Browse publications by year: 2018

  1. Ruszymah Idrus, Nur Qisya Afifah Veronica Sainik, Ayu Suraya Ansari, Rabiatul Adawiyah Razali, Abid Nordin, Aminuddin Saim, et al.
    Sains Malaysiana, 2018;47:2741-2755.
    Ficus carica, a native plant to the Middle East and Western Asia, is of high value in folk medicine. The therapeutic potential
    of Ficus carica has led to the extensive studies in recent years, focusing on evaluating and validating its pharmacological
    effect. The present systematic review summarizes the effectiveness of Ficus carica on promoting bone health focusing on
    osteoporosis and rheumatoid arthritis via mineral contents and RANKL pathway. The search was done with Medline via
    Ebscohost, Scopus and Google Scholar databases to obtain relevant articles published between 1946 and December
    2016. The main inclusion criteria were research articles published in English that reported effect of Ficus carica on
    bone health. The literature search returned 716 potentially relevant articles, whereby 5 met the inclusion criteria. This
    systematic review concludes Ficus carica plays an important role in the promotion of bone health and can be a potential
    pharmaceutical product in the future.
    MeSH terms: Arthritis, Rheumatoid; Asia, Western; Medicine, Traditional; Middle East; Minerals; Osteoporosis; MEDLINE; Ficus; RANK Ligand
  2. Kong Fei Chai, Noranizan Mohd Adzahan, Roselina Karim, Yaya Rukayadi, Hasanah Mohd Ghazali
    Sains Malaysiana, 2018;47:2311-2318.
    Sweatings, the exudates that leach out from fermenting fruits during rambutan fruit fermentation are considered as
    a waste by-product and are allowed to be drained off. This could lead to a pollution problem. Besides, it is a waste if
    the sweatings are possible to be transformed into food products and ingredients. However, prior transformation, the
    fundamental knowledge of the sweatings should be understood. Hence, the main aim of this study was to investigate
    the physicochemical properties of sweatings as affected by fermentation time and turning intervals during natural
    fermentation of rambutan fruits. In this study, peeled rambutan fruit was fermented for 8 days and turned. Different
    batches of the fruits were turned every 24, 48 or 72 h and sweatings from the process were collected and analyzed.
    The results showed that fermentation time significantly reduced (p<0.05) the yield, pH and sucrose content of the
    sweatings by 79-84%, 32-33%, 76.5-80.8%, respectively. Fermentation time also significantly increased (p<0.05) the
    titratable acidity, total soluble solids, fructose, glucose, total sugar, citric acid, lactic acid, acetic acid and ascorbic
    acid contents of the sweatings by 5.6-6.0, 1.5-1.6, 2.4-2.6, 2.1-2.5, 1.0-1.1, 5.7-6.5, 2.4-2.6, 2.1-2.5 and 2.6-2.8 folds,
    respectively. However, turning intervals did not significantly affect (p>0.05) the physicochemical properties of the
    sweatings. High concentrations of sugars and organic acids allow the sweatings to have a balance of sweet and sour
    taste and they are suitable to be used in the production of syrup, soft drinks, jam, jelly, marmalade and vinegar.
    MeSH terms: Acids; Carbonated Beverages; Fermentation; Fructose; Fruit; Glucose; Sucrose; Sweating; Taste; Waste Products; Bioreactors; Acetic Acid; Citric Acid; Lactic Acid
  3. Mohamad Fairuz Yahaya, Azizi Zainodin, Reinukaa Pupathy, Edwin Ong Hock Min, Nurul Husna Abu Bakar, Nor Azimah Zamri, et al.
    Sains Malaysiana, 2018;47:2731-2739.
