Smart grid (SG) application is being used nowadays to meet the demand of increasing power consumption. SG application is considered as a perfect solution for combining renewable energy resources and electrical grid by means of creating a bidirectional communication channel between the two systems. In this paper, three SG applications applicable to renewable energy system, namely, distribution automation (DA), distributed energy system-storage (DER) and electrical vehicle (EV), are investigated in order to study their suitability in Long Term Evolution (LTE) network. To compensate the weakness in the existing scheduling algorithms, a novel bandwidth estimation and allocation technique and a new scheduling algorithm are proposed. The technique allocates available network resources based on application's priority, whereas the algorithm makes scheduling decision based on dynamic weighting factors of multi-criteria to satisfy the demands (delay, past average throughput and instantaneous transmission rate) of quality of service. Finally, the simulation results demonstrate that the proposed mechanism achieves higher throughput, lower delay and lower packet loss rate for DA and DER as well as provide a degree of service for EV. In terms of fairness, the proposed algorithm shows 3%, 7 % and 9% better performance compared to exponential rule (EXP-Rule), modified-largest weighted delay first (M-LWDF) and exponential/PF (EXP/PF), respectively.
This study presents an investigation on the effect of shield placement for mitigation of transient voltage in a 33/11 kV, 30 MVA transformer due to Standard Switching Impulse (SSI) and Oscillating Switching Impulse (OSI) surges. Generally, the winding and insulation in transformers could experience severe voltage stress due to the external impulses i.e. switching events. Hence, it is important to examine the voltage stress and identify the mitigation action i.e. shield placements in order to reduce the adverse effect to the transformer windings. First, the resistances, inductances, and capacitances (RLC) were calculated for disc type transformer in order to develop the winding RLC equivalent circuit. The SSI and OSI transient voltage waveforms were applied to the High Voltage (HV) winding whereby the transient voltages were simulated for each disc. The resulting voltage stresses were mitigated through different configurations of electrostatic shield placements. The resonant oscillations generated due to switching surges were analysed through initial voltage distribution. The analyses on the transient voltages of the transformer winding and standard error of the slope (SEb) reveal that the location of shield placement has a significant effect on the resonant switching voltages. The increment of the shield number in the windings does not guarantee optimize mitigation of the resonant switching transient voltages. It is found that the voltage stress along the windings is linear once a floating shield is placed between the HV and Low Voltage (LV) windings of the disc-type transformer under the SSI and OSI waveforms. These findings could assist the manufacturers with appropriate technical basis for mitigation of the transformer winding against the external transient switching overvoltage surges.
Aptamers are single-stranded DNA or RNA oligonucleotides generated by SELEX that exhibit binding affinity and specificity against a wide variety of target molecules. Compared to RNA aptamers, DNA aptamers are much more stable and therefore are widely adopted in a number of applications especially in diagnostics. The tediousness and rigor associated with certain steps of the SELEX intensify the efforts to adopt in silico molecular docking approaches together with in vitro SELEX procedures in developing DNA aptamers. Inspired by these endeavors, we carry out an overview of the in silico molecular docking approaches in DNA aptamer generation, by detailing the stepwise procedures as well as shedding some light on the various softwares used. The in silico maturation strategy and the limitations of the in silico approaches are also underscored.
Since its debut in 2009, League of Legends (LoL) has been on a rise in becoming an extremely favoured multiplayer online battle arena (MOBA) game. This paper presented a logic mining technique to model the results (Win / Lose) of the LoL games played in 3 regions, namely South Korea, North America and Europe. In this research, a method named k satisfiability based reverse analysis method (kSATRA) was brought forward to obtain the logical relationship among the gameplays and objectives in the game. The logical rule obtained from the LoL games was used to categorize the results of future games. kSATRA made use of the advantages of Hopfield Neural Network and k Satisfiability representation. The data set used in this study included the data of all 10 teams from each region, which composed of all games from Spring Season 2018. The effectiveness of kSATRA in obtaining logical rule in LoL games was tested based on root mean square error (RMSE), mean absolute error (MAE), mean absolute percentage error (MAPE) and CPU time. Results acquired from the computer simulation showed the robustness of kSATRA in exhibiting the performance of the LoL teams.
