Browse publications by year: 2013

  1. Yam YY, Hoh BP, Othman NH, Hassan S, Yahya MM, Zakaria Z, et al.
    Genet. Mol. Res., 2013;12(1):319-27.
    PMID: 23420356 DOI: 10.4238/2013.February.7.1
    Colorectal cancer is one of the most common cancers in many countries, including Malaysia. The accumulation of genomic alterations is an important feature of colorectal carcinogenesis. A better understanding of the molecular events underlying the stages of colorectal carcinogenesis might be helpful in the detection and management of the disease. We used a commercially available single-nucleotide polymorphism genotyping array to detect both copy number abnormalities (CNAs) and copy-neutral loss of heterozygosity (LOH) in sporadic colorectal carcinomas. Matched tumor and normal tissues of 13 colorectal carcinomas (Dukes' stages A-D) were analyzed using a 250K single nucleotide polymorphism array. An additional assay was performed to determine the microsatellite instability status by using the National Cancer Institute-recommended BAT-26 panel. In general, copy number gain (92.3%) was most common, followed by copy number loss (53.8%) and copy-neutral LOH (46.2%). Frequent CNAs of gains and losses were observed on chromosomes 7p, 8, 13q, 17p, 18q, and 20q, and copy-neutral LOH was observed on chromosomes 2, 6, 12, 13q, 14q, 17, 20p, 19q, and 22q. Even though genomic alterations are associated with colorectal cancer progression, our results showed that DNA CNAs and copy-neutral LOH do not reflect disease progression in at least 50% tumors. Copy-neutral LOH was observed in both early and advanced tumors, which favors the involvement of these genomic alterations in the early stages of tumor development.
    MeSH terms: Adult; Aged; Aged, 80 and over; Chromosome Aberrations*; Female; Genotype; Humans; Malaysia; Male; Middle Aged; Colorectal Neoplasms/genetics*; Disease Progression; Loss of Heterozygosity*; Polymorphism, Single Nucleotide; Asian Continental Ancestry Group/genetics*; Microsatellite Instability; DNA Copy Number Variations*
  2. Heh CH, Othman R, Buckle MJ, Sharifuddin Y, Yusof R, Rahman NA
    Chem Biol Drug Des, 2013 Jul;82(1):1-11.
    PMID: 23421589 DOI: 10.1111/cbdd.12122
    Various works have been carried out in developing therapeutics against dengue. However, to date, no effective vaccine or anti-dengue agent has yet been discovered. The development of protease inhibitors is considered as a promising option, but most previous works have involved competitive inhibition. In this study, we focused on rational discovery of potential anti-dengue agents based on non-competitive inhibition of DEN-2 NS2B/NS3 protease. A homology model of the DEN-2 NS2B/NS3 protease (using West Nile Virus NS2B/NS3 protease complex, 2FP7, as the template) was used as the target, and pinostrobin, a flavanone, was used as the standard ligand. Virtual screening was performed involving a total of 13 341 small compounds, with the backbone structures of chalcone, flavanone, and flavone, available in the ZINC database. Ranking of the resulting compounds yielded compounds with higher binding affinities compared with the standard ligand. Inhibition assay of the selected top-ranking compounds against DEN-2 NS2B/NS3 proteolytic activity resulted in significantly better inhibition compared with the standard and correlated well with in silico results. In conclusion, via this rational discovery technique, better inhibitors were identified. This method can be used in further work to discover lead compounds for anti-dengue agents.
    MeSH terms: Allosteric Regulation; Binding Sites; Dengue/drug therapy; Dengue Virus/enzymology*; Humans; Kinetics; Protease Inhibitors/pharmacology; Protease Inhibitors/therapeutic use; Protease Inhibitors/chemistry*; Recombinant Proteins/biosynthesis; Recombinant Proteins/genetics; Serine Endopeptidases/genetics; Serine Endopeptidases/metabolism; Tetrazoles/pharmacology; Tetrazoles/therapeutic use; Tetrazoles/chemistry*; Thermodynamics; Viral Nonstructural Proteins/antagonists & inhibitors*; Viral Nonstructural Proteins/genetics; Viral Nonstructural Proteins/metabolism; Protein Structure, Tertiary; RNA Helicases/antagonists & inhibitors; RNA Helicases/genetics; RNA Helicases/metabolism; Flavones/pharmacology; Flavones/therapeutic use; Flavones/chemistry*; Molecular Docking Simulation
  3. Gunarajah DR, Samman N
    J Oral Maxillofac Surg, 2013 Mar;71(3):550-70.