    A balanced interaction between osteoblast and osteoclast plays a major role in maintaining bone strength and structural
    integrity. Tocotrienol, a palm derivative with potent antioxidant properties showed an anti-osteoporotic effect but little
    is known about its mechanism of action. Hence, this research was conducted to determine the effects of palm tocotrienol
    on the surface osteoblast and osteoclast of the the glucocorticoid-induced osteoporotic bones. The study involved
    40 male Sprague-Dawley rats weighing 250-300 g which were randomly divided into an equal number of Baseline,
    Sham, Adrx+Dexa (adrenalectomized with dexamethasone), Adrx+Dexa+ATF (adrenalectomized with dexamethasone
    supplemented with α-tocopherol) and Adrx+Dexa+PTT (adrenalectomized with dexamethasone supplemented with
    palm tocotrienol). Bloods were taken prior to sacrifice for serum biomarkers and either tibia or femur was harvested
    for bone biomarkers, gene expressions analysis and histological studies. A double-blinded experiment was performed
    to calculate the number of total cells (osteoblasts and osteoclast) with intact nuclei within five fields of view. While
    serum osteocalcin and gene expression did not show any changes, CTX level was increased in the Adrx+Dexa group
    but reduced after the supplementation of palm tocotrienol. Supplementation of palm tocotrienol also significantly
    decrease the osteoclast population (p<0.05) compared to Adrx+Dexa group. In contrast, osteoblast population showed
    no significant difference across the groups. The result showed that palm tocotrienol acts by modulating the osteoclasts
    but not osteoblast, which revert the dynamics of bone cells population in the osteoporotic bone to its pre-osteoporotic
    levels. Supplements of tocotrienol in daily diet may be beneficial in preventing osteoporosis.
  4. Yeexing You, Suzana Shahar, Hasnah Haron, Hanis Mastura Yahya
    Sains Malaysiana, 2018;47:2713-2729.
    Ulam is the South East Asian traditional vegetables which contains high total phenolic content and exhibits antioxidant
    activity. Several studies have reported the potential of neuroprotective effect of ulam. The objective of this review article
    was to highlight the total phenolic content (TPC) and antioxidant activity of ulam and the roles of phenolic content that
    can contribute to attenuation of cognitive decline. The review includes randomized controlled trial and experimental
    studies from year 2007 to 2017. In this review, PRISMA method was used to report the results (n=15). Phenolic compounds,
    ie plants’ second metabolites of selected ulam in South East Asia were also discussed in this review, with respect to its
    potential for health promotion which and reducing the risk of cognitive disease. Oenanthe javanica (selom), Ocimum
    basilicum (daun selasih) and Anacardium occidentale L. (pucuk gajus) were ranked in the top three highest TPC among
    all the selected ulam. In general, Polygonum minus (kesum), Anacardium occidentale L. (pucuk gajus) and Cosmos
    caudatus (ulam raja) exhibited high DPPH radical scavenging activity whereas Anacardium occidentale L. (pucuk gajus)
    exhibited highest ferric ion reducing potential (FRAP) among all the selected ulam in South East Asia countries. Overall,
    some studies had shown Centella asiatica (pegaga), Oenanthe javanica (selom), Polygonum minus (kesum), Ocimum
    basilicum (daun selasih) and Murraya koenigii (daun kari) are beneficial in improving cognitive status and mood. The
    bioactive compounds in ulam may exhibit neuroprotective effects but human studies are still lacking in exploring the
    relationship between ulam consumption and cognitive status.
  5. Suzita Ramli, Yaya Rukayadi, Lau Kah Yan
    Sains Malaysiana, 2018;47:2301-2310.