This paper proposes an alternative approach to extract transformer's winding parameters of resistance (R), inductance (L), capacitance (C) and conductance (G) based on Finite Element Method (FEM). The capacitance and conductance were computed based on Fast Multiple Method (FMM) and Method of Moment (MoM) through quasi-electrostatics approach. The AC resistances and inductances were computed based on MoM through quasi-magnetostatics approach. Maxwell's equations were used to compute the DC resistances and inductances. Based on the FEM computed parameters, the frequency response of the winding was obtained through the Bode plot function. The simulated frequency response by FEM model was compared with the simulated frequency response based on the Multi-conductor Transmission Line (MTL) model and the measured frequency response of a 33/11 kV, 30 MVA transformer. The statistical indices such as Root Mean Square Error (RMSE) and Absolute Sum of Logarithmic Error (ASLE) were used to analyze the performance of the proposed FEM model. It is found that the simulated frequency response by FEM model is quite close to measured frequency response at low and mid frequency regions as compared to simulated frequency response by MTL model based on RMSE and ASLE analysis.
Seed dispersals deal with complex systems through which the data collected using advanced seed tracking facilities pose challenges to conventional approaches, such as empirical and deterministic models. The use of stochastic models in current seed dispersal studies is encouraged. This review describes three existing stochastic models: the birth-death process (BDP), a 2 dimensional ( 2
D
) symmetric random walks and a 2
D
intermittent walks. The three models possess Markovian property, which make them flexible for studying natural phenomena. Only a few of applications in ecology are found in seed dispersals. The review illustrates how the models are to be used in seed dispersals context. Using the nonlinear BDP, we formulate the individual-based models for two competing plant species while the cover time model is formulated by the symmetric and intermittent random walks. We also show that these three stochastic models can be formulated using the Gillespie algorithm. The full cover time obtained by the symmetric random walks can approximate the Gumbel distribution pattern as the other searching strategies do. We suggest that the applications of these models in seed dispersals may lead to understanding of many complex systems, such as the seed removal experiments and behaviour of foraging agents, among others.
This article describes attenuation and absorption measurements using the microstrip transmission line technique connected with a microwave vector network analyzer (Agilent 8750B). The magnitudes of the reflection (S11) and transmission (S21) coefficients obtained from the microstrip transmission line were used to determine the attenuation and absorption of oil palm empty fruit bunch/polylactic acid (OPEFB/PLA) composites in a frequency range between 0.20 GHz and 12 GHz at room temperature. The main structure of semi-flexible substrates (OPEFF/PLA) was fabricated using different fiber loading content extracted from oil palm empty fruit bunch (OPEFB) trees hosted in polylactic acid (PLA) using the Brabender blending machine, which ensured mixture homogeneity. The commercial software package, Computer Simulation Technology Microwave Studio (CSTMWS), was used to investigate the microstrip line technique performance by simulating and determine the S11 and S21 for microwave substrate materials. Results showed that the materials' transmission, reflection, attenuation, and absorption properties could be controlled by changing the percentage of OPEFB filler in the composites. The highest absorption loss was calculated for the highest percentage of filler (70%) OPEFB at 12 GHz to be 0.763 dB, while the lowest absorption loss was calculated for the lowest percentage of filler 30% OPEFB at 12 GHz to be 0.407 dB. Finally, the simulated and measured results were in excellent agreement, but the environmental conditions slightly altered the results. From the results it is observed that the value of the dielectric constant (εr') and loss factor (εr″) is higher for the OPEFB/PLA composites with a higher content of OPEFB filler. The dielectric constant increased from 2.746 dB to 3.486 dB, while the loss factor increased from 0.090 dB to 0.5941 dB at the highest percentage of 70% OPEFB filler. The dielectric properties obtained from the open-ended coaxial probe were required as input to FEM to calculate the S11 and S21 of the samples.
