Browse publications by year: 2014

  1. Amin L, Azad MA, Gausmian MH, Zulkifli F
    PLoS One, 2014;9(1):e86174.
    PMID: 24489695 DOI: 10.1371/journal.pone.0086174
    The objective of this paper is to assess the attitude of Malaysian stakeholders to genetically modified (GM) salmon and to identify the factors that influence their acceptance of GM salmon using a structural equation model. A survey was carried out on 434 representatives from various stakeholder groups in the Klang Valley region of Malaysia. Public attitude towards GM salmon was measured using self-developed questionnaires with seven-point Likert scales. The findings of this study have confirmed that public attitudes towards GM salmon is a complex issue and should be seen as a multi-faceted process. The most important direct predictors for the encouragement of GM salmon are the specific application-linked perceptions about religious acceptability of GM salmon followed by perceived risks and benefits, familiarity, and general promise of modern biotechnology. Encouragement of GM salmon also involves the interplay among other factors such as general concerns of biotechnology, threatening the natural order of things, the need for labeling, the need for patenting, confidence in regulation, and societal values. The research findings can serve as a database that will be useful for understanding the social construct of public attitude towards GM foods in a developing country.
    MeSH terms: Adolescent; Adult; Animals; Attitude*; Biotechnology/ethics*; Female; Food Labeling; Humans; Malaysia; Male; Middle Aged; Patents as Topic; Surveys and Questionnaires; Salmon/genetics*; Social Perception*; Food, Genetically Modified*
  2. Nguyen MT, Denniston R, Nguyen HT, Hoang TA, Ross H, So AD
    PLoS One, 2014;9(1):e87272.
    PMID: 24489886 DOI: 10.1371/journal.pone.0087272
    Illicit trade carries the potential to magnify existing tobacco-related health care costs through increased availability of untaxed and inexpensive cigarettes. What is known with respect to the magnitude of illicit trade for Vietnam is produced primarily by the industry, and methodologies are typically opaque. Independent assessment of the illicit cigarette trade in Vietnam is vital to tobacco control policy. This paper measures the magnitude of illicit cigarette trade for Vietnam between 1998 and 2010 using two methods, discrepancies between legitimate domestic cigarette sales and domestic tobacco consumption estimated from surveys, and trade discrepancies as recorded by Vietnam and trade partners. The results indicate that Vietnam likely experienced net smuggling in during the period studied. With the inclusion of adjustments for survey respondent under-reporting, inward illicit trade likely occurred in three of the four years for which surveys were available. Discrepancies in trade records indicate that the value of smuggled cigarettes into Vietnam ranges from $100 million to $300 million between 2000 and 2010 and that these cigarettes primarily originate in Singapore, Hong Kong, Macao, Malaysia, and Australia. Notable differences in trends over time exist between the two methods, but by comparison, the industry estimates consistently place the magnitude of illicit trade at the upper bounds of what this study shows. The unavailability of annual, survey-based estimates of consumption may obscure the true, annual trend over time. Second, as surveys changed over time, estimates relying on them may be inconsistent with one another. Finally, these two methods measure different components of illicit trade, specifically consumption of illicit cigarettes regardless of origin and smuggling of cigarettes into a particular market. However, absent a gold standard, comparisons of different approaches to illicit trade measurement serve efforts to refine and improve measurement approaches and estimates.
    MeSH terms: Commerce/economics*; Crime/economics; Crime/statistics & numerical data*; Humans; Smoking/epidemiology; Taxes*; Vietnam; Tobacco Industry/economics; Empirical Research; Tobacco Products/economics*
  3. Stock I
    Med Monatsschr Pharm, 2014 Jan;37(1):4-10; quiz 11-2.
