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Fulltext Geographical and social isolation drive the evolution of Austronesian languages

Padilla-Iglesias C, Gjesfjeld E, Vinicius L

PLoS One, 2020;15(12):e0243171.
PMID: 33259529 DOI: 10.1371/journal.pone.0243171

The origins of linguistic diversity remain controversial. Studies disagree on whether group features such as population size or social structure accelerate or decelerate linguistic differentiation. While some analyses of between-group factors highlight the role of geographical isolation and reduced linguistic exchange in differentiation, others suggest that linguistic divergence is driven primarily by warfare among neighbouring groups and the use of language as marker of group identity. Here we provide the first integrated test of the effects of five historical sociodemographic and geographic variables on three measures of linguistic diversification among 50 Austronesian languages: rates of word gain, loss and overall lexical turnover. We control for their shared evolutionary histories through a time-calibrated phylogenetic sister-pairs approach. Results show that languages spoken in larger communities create new words at a faster pace. Within-group conflict promotes linguistic differentiation by increasing word loss, while warfare hinders linguistic differentiation by decreasing both rates of word gain and loss. Finally, we show that geographical isolation is a strong driver of lexical evolution mainly due to a considerable drift-driven acceleration in rates of word loss. We conclude that the motor of extreme linguistic diversity in Austronesia may have been the dispersal of populations across relatively isolated islands, favouring strong cultural ties amongst societies instead of warfare and cultural group marking.

Matched MeSH terms: Pacific Islands
Fulltext Resurrection of Bronchocela burmana Blanford, 1878 for the Green Crested Lizard (Squamata, Agamidae) of southern Myanmar

Zug GR, Mulcahy DG, Vindum JV

Zookeys, 2017.
PMID: 28331413 DOI: 10.3897/zookeys.657.11600

Recent fieldwork in southern Tanintharyi revealed the presence of a small Green Crested Lizard in the wet evergreen forest. We generated mtDNA sequence data (ND2) that demonstrates that this population's nearest relative is Bronchocela rayaensis Grismer et al., 2015 of Pulau Langkawi, northwestern Peninsular Malaysia and Phuket Island. Morphologically the Burmese Bronchocela shares many features with Bronchocela rayaensis, which potentially would make this recently described Thai-Malay species a synonym of Bronchocela burmana Blanford, 1878; however, we interpret the genetic and morphological differences to reflect evolutionary divergence and recommend the recognition of both species.

Matched MeSH terms: Islands
A review of the burden of disease due to otitis media in the Asia-Pacific

Mahadevan M, Navarro-Locsin G, Tan HK, Yamanaka N, Sonsuwan N, Wang PC, et al.

Int J Pediatr Otorhinolaryngol, 2012 May;76(5):623-35.
PMID: 22404948 DOI: 10.1016/j.ijporl.2012.02.031

The burden of disease due to otitis media (OM) in Asia Pacific countries was reviewed to increase awareness and raise understanding within the region.

Matched MeSH terms: Pacific Islands/epidemiology
Fulltext Coastal proximity of populations in 22 Pacific Island Countries and Territories

Andrew NL, Bright P, de la Rua L, Teoh SJ, Vickers M

PLoS One, 2019;14(9):e0223249.
PMID: 31568527 DOI: 10.1371/journal.pone.0223249

The coastal zones of Small Island States are hotspots of human habitation and economic endeavour. In the Pacific region, as elsewhere, there are large gaps in understandings of the exposure and vulnerability of people in coastal zones. The 22 Pacific Countries and Territories (PICTs) are poorly represented in global analyses of vulnerability to seaward risks. We combine several data sources to estimate populations to zones 1, 5 and 10 km from the coastline in each of the PICTs. Regional patterns in the proximity of Pacific people to the coast are dominated by Papua New Guinea. Overall, ca. half the population of the Pacific resides within 10 km of the coast but this jumps to 97% when Papua New Guinea is excluded. A quarter of Pacific people live within 1 km of the coast, but without PNG this increases to slightly more than half. Excluding PNG, 90% of Pacific Islanders live within 5 km of the coast. All of the population in the coral atoll nations of Tokelau and Tuvalu live within a km of the ocean. Results using two global datasets, the SEDAC-CIESIN Gridded Population of the World v4 (GPWv4) and the Oak Ridge National Laboratory Landscan differed: Landscan under-dispersed population, overestimating numbers in urban centres and underestimating population in rural areas and GPWv4 over-dispersed the population. In addition to errors introduced by the allocation models of the two methods, errors were introduced as artefacts of allocating households to 1 km x 1 km grid cell data (30 arc-seconds) to polygons. The limited utility of LandScan and GPWv4 in advancing this analysis may be overcome with more spatially resolved census data and the inclusion of elevation above sea level as an important dimension of vulnerability.