    PMID: 23422151 DOI: 10.1016/j.joms.2012.10.029
    To evaluate the reported use and outcomes of implant materials used for the restoration of post-traumatic orbital floor defects in adults.
    MeSH terms: Adult; Biocompatible Materials*; Cartilage/transplantation; Ceramics; Diplopia/etiology; Fascia/transplantation; Humans; Orbital Fractures/complications; Orbital Fractures/surgery*; Polyesters; Polyethylenes; Polyglycolic Acid; Titanium; Enophthalmos/etiology; Bone Transplantation; Polydioxanone; Orbital Implants*
  4. Ruqayyah TI, Jamal P, Alam MZ, Mirghani ME
    J Environ Manage, 2013 Mar 30;118:115-21.
    PMID: 23422153 DOI: 10.1016/j.jenvman.2013.01.003
    The degradation potential and ligninolytic enzyme production of two isolated Panus tigrinus strains (M609RQY and M109RQY) were evaluated in this study. These strains were grown on three selected abundant agro-industrial wastes (rice straw; rice husk and cassava peel) under solid-state fermentation conditions. Degradation potential was determined by analyzing the chemical composition of the selected substrates before and after fermentation along with ligninolytic enzyme production. The strain M609RQY led to the highest lignin degradation of 40.81% on cassava peel, 11.25% on rice husk and 67.96% on rice straw. Both strains significantly increased the protein content of cassava peel. Rice husk stimulated maximum laccase (2556 U/L) and lignin peroxidase (24 U/L) production by the strains M109RQY and M609RQY, respectively. Furthermore, cassava peel stimulated maximum manganese-dependent peroxidase (141 U/L) production by the strain M109RQY. The de-lignified rice straw and the nutritionally-improved cassava peel could serve as potential animal feed supplements.
    MeSH terms: Biodegradation, Environmental; Manihot/metabolism*; Fermentation; Industrial Waste*; Refuse Disposal/methods*; Oryza/metabolism*; Lentinula/enzymology; Lentinula/growth & development; Lentinula/metabolism*; Environmental Restoration and Remediation/methods*
  5. Yuzir A, Abdullah N, Chelliapan S, Sallis P
    Bioresour Technol, 2013 Apr;133:158-65.
    PMID: 23422308 DOI: 10.1016/j.biortech.2013.01.086
    The effects of Mecoprop (RS)-MCPP were investigated in an anaerobic membrane bioreactor (AnMBr) fed with synthetic wastewater containing stepwise increases in Mecoprop concentration, 5-200 mg L(-1) over 240 days. Effects were observed in terms of soluble chemical oxygen demand (COD) removal efficiency, volatile fatty acid (VFA) production, and methane yield. Soluble COD removal efficiency was stable at Mecoprop concentrations below 200 (±3) mg L(-1), with an average of 98 (±0.7)% removal. However, at 200 (±3) mg L(-1) Mecoprop, the COD removal efficiency decreased gradually to 94 (±1.5)%. At 5 mg L(-1) Mecoprop, acetic and propionic acid concentrations increased by 60% and 160%, respectively. In contrast, when Mecoprop was increased to 200 (±3) mg L(-1), the formation and degradation of acetate was unaffected by the higher Mecoprop concentration, acetate remaining below 35 mg L(-1). Increases in the Mecoprop specific utilization rate were observed as Mecoprop was increased stepwise between 5 and 200 mg L(-1).
    MeSH terms: Anaerobiosis; Archaea/metabolism; Bacteria/metabolism; Biodegradation, Environmental; Fatty Acids, Volatile/analysis; 2-Methyl-4-chlorophenoxyacetic Acid/analogs & derivatives*; 2-Methyl-4-chlorophenoxyacetic Acid/isolation & purification; Membranes, Artificial*; Methane/biosynthesis; Solubility; Water Purification/instrumentation*; Water Purification/methods*; Bioreactors/microbiology*; Biological Oxygen Demand Analysis; Waste Water/chemistry*
  6. Sabetghadam A, Ramanathan S, Sasidharan S, Mansor SM
    J Ethnopharmacol, 2013 Apr 19;146(3):815-23.