    PMID: 24490433
    Hand, foot and mouth disease (HFMD) is a highly contagious, world-wide distributed viral illness that affects predominantly children. It is caused by several enteroviruses, such as coxsackieviruses A6, A10, A16 and enterovirus 71. In most cases, HFMD follows a benign and self-limiting course. After an incubation period of 3 to 10 days, fever and sore throat, the first symptoms of the disease, appear. A few days later, maculopapular or vesicular eruptions form on the palms and soles as well as in the oral cavity. Since the year 2000, several large HFMD outbreaks have been reported in many Asian regions such as China, Malaysia and Vietnam. In some of these outbreaks, high incidences of severe progressive HFMD forms with some fatalities were observed. Such diseases have been caused primarily by enterovirus 71 strains and were characterized frequently by sudden onset of fever, encephalitis/meningitis and severe respiratory symptoms such as pulmonary edema. Further severe neurological and cardiac complications have also been observed during these outbreaks. Recently, some HFMD outbreaks caused by the coxsackievirus A6 have been reported in several parts of the world. These illnesses also affected adults and were characterized by more severe symptoms of "classical" HFMD. In addition, outbreaks of coxsackievirus-A6-associated HFMD in many countries were associated with onychomadesis, with the loss of nails occurring up to two months after initial symptoms. Treatment of "classical" HFMD is usually symptomatic, a generally recommended antiviral therapy does not exist. In severe HFMD cases, suitable treatment also encompasses mechanical ventilation, as well as the additional application of antiviral agents such as ribavirin. In the last years, several novel agents with good in vitro and in vivo activity against enteroviruses have been developed. A vaccine against HFMD is not yet available.
    MeSH terms: Adult; Animals; Antiviral Agents/therapeutic use*; Child; Child, Preschool; Disease Outbreaks; Hand, Foot and Mouth Disease/diagnosis; Hand, Foot and Mouth Disease/drug therapy*; Hand, Foot and Mouth Disease/epidemiology; Hand, Foot and Mouth Disease/virology; Humans; Isoxazoles/therapeutic use; Phytotherapy; Picornaviridae Infections/diagnosis; Picornaviridae Infections/drug therapy*; Picornaviridae Infections/epidemiology; Picornaviridae Infections/virology; Pyrrolidinones/therapeutic use
  4. Song SL, Lim PE, Phang SM, Lee WW, Hong DD, Prathep A
    BMC Res Notes, 2014;7:77.
    PMID: 24490797 DOI: 10.1186/1756-0500-7-77
    Gracilaria tenuistipitata is an agarophyte with substantial economic potential because of its high growth rate and tolerance to a wide range of environment factors. This red seaweed is intensively cultured in China for the production of agar and fodder for abalone. Microsatellite markers were developed from the chloroplast genome of G. tenuistipitata var. liui to differentiate G. tenuistipitata obtained from six different localities: four from Peninsular Malaysia, one from Thailand and one from Vietnam. Eighty G. tenuistipitata specimens were analyzed using eight simple sequence repeat (SSR) primer-pairs that we developed for polymerase chain reaction (PCR) amplification.
    MeSH terms: Alleles; Malaysia; Phylogeny; Species Specificity; Thailand; Vietnam; DNA Primers; DNA, Chloroplast/genetics*; Microsatellite Repeats*; Random Amplified Polymorphic DNA Technique; Gracilaria/classification; Gracilaria/genetics*; Gracilaria/isolation & purification
  5. Wakabayashi H, Wijayanto T, Lee JY, Hashiguchi N, Saat M, Tochihara Y
    J Physiol Anthropol, 2014 Feb 04;33(1):5.
    PMID: 24490869 DOI: 10.1186/1880-6805-33-5
    BACKGROUND: This study investigated the effect of hydration differences on body fluid and temperature regulation between tropical and temperate indigenes exercising in the heat.

    METHODS: Ten Japanese and ten Malaysian males with matched physical characteristics (height, body weight, and peak oxygen consumption) participated in this study. Participants performed exercise for 60 min at 55% peak oxygen uptake followed by a 30-min recovery at 32°C and 70% relative air humidity with hydration (4 times each, 3 mL per kg body weight, 37°C) or without hydration. Rectal temperature, skin temperature, heart rate, skin blood flow, and blood pressure were measured continuously. The percentage of body weight loss and total sweat loss were calculated from body weight measurements. The percentage change in plasma volume was estimated from hemoglobin concentration and hematocrit.