Simultaneous Saccharification and Fermentation (SSF) is a process where microbes have to first excrete extracellular enzymes to break polymeric substrates such as starch or cellulose into edible nutrients, followed by in situ conversion of those nutrients into more valuable metabolites via fermentation. As such, SSF is very attractive as a one-pot synthesis method of biological products. However, due to the co-existence of multiple biochemical steps, modeling SSF faces two major challenges. The first is to capture the successive chain-end and/or random scission of the polymeric substrates over time, which determines the rate of generation of various fermentable substrates. The second is to incorporate the response of microbes, including their preferential substrate utilization, to such a complex broth. Each of the above-mentioned challenges has manifested itself in many related areas, and has been competently but separately attacked with two diametrically different tools, i.e., the Population Balance Modeling (PBM) and the Cybernetic Modeling (CM), respectively. To date, they have yet to be applied in unison on SSF resulting in a general inadequacy or haphazard approaches to examine the dynamics and interactions of depolymerization and fermentation. To overcome this unsatisfactory state of affairs, here, the general linkage between PBM and CM is established to model SSF. A notable feature is the flexible linkage, which allows the individual PBM and CM models to be independently modified to the desired levels of detail. A more general treatment of the secretion of extracellular enzyme is also proposed in the CM model. Through a case study on the growth of a recombinant Saccharomyces cerevisiae capable of excreting a chain-end scission enzyme (glucoamylase) on starch, the interlinked model calibrated using data from the literature (Nakamura et al., Biotechnol. Bioeng. 53:21-25, 1997), captured features not attainable by existing approaches. In particular, the effect of various enzymatic actions on the temporal evolution of the polymer distribution and how the microbes respond to the diverse polymeric environment can be studied through this framework.
Aptamers are short oligonucleotides that possess high specificity and affinity against their target. Generated via Systematic Evolution of Ligands by Exponential Enrichment, (SELEX) in vitro, they were screened and enriched. This review covering the study utilizing bioinformatics tools to analyze primary sequence, secondary and tertiary structure prediction, as well as docking simulation for various aptamers and their ligand interaction. Literature was pooled from Web of Science (WoS) and Scopus databases until December 18, 2020 using specific search string related to DNA aptamers, in silico, structure prediction, and docking simulation. Out of 330 published articles, 38 articles were assessed in the analysis based on the predefined inclusion and exclusion criteria. It was found that Mfold and RNA Composer web server is the most popular tool in secondary and tertiary structure prediction of DNA aptamers, respectively. Meanwhile, in docking simulation, ZDOCK and AutoDock are preferred to analyze binding interaction in the aptamer-ligand complex. This review reports a brief framework of recent developments of in silico approaches that provide predictive structural information of ssDNA aptamer.
Three-dimensional (3D) models of the marginal hooks, dorsal and ventral anchors, bars and haptoral reservoirs of a parasite, Sundatrema langkawiense Lim & Gibson, 2009 (Monogenea) were developed using the polygonal modelling method in Autodesk 3ds Max (Version 9) based on two-dimensional (2D) illustrations. Maxscripts were written to rotate the modelled 3D structures. Appropriately orientated 3D haptoral hard-parts were then selected and positioned within the transparent 3D outline of the haptor and grouped together to form a complete 3D haptoral entity. This technique is an inexpensive tool for constructing 3D models from 2D illustrations for 3D visualisation of the spatial relationships between the different structural parts within organisms.
Glioblastoma multiforme (GBM) is a high-grade brain tumor of which the survival patients remain poor.
Tousled-like kinase 1 (TLK1), a serine-threonine kinase, was identified to be overexpressed in cancers such
as GBM. TLK1 plays an important role in controlling survival pathways. To date, there is no structure
available for TLK1 as well as its inhibitors. We aimed to create a homology model of TLK1 and to identify
suitable molecular inhibitors that are likely to bind and inhibit TLK1 activity via in silico high-throughput
virtual screening (HTVS) protein-ligand docking. The 3D homology models of TLK1 were derived from
various servers. All models were evaluated using Swiss Model QMEAN server. Validation was performed
using multiple tools. Energy minimization was performed using YASARA. Subsequently, HTVS was
performed using Molegro Virtual Docker 6.0 and ligands derived from ligand.info database. Drug-like
molecules were filtered using ADME-Tox filtering program. Best homology model was obtained from the
Aurora B kinase (PDB ID:4B8M) derived from Xenopus levias structure that share sequence similarity with
human TLK1. Two compounds were identified from HTVS to be the potential inhibitors as it did not violate
the Lipinski rule of five and the CNS-based filter as a potential drug-like molecule for GBM
Artificial neural networks (ANNs) have been employed to solve a broad variety of tasks. The selection of an ANN model with appropriate weights is important in achieving accurate results. This paper presents an optimization strategy for ANN model selection based on the cuckoo search (CS) algorithm, which is rooted in the obligate brood parasitic actions of some cuckoo species. In order to enhance the convergence ability of basic CS, some modifications are proposed. The fraction Pa of the n nests replaced by new nests is a fixed parameter in basic CS. As the selection of Pa is a challenging issue and has a direct effect on exploration and therefore on convergence ability, in this work the Pa is set to a maximum value at initialization to achieve more exploration in early iterations and it is decreased during the search to achieve more exploitation in later iterations until it reaches the minimum value in the final iteration. In addition, a novel master-leader-slave multi-population strategy is used where the slaves employ the best fitness function among all slaves, which is selected by the leader under a certain condition. This fitness function is used for subsequent Lévy flights. In each iteration a copy of the best solution of each slave is migrated to the master and then the best solution is found by the master. The method is tested on benchmark classification and time series prediction problems and the statistical analysis proves the ability of the method. This method is also applied to a real-world water quality prediction problem with promising results.