    Spore-forming bacteria, Bacillus sp., frequently been associated with the contamination of rice and other starchy
    products. Spores are more resistant to antimicrobial treatments than its vegetative cells. The extract of Indonesian bay
    leaf (Syzygium polyanthum L.) was assessed for its antibacterial and sporicidal activities against vegetative cells and
    spores of B. cereus isolated from rice (25 strains). The results showed that S. polyanthum L. extract was able to inhibit
    the growth of vegetative cells of all B. cereus isolates with MICs ranged from 0.16 to 0.63 mg/mL and can kill with
    MBCs ranged from 0.31 to 2.50 mg/mL. The bactericidal endpoint for B. cereus BC-NP.8 in time kill curve was at 1.25
    mg/mL (8× MIC) after 4 h of incubation while for B. cereus ATCC 33019 was at 2.50 mg/mL (8× MIC). The sporicidal
    activity of S. polyanthum L. extract was not affected by different temperatures treatment and alteration of the pHs of
    extract. Therefore, this indicates that the extract was stable after exposed to pH3, 7 and 10 as well as temperature
    of 50, 80, and 121°C. Observation under on scanning electron microscope the structure of the B. cereus ATCC 33019
    spores was ruptured after being treated with 1% (w/v) S. polyanthum L. extract for 1 h. In conclusion, S. polyanthum L.
    extract had antibacterial and sporicidal activity against vegetative cells and spores of B. cereus isolated from rice.
  6. Ahmad Firdaus Khalid, Yoke KY, Jun JT
    Sains Malaysiana, 2018;47:2705-2711.
    The use of honey as a therapeutic agent dates back at 8000 years and has markedly increased interest into its potential
    health benefits. The by-products of the flower nectar have a complex chemical composition which promotes benefits in
    underlying mechanism of human diseases. Malaysian Tualang Honey (MTH) is a multifloral jungle honey produced by
    the rock bee (Apis dorsata). This review consolidates the results of carious studies involving biochemical assays of tissue
    culture and animal trials of anti-cancer properties of MTH. Often studied in the context of breast cancer cell lines, MTH
    has promising data for possible mechanisms in anti-cancer activity. These include apoptosis via depolarization of the
    mitochondrial membrane, caspase-dependent apoptosis, reduction of angiogenesis and the promotion of cell cycle arrest
    without posing cytotoxic effect on normal cell lines. Despite positive outcomes in tissue cultures, the oral administration
    of MTH in breast cancer animal models showed slower tumour progression, reduction in tumour size and better grading
    of histological features. The alleviation of breast carcinogenesis via modulation of hematologic, estrogenic and apoptotic
    activities promotes MTH as a promising anticancer agent. With confidence in a conclusion that MTH is a useful treatment
    for cancer, further experimental and clinical studies should be conducted.
    MeSH terms: Administration, Oral; Animals; Antineoplastic Agents; Bees; Breast Neoplasms; Cell Line; Honey; Humans; Apoptosis; Caspases; Models, Animal; Flowers; Mitochondrial Membranes; Plant Nectar; Cell Cycle Checkpoints; Carcinogenesis
  7. Lai WH, Mohamad Yusof Maskat
    Sains Malaysiana, 2018;47:2699-2704.
    This study was carried out to determine the effects of hydroxy propyl methyl cellulose (HPMC) on the flavour compounds
    (eugenol and limonene), moisture and oil content in chicken nuggets during frying. Chicken nugget added with 500
    ppm eugenol and limonene were coated with HPMC solution (0, 0.75 and 1.5%) and then with a commercial coating
    (ADABI, Malaysia). Chicken nuggets were fried at 180o
    C for 4 min. Quantity of eugenol and limonene in the substrate
    (chicken meat) and coating were measured alongwith the moisture and oil content. The results showed that 0.75 and
    1.5% HPMC were not able to retain either eugenol or limonene in both substrate and coating portion of the nuggets
    when compared to control except for eugenol in the substrate portion when using 1.5% HPMC. Application of HPMC
    also resulted in reduced moisture loss and oil absorption. The reduced moisture loss and oil absorption in the coating
    and substrate of the chicken nuggets showed that HPMC was able to form a barrier that restricted the migration of
    moisture from the nuggets and absorption of oil into the nuggets. However, only the 1.5% HPMC barrier formed was
    able to reduce the loss of eugenol in the nugget substrate. Both 0.75 and 1.5% HPMC was not able to significantly
    reduce the loss of limonene during frying.