    RESULTS: Malaysian participants had a significantly lower rectal temperature, a smaller reduction in plasma volume, and a lower heart rate in the hydrated condition than in the non-hydrated condition at the end of exercise (P <0.05), whereas Japanese participants showed no difference between the two hydration conditions. Hydration induced a greater total sweat loss in both groups (P <0.05), and the percentage of body weight loss in hydrated Malaysians was significantly less than in hydrated Japanese (P <0.05). A significant interaction between groups and hydration conditions was observed for the percentage of mean cutaneous vascular conductance during exercise relative to baseline (P <0.05).

    CONCLUSIONS: The smaller reduction in plasma volume and percentage body weight loss in hydrated Malaysians indicated an advantage in body fluid regulation. This may enable Malaysians to reserve more blood for circulation and heat dissipation and thereby maintain lower rectal temperatures in a hydrated condition.

    MeSH terms: Adult; Body Fluids/physiology*; Body Temperature Regulation/physiology*; Dehydration/epidemiology*; Dehydration/physiopathology; Hot Temperature; Humans; Humidity; Japan; Malaysia; Male; Sodium/blood; Thirst/physiology; Exercise/physiology*; Asian Continental Ancestry Group/statistics & numerical data*; Young Adult
  6. Azmi MN, Gény C, Leverrier A, Litaudon M, Dumontet V, Birlirakis N, et al.
    Molecules, 2014;19(2):1732-47.
    PMID: 24492595 DOI: 10.3390/molecules19021732
    A phytochemical investigation of the methanolic extract of the bark of Endiandra kingiana led to the isolation of seven new tetracyclic endiandric acid analogues, kingianic acids A-G (1-7), together with endiandric acid M (8), tsangibeilin B (9) and endiandric acid (10). Their structures were determined by 1D- and 2D-NMR analysis in combination with HRMS experiments. The structure of compounds 9 and 10 were confirmed by single-crystal X-ray diffraction analysis. These compounds were screened for Bcl-xL and Mcl-1 binding affinities and cytotoxic activity on various cancer cell lines. Compound 5 showed moderate cytotoxic activity against human colorectal adeno-carcinoma (HT-29) and lung adenocarcinoma epithelial (A549) cell lines, with IC50 values in the range 15-17 µM, and compounds 3, 6 and 9 exhibited weak binding affinity for the anti-apoptotic protein Mcl-1.
    MeSH terms: Antineoplastic Agents, Phytogenic/pharmacology; Antineoplastic Agents, Phytogenic/chemistry; Carboxylic Acids/chemistry*; Drug Screening Assays, Antitumor; Humans; Plant Extracts/pharmacology; Plant Extracts/chemistry*; X-Ray Diffraction; Molecular Structure*; Apoptosis/drug effects; HT29 Cells; Lauraceae/chemistry*
  7. Shahizon AM, Mohd Zaki F, Julian MR, Hanafiah M
    BMJ Case Rep, 2014;2014.
    PMID: 24493108 DOI: 10.1136/bcr-2013-200862
    MeSH terms: Female; Humans; Infant; Retroperitoneal Neoplasms/complications; Retroperitoneal Neoplasms/surgery*; Rupture, Spontaneous/complications; Rupture, Spontaneous/surgery; Teratoma/complications; Teratoma/surgery*; Intraabdominal Infections/complications; Intraabdominal Infections/surgery*
  8. Ramadhan K, Huda N, Ahmad R
    J Food Sci Technol, 2014 Feb;51(2):256-66.
    PMID: 24493882 DOI: 10.1007/s13197-011-0510-1
    Duck meat is less utilized than other meats in processed products because of limitations of its functional properties, including lower water holding capacity, emulsion stability, and higher cooking loss compared with chicken meat. These limitations could be improved using surimi technology, which consists of washing and concentrating myofibrillar protein. In this study, surimi-like materials were made from duck meat using two or three washings with different solutions (tap water, sodium chloride, sodium bicarbonate, and sodium phosphate buffer). Better improvement of the meat's functional properties was obtained with three washings versus two washings. Washing with tap water achieved the highest gel strength; moderate elevation of water holding capacity, pH, lightness, and whiteness; and left a small amount of fat. Washing with sodium bicarbonate solution generated the highest water holding capacity and pH and high lightness and whiteness values, but it resulted in the lowest gel strength. Processing duck meat into surimi-like material improves its functional properties, thereby making it possible to use duck meat in processed products.