Independent mobility is vital to individuals of all ages, and wheelchairs have proven to be great personal mobility devices. The tasks of opening and navigating through a door are trivial for healthy people, while the same tasks could be difficult for some wheelchair users. A wide range of intelligent wheelchair controllers and systems, robotic arms, or manipulator attachments integrated with wheelchairs have been developed for various applications, including manipulating door knobs. Unfortunately, the intelligent wheelchairs and robotic attachments are not widely available as commercial products. Therefore, the current manuscript presents the modeling and simulation of a novel but simple technology in the form of a passive wheelchair accessory (straight, arm-like with a single wheel, and arc-shaped with multiple wheels) for pushing doors open from a wheelchair. From the simulations using different wheel shapes and sizes, it was found that the arc-shaped accessory could push open the doors faster and with almost half the required force as compared to the arm-like accessory. Also, smaller spherical wheels were found to be best in terms of reaction forces on the wheels. Prototypes based on the arc-shaped accessory design will be manufactured and evaluated for pushing doors open and dodging or gliding other obstacles.
Boundary element method (BEM) is a numerical technique that used for modeling infinite domain as is the case for galvanic corrosion analysis. The use of boundary element analysis system (BEASY) has allowed cathodic protection (CP) interference to be assessed in terms of the normal current density, which is directly proportional to the corrosion rate. This paper was present the analysis of the galvanic corrosion between Aluminium and Carbon Steel in natural sea water. The result of experimental was validated with computer simulation like BEASY program. Finally, it can conclude that the BEASY software is a very helpful tool for
future planning before installing any structure, where it gives the possible CP interference on any nearby unprotected metallic structure.
Safe level of daylighting for artefact conservation in historic buildings is a difficult task to achieve. Previous studies indicated that lighting problems in historic museum galleries were mainly due to unshaded walls that allowed direct sun penetration over the display areas. Ceiling geometry can also affect the daylighting performance significantly, particularly on the interior distribution of light. Malaysia, with hot and humid climate, and tropical sky conditions receives plenty of natural light all year around. The fluxes in natural lighting exposures confirm the need for strategic daylight control programme in the exhibition gallery. The study aims to assess the ceiling geometry contribution for four orientations; North, East, South and West through computer simulations. The research approach was based on comparisons between pitched and flat ceiling simulation output data. Further comparisons were performed with the recommended lighting limits for conservation of artefacts. The comparisons allowed better understanding of light damage issues and highlight the control of daylighting distributions through realistic predictive images and ceiling geometry designs. The results showed that the types of exhibits materials and its placement are affected by the ceiling geometry and constant changes in natural lighting exposure. The study confirms that ceiling geometry can act as a control mechanism with the environment physical features as part of preventive conservation criteria in the exhibition gallery. Thus, a systematic light-monitoring programme in the exhibition gallery is necessary to control illuminance level and cumulative exposure limits, for artefact preservation.
In this paper, we introduce a new compact left-handed tunable metamaterial structure, inspired by a joint T-D shape geometry on a flexible NiAl2O4 substrate. The designed metamaterial exhibits an extra-large negative refractive index bandwidth of 6.34 GHz, with an operating frequency range from 4 to 18 GHz. We demonstrate the effects of substrate material thickness on the effective properties of metamaterial using two substrate materials: 1) flame retardant 4 and 2) flexible nickel aluminate. A finite integration technique based on the Computer Simulation Technology Microwave Studio electromagnetic simulator was used for our design, simulation, and investigation. A finite element method based on an HFSS (High Frequency Structure Simulator) electromagnetic simulator is also used to simulate results, perform verifications, and compare the measured results. The simulated resonance peaks occurred at 6.42 GHz (C-band), 9.32 GHz (X-band), and 16.90 GHz (Ku-band), while the measured resonance peaks occurred at 6.60 GHz (C-band), 9.16 GHz (X-band) and 17.28 GHz (Ku-band). The metamaterial structure exhibited biaxial tunable properties by changing the electromagnetic wave propagation in the y and z directions and the left-handed characteristics at 11.35 GHz and 13.50 GHz.