    MeSH terms: Animals; Chickens; Eugenol; Flavoring Agents; Malaysia; Meat; Methylcellulose; Taste; Terpenes; Cyclohexenes
  8. Nadiya Akmal Baharum, Rofina Yasmin Othman, Boon Chin Tan, Kamilatulhusna Zaidi, Norzulaani Khalid, Nadiya Akmal Baharum, et al.
    Sains Malaysiana, 2018;47:2291-2300.
    PR-10 is a member of pathogenesis-related (PR) genes elicited by the plant’s defense mechanism during pathogen attack.
    Elevated expression of PR-10 upon different pathogen invasions has been observed in many plant species suggesting
    its role as an anti-bacterial, anti-viral and anti-fungal gene. However, the effect of PR-10 in mitigating the infection of
    Fusarium oxysporum f. sp. cubense (Foc), the causal agent of Fusarium wilt in banana has not been reported. In this
    study, the coding sequences of PR-10 gene isolated from Foc resistant Musa acuminata ssp. malaccensis (MaPR-10)
    were integrated into a local Foc susceptible commercial banana cultivar, Berangan via co-cultivation of embryogenic
    cell suspension and Agrobacterium tumefaciens. Out of 17 putative transgenic lines established, 11 of them positively
    harbored MaPR-10. Among these, Line-19 plantlets showed the most rapid in-vitro propagation and successfully overexpressed the transgene. Following a nursery challenge experiment with a virulent Foc race 4 (CI HIR) isolate, about 30%
    of Line-19 plants showed a one-week delay in disease progression when compared to the untransformed controls. From
    the final evaluation performed in the 5th week-post-inoculation, the leaf symptoms index (LSI) and rhizome discoloration
    index (RDI) of Line-19 was 3.4 and 6.1, respectively, indicating the disease had progressed. The findings of this study
    enrich the current existing knowledge on the roles of PR-10 in combating fungal disease in plants.
  9. Andi R. Rosandy, Seng JL, Jalifah Latip, Muntaz A. Bakar, Rozida M. Khalid, Munir A. Murad A, et al.
    Sains Malaysiana, 2018;47:2693-2698.
    A new dipeptide, (-)-glaciantarcin (1) and three known compounds, cyclo(-Pro-Gly) (2), 1-(2-deoxypentofuranosyl)-5-
    methyl-2,4(1H,3H)-pyrimidinedione (3) and vidarabine (Ara-A) (4), were isolated from Glaciozyma antarctica PI12,
    a cold-adapted yeast. The chemical structures were elucidated by FT-IR, NMR and mass spectrometry. The cytotoxicity
    and antioxidant activities of compounds 1-4 were evaluated by using the MTT bioassay on MCF-7 (human breast cancer
    cell line), PC-3 (human prostate cancer cell line) and HEK-293 (normal human embryonic kidney cell line) and DPPH
    free radical scavenging activity, respectively. At concentration of 400 µM, all compounds showed the highest activity
    on MCF-7, with compound 1 at 65%, compound 2 (70%), compound 3 (66%) and compound 4 (58%) cell viability. All
    compounds exhibited weak antioxidant properties. To the best of our knowledge, this is the first report of compounds
    1-4 from Glaciozyma antactica.
  10. Yee Hung Yeap, Teng Wei Koay, Boon Hoe Lim
    Sains Malaysiana, 2018;47:2269-2289.