    MeSH terms: Animals; Chickens; Cooking; Ducks; Emulsions; Hydrogen-Ion Concentration; Meat; Phosphates; Sodium; Sodium Chloride; Water; Sodium Bicarbonate
  9. Wan-Wei L, Tengku-Norina TJ, Azma-Azalina AA, Zulkifli AG, Zunaina E
    Int Med Case Rep J, 2014;7:15-7.
    PMID: 24493935 DOI: 10.2147/IMCRJ.S55017
    A 45-year-old female with underlying idiopathic thrombocytopenic purpura (ITP) complained of acute onset of reduced vision and floaters, in both eyes, for 3 weeks. Visual acuity was 6/36 and 6/60 in the right eye and left eye, respectively. Ophthalmoscopy showed bilateral peripapillary, subhyaloid and vitreous hemorrhage. Hematological evaluation revealed moderate anemia (hemoglobin: 93 g/L) and mild thrombocytopenia (platelets: 120×10(9)/L). She was co-managed by a hematologist and ophthalmologists; she was treated medically. Follow-up care during the next 6 weeks revealed spontaneous, partially resolving hemorrhage, with improvement of visual acuity. The purpose of this case report is to highlight ophthalmic involvement of ITP in this patient, despite her only-mild thrombocytopenia, and her spontaneous recovery, despite her receiving only medical treatment.
  10. Sharma AK, Khanna D, Balakumar P
    Int J Cardiol, 2014 Mar 15;172(2):530-2.
    PMID: 24495652 DOI: 10.1016/j.ijcard.2014.01.053
    MeSH terms: Animals; Diabetes Mellitus/drug therapy*; Diabetes Mellitus/pathology; Dipyridamole/administration & dosage*; Endothelium, Vascular/drug effects*; Endothelium, Vascular/pathology; Female; Kidney/drug effects*; Kidney/pathology; Male; Platelet Aggregation Inhibitors/administration & dosage*; Treatment Outcome; Rats, Wistar; Rats
  11. Wang XL, Bao JX, Liang-Shi, Tie-Ma, Deng YC, Zhao G, et al.
    Epilepsy Behav, 2014 Mar;32:64-71.
    PMID: 24495864 DOI: 10.1016/j.yebeh.2013.12.016
    Jeavons syndrome (JS) is one of the underreported epileptic syndromes and is characterized by eyelid myoclonia (EM), eye closure-induced seizures or electroencephalography (EEG) paroxysms, and photosensitivity. In the Western populations, it has been reported to be characterized by focal posterior, occipital predominant epileptiform discharges (OPEDs) or frontal predominant epileptiform discharges (FPEDs) followed by generalized EDs in both interictal and ictal EEG recordings. However, it is not clear if there are different clinical manifestations between OPEDs and FPEDs. The clinical and electrographic presentations in the Chinese population are largely unknown. Here, we report the clinical and electroencephalographic features of 50 Chinese patients with JS and evaluate for the presence of different clinical features between patients with OPEDs and patients with FPEDs.
    MeSH terms: Adolescent; Adult; Aged; Brain/pathology; China; Electroencephalography; Epilepsy/diagnosis*; Epilepsy/physiopathology; Epilepsy, Absence/complications*; Epilepsy, Absence/diagnosis; Eyelids/physiopathology*; Female; Humans; Magnetic Resonance Imaging; Male; Middle Aged; Myoclonus/diagnosis*; Myoclonus/physiopathology*; Occipital Lobe/physiopathology; Seizures/physiopathology; Syndrome; Video Recording
  12. Lim CL, Nogawa T, Uramoto M, Okano A, Hongo Y, Nakamura T, et al.
    J Antibiot (Tokyo), 2014 Apr;67(4):323-9.