Matched MeSH terms: Pacific Islands/ethnology
Asia Pacific Stroke Organization

Tan KS, Lin RT, Yoon BW, Suwanwela N, Mehndiratta MM, Venketasubramanian N

Stroke, 2021 12;52(12):e844-e845.
PMID: 34807747 DOI: 10.1161/STROKEAHA.121.035397
Matched MeSH terms: Pacific Islands
Fulltext Organizational Update From the Asia Pacific Stroke Organization

Yoon BW, Toyoda K, Tan KS, Fong WC, Suwanwela NC, Venketasubramanian N

Stroke, 2024 Jan;55(1):e8-e9.
PMID: 37982241 DOI: 10.1161/STROKEAHA.123.044175
Matched MeSH terms: Pacific Islands/epidemiology
Fulltext Genome Sequence of Nitratireductor basaltis Strain UMTGB225, a Marine Bacterium Isolated from a Green Barrel Tunicate in Bidong Island, Malaysia

Danish-Daniel M, Gan HY, Gan HM, Saari NA, Usup G

Genome Announc, 2014;2(5).
PMID: 25301654 DOI: 10.1128/genomeA.01015-14

Nitratireductor basaltis strain UMTGB225 is a Gram-negative bacterium isolated from a marine tunicate found in Bidong Island, Terengganu, Malaysia. In this study, the genome of Nitratireductor basaltis UMTGB225 was sequenced to gain insight into the role of this bacterium and its association with tunicate hosts in a coral reef habitat.

Matched MeSH terms: Islands
Differentials in urban-rural fertility in the countries of the ESCAP region

United Nations. Economic and Social Commission for Asia and the Pacific ESCAP. Secretariat

Econ Bull Asia Pac, 1985 Dec;36(2):56-80.
PMID: 12280574

Fertility differentials between rural and urban populations are investigated using World Fertility Survey data for Bangladesh, Fiji, Indonesia, Malaysia, Nepal, Pakistan, the Philippines, the Republic of Korea, Sri Lanka, and Thailand. "The fertility measure used in this analysis is the number of children ever born to a woman. An attempt is made first to establish the differential in fertility levels between urban and rural areas after necessary control of the demographic factors..., and then the possible explanation of the differential is sought in terms of socio-economic variables such as education of the respondent, and occupation, work pattern, work status and place of work of the respondent as well as that of the husband." Data concerning the fertility differentials and the associated explanatory variables are presented in tables and charts. "The results tend to show that the countries of Asia are undergoing similar patterns of fertility transition as was experienced in the advanced countries. Perhaps one can graduate the countries in the transition scale as follows: Bangladesh, Indonesia, Nepal, Pakistan and Malaysia are in the initial stage; Fiji, the Philippines, the Republic of Korea, Sri Lanka and Thailand are in the middle stage of transition."

Matched MeSH terms: Pacific Islands
Summary of regional response to the fourth inquiry

United Nations. Economic and Social Commission for Asia and the Pacific ESCAP. Population and Social Affairs Division

Asian Pac Popul Programme News, 1979;8(3):8-12.
PMID: 12278305
Matched MeSH terms: Indian Ocean Islands; Pacific Islands
The influence of infant and child mortality on fertility in selected countries of the Asian and Pacific region

United Nations. Economic and Social Commission for Asia and the Pacific ESCAP. Population Division. Fertility and Family Planning Section

Popul Res Leads, 1985.
PMID: 12314064
Matched MeSH terms: Pacific Islands
The use of contraception in the Asian and Pacific region

United Nations. Economic and Social Commission for Asia and the Pacific ESCAP. Population Division. Fertility and Family Planning Section

