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On poisoning by sodium cyanide

Willimott SG

Journal of the Malaya Branch of the British Medical Association, 1941;4:438-44.

Matched MeSH terms: Sodium Cyanide
A randomized controlled trial of trigger finger release under digital anesthesia with (WALANT) and without adrenaline

Mohd Rashid MZ, Sapuan J, Abdullah S

J Orthop Surg (Hong Kong), 2019 3 12;27(1):2309499019833002.
PMID: 30852960 DOI: 10.1177/2309499019833002

BACKGROUND:: Trigger finger release utilizing wide-awake local anesthesia no tourniquet (WALANT) usage in extremity surgery is not widely used in our setting due to the possibility of necrosis. Usage of a tourniquet is generally acceptable for providing surgical field hemostasis. We evaluate hemostasis score, surgical field visibility, onset and duration of anesthesia, pain score, and the duration of surgery and potential side effects of WALANT.
METHODS:: Eighty-six patients scheduled for trigger finger release between July 2016 and December 2017 were randomized into a control group (1% lignocaine and 8.4% sodium bicarbonate with arm tourniquet; given 10 min prior to procedure) and an intervention group (1% lignocaine, 1:100,000 of adrenaline and 8.4% sodium bicarbonate; given 30 min prior to procedure), with a total of 4 ml of solution injected around the A1 pulley. The onset of anesthesia and pain score upon injection of the first 1 ml were recorded. After the procedure, the surgeon rated for the hemostasis score (1-10: 1 as no bleeding and 10 being profuse bleeding). Duration of surgery and return of sensation were recorded.
RESULTS:: Hemostasis score was grouped into visibility score as 1-3: good, 4-6: moderate, and 7-10: poor. The intervention group (with adrenaline) had a 74% of good surgical field visibility compared to 44% from the controlled group (without adrenaline; p < 0.05). Duration of anesthesia was longer in the intervention group (with adrenaline), with a 2.77-h difference.
CONCLUSION:: WALANT provides excellent surgical field visibility and is safe and on par with conventional methods but without the usage of a tourniquet and its associated discomfort.

Matched MeSH terms: Sodium Bicarbonate
Fulltext Isolation and Partial Characterisation of Thermophilic Cellulolytic Bacteria from North Malaysian Tropical Mangrove Soil

Naresh S, Kunasundari B, Gunny AAN, Teoh YP, Shuit SH, Ng QH, et al.

Trop Life Sci Res, 2019 Jan;30(1):123-147.
PMID: 30847037 MyJurnal DOI: 10.21315/tlsr2019.30.1.8

This study reports the biodiversity of thermophilic cellulolytic bacterial strains that present in the north Malaysian mangrove ecosystem. Soil samples were collected at the four most northern state of Malaysia (Perak, Pulau Pinang, Kedah and Perlis). The samples obtained were first enriched in nutrient broth at 45°C and 55°C prior culturing in the carboxymethylcellulose (CMC) agar medium. Repeated streaking was performed on the CMC agar to obtain a pure culture of each isolate prior subjecting it to hydrolysis capacity testing. The isolates that showing the cellulolytic zone (halozone) were sent for 16S rRNA sequencing. Total seven isolates (two from Perak, three from Kedah, another two were from Perlis and Penang each) showed halozone. The isolate (KFX-40) from Kedah exhibited highest halozone of 3.42 ± 0.58, meanwhile, the one obtained from Perak (AFZ-0) showed the lowest hydrolysis capacity (2.61 ± 0.10). Based on 16S rRNA sequencing results, 5 isolates (AFY-40, AFZ-0, KFX-40, RFY-20, and PFX-40) were determined to be Anoxybacillus sp. The other two isolates were identified as Bacillus subtilis (KFY-40) and Paenibacillus dendritiformis (KFX-0). Based on growth curve, doubling time of Anoxybacillus sp. UniMAP-KB06 was calculated to be 32.3 min. Optimal cellulose hydrolysis temperature and pH of this strain were determined to be 55°C and 6.0 respectively. Addition of Mg2+ and Ca2+ were found to enhance the cellulase activity while Fe3+ acted as an enzyme inhibitor.