    Engineering the CO2
    -fixing enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) to improve photosynthesis
    has long been sought. Rubisco large subunits (RbcL) are highly-conserved but because of certain undefined sequence
    differences, plant Rubisco research cannot fully utilise the robust heterologous Escherichia coli expression system and its
    GroEL folding machinery. Previously, a series of chimeric cyanobacteria Synechococcus elongatus Rubisco, incorporated
    with sequences from the green alga Chlamydomonas reinhardtii, were expressed in E. coli; differences in RbcL sections
    essential for holoenzyme formation were pinpointed. In this study, the remaining sections, presumably not crucial for
    holoenzyme formation and also the small subunit (RbcS), are substituted to further ascertain the possible destabilising
    effects of multiple section mutations. To that end, combinations of Synechococcus RbcL Sections 1 (residues 1-47), 2
    (residues 48-97), 5 (residues 198-247) and 10 (residues 448-472), and RbcS, were swapped with collinear Chlamydomonas
    sections and expressed in E. coli. Interestingly, only the chimera with Sections 1 and 2 together produces holoenzyme and
    an interaction network of complementing amino acid changes is delineated by crystal structure analysis. Furthermore,
    sequence-based analysis also highlighted possible GroEL binding site differences between the two RbcLs.
    MeSH terms: Amino Acids; Binding Sites; Carbon Dioxide; Chimera; Chlamydomonas; Escherichia coli; Mutation; Oxygenases; Photosynthesis; Ribulose-Bisphosphate Carboxylase; Ribulosephosphates; Chlamydomonas reinhardtii; Holoenzymes; Synechococcus
  11. Nurul Hidayah Yusof, Norrakiah Abdullah Sani, Farah Hannan Anuar, Mohd Suzeren Jamil, Saiful Irwan Zubairi
    Sains Malaysiana, 2018;47:2677-2683.
    Ultra-high temperature is a process that involves heating of milk to a very high temperature to produce sterile milk products.
    However, food poisoning due to consumption of UHT milk still happen in Malaysia. This study was done to develop a
    film that is made by poly(L-lactic acid) (PLLA) to detect the presence of microorganisms in UHT milk products. UHT milk
    that was used in this study was full cream milk. Contaminated milk that contained Bacillus cereus was made to conduct
    a model system on the relationship between colony forming unit of microorganisms and contact angle. Contaminated
    milk was also used as a control sample to study the difference of milk properties between fresh and contaminated milk.
    Physicochemical analysis (Brix, colour, pH and contact angle) and microbiological analysis (total plate count) were
    done to UHT milk sample as soon as the packaging of the milk was unsealed. Analysis was done with 30 min time interval
    until 4 h and 30 min since the unsealing of packaging. The results showed that presence of microorganisms in UHT milk
    was detected after the milk product was unsealed and exposed to environment for 3 h and 30 min. Contact angle resulted
    from the presence of microorganisms in UHT milk was 64.34 - 65.44° with its colony forming unit, 2.1 – 3.9 cfu/mL.
    Therefore, the potential usage of contact angle on PLLA thin film with respect to colony forming unit (cfu) in detecting
    the presence of microorganisms in UHT milk product was attained and well modelled.
  12. Mohamad Hanif Kamal Roslan, Che Aziz Ali, Kamal Roslan Mohamed
    Sains Malaysiana, 2018;47:2251-2258.
    Semakan semula litostratigrafi Formasi Singa dilakukan berdasarkan data-data baru yang diperoleh melalui kajian
    terbaru. Secara umumnya, Formasi Singa dominan dengan batu lumpur hitam yang berselang lapis dengan batu pasir
    nipis hingga sederhana tebal serta sedikit lapisan konglomerat. Kajian melibatkan analisis terhadap beberapa log
    sedimen yang telah direkodkan di lapangan. Kesemua log sedimen tersebut telah dikorelasikan untuk mendapatkan satu
    log komposit yang mewakili keseluruhan Formasi Singa. Berdasarkan kajian terperinci korelasi litologi yang dilakukan,
    cadangan litostratigrafi baru Formasi Singa mengandungi empat ahli iaitu Ahli Kentut, Ahli Ular, Ahli Selang dan Ahli
    Lembung. Ahli Kentut merupakan ahli yang paling tua diikuti dengan Ahli Ular, Ahli Selang dan Ahli Lembung. Ahli
    Ular di dalam Formasi Singa dianggap sebagai satu unit kekanta antara Ahli Kentut dengan Ahli Selang. Beberapa
    siri perubahan paras laut ditafsirkan sepanjang pengendapan batuan Formasi Singa dipercayai akibat daripada proses
    pencairan glasier yang menyebabkan paras laut meningkat dan pengendapan berterusan yang menyebabkan lembangan
    menjadi cetek dan paras laut menjadi rendah.