Popul Res Leads, 1985;?(21):1-31.
PMID: 12340713

PIP:
This paper presents data on contraceptive prevalence from 26 national sample surveys conducted in the Asian and Pacific region during the 1966-84 period. The basic data presented are: contraceptive prevalence rates, cross-classified by age where possible; the percentage of couples using each contraceptive method, also cross-classified by age where possible. To facilitate comparison between countries and across time, the data are presented in a standardized form, both numerically and graphically. Contraceptive prevalence rates range from 1-85% (the highest and lowest ever reported). In the Asian and Pacific region as a whole, the prevalence rate was around 40%, which was about the same level as in the Latin American region. In Africa the prevalence rate was around 12%, and in developed countries around 70%. In the late 1960s, prevalence rates in the Asian and Pacific region were less than 20%. By the early 1980s, contraception had spread throughout all parts of society so that the rates in many countries were over 50%, and in some over 60%. Most of the countries with high prevalence rates were in East and Southeast Asia, and most of those with low prevalence in South Asia. Displayed graphically with the age of wife (from 15-49 years) on the x axis, contraceptive prevalence rates appear as an inverted U, low at both ends of the age range and high in the middle. Curves skewed to the left generally have stronger effects on fertility than those skewed to the right. This is due to the fact that most births occur among younger couples and contraception used by younger couples prevents more births than contraception used by older couples. The curves of countries relying primarily on sterilization are generally skewed to the right. The data show a wide variation in the mix of contraceptives used in each country. The use of various contraceptives by age is similar throughout the region. Young couples generally use oral contraceptives (OCs), those in the middle of the reproductive ages the IUD, and those near the end of the childbearing ages sterilization. Rhythm and withdrawal methods appear to be preferred both by couples in the youngest and oldest age groups. Contraceptive needs change as couples progress through the life cycle. Consequently, family planning programs must work to provide a broad mix of contraceptives. The tables show that Thailand and the Republic of Korea, 2 countries which are thought to have excellent family planning programs, have provided well-balanced mixes of contraceptives. Other countries in the region have depended on only 1 or 2 methods.

Matched MeSH terms: Pacific Islands
Genetic study of the Paleolithic and Neolithic Southeast Asians

Oota H, Kurosaki K, Pookajorn S, Ishida T, Ueda S

Hum Biol, 2001 Apr;73(2):225-31.
PMID: 11446426

DNA samples were extracted from six prehistoric human remains, found on the Malay Peninsula, dating to the Paleolithic and the Neolithic periods. Nucleotide sequences of mitochondrial DNA were determined by the polymerase chain reaction-direct sequencing method. A phylogenetic tree between prehistoric and present humans was constructed based on the nucleotide sequence data. Mitochondrial DNA phylogenetic relationships and ethnoarchaeological evidence suggest that there is a continuity beetween the pre-Neolithic humans and the present Semang and that the Neolithic humans in this area might be an ancestral group of the Senoi.

Matched MeSH terms: Pacific Islands
Population change and some aspects of socio-economic development

UNESCO. Regional Office for Education in Asia and the Pacific

Bull Unesco Reg Off Educ Asia Pac, 1982 Jun.
PMID: 12265663
Matched MeSH terms: Pacific Islands
Fulltext Seagrass coverage and associated fauna at Gaya Island, Sabah, Malaysia: A pilot seagrass transplantation

Ejria Saleh, Gallagher, John Barry, Tzuen, Kiat Yap

Borneo Journal of Marine Science and Aquaculture, 2020;4(1):14-19.
MyJurnal

Seagrasses provide a range of marine ecosystem services. These include coastal protection, biodiversity, provision of food for various organisms, breeding and nursery habitats for many marine species, and carbon storage. Increasing anthropogenic pressures have contributed to the decline of seagrass habitats. Transplantation is one of the solutions to increase seagrass coverage and resilience. What is often overlooked, however, is the ability of this tropical ecosystem to attract and support faunal assemblages that may impinge on the success of the transplantation. A pilot study on seagrass transplantation at Gaya Island (Kota Kinabalu, Sabah) was intended for observing its stability and species of fauna that develop association with this vegetation. The study covered the southwest and northeast monsoons. Mixed seagrass species were planted on approximately 50% of 30 m 2 transplantation areas. Monitoring of the planted seagrass was carried out in five phases (T1-T5) from September 2016 to April 2018. Weekly observations were made by SCUBA diving. Identification of associated fauna was done on the spot and was based on morphological characteristics. During the T1 (September to December 2016) the seagrass coverage was reduced to 41% due to strong waves generated by the northeast monsoon. However, the seagrass coverage increased ( 66 %) during the southwest monsoon (T2 - T4) in 2017. In early 2018 (T5), the seagrass coverage again reduced (about 18%) due to strong waves but recovered again at the end of the monitoring period (April 2018). A total of 30 species of fauna that were identified consisted of 9 resident and 21 non-resident species. Physical structure of transplanted seagrass created a microhabitat, and increased the food availability and abundance, which attracted many species of different trophic levels.