Matched MeSH terms: Carboxymethylcellulose Sodium
Fulltext Endophytic Bacteria Isolated from Citrus Plants for Biological Control of Citrus Canker in Lime Plants

Daungfu O, Youpensuk S, Lumyong S

Trop Life Sci Res, 2019 Jan;30(1):73-88.
PMID: 30847034 DOI: 10.21315/tlsr2019.30.1.5

Citrus canker caused by Xanthomonas citri subsp. citri is a disease affecting the yield and fruit quality of lime (Citrus aurantiifolia). This research investigated endophytic bacteria obtained from six healthy Citrus spp. to inhibit the pathogen and to control citrus canker on lime plants. Numbers of the endophytic bacteria isolated from C. aurantifolia, C. hystrix, C. maxima, C. nobilis, C. reticulata and C. sinensis were 28, 25, 29, 42, 12 and 34 isolates, respectively. The selected endophytic bacteria that were effective against X. citri subsp. citri were Bacillus amyloliquefaciens LE109, B. subtilis LE24 and B. tequilensis PO80. The optimum culture medium for an antagonistic effect on the pathogen in B. amyloliquefaciens LE109 and B. tequilensis PO80 was yeast extract peptone dextrose broth, and in B. subtilis LE24 was modified soluble starch broth. To control citrus canker in lime, young expanded leaves of lime plants were aseptically punctured and inoculated with 30 μl of bacterial suspension of the pathogen (108 CFU/ml in 0.85% NaCl) per punctured location. After the pathogenic inoculation for 24 h, the leaves were then inoculated with 30 μl of the selected endophytic bacteria (108 CFU/ml in 0.85% NaCl), and treated with 30 μl of the culture media containing bioactive compounds produced by the selected endophytic bacteria. The leaves inoculated with cell suspensions of B. amyloliquefaciens LE109 or B. subtilis LE24 could completely control citrus canker. However, the leaves inoculated with B. tequilensis PO80 displayed 10% disease incidence. Additionally, the leaves treated with the crude bioactive compounds of B. amyloliquefaciens LE109 or B. subtilis LE24 could completely control citrus canker. Notably, the leaves treated with the crude bioactive compounds of B. tequilensis PO80 displayed 5% disease incidence. The results of this study showed that the Bacillus strains play important roles in the biocontrol of citrus canker in lime.

Matched MeSH terms: Sodium Chloride
Fulltext In vitro evaluation of octenidine as an antimicrobial agent against Staphylococcus epidermidis in disinfecting the root canal system

Chum JD, Lim DJZ, Sheriff SO, Pulikkotil SJ, Suresh A, Davamani F

Restor Dent Endod, 2019 Feb;44(1):e8.
PMID: 30834230 DOI: 10.5395/rde.2019.44.e8

Objectives: Irrigants are imperative in endodontic therapy for the elimination of pathogens from the infected root canal. The present study compared the antimicrobial efficacy of octenidine dihydrochloride (OCT) with chlorhexidine (CHX) and sodium hypochlorite (NaOCl) against Staphylococcus epidermidis (S. epidermidis) for root canal disinfection.
Materials and Methods: The minimum inhibitory concentration (MIC) was obtained using serial dilution method. The agar diffusion method was then used to determine the zones of inhibition for each irrigant. Lastly, forty 6-mm dentin blocks were prepared from human mandibular premolars and inoculated with S. epidermidis. Samples were randomly divided into 4 groups of 10 blocks and irrigated for 3 minutes with saline (control), 2% CHX, 3% NaOCl, or 0.1% OCT. Dentin samples were then collected immediately for microbial analysis, including an analysis of colony-forming units (CFUs).
Results: The MICs of each tested irrigant were 0.05% for CHX, 0.25% for NaOCl, and 0.0125% for OCT. All tested irrigants showed concentration-dependent increase in zones of inhibition, and 3% NaOCl showed the largest zone of inhibition amongst all tested irrigants (p < 0.05). There were no significant differences among the CFU measurements of 2% CHX, 3% NaOCl, and 0.1% OCT showing complete elimination of S. epidermidis in all samples.
Conclusions: This study showed that OCT was comparable to or even more effective than CHX and NaOCl, demonstrating antimicrobial activity at low concentrations against S. epidermidis.