    PMID: 24496142 DOI: 10.1038/ja.2013.144
    Two novel quinomycin derivatives, RK-1355A (1) and B (2), and one known quinomycin derivative, UK-63,598 (3), were isolated from a microbial metabolites fraction library of Streptomyces sp. RK88-1355 based on Natural Products Plot screening. The structural elucidation of 1 and 2 was established through two-dimensional NMR and mass spectrometric measurements. They belong to a class of quinomycin antibiotics family having 3-hydroxyquinaldic acid and a sulfoxide moiety. They are the first examples for natural products as a quinoline type quinomycin having a sulfoxide on the intramolecular cross-linkage. They showed potent antiproliferative activities against various cancer cell lines and they were also found to exhibit moderate antibacterial activity.
    MeSH terms: Animals; Anti-Bacterial Agents/isolation & purification*; Anti-Bacterial Agents/metabolism; Anti-Bacterial Agents/pharmacology; Anti-Bacterial Agents/chemistry; Antineoplastic Agents/isolation & purification*; Antineoplastic Agents/metabolism; Antineoplastic Agents/pharmacology; Antineoplastic Agents/chemistry; Echinomycin/analogs & derivatives*; Echinomycin/isolation & purification; Echinomycin/metabolism; Echinomycin/pharmacology; Echinomycin/chemistry; Escherichia coli/drug effects*; Escherichia coli/growth & development; Humans; Microbial Sensitivity Tests; Neoplasms/drug therapy*; Staphylococcus aureus/drug effects*; Staphylococcus aureus/growth & development; Streptomyces/metabolism*; Molecular Structure; Inhibitory Concentration 50; Cell Line, Tumor; Cell Proliferation/drug effects; Mice; Small Molecule Libraries; Drug Discovery*
  13. Misron N, Harun NH, Lee YK, Sidek RM, Aris I, Wakiwaka H, et al.
    Sensors (Basel), 2014;14(2):2431-48.
    PMID: 24496313 DOI: 10.3390/s140202431
    Among palm oil millers, the ripeness of oil palm Fresh Fruit Bunch (FFB) is determined through visual inspection. To increase the productivity of the millers, many researchers have proposed with a new detection method to replace the conventional one. The sensitivity of such a sensor plays a crucial role in determining the effectiveness of the method. In our preliminary study a novel oil palm fruit sensor to detect the maturity of oil palm fruit bunches is proposed. The design of the proposed air coil sensor based on an inductive sensor is further investigated to improve its sensitivity. This paper investigates the results pertaining to the effects of the air coil structure of an oil palm fruit sensor, taking consideration of the used copper wire diameter ranging from 0.10 mm to 0.18 mm with 60 turns. The flat-type shape of air coil was used on twenty samples of fruitlets from two categories, namely ripe and unripe. Samples are tested with frequencies ranging from 20 Hz to 120 MHz. The sensitivity of the sensor between air to fruitlet samples increases as the coil diameter increases. As for the sensitivity differences between ripe and unripe samples, the 5 mm air coil length with the 0.12 mm coil diameter provides the highest percentage difference between samples and it is amongst the highest deviation value between samples. The result from this study is important to improve the sensitivity of the inductive oil palm fruit sensor mainly with regards to the design of the air coil structure. The efficiency of the sensor to determine the maturity of the oil palm FFB and the ripening process of the fruitlet could further be enhanced.
    MeSH terms: Copper; Data Collection; Fruit; Humans; Research Personnel; Arecaceae
  14. Wong SK, Lim YY, Ling SK, Chan EW
    Pharmacognosy Res, 2014 Jan;6(1):67-72.
    PMID: 24497746 DOI: 10.4103/0974-8490.122921
    Three compounds isolated from the methanol (MeOH) leaf extract of Vallaris glabra (Apocynaceae) were those of caffeoylquinic acids (CQAs). This prompted a quantitative analysis of their contents in leaves of V. glabra in comparison with those of five other Apocynaceae species (Alstonia angustiloba, Dyera costulata, Kopsia fruticosa, Nerium oleander, and Plumeria obtusa), including flowers of Lonicera japonica (Japanese honeysuckle), the commercial source of chlorogenic acid (CGA).