    MeSH terms: Color; Pallor; Tetrahydroisoquinolines
  13. Shuhib Mamat, Mohamad Faizzi, Mohd Sukor Su’ait, Norasikin Ahmad Ludin, Kamaruzzaman Sopian, Nurul Akmaliah Dzulkurnain, et al.
    Sains Malaysiana, 2018;47:2667-2676.
    Kajian terhadap elektrolit polimer berasaskan 49% poli(metil metakrilat) cangkukan getah asli (MG49) dengan
    natrium iodida (NaI) dalam aplikasi sel suria terpeka pewarna (DSSC) telah dijalankan. Kesan kepekatan garam
    ke atas sifat elektrokimia, morfologi, kimia dan kehabluran MG49-NaI telah dianalisis menggunakan spektroskopi
    impedan elektrokimia (EIS), mikroskopi imbasan elektron (SEM), spektroskopi inframerah transformasi Fourier (FTIR)
    dan pembelauan sinar-X (XRD). Morfologi keratan rentas menunjukkan struktur membran berliang mikro dan homogen.
    Nilai kekonduksian ion tertinggi pada suhu bilik bagi membran elektrolit polimer MG49-NaI pada penambahan 30 %
    bt. garam NaI adalah 8.86 × 10-5 S cm-1. Analisis inframerah menunjukkan interaksi antara atom oksigen dengan ion
    natrium berlaku pada kumpulan berfungsi eter (C–O–C) dan karbonil (C=O). Sifat kehabluran MG49-NaI polimer
    elektrolit didapati berkurang dengan peningkatan kepekatan garam. Analisis kronoamperometri memberikan nilai
    nombor pindahan ion (tion) sebanyak 0.92 membuktikan elektrolit polimer MG49-NaI (30 % bt.) adalah pengkonduksi
    jenis ion. Ujian prestasi DSSC keadaan pepejal bagi FTO/TiO2
    -N719/MG49-NaI (30 % bt.)/I2
    /Pt sampel telah memberikan
    keputusan kecekapan setinggi 0.26% dengan prestasi fotovoltaik, Jsc, Voc dan ff masing-masing adalah 1.30 mA cm-2, 0.56
    V dan 34.91. Membran dalam keadaan pepejal-kuasi atau separa pepejal memberikan nilai kecekapan 3.48 % dengan
    nilai Voc = 0.75 V, Jsc = 12.71 mA cm-2 dan FF = 37.70.
  14. Sufia Zulfa Ahmad, Yusuf Dauda Jikantoro, Norazak Senu, Fudziah Ismail, Yusuf Dauda Jikantoro
    Sains Malaysiana, 2018;47:2223-2230.
    In this paper, we develop algebraic order conditions for two-point block hybrid method up to order five using the approach
    of B-series. Based on the order conditions, we derive fifth order two-point block explicit hybrid method for solving
    special second order ordinary differential equations (ODEs), where the existing explicit hybrid method of order five is
    used to be the method at the first point. The method is then trigonometrically fitted so that it can be suitable for solving
    highly oscillatory problems arising from special second order ODEs. The new trigonometrically-fitted block method is
    tested using a set of oscillatory problems over a very large interval. Numerical results clearly showed the superiority
    of the method in terms of accuracy and execution time compared to other existing methods in the scientific literature.