Matched MeSH terms: Sodium Hypochlorite
Fulltext Assessment of Polyacrylamide Based Co-Polymers Enhanced by Functional Group Modifications with Regards to Salinity and Hardness

Akbari S, Mahmood SM, Tan IM, Ghaedi H, Ling OL

Polymers (Basel), 2017 Nov 27;9(12).
PMID: 30965947 DOI: 10.3390/polym9120647

This research aims to test four new polymers for their stability under high salinity/high hardness conditions for their possible use in polymer flooding to improve oil recovery from hydrocarbon reservoirs. The four sulfonated based polyacrylamide co-polymers were FLOCOMB C7035; SUPERPUSHER SAV55; THERMOASSOCIATIF; and AN132 VHM which are basically sulfonated polyacrylamide copolymers of AM (acrylamide) with AMPS (2-Acrylamido-2-Methylpropane Sulfonate). AN132 VHM has a molecular weight of 9⁻11 million Daltons with 32 mol % degree of sulfonation. SUPERPUSHER SAV55 mainly has about 35 mol % sulfonation degree and a molecular weight of 9⁻11 million Daltons. FLOCOMB C7035, in addition, has undergone post-hydrolysis step to increase polydispersity and molecular weight above 18 million Daltons but it has a sulfonation degree much lower than 32 mol %. THERMOASSOCIATIF has a molecular weight lower than 12 million Daltons and a medium sulfonation degree of around 32 mol %, and also contains LCST (lower critical solution temperature) type block, which is responsible for its thermoassociative characteristics. This paper discusses the rheological behavior of these polymers in aqueous solutions (100⁻4500 ppm) with NaCl (0.1⁻10 wt %) measured at 25 °C. The effect of hardness was investigated by preparing a CaCl₂-NaCl solution of same ionic strength as the 5 wt % of NaCl. In summary, it can be concluded that the rheological behavior of the newly modified co-polymers was in general agreement to the existing polymers, except that THERMOASSOCIATIF polymers showed unique behavior, which could possibly make them a better candidate for enhanced oil recovery (EOR) application in high salinity conditions. The other three polymers, on the other hand, are better candidates for EOR applications in reservoirs containing high divalent ions. These results are expected to be helpful in selecting and screening the polymers for an EOR application.

Matched MeSH terms: Sodium Chloride
Fulltext Effect of Aging, Antioxidant, and Mono- and Divalent Ions at High Temperature on the Rheology of New Polyacrylamide-Based Co-Polymers

Akbari S, Mahmood SM, Tan IM, Ling OL, Ghaedi H

Polymers (Basel), 2017 Oct 04;9(10).
PMID: 30965788 DOI: 10.3390/polym9100480

The viscosity of four new polymers was investigated for the effect of aging at high temperature, with varying degrees of salinity and hardness. The four sulfonated based polyacrylamide co-polymers were FLOCOMB C7035; AN132 VHM; SUPERPUSHER SAV55; and THERMOASSOCIATIF copolymers. All polymer samples were aged at 80 °C for varying times (from zero to at least 90 days) with and without isobutyl alcohol (IBA) as an antioxidant. To see the effect of divalent ions on the polymer solution viscosity, parallel experiments were performed in a mixture of CaCl₂-NaCl of the same ionic strength as 5 wt % NaCl. The polymers without IBA showed severe viscosity reduction after aging for 90 days in both types of preparation (5 wt % NaCl or CaCl₂-NaCl). In the presence of IBA, viscosity was increased when aging time was increased for 5 wt % NaCl. In CaCl₂-NaCl, on the other hand, a viscosity reduction was observed as aging time was increased. This behavior was observed for all polymers except AN132 VHM.

Matched MeSH terms: Sodium Chloride
Fulltext Preparation and swelling study of CMC hydrogel as potential superabsorbent