    MeSH terms: Methanol; Chlorogenic Acid; Quinic Acid; Apocynaceae; Nerium; Alstonia; Lonicera; Flowers
  15. Suppiah J, Mohd Zain R, Haji Nawi S, Bahari N, Saat Z
    Hepat Mon, 2014 Jan;14(1):e13173.
    PMID: 24497877 DOI: 10.5812/hepatmon.13173
    Mutations in the polymerase (P) gene of hepatitis B virus are often associated with drug resistance. The pattern of mutations varies geographically, thus giving rise to genotypes diversity.
  16. Low ET, Rosli R, Jayanthi N, Mohd-Amin AH, Azizi N, Chan KL, et al.
    PLoS One, 2014;9(1):e86728.
    PMID: 24497974 DOI: 10.1371/journal.pone.0086728
    Demand for palm oil has been increasing by an average of ∼8% the past decade and currently accounts for about 59% of the world's vegetable oil market. This drives the need to increase palm oil production. Nevertheless, due to the increasing need for sustainable production, it is imperative to increase productivity rather than the area cultivated. Studies on the oil palm genome are essential to help identify genes or markers that are associated with important processes or traits, such as flowering, yield and disease resistance. To achieve this, 294,115 and 150,744 sequences from the hypomethylated or gene-rich regions of Elaeis guineensis and E. oleifera genome were sequenced and assembled into contigs. An additional 16,427 shot-gun sequences and 176 bacterial artificial chromosomes (BAC) were also generated to check the quality of libraries constructed. Comparison of these sequences revealed that although the methylation-filtered libraries were sequenced at low coverage, they still tagged at least 66% of the RefSeq supported genes in the BAC and had a filtration power of at least 2.0. A total 33,752 microsatellites and 40,820 high-quality single nucleotide polymorphism (SNP) markers were identified. These represent the most comprehensive collection of microsatellites and SNPs to date and would be an important resource for genetic mapping and association studies. The gene models predicted from the assembled contigs were mined for genes of interest, and 242, 65 and 14 oil palm transcription factors, resistance genes and miRNAs were identified respectively. Examples of the transcriptional factors tagged include those associated with floral development and tissue culture, such as homeodomain proteins, MADS, Squamosa and Apetala2. The E. guineensis and E. oleifera hypomethylated sequences provide an important resource to understand the molecular mechanisms associated with important agronomic traits in oil palm.
    MeSH terms: Phylogeny; Plant Proteins/genetics; Transcription Factors/genetics; Genes, Plant*; Sequence Analysis, DNA; Plant Leaves/genetics; RNA, Plant/genetics; Microsatellite Repeats; DNA Methylation*; Expressed Sequence Tags; Polymorphism, Single Nucleotide; Arecaceae/genetics*; MicroRNAs/genetics; Molecular Sequence Annotation; Transcriptome; Disease Resistance/genetics; Gene Ontology
  17. Ooi JL, Van Niel KP, Kendrick GA, Holmes KW
    PLoS One, 2014;9(1):e86782.
    PMID: 24497978 DOI: 10.1371/journal.pone.0086782
    Seagrass species in the tropics occur in multispecies meadows. How these meadows are maintained through species co-existence and what their ecological drivers may be has been an overarching question in seagrass biogeography. In this study, we quantify the spatial structure of four co-existing species and infer potential ecological processes from these structures.
    MeSH terms: Algorithms; Geography; Malaysia; Marine Biology/methods*; Models, Theoretical; Population Dynamics; Species Specificity; Tropical Climate*; Video Recording; Ecosystem*; Alismatidae/classification; Alismatidae/growth & development*
  18. Teh AH, Wang Y, Dykes GA
    Can J Microbiol, 2014 Feb;60(2):105-11.