    MeSH terms: Paper; Two-Hybrid System Techniques
  15. Kook Shih Ying, Lee Yook Heng, Nurul Izzaty Hassan, Siti Aishah Hasbullah
    Sains Malaysiana, 2018;47:2657-2666.
    A copper ion sensor based on a new bis-thiourea compound N1,N3-bis[[3,5-bis(trifluoromethyl)phenyl]carbamothioyl]isophthalamide (or TPC) as neutral carrier was investigated. The immobilization of the TPC into poly(n-butyl acrylate) (pBA) membrane via drop casting and the sensor was characterized by potentiometry. The sensor fabricated from TPC only showed a good Nernstian response towards copper ion with a sensitivity slope of 28.81±0.53mV/decade in the range of 1.0 × 10-6 - 1.0 × 10-4 M. The limit of detection of this sensor was found to be 6.11 × 10-7 M and with short sensor response time (60 - 80 s). This sensor also demonstrated reversibility and reproducibility with 3.69% and 1.84% (Relative Standard Deviation, RSD), respectively. Based on the separate solution method (SSM), the logarithm selectivity coefficients were better than -2.00 for monovalent, divalent and trivalent cations and this confirmed that the sensor exhibited good selectivity towards copper ion. The sensor could attain optimum function without the need in the inclusion of either lipophilic anions as a membrane additive nor plasticizer as a membrane softener. Thus, these are the main advantages. The addition of lipophilic anions into the pBA membrane could cause the sensitivity and selectivity of the copper ion sensor based on ionophore TPC to deteriorate.
  16. Anuar Jamaludin, Roslinda Nazar, Ioan Pop
    Sains Malaysiana, 2018;47:2213-2221.
    In this study, the effects of suction and injection on the mixed convection flow of a nanofluid, over a moving permeable
    vertical plate were discussed. A similarity variable was used to transform the governing equations to the ordinary
    differential equations, which were then solved numerically using the bvp4c programme from MATLAB. Dual solutions
    (upper and lower branches) were found within a certain range of the mixed convection parameter in assisting and
    opposing flow regions. A stability analysis was implemented to confirm that the upper branch solution was stable, while
    the lower branch solution was unstable.
    MeSH terms: Injections; Suction; Convection; Physical Phenomena; Hydrodynamics
  17. Suraiya Mostafiz, Alina Wagiran, Nur Syafiqoh Johan, Nur Saliha Abdllah Zulkifli, Ng JM
    Sains Malaysiana, 2018;47:2647-2655.
    The development of an efficient tissue culture protocol for somatic embryo would facilitate the genetic modification in
    breeding program. The present study describes the reproducible protocols for three wetland Malaysian rice cultivars
    (MR232, MR220 and MR220-CL2) and upland rice (Bario) via somatic embryogenesis. In the present study, four preheat treatments (35, 40, 45 and 50°C) were applied to mature seeds with different imbibition periods (3, 5 and 7 days)
    prior to culture on MS media with 3 mg/L 2,4-D. The results showed that the cultivars exhibited the highest callus
    induction percentage from 45°C pre-heated seeds and 3 days imbibition (100%, 96%, 100% and 95% for MR232, MR220,
    MR220-CL2 and Bario, respectively). Callus was induced early ranging from 3 to 12 days compared to without pre-heat
    treatment. The regeneration efficiency for MR220 and MR220-CL2 cultivars was significantly higher compared to the
    control treatment. However, both 45°C and 25°C (control) treatments produced higher plantlet regeneration for MR232
    and Bario. This study observed that pre-heat treated seeds prior to callus induction did promote callusing and hence
    regeneration. These findings can be used to establish a suitable protocol for the in vitro regeneration system for several
    genetic improvements in the numerous stress tolerances of Malaysian rice.
  18. Azhar Ahmad, Gobithaasan R
    Sains Malaysiana, 2018;47:2205-2211.