Nur Fitrah Che Nan, Norhazlin Zainuddin, Mansor Ahmad

Pertanika Journal of Science & Technology, 2019;27(1):489-498.
MyJurnal

Carboxymethylcellulose (CMC) is a water-soluble polymer, which is widely used in various
fields such as food additives, textiles, pharmaceuticals and cosmetics. In this study, hydrogel
was prepared from CMC by using calcium chloride as a crosslinking agent. Optimization
of the reaction was done through investigation of four different parameters which had
different percentage of CMC (w/v), percentage of calcium chloride (w/v), reaction time and
temperature. The gel content and swelling properties of the CMC hydrogel were studied.
The highest gel content was 85.33% at 7% of CMC (w/v) with 2% of calcium chloride (w/v)
in 24 hours reaction time at room temperature. The gel content increased with the increasing
concentration of CMC and CaCl2. This was due to the higher number of functional groups
of COO- that were available in more concentrated CMC which could crosslink with CaCl2
to give higher gel content. Increasing the percentage of CaCl2 will increase the electrostatic
attraction between anionic charges of polymer chains and multivalent cation (Ca2+) that
leads to increase in ionic crosslinking of CMC. The swelling properties of CMC hydrogel
showed that the optimum degree of swelling was 45.33 (g/g). The swelling capacity of the
hydrogel in water decreased with the increase of the gel content of CMC hydrogel. This
could be due to the increase in the degree of crosslinking of the CMC hydrogel.

Matched MeSH terms: Carboxymethylcellulose Sodium
Fulltext Unique Halloysite Nanotubes⁻Polyvinyl Alcohol⁻Polyvinylpyrrolidone Composite Complemented with Physico⁻Chemical Characterization

Gaaz TS, Kadhum AAH, Michael PKA, Al-Amiery AA, Sulong AB, Nassir MH, et al.

Polymers (Basel), 2017 Jun 06;9(6).
PMID: 30970887 DOI: 10.3390/polym9060207

A halloysite nanotubes⁻polyvinyl alcohol⁻polyvinylpyrrolidone (HNTs⁻PVA⁻PVP) composite has been investigated for a quite long time aiming at improving the physico⁻chemical characterization of HNTs. In this work, HNTs⁻PVA⁻PVP composite were prepared based on a unique procedure characterized by crosslinking two polymers with HNTs. The composite of two polymers were modified by treating HNTs with phosphoric acid (H₃PO₄) and by using malonic acid (MA) as a crosslinker. The composite was also treated by adding the dispersion agent sodium dodecyl sulfate (SDS). The HNTs⁻PVA⁻PVP composite shows better characteristics regarding agglomeration when HNTs is treated in advance by H₃PO₄. Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), transmission electron microscopy (TEM), field emission scanning electron microscopy (FESEM), brunauer⁻emmett⁻teller (BET), size distribution, and atomic force microscopy (AFM) are used to characterize the physio-chemical properties of the composite. FTIR shows additional peaks at 2924.29, 1455.7, and 682.4 cm-1 compared to the neat HNTs due to adding MA. Despite that, the XRD spectra do not show a significant difference, the decrease in peak intensity could be attributed to the addition of semi-crystalline PVA and the amorphous PVP. The images taken by TEM and FESEM show the possible effects of MA on the morphology and internal feature of HNTs⁻PVA⁻PVP composite treated by MA by showing the deformation of the matrix. The BET surface area increased to 121.1 m²/g compared to the neat HNTs at 59.1 m²/g. This result, the second highest recorded result, is considered a breakthrough in enhancing the properties of HNTs⁻PVA⁻PVP composite, and treatment by MA crosslinking may attribute to the size and the number of the pores. The results from these techniques clearly showed that a significant change has occurred for treated HNTs⁻PVA⁻PVP composite where MA was added. The characterization of HNTs⁻PVA⁻PVP composite with and without treating HNTs and using crosslinker may lead to a better understanding of this new composites as a precursor to possible applications in the dentistry field.

Matched MeSH terms: Sodium Dodecyl Sulfate
Fulltext Mutagenicity and antimutagenic activities of lactic acid bacteria (LAB) isolated from fermented durian (tempoyak)

Asmariah Ahmad, Safura Salik, Yap Wei Boon, Ahmad Rohi Ghazali, Noorhisham Tan Kofli

Jurnal Sains Kesihatan Malaysia, 2018;16(101):23-26.
MyJurnal

Mutagenic and antimutagenic activities of lactic acid bacteria (LAB) Lactobacillus plantarum isolated from the local fermented durian (tempoyak) was determined by Ames test (Salmonella/microsome mutagenicity assay). Our study also involved pre-incubation assay against Salmonella typhimurium TA 98 and TA 100 bacterial strain in the presence and absence of metabolic activator S9 system. It was found that the L. plantarum showed no mutagenic activity on both S. typhimurium strain TA 98 and TA 100 in the presence and absence of metabolic activator. Significant antimutagenic activity (p < 0.05) was observed in both cell-free supernatant and bacterial cell suspension of L. plantarum as compared to the mutagenicity induced by 2-Aminoanthracene in the presence of metabolic activator. Meanwhile, in the absence of metabolic activator, only the bacterial cells of L. plantarum showed antimutagenicity acitivity against Sodium Azide and 2-Nitrofluorene. In conclusion, L. plantarum could play a vital role as chemopreventive agent by binding to mutagens and suppressing mutagenesis. Thus, L. plantarum could be consider as a good candidate for functional food development as a supplement product to prevent development of colon cancer.