Matched MeSH terms: Islands
Taxonomic review of the plant bug subfamily Isometopinae for Taiwan and Japanese Southwest Islands, with descriptions of new taxa (Hemiptera: Heteroptera: Miridae: Isometopinae)

Yasunaga T, Yamada K, Tsai JF

Zootaxa, 2017 Dec 19;4365(4):421-439.
PMID: 29686197 DOI: 10.11646/zootaxa.4365.4.3

The fauna of plant bug subfamily Isometopinae in Taiwan and Japanese Southwest (Nansei) Islands is reviewed. Twenty-five species are recognized, including two new species of Myiomma Puton, M. austroccidens sp. nov. and M. kentingense sp. nov., which are herein diagnosed and described. In addition, Isometopus yehi Lin, 2004 is synonymized with I. bipunctatus Lin; Isometopidea yangi Lin is transferred to Kohnometopus; and a substitute name, Alcecoris linyangorum, is proposed for A. formosanus (Lin Yang) (= a junior secondary homonym of Alcecoris formosanus Lin). An annotated checklist, with updated distributional record and biological information, is provided for all treated taxa. A new tribe Sophianini is proposed for two genera, Alcecoris and Sophianus, characterized principally by the conspicuously modified antennal structures. An additional new species, Alcecoris cochlearatus sp. nov., found during examination of related Oriental specimens, is described from the Malay Peninsula.

Matched MeSH terms: Islands
Fulltext Single-molecule sequencing reveals the molecular basis of multidrug-resistance in ST772 methicillin-resistant Staphylococcus aureus

Steinig EJ, Andersson P, Harris SR, Sarovich DS, Manoharan A, Coupland P, et al.

BMC Genomics, 2015;16:388.
PMID: 25981586 DOI: 10.1186/s12864-015-1599-9

Methicillin-resistant Staphylococcus aureus (MRSA) is a major cause of hospital-associated infection, but there is growing awareness of the emergence of multidrug-resistant lineages in community settings around the world. One such lineage is ST772-MRSA-V, which has disseminated globally and is increasingly prevalent in India. Here, we present the complete genome sequence of DAR4145, a strain of the ST772-MRSA-V lineage from India, and investigate its genomic characteristics in regards to antibiotic resistance and virulence factors.

Matched MeSH terms: Genomic Islands
Fulltext Recruitment constraints in Singapore's fluted giant clam (Tridacna squamosa) population--a dispersal model approach

Neo ML, Erftemeijer PL, van Beek JK, van Maren DS, Teo SL, Todd PA

PLoS One, 2013;8(3):e58819.
PMID: 23555597 DOI: 10.1371/journal.pone.0058819

Recruitment constraints on Singapore's dwindling fluted giant clam, Tridacna squamosa, population were studied by modelling fertilisation, larval transport, and settlement using real-time hydrodynamic forcing combined with knowledge of spawning characteristics, larval development, behaviour, and settlement cues. Larval transport was simulated using a finite-volume advection-diffusion model coupled to a three-dimensional hydrodynamic model. Three recruitment constraint hypotheses were tested: 1) there is limited connectivity between Singapore's reefs and other reefs in the region, 2) there is limited exchange within Singapore's Southern Islands, and 3) there exist low-density constraints to fertilisation efficacy (component Allee effects). Results showed that connectivity among giant clam populations was primarily determined by residual hydrodynamic flows and spawning time, with greatest chances of successful settlement occurring when spawning and subsequent larval dispersal coincided with the period of lowest residual flow. Simulations suggested poor larval transport from reefs located along the Peninsular Malaysia to Singapore, probably due to strong surface currents between the Andaman Sea and South China Sea combined with a major land barrier disrupting larval movement among reefs. The model, however, predicted offshore coral reefs to the southeast of Singapore (Bintan and Batam) may represent a significant source of larvae. Larval exchange within Singapore's Southern Islands varied substantially depending on the locations of source and sink reefs as well as spawning time; but all simulations resulted in low settler densities (2.1-68.6 settled individuals per 10,000 m(2)). Poor fertilisation rates predicted by the model indicate that the low density and scattered distribution of the remaining T. squamosa in Singapore are likely to significantly inhibit any natural recovery of local stocks.