    A quadratic Bézier representation withholds a curve segment with free from loops, cusps and inflection points. Furthermore,
    this rational form provides extra freedom to generate visually pleasing curves due to the existence of weights. In this
    paper, we propose sufficient conditions for rational quadratic Bézier curves to possess monotonic increasing/decreasing
    curvatures by means of monotone curvature tests which are based on the derivative of curvature functions. We have
    derived a simple interval of the middle weight that assures the construction of a family of rational quadratic Bézier curves
    to be planar spirals, which is characterized by the turning angle, end curvatures and the chords of control polygon.
    The proposed formulation can be used by CAD systems for aesthetic product design, highway/railway design and robot
    trajectory design avoiding unwanted curvature oscillations.
  19. Izhar Hussain, Sher Aslam Khan, Abid Farid, Naushad Ali, Sardar Ali, Shah Masaud, et al.
    Sains Malaysiana, 2018;47:2637-2645.
    It is of great importance to know about the genetic diversity, conservation and classification for further utilization of
    tomato germplasm resources. Therefore, 40 tomato accessions were evaluated on the basic of agro-morphological traits
    for genetic diversity in 2014. The experiment was conducted at Agricultural Research Farm, University of Haripur and
    farmer field in Swabi, Khyber Pakhtunkhwa, Pakistan. Principal component analysis showed that five out of 27 principal
    components with an eigenvalue above 1.0 were considered for 74.10% of the total variance. The major contributing traits
    in variations were days to flowering (DFL), days to fruiting (DFR), fruit size (FS), fruit weight plant-1 (FW), yield plot-1 (YPP),
    yield hectare-1 (YPH), leaf length (LL), predominant fruit shape (PDFS), fruit length (FL), fruit width (FWidth), clusters
    plant-1 (CPP), fruits plant-1
    (FPP) and plant height (PH). The scattered plot of the PC’s revealed that the accessions were
    scattered in all the quarters, which is also a representative that high level of genetic variability was present. FW and FL
    were positively correlated with YPH. However, the remaining yield components indirectly contributed YPH. Cluster analysis
    divided 40 accessions into four main clusters (I, II, III and IV), each of which having 12, 11, 07 and 10 accessions. The
    accessions in clusters I and II were statistically similar and performed better in terms of yield and yield related traits.
    Grouping into different clusters was associated with their agro-morphological differences. These results could be serving
    as a useful resource for further characterization, preservation and breeding programs.
  20. Muhammad Asmu’i Abdul Rahim, Siti Meriam Zahari, Sarifah Radiah Shariff
    Sains Malaysiana, 2018;47:2195-2204.
    The application of the Variance Targeting Estimator (VTE) is considered in GJR-GARCH(1,1) model, under three
    misspecification scenarios, which are, model misspecification, initial parameters misspecification and innovation
    distribution assumption misspecification. A simulation study has been performed to evaluate the performance of VTE
    compared to commonly used, which is the Quasi Maximum Likelihood Estimator (QMLE). The data has been simulated
    under GJR-GARCH(1,1) process with initial parameters ω = 0.1, α = 0.05, β = 0.85, γ = 0.1 and an innovation with a
    true normal distribution. Three misspecification innovation assumptions, which are normal distribution, Student-t
    distribution and the GED distribution have been used. Meanwhile, for the misspecified initial parameters, the first initial
    parameters have been setup as ω = 1, α = 0, β = 0 and γ = 0. Furthermore, the application of VTE as an estimator has
    also been evaluated under real data sets and three selected indices, which are the FTSE Bursa Malaysia Kuala Lumpur
    Index (FBMKLCI), the Singapore Straits Time Index (STI) and the Jakarta Composite Index (JCI). Based on the results, VTE
    has performed very well compared to QMLE under both simulation and the applications of real data sets, which can be
    considered as an alternative estimator when performing GARCH model, especially the GJR-GARCH.
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