Matched MeSH terms: Sodium Azide
Isolation and fractionation of cellulose nanocrystals from kenaf core

Hanisah Syed Sulaiman, Chin HC, Chan CH, Sarani Zakaria, Sharifah Nabihah Syed Jaafar

Sains Malaysiana, 2015;44:1635-1642.

In this study, cellulose nanocrystals (CNC) were produced using acid hydrolysis method. Kenaf core was pretreated with 4
wt. % sodium hydroxide (NaOH), followed by bleaching using 1.7 wt. % sodium chlorite (NaClO2
) in acetate buffer. The
bleached fiber was acid hydrolyzed for 45 and 55 min using 64 wt. % sulfuric acid (H2
SO4
). The size distribution of the
CNC segregated via differential centrifugation with different speed was also investigated. The CNC suspension obtained
was centrifuged at 3000, 6000, 9000 and 12000 rpm. The resultant CNC suspension collected was characterized using
Fourier transform infrared (FTIR) analysis, X-ray diffraction (XRD) and transmission electron microscopy (TEM). FTIR
results showed the progressive removal of non-cellulosic constituents for each subsequent treatment. It also showed that
the CNC produced after hydrolysing for 55 min has the highest degree of crystallinity (81.15%). CNC produced from acid
hydrolysis process of 45 min have lengths between 50 and 270 nm while CNC produced from acid hydrolysis process of
55 min have length around 40 to 370 nm.

Matched MeSH terms: Sodium Hydroxide
Nutritional composition of selected commercial biscuits in Malaysia

Norhayati M, Mohd Fairulnizal M, Aswir A, Ang J, Mohd Naeem M, Suraiami M, et al.

Sains Malaysiana, 2015;44:581-591.

The objective of this study was to determine the nutrient composition of selected commercial biscuits in Malaysia. A total
of six brands from each type of biscuit (chocolate chip, corn, cracker with sugar, vegetable flavoured cracker, cream
filled, oatmeal, shortbread and fully coated chocolate wafer) and five brands of wholemeal crackers were sampled
from local supermarkets in the Klang Valley. The total energy content in commercial biscuits was ranging from 453.30
to 499.25 kcal/100 g. Carbohydrate was the major macronutrient in commercial biscuits ranging from 56.86 to 66.07
g/100 g. The highest protein content was found in the wholemeal crackers (9.92 g/100 g) and the lowest protein content
was found in the cream filled biscuits (5.65 g/100 g). Fat content lay in the range of 16.89 to 25.75 g/100 g. The major
minerals detected in biscuits were sodium, followed by calcium and magnesium. The vitamin content in A and E of the
biscuits examined was almost comparable. Small quantities of trans fatty acids were detected in all biscuits in the range
of 0.02 to 0.68 g/100 g. These findings indicate that Malaysian commercial biscuits are a good source of carbohydrate
(34.12-39.64 g per serving), calcium (26.09-384.67 g per serving), magnesium (10.42-37.24 g per serving) and contain
low proportion of trans fatty acids (0.01-0.41 g per serving).

Matched MeSH terms: Sodium
Effect of space holders on fabrication of porous titanium alloy-hydroxyapatite composite through powder injection molding

Farrahshaida Mohd Salleh, Abu Bakar Sulong, Muhammad Rafi Raza, Norhamidi Muhamad, Lim TF

Sains Malaysiana, 2017;46:1651-1657.

owder injection molding (PIM) is able to produce porous titanium alloy/hydroxyapatite composite through the space holder technique. Thermal debinding and sintering processes were the main challenges due to different properties of metal and ceramic in producing such composite. This study focused on the effect of different space holders on the physical and mechanical properties of debound and sintered porous titanium aloi/hydroxyapatite composite. The feedstock is containing of 80 wt. % of titanium alloy/hydroxyapatite with 20 wt. % of space holders such as sodium chloride (NaCl) and polymethylmethacrylate (PMMA), respectively. The binders were then removed from the injected samples by two stages of debinding; solvent and thermal debinding. The sintering was performed at three different temperatures 1100oC, 1200oC and 1300oC at a heating rate of 10oC /min and holding time of 5 h. It was found that the samples containing PMMA space holder was fractured after sintering. While, the samples containing NaCl space holder successfully formed pores and not fractured. At sintering temperature of 1300oC, the density, compressive strength and porosity volume percentages for the sintered sample containing NaCl space holder were 3.05 g/cm3, 91.7 MPa. and 11.9 vol%, respectively.