Matched MeSH terms: Islands
Fulltext Acute muscular sarcocystosis: an international investigation among ill travelers returning from Tioman Island, Malaysia, 2011-2012

Esposito DH, Stich A, Epelboin L, Malvy D, Han PV, Bottieau E, et al.

Clin Infect Dis, 2014 Nov 15;59(10):1401-10.
PMID: 25091309 DOI: 10.1093/cid/ciu622

BACKGROUND: Through 2 international traveler-focused surveillance networks (GeoSentinel and TropNet), we identified and investigated a large outbreak of acute muscular sarcocystosis (AMS), a rarely reported zoonosis caused by a protozoan parasite of the genus Sarcocystis, associated with travel to Tioman Island, Malaysia, during 2011-2012.
METHODS: Clinicians reporting patients with suspected AMS to GeoSentinel submitted demographic, clinical, itinerary, and exposure data. We defined a probable case as travel to Tioman Island after 1 March 2011, eosinophilia (>5%), clinical or laboratory-supported myositis, and negative trichinellosis serology. Case confirmation required histologic observation of sarcocysts or isolation of Sarcocystis species DNA from muscle biopsy.
RESULTS: Sixty-eight patients met the case definition (62 probable and 6 confirmed). All but 2 resided in Europe; all were tourists and traveled mostly during the summer months. The most frequent symptoms reported were myalgia (100%), fatigue (91%), fever (82%), headache (59%), and arthralgia (29%); onset clustered during 2 distinct periods: "early" during the second and "late" during the sixth week after departure from the island. Blood eosinophilia and elevated serum creatinine phosphokinase (CPK) levels were observed beginning during the fifth week after departure. Sarcocystis nesbitti DNA was recovered from 1 muscle biopsy.
CONCLUSIONS: Clinicians evaluating travelers returning ill from Malaysia with myalgia, with or without fever, should consider AMS, noting the apparent biphasic aspect of the disease, the later onset of elevated CPK and eosinophilia, and the possibility for relapses. The exact source of infection among travelers to Tioman Island remains unclear but needs to be determined to prevent future illnesses.

Matched MeSH terms: Islands*
Fulltext Comparative genomics of closely related Salmonella enterica serovar Typhi strains reveals genome dynamics and the acquisition of novel pathogenic elements

Yap KP, Gan HM, Teh CS, Chai LC, Thong KL

BMC Genomics, 2014;15:1007.
PMID: 25412680 DOI: 10.1186/1471-2164-15-1007

Typhoid fever is an infectious disease of global importance that is caused by Salmonella enterica subsp. enterica serovar Typhi (S. Typhi). This disease causes an estimated 200,000 deaths per year and remains a serious global health threat. S. Typhi is strictly a human pathogen, and some recovered individuals become long-term carriers who continue to shed the bacteria in their faeces, thus becoming main reservoirs of infection.

Matched MeSH terms: Genomic Islands
Fulltext The dnd operon for DNA phosphorothioation modification system in Escherichia coli is located in diverse genomic islands

Ho WS, Ou HY, Yeo CC, Thong KL

BMC Genomics, 2015;16:199.
PMID: 25879448 DOI: 10.1186/s12864-015-1421-8

Strains of Escherichia coli that are non-typeable by pulsed-field gel electrophoresis (PFGE) due to in-gel degradation can influence their molecular epidemiological data. The DNA degradation phenotype (Dnd(+)) is mediated by the dnd operon that encode enzymes catalyzing the phosphorothioation of DNA, rendering the modified DNA susceptible to oxidative cleavage during a PFGE run. In this study, a PCR assay was developed to detect the presence of the dnd operon in Dnd(+) E. coli strains and to improve their typeability. Investigations into the genetic environments of the dnd operon in various E. coli strains led to the discovery that the dnd operon is harboured in various diverse genomic islands.

Matched MeSH terms: Genomic Islands*

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