    PMID: 23422336 DOI: 10.1016/j.jep.2013.02.008
    ETHNOPHARMACOLOGICAL RELEVANCE: Mitragyna speciosa is a popular medicinal plant in Southeast Asia which is commonly used for its morphine-like effects. Although the analgesic properties of Mitragyna speciosa and its ability to ameliorate withdrawal signs after abrupt cessation of opioid abuse are well known, information about the long-term safety of the plant's active compounds is lacking. In this work, we evaluated the effects of sub-chronic exposure to mitragynine, the principal alkaloid of Mitragyna speciosa leaves in rats.

    MATERIALS AND METHODS: Male and female Sprague-Dawley rats received three doses of mitragynine (1, 10, 100mg/kg, p.o) for 28 days respectively. Food intake and relative body weight were measured during the experiment. After completion of drug treatment biochemical, hematological, and histological analyses were performed.

    RESULTS: No mortality was observed in any of the treatment groups. The groups of rats treated with the lower and intermediate doses showed no toxic effects during the study. However, the relative body weight of the group of female rats treated with the 100mg/kg dose was decreased significantly. Food intake also tended to decrease in the same group. Only relative liver weight increased after treatment with the high dose of mitragynine (100mg/ kg) in both the male and female treatment groups of rats. Biochemical and hematological parameters were also altered especially in high dose treatment group which corresponds to the histopathological changes.

    CONCLUSIONS: The study demonstrated that mitragynine is relatively safe at lower sub-chronic doses (1-10mg/kg) but exhibited toxicity at a highest dose (sub-chronic 28 days: 100mg/kg). This was confirmed by liver, kidney, and brain histopathological changes, as well as hematological and biochemical changes.

    MeSH terms: Administration, Oral; Animals; Body Weight/drug effects; Brain/drug effects; Brain/pathology; Dose-Response Relationship, Drug; Eating/drug effects; Female; Kidney/drug effects; Kidney/pathology; Liver/drug effects; Liver/pathology; Male; Organ Specificity; Rats, Sprague-Dawley; Plant Leaves/chemistry; Mitragyna/chemistry*; Secologanin Tryptamine Alkaloids/administration & dosage; Secologanin Tryptamine Alkaloids/isolation & purification; Secologanin Tryptamine Alkaloids/toxicity*; Rats; Toxicity Tests, Subchronic
  7. Sellappans R, Chua SS, Tajuddin NA, Lai PSM
    Australas Med J, 2013;6(1):60-3.
    PMID: 23423150 DOI: 10.4066/AMJ.2013.1643
    Medication error has been identified as a major factor affecting patient safety. Many innovative efforts such as Computerised Physician Order Entry (CPOE), a Pharmacy Information System, automated dispensing machines and Point of Administration Systems have been carried out with the aim of improving medication safety. However, areas remain that require urgent attention. One main area will be the lack of continuity of care due to the breakdown of communication between multiple healthcare providers. Solutions may include consideration of "health smart cards" that carry vital patient medical information in the form of a "credit card" or use of the Malaysian identification card. However, costs and technical aspects associated with the implementation of this health smart card will be a significant barrier. Security and confidentiality, on the other hand, are expected to be of primary concern to patients. Challenges associated with the implementation of a health smart card might include physician buy-in for use in his or her everyday practice. Training and technical support should also be available to ensure the smooth implementation of this system. Despite these challenges, implementation of a health smart card moves us closer to seamless care in our country, thereby increasing the productivity and quality of healthcare.
    MeSH terms: Diffusion of Innovation; Medication Errors; Review; Patient Safety*
  8. Liew SM, Abdullah A, Abdullah N, Chia YC
    Australas Med J, 2013;6(1):67-9.