Wireless Sensor Networks (WSNs) are vulnerable to Node Replication attacks or Clone attacks. Among all the existing clone detection protocols in WSNs, RAWL shows the most promising results by employing Simple Random Walk (SRW). More recently, RAND outperforms RAWL by incorporating Network Division with SRW. Both RAND and RAWL have used SRW for random selection of witness nodes which is problematic because of frequently revisiting the previously passed nodes that leads to longer delays, high expenditures of energy with lower probability that witness nodes intersect. To circumvent this problem, we propose to employ a new kind of constrained random walk, namely Single Stage Memory Random Walk and present a distributed technique called SSRWND (Single Stage Memory Random Walk with Network Division). In SSRWND, single stage memory random walk is combined with network division aiming to decrease the communication and memory costs while keeping the detection probability higher. Through intensive simulations it is verified that SSRWND guarantees higher witness node security with moderate communication and memory overheads. SSRWND is expedient for security oriented application fields of WSNs like military and medical.
Radio propagation prediction simulation methods based on deterministic technique such as ray launching is extensively used to accomplish radio channel characterization. However, the superiority of the simulation depends on the number of rays launched and received. This paper presented the indoor three-dimensional (3D) Minimum Ray Launching Maximum Accuracy (MRLMA) technique, which is applicable for an efficient indoor radio wave propagation prediction. Utilizing the novel MRLMA technique in the simulation environment for ray lunching and tracing can drastically reduce the number of rays that need to be traced, and improve the efficiency of ray tracing. Implementation and justification of MRLMA presented in the paper. An indoor office 3D layouts are selected and simulations have been performed using the MRLMA and other reference techniques. Results showed that the indoor 3D MRLMA model is appropriate for wireless communications network systems design and optimization process with respect to efficiency, coverage, number of rays launching, number of rays received by the mobile station, and simulation time.
Metabolic engineering involves the modification and alteration of metabolic pathways to improve the production of desired substance. The modification can be made using in silico gene knockout simulation that is able to predict and analyse the disrupted genes which may enhance the metabolites production. Global optimization algorithms have been widely used for identifying gene knockout strategies. However, their productions were less than theoretical maximum and the algorithms are easily trapped into local optima. These algorithms also require a very large computation time to obtain acceptable results. This is due to the complexity of the metabolic models which are high dimensional and contain thousands of reactions. In this paper, a hybrid algorithm of Cuckoo Search and Minimization of Metabolic Adjustment is proposed to overcome the aforementioned problems. The hybrid algorithm searches for the near-optimal set of gene knockouts that leads to the overproduction of metabolites. Computational experiments on two sets of genome-scale metabolic models demonstrate that the proposed algorithm is better than the previous works in terms of growth rate, Biomass Product Couple Yield, and computation time.
Wireless Body Area Networks (WBANs) are single-hop network systems, where sensors gather the body's vital signs and send them directly to master nodes (MNs). The sensors are distributed in or on the body. Therefore, body posture, clothing, muscle movement, body temperature, and climatic conditions generally influence the quality of the wireless link between sensors and the destination. Hence, in some cases, single hop transmission ('direct transmission') is not sufficient to deliver the signals to the destination. Therefore, we propose an emergency-based cooperative communication protocol for WBAN, named Critical Data-based Incremental Cooperative Communication (CD-ICC), based on the IEEE 802.15.6 CSMA standard but assuming a lognormal shadowing channel model. In this paper, a complete study of a system model is inspected in the terms of the channel path loss, the successful transmission probability, and the outage probability. Then a mathematical model is derived for the proposed protocol, end-to-end delay, duty cycle, and average power consumption. A new back-off time is proposed within CD-ICC, which ensures the best relays cooperate in a distributed manner. The design objective of the CD-ICC is to reduce the end-to-end delay, the duty cycle, and the average power transmission. The simulation and numerical results presented here show that, under general conditions, CD-ICC can enhance network performance compared to direct transmission mode (DTM) IEEE 802.15.6 CSMA and benchmarking. To this end, we have shown that the power saving when using CD-ICC is 37.5% with respect to DTM IEEE 802.15.6 CSMA and 10% with respect to MI-ICC.