    PMID: 24498987 DOI: 10.1139/cjm-2013-0633
    Urinary tract infections (UTI) caused by uropathogenic Escherichia coli are one of the most common forms of human disease. In this study, the effect of the presence of newly acquired antibiotic resistance genes on biofilm formation of UTI-associated E. coli strains was examined. Two clinical UTI-associated E. coli strains (SMC18 and SMC20) carrying different combinations of virulence genes were transformed with pGEM-T, pGEM-T::KmΔAmp, or pGEM-T::Km to construct ampicillin-resistant (Km(S)Amp(R)), kanamycin-resistant (Km(R)Amp(S)), or ampicillin- and kanamycin-resistant (Km(R)Amp(R)) strains. Transformed and wild-type strains were characterized for biofilm formation, bacterial surface hydrophobicity, auto-aggregation, morphology, and attachment to abiotic surfaces. Transformation with a plasmid carrying an ampicillin resistance gene alone decreased (p < 0.05) biofilm formation by SMC18 (8 virulence marker genes) but increased (p < 0.05) biofilm formation by SMC20 (5 virulence marker genes). On the other hand, transformation with a plasmid carrying a kanamycin resistance gene alone or both ampicillin and kanamycin resistance genes resulted in a decrease (p < 0.05) in biofilm formation by SMC18 but did not affect (p > 0.05) the biofilm formation by SMC20. Our results suggest that transformation of UTI-associated E. coli with plasmids carrying different antibiotic resistance gene(s) had a significant impact on biofilm formation and that these effects were both strain dependent and varied between different antibiotics.
    MeSH terms: Drug Resistance, Microbial/genetics*; Escherichia coli/genetics; Escherichia coli/physiology*; Escherichia coli Infections/microbiology; Humans; Plasmids/genetics; Urinary Tract Infections/microbiology; Biofilms*
  19. Teh BA, Choi SB, Musa N, Ling FL, Cun ST, Salleh AB, et al.
    BMC Struct Biol, 2014;14:7.
    PMID: 24499172 DOI: 10.1186/1472-6807-14-7
    Klebsiella pneumoniae plays a major role in causing nosocomial infection in immunocompromised patients. Medical inflictions by the pathogen can range from respiratory and urinary tract infections, septicemia and primarily, pneumonia. As more K. pneumoniae strains are becoming highly resistant to various antibiotics, treatment of this bacterium has been rendered more difficult. This situation, as a consequence, poses a threat to public health. Hence, identification of possible novel drug targets against this opportunistic pathogen need to be undertaken. In the complete genome sequence of K. pneumoniae MGH 78578, approximately one-fourth of the genome encodes for hypothetical proteins (HPs). Due to their low homology and relatedness to other known proteins, HPs may serve as potential, new drug targets.
    MeSH terms: Amino Acid Sequence; Asparagine/metabolism; Bacterial Proteins/metabolism; Bacterial Proteins/chemistry; Cell Wall/metabolism*; Histidine/metabolism; Klebsiella pneumoniae/metabolism; Klebsiella pneumoniae/chemistry*; Models, Molecular; Protein Conformation; Zinc/metabolism*; Sequence Alignment; Genome, Bacterial; Conserved Sequence; Protein Structure, Secondary; Evolution, Molecular; Catalytic Domain; Metalloproteases/metabolism*; Metalloproteases/chemistry*
  20. Isa NK, Mat Don M
    Prep Biochem Biotechnol, 2014;44(6):572-85.
    PMID: 24499362 DOI: 10.1080/10826068.2013.844707
    The culture conditions for gibberellic acid (GA3) production by the fungus Penicillium variable (P. variable) was optimized using a statistical tool, response surface methodology (RSM). Interactions of culture conditions and optimization of the system were studied using Box-Behnken design (BBD) with three levels of three variables in a batch flask reactor. Experimentation showed that the model developed based on RSM and BBD had predicted GA3 production with R(2) = 0.987. The predicted GA3 production was optimum (31.57 mg GA3/kg substrate) when the culture conditions were at 7 days of incubation period, 21% v/w of inoculum size, and 2% v/w of olive oil concentration as a natural precursor. The results indicated that RSM and BBD methods were effective for optimizing the culture conditions of GA3 production by P. variable mycelia.
    MeSH terms: Olive Oil; Culture Media/chemistry*; Factor Analysis, Statistical; Fermentation; Gibberellins/biosynthesis*; Penicillium/metabolism*; Plant Oils/metabolism; Bioreactors
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