Matched MeSH terms: Sodium Chloride
Anticorrosive properties of nano silicate from paddy husk in salt medium

Norinsan Kamil Othman, Solhan Yahya, Denni Asra Awizar

Sains Malaysiana, 2016;45:1253-1258.

Anticorrosive properties of nano silicate from paddy husk in salt medium was investigated via weight loss method, Tafel
polarization and impedance techniques. Prior to the corrosion test, the silica powder was obtained from burning the
rice husk and extended with a chemical treatment process. The size of silica powder was characterized via zeta sizer and
showed the amount of micro silica particle appear more than the nano size particle. Nano silica powder was produced
from the refluxing process of micro silica to enhance the good properties of silica particle. The corrosion inhibition
efficiency of nano silicate showed good inhibition with increased in inhibitor concentrations. Weight loss test exhibits
high inhibition as more than 80% even, immersed in the corrosive medium until 14 days. The nano silicate inhibitor
affected the anodic reaction as showed by Tafel plot analysis. Impedance results also correlated with other test as shown
by the large size of Nyquist semicircle which represents as high resistance of charge transfer. The surface morphology
of inhibited specimen showed a smooth surface after nano silicate inhibitor applied in the NaCl medium as observed
through scanning electron microscopy (SEM) and energy-dispersive x-ray spectroscopy (EDX).

Matched MeSH terms: Sodium Chloride
Physico-mechanical properties of kenaf pulp cellulose membrane cross-linked with glyoxal

Anis Syuhada Mohd Saidi, Chin HC, Sharifah Nabihah Syed Jaafar, Farah Nadia Mohammad Padzil, Sarani Zakaria

Sains Malaysiana, 2016;45:263-270.

Cellulose was extracted from kenaf core pulp (KCP) by a series of bleaching processes (D) and alkali treatment (E) in the sequence of (DEED) and pretreated with acid hydrolysis in room temperature for 6 hours. The pretreated and non-treated cellulose were dissolved in lithium hydroxide/urea (LiOH/urea) and subsequently used to produce cellulose membrane cross linked with various percentages of glyoxal from 2.5 to 20%. The effects of acid hydrolysis pretreatment on solubility, crystallinity and morphology were investigated. The acid hydrolysis pretreatment leads to higher solubility of the cellulose solution. The formation of cellulose II and crystallinity index of the cellulose membrane were examined by X-ray diffraction (XRD). Cellulose membrane without acid hydrolysis pretreatment cross linked with higher percentage of glyoxal has higher tensile strength compared with the treated cellulose.

Matched MeSH terms: Sodium Compounds
Proteomic analysis of stored core oil palm trunk (COPT) sap identifying proteins Related to stress, disease resistance and differential gene/protein expression

Marhaini Mostapha, Noorhasmiera Abu Jahar, Sarani Zakaria, Sharifah Nabihah Syed Jaafar, Kamalrul Azlan Azizan, Wan Mohd Aizat

Sains Malaysiana, 2018;47:1259-1268.

Oil palm is the major crop grown and cultivated in various Asian countries such as Malaysia, Indonesia and Thailand.
The core of oil palm trunk (COPT) consists of high sugar content, hence suitable for synthesis of fine chemicals and
biofuels. Increase of sugar content was reported previously during prolonged COPT storage. However, until now, there
has been no report on protein profiles during storage. Therefore, in this study, protein expression of the COPT during the
storage period of one to six weeks was investigated using sodium dodecyl sulphate polyacrylamide gel electrophoresis
(SDS-PAGE) coupled with optical density quantification and multivariate analyses for measuring differentially expressed
proteins. Accordingly, protein bands were subjected to tryptic digestion followed by tandem mass spectrometry (nanoLCMS/MS)
protein identification. The results from SDS-PAGE showed consistent protein bands appearing across the biological
replicates ranging from 10.455 to 202.92 kDa molecular weight (MW) regions. The findings from the principal component
analysis (PCA) plot illustrated the separation pattern of the proteins at weeks 4 and 5 of storage, which was influenced
mainly by the molecular weights of 14.283, 25.543, 29.757, 30.549, 31.511, 34.585 and 84.395 kDa, respectively. The
majority of these proteins are identified as those involved in stress- and defense-related, disease resistance, as well
as gene/protein expression processes. Indeed, these proteins were mostly upregulated during the later storage period
suggesting that long-term storage may influence the molecular regulation of COPT sap.