    PMID: 23423184 DOI: 10.4066/AMJ.2013.1629
    Cardiovascular disease (CVD) remains the leading cause of morbidity and mortality worldwide. Despite efforts to tackle CVD, its prevalence continues to escalate in almost every country. The problem requires an exploration of novel ways to uncover solutions. Health innovations that embrace new knowledge and technology possess the potential to revolutionize the management of CVD. Using findings from published studies on CVD, researchers generated innovations in the areas of global risk assessment, home and remote monitoring and bedside testing. The use of pharmacogenetics and methods to support lifestyle changes represent other potential topics for innovations. Gaps in existing knowledge and practice of CVD provide opportunities for the development of new ideas, practices and technology. However, healthcare professionals need to be cognisant of the limitations of health innovations and advocate for safeguarding patients' wellbeing.
  9. Romero RV, Mahadeva S
    World J Gastrointest Endosc, 2013 Feb 16;5(2):39-46.
    PMID: 23424015 DOI: 10.4253/wjge.v5.i2.39
    Recent technological advances in colonoscopy have led to improvements in both image enhancement and procedural performance. However, the utility of these technological advancements remain dependent on the quality of bowel preparation during colonoscopy. Poor bowel preparation has been shown to be associated with lower quality indicators of colonoscopy performance, such as reduced cecal intubation rates, increased patient discomfort and lower adenoma detection. The most popular bowel preparation regimes currently used are based on either Polyethylene glycol-electrolyte, a non-absorbable solution, or aqueous sodium phosphate, a low-volume hyperosmotic solution. Statements from various international societies and several reviews have suggested that the efficacy of bowel preparation regimes based on both purgatives are similar, although patients' compliance with these regimes may differ somewhat. Many studies have now shown that factors other than the type of bowel preparation regime used, can influence the quality of bowel preparation among adult patients undergoing colonoscopy. These factors can be broadly categorized as either patient-related or procedure-related. Studies from both Asia and the West have identified patient-related factors such as an increased age, male gender, presence of co-morbidity and socio-economic status of patients to be associated with poor bowel preparation among adults undergoing routine out-patient colonoscopy. Additionally, procedure-related factors such as adherence to bowel preparation instructions, timing of bowel purgative administration and appointment waiting times for colonoscopy are recognized to influence the quality of colon cleansing. Knowledge of these factors should aid clinicians in modifying bowel preparation regimes accordingly, such that the quality of colonoscopy performance and delivery of service to patients can be optimised.
  10. Low ML, Ravoof TB, Tahir MI, Crouse KA, Tiekink ER
    Acta Crystallogr Sect E Struct Rep Online, 2013 Feb 1;69(Pt 2):o167-8.
    PMID: 23424455 DOI: 10.1107/S1600536812051537
    In the title compound, C(16)H(15)N(3)S(2), the central C(2)N(2)S(2) residue is planar (r.m.s. deviation = 0.045 Å) and the pyridyl and benzene rings are inclined and approximately coplanar to this plane, respectively [dihedral angles = 72.85 (9) and 10.73 (9)°], so that, overall, the mol-ecule adopts an L-shape. The conformation about each of the N=C [1.290 (3) Å] and C=C [1.340 (3) Å] bonds is E. Supra-molecular chains along [1-10] are stabilized by N-H⋯N(pyridine) hydrogen bonding and these are connected into a double layer that stacks along the c-axis direction by C-H⋯π(pyridine) inter-actions.
  11. Break MK, Mehta S, Tahir MI, Crouse KA, Khoo TJ
    PMID: 23424463 DOI: 10.1107/S1600536812051008
    The title compound, C(12)H(16)N(2)S(3), was obtained by the condensation reaction of S-benzyl dithio-carbazate and 3-mercaptobutan-2-one. The phenyl ring and thiol (SH) group are approximately perpendicular [S-C-C-C and N-C-C-S torsion angles = 67.8 (3) and 116.9 (2)°, respectively] to the rest of the mol-ecule. In the crystal, mol-ecules are linked by weak S-H⋯S and N-H⋯S hydrogen bonds, π-π inter-actions between the benzene rings [centroid-centroid distance = 3.823 (2) Å] and C-H⋯π inter-actions.
