity; Trematoda/anatomy & histology*; Trematoda/classification*; Trematoda/cytology
  16. Low VL, Chen CD, Lim PE, Lee HL, Lim YA, Tan TK, et al.
    Pest Manag Sci, 2013 Dec;69(12):1362-8.
    PMID: 23404830 DOI: 10.1002/ps.3512
    Given that there is limited available information on the insensitive acetylcholinesterase in insect species in Malaysia, the present study aims to detect the presence of G119S mutation in the acetylcholinesterase gene of Culex quinquefasciatus from 14 residential areas across 13 states and a federal territory in Malaysia.
    MeSH terms: Acetylcholinesterase/genetics*; Acetylcholinesterase/metabolism; Animals; Culex/drug effects; Culex/enzymology*; Culex/genetics; Enzyme Inhibitors/pharmacology*; Female; Genotype; Insecticide Resistance*; Insecticides/pharmacology; Malathion/pharmacology*; Malaysia; Polymorphism, Restriction Fragment Length; Insect Proteins/antagonists & inhibitors; Insect Proteins/genetics*; Insect Proteins/metabolism; Mutation, Missense
  17. Vincent-Chong VK, Anwar A, Karen-Ng LP, Cheong SC, Yang YH, Pradeep PJ, et al.
    PLoS One, 2013;8(2):e54705.
    PMID: 23405089 DOI: 10.1371/journal.pone.0054705
    Despite the advances in diagnosis and treatment of oral squamous cell carcinoma (OSCC), mortality and morbidity rates have not improved over the past decade. A major drawback in diagnosis and treatment of OSCC is the lack of knowledge relating to how genetic instability in oral cancer genomes affects oral carcinogenesis. Hence, the key aim of this study was to identify copy number alterations (CNAs) that may be cancer associated in OSCC using high-resolution array comparative genomic hybridization (aCGH). To our knowledge this is the first study to use ultra-high density aCGH microarrays to profile a large number of OSCC genomes (n = 46). The most frequently amplified CNAs were located on chromosome 11q11(52%), 2p22.3(52%), 1q21.3-q22(54%), 6p21.32(59%), 20p13(61%), 7q34(52% and 72%),8p11.23-p11.22(80%), 8q11.1-q24.4(54%), 9q13-q34.3(54%), 11q23.3-q25(57%); 14q21.3-q31.1(54%); 14q31.3-q32.33(57%), 20p13-p12.3(54%) and 20q11.21-q13.33(52%). The most frequently deleted chromosome region was located on 3q26.1 (54%). In order to verify the CNAs from aCGH using quantitative polymerase chain reaction (qPCR), the three top most amplified regions and their associated genes, namely ADAM5P (8p11.23-p11.22), MGAM (7q34) and SIRPB1 (20p13.1), were selected in this study. The ADAM5P locus was found to be amplified in 39 samples and deleted in one; MGAM (24 amplifications and 3 deletions); and SIRPB1 (12 amplifications, others undetermined). On the basis of putative cancer-related annotations, two genes, namely ADAM metallopeptidase domain 9 (ADAM9) and maltase-glucoamylase alpha-glucosidase (MGAM), that mapped to CNA regions were selected for further evaluation of their mRNA expression using reverse transcriptase qPCR. The over-expression of MGAM was confirmed with a 6.6 fold increase in expression at the mRNA level whereas the fold change in ADAM9 demonstrated a 1.6 fold increase. This study has identified significant regions in the OSCC genome that were amplified and resulted in consequent over-expression of the MGAM and ADAM9 genes that may be utilized as biological markers for OSCC.
    MeSH terms: alpha-Glucosidases/biosynthesis*; alpha-Glucosidases/genetics; Carcinoma, Squamous Cell/enzymology; Carcinoma, Squamous Cell/genetics*; Chromosome Aberrations*; Humans; Membrane Proteins/biosynthesis*; Membrane Proteins/genetics; Mouth Mucosa/enzymology; Mouth Mucosa/pathology; Mouth Neoplasms/enzymology; Mouth Neoplasms/genetics*; RNA, Messenger/genetics; ADAM Proteins/biosynthesis*; ADAM Proteins/genetics; Genome-Wide Association Study/methods; DNA Copy Number Variations*
  18. Ng KP, Yew SM, Chan CL, Chong J, Tang SN, Soo-Hoo TS, et al.
    Genome Announc, 2013 Jan;1(1).
    PMID: 23405310 DOI: 10.1128/genomeA.00056-12
    The emergence of the global threat of extensively drug-resistant (XDR) Mycobacterium tuberculosis reveals weaknesses in tuberculosis management and diagnostic services. We report the draft genome sequence of the first extensively drug-resistant Mycobacterium tuberculosis strain isolated in Malaysia. The sequence was also compared against a reference strain to elucidate the polymorphism that is related to their extensive resistance.
    MeSH terms: Antitubercular Agents; Diagnostic Services; Malaysia; Mycobacterium tuberculosis; Tuberculosis
  19. Neoh HM, Mohamed-Hussein ZA, Tan XE, B Raja Abd Rahman RM, Hussin S, Mohamad Zin N, et al.
    Genome Announc, 2013 Jan;1(1).
    PMID: 23405328 DOI: 10.1128/genomeA.00103-12
    Here, we report the draft genome sequences of four nosocomial methicillin-resistant Staphylococcus aureus strains (PPUKM-261-2009, PPUKM-332-2009, PPUKM-377-2009, and PPUKM-775-2009) isolated from a university teaching hospital in Malaysia. Three of the strains belong to sequence type 239 (ST239), which has been associated with sustained hospital epidemics worldwide.
    MeSH terms: Cross Infection; Hospitals, Teaching; Hospitals, University; Malaysia; Methicillin; Universities; Methicillin-Resistant Staphylococcus aureus; Epidemics
  20. Choo SW, Wong YL, Beh CY, Lokanathan N, Leong ML, Ong CS, et al.
    Genome Announc, 2013 Jan;1(1).
    PMID: 23405341 DOI: 10.1128/genomeA.00063-12
    Mycobacterium abscessus is an emerging clinical pathogen commonly associated with non-tuberculous mycobacterial infections. We report herein the draft genome of M. abscessus strain M156.
    MeSH terms: Diagnostic Tests, Routine; Mycobacterium Infections, Nontuberculous; Nontuberculous Mycobacteria; Genome, Bacterial
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