  12. Taha M, Ismail NH, Aziza AN, Shah SA, Yousuf S
    Acta Crystallogr Sect E Struct Rep Online, 2013 Feb 01;69(Pt 2):o245.
    PMID: 23424524 DOI: 10.1107/S160053681300127X
    In the title compound, C(29)H(21)O(3)P, a coumarin-substitued ylid, the P atom is linked to three benzene rings and a planar coumarin moiety via a methyl-enecarbonyl group. The bond lengths in the P=C-C=O fragment clearly indicate a delocalized system involving the olefinic and carbonyl bonds. The mol-ecular structure is stabilized by an intra-molecular C-H⋯O inter-action that results in an S7 graph-set ring motif. In the crystal, mol-ecules are linked into a three-dimensional framework by C-H⋯O hydrogen bonds.
  13. Baharudin MS, Taha M, Ismail NH, Shah SA, Yousuf S
    PMID: 23424549 DOI: 10.1107/S160053681300175X
    In the title hydrazone derivative, C(15)H(13)ClN(2)O(2), the dihedral angle between the benzene rings is 2.36 (2)°. An intra-molecular N-H⋯O hydrogen bond is present. In the crystal, N-H⋯O and C-H⋯O hydrogen bonds link the mol-ecules into chains running parallel to the b axis.
  14. Taha M, Baharudin MS, Ismail NH, Shah SA, Yousuf S
    PMID: 23424550 DOI: 10.1107/S1600536813001748
    In the title hydrazone derivative, C(15)H(14)N(2)O(5), the benzene rings are twisted by 7.55 (8)° with respect to each other. The azomethine double bond adopts an E conformation. The mol-ecular structure is stabilized by intra-molecular O-H⋯N and N-H⋯O hydrogen bonds, generating S6 ring motifs. In the crystal, mol-ecules are linked into a three-dimensional network by O-H⋯O hydrogen bonds.
  15. Mansor NS, Mohammat MF, Shaameri Z, Khaledi H
    Acta Crystallogr Sect E Struct Rep Online, 2013 Feb 1;69(Pt 2):o293-4.
    PMID: 23424562 DOI: 10.1107/S1600536813001943
    The asymmetric unit of the title compound, C(14)H(17)NO(4)·1.25H(2)O, consists of four substituted pyrrolidone mol-ecules (two pairs of enanti-omers) and five water mol-ecules. The five-membered rings each have an envelope conformation, with the C atom bonded to the ester group as the flap. The mean planes of the five-membered rings of the four pyrrolidone mol-ecules make dihedral angles of 60.87 (5), 64.45 (5), 62.03 (5) and 65.79 (5)° with respect to the phenyl rings. In the crystal, the pyrrolidone and water mol-ecules are connected through O-H⋯O hydrogen bonds, forming a layer parallel to the ab plane. The two-dimensional network is further stabilized by inter-molecular C-H⋯O hydrogen bonds.
  16. Yoon YK, Ali MA, Tan SC, Rosli MM, Razak IA
    PMID: 23424569 DOI: 10.1107/S1600536813001116
    In the title compound, C(24)H(25)N(3)O(5), the eth-oxy group is disordered over two orientations in a 0.853 (14):0.147 (14) ratio. The benzimadazole ring system (r.m.s. deviation = 0.016 Å) makes a dihedral angle of 35.47 (7)° with the attached benzene ring. The pyrrolidine ring adopts an envelope conformation with a methyl-ene C atom as the flap. In the crystal, inversion dimers linked by pairs of O-H⋯N hydrogen bonds generate R(2) (2)(16) loops. C-H⋯O inter-actions link the dimers into a three-dimensional network.
  17. Ali RB, Atangwho IJ, Kuar N, Ahmad M, Mahmud R, Asmawi MZ
    PMID: 23425283 DOI: 10.1186/1472-6882-13-39
    One vital therapeutic approach for the treatment of type 2 diabetes mellitus is the use of agents that can decrease postprandial hyperglycaemia by inhibiting carbohydrate digesting enzymes. The present study investigated the effects of bioassay-guided extract and fractions of the dried fruit pericarp of Phaleria macrocarpa, a traditional anti-diabetic plant, on α-glucosidase and α-amylase, in a bid to understand their anti-diabetic mechanism, as well as their possible attenuation action on postprandial glucose increase.
    MeSH terms: alpha-Amylases/antagonists & inhibitors*; Animals; Blood Glucose/metabolism; Diabetes Mellitus, Experimental/drug therapy*; Diabetes Mellitus, Experimental/enzymology; Diabetes Mellitus, Experimental/metabolism; Diabetes Mellitus, Type 2/drug therapy; Dietary Carbohydrates/metabolism*; Digestion/drug effects; Dose-Response Relationship, Drug; Fruit; Hyperglycemia/metabolism; Hyperglycemia/prevention & control*; Hypoglycemic Agents/pharmacology; Hypoglycemic Agents/therapeutic use; Male; Plant Extracts/pharmacology; Plant Extracts/therapeutic use*; Sucrose/metabolism; Rats, Sprague-Dawley; Area Under Curve; Thymelaeaceae*; Rats; Glycoside Hydrolase Inhibitors*
  18. Low VL, Chen CD, Lee HL, Lim PE, Leong CS, Sofian-Azirun M
    J Med Entomol, 2013 Jan;50(1):103-11.
    PMID: 23427658
    A nationwide investigation was carried out to determine the current susceptibility status of Culex quinquefasciatus Say populations against four active ingredients representing four major insecticide classes: DDT, propoxur, malathion, and permethrin. Across 14 study sites, both larval and adult bioassays exhibited dissimilar trends in susceptibility. A correlation between propoxur and malathion resistance and between propoxur and permethrin resistance in larval bioassays was found. The results obtained from this study provide baseline information for vector control programs conducted by local authorities. The susceptibility status of this mosquito should be monitored from time to time to ensure the effectiveness of current vector control operations in Malaysia.
    MeSH terms: Animals; Culex*; Female; Insecticide Resistance; Insecticides*; Malaysia; Mice, Inbred BALB C; Mosquito Control; Mice
  19. Ahamad M, Ibrahim H, Bujang MK, Sah SA, Mohamad N, Nor SM, et al.
    J Med Entomol, 2013 Jan;50(1):140-6.
    PMID: 23427663
    A comprehensive 8-yr survey of acarine ectoparasites (ticks and mites) of bats was carried out in 18 localities from 2002 to 2009. Most of the surveys were conducted during 14 national biodiversity scientific expeditions throughout Malaysia. The objective was to identify acarines of known public health importance from bats and thus determine whether there is any potential public health risk in Malaysia. Trapping of bats was conducted using Harp traps and Mist nets. In total, 1,579 individuals comprising of 6 families and 52 species of bats were examined alive. In general, 25.6% of the bats were infested with acarines. Infestation rates of ticks, mesostigmatid mites, and chiggers on bats examined were 0.4, 10.4, and 14.7%, respectively. Their prevalence and mean intensity were tabulated. Genera of ticks extracted were Amblyomma, Dermacentor, Ixodes, and Ornithodoros. Of these genera, only two species can be identified to species level and they are Amblyomma cordiferum and Ixodes simplex. In total, 8 genera and 15 species of mesostigmatid mites were found; the species were Ancystropus eonycteris, Ancystropus zeleborii, Echinonysus nasutus, Laelaps aingworthae, Laelaps nuttalli, Laelaps sanguisugus, Laelaps sculpturatus, Longolaelaps longulus, Longolaelaps whartonii, Meristaspis lateralis, Meristaspis macroglossi, Paraperiglischrus rhinolophinus, Spinturnix acuminatus, Spinturnix americanus, and Spinturnix bakeri. Chiggers on bats were represented by 12 genera and 6 species; the species identified were Gahrliepia fletcheri, Riedlinia lipoxena, Trombigastia cadei, Walchiella impar, Walchiella oudemansi, and Whartonia caobangensis. The study produced an up-to-date list of acarine ectoparasites of bats in Malaysia where a total of 38 genera and 47 species of acarines were listed. Findings of the study demonstrated that 5 genera and 1 species of acarines that may pose potential health risks, can be found on bats.
    MeSH terms: Acari*; Animals; Chiroptera/parasitology*; Ectoparasitic Infestations/epidemiology*; Malaysia; Biodiversity
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