Matched MeSH terms: Sodium Dodecyl Sulfate
Captan utilization by a soil bacterium planomicrobium flavidum strain EF

Eman Mohamed, Fatma Ahmad Mostafa

Sains Malaysiana, 2018;47:85-89.

The fungicide captan, which is commonly used to control fungal diseases in many plants, causes soil infertility and cancer to human beings. Hence, this fungicide was tested for utilization as a sole carbon source by a newly soil isolate, Planomicrobium flavidum strain EF. This bacterium resists captan up to 2000 ppm and showed higher growth patterns in minimum salt medium supplemented with captan only, if compared with minimum salt medium without captan. Moreover, almost 77.5% of captan has been utilized by Planomicrobiu flavidum after only 2 h of growth under shaking conditions and only 0.8% of the fungicide was remained after 24 h of bacterial growth. Captan residues in both soil samples and minimal salt medium were accurately estimated using GC-ECD (gas chromatography - electron detector) and GC-MS/MS (gas chromatography - mass spectrum) technologies. According to current results, Planomicrobium flavidum strain EF is highly recommended for captan and may be other fungicides bioremediation.

Matched MeSH terms: Sodium Chloride, Dietary
Fulltext Performance of Fly Ash Geopolymer Concrete Incorporating Bamboo Ash at Elevated Temperature

Ishak S, Lee HS, Singh JK, Ariffin MAM, Lim NHAS, Yang HM

Materials (Basel), 2019 Oct 17;12(20).
PMID: 31627479 DOI: 10.3390/ma12203404

This paper presents the experimental results on the behavior of fly ash geopolymer concrete incorporating bamboo ash on the desired temperature (200 °C to 800 °C). Different amounts of bamboo ash were investigated and fly ash geopolymer concrete was considered as the control sample. The geopolymer was synthesized with sodium hydroxide and sodium silicate solutions. Ultrasonic pulse velocity, weight loss, and residual compressive strength were determined, and all samples were tested with two different cooling approaches i.e., an air-cooling (AC) and water-cooling (WC) regime. Results from these tests show that with the addition of 5% bamboo ash in fly ash, geopolymer exhibited a 5 MPa (53%) and 5.65 MPa (66%) improvement in residual strength, as well as 940 m/s (76%) and 727 m/s (53%) greater ultrasonic pulse velocity in AC and WC, respectively, at 800 °C when compared with control samples. Thus, bamboo ash can be one of the alternatives to geopolymer concrete when it faces exposure to high temperatures.

Matched MeSH terms: Sodium Hydroxide
Fulltext Edible mushrooms from malaysia; a literature review on their nutritional and medicinal properties

Samsudin, N.I.P., Abdullah, N.

International Food Research Journal, 2019;26(1):11-31.
MyJurnal

Mushrooms have been consumed by mankind for millennia. In Malaysia, there are many species of edible mushrooms which are either cultivated (Agaricus spp., Auricularia spp., Pleurotus spp.) or harvested in the wild (Ganoderma spp., Polyporus spp., Termitomyces spp.). With the advancement of technology, numerous discoveries have been made that elucidated the nutritional (high in fibres, proteins, vitamins; low in fats, cholesterols, sodium) and medicinal (anti-oxidative, anti-hypertensive, neuritogenesis) properties of edible mushrooms, all of which are highly beneficial for the maintenance of human health and well-being. This review thus compiles and documents the available literatures on edible mushrooms reported from Malaysia complete with scientific, English, and vernacular names for future references; provides a comprehensive and updated overview on the nutritional and medicinal properties edible mushrooms reported from Malaysia; and identifies the research gaps to promote further research and development on edible mushrooms reported from Malaysia. Overall, Malaysia is and remains a natural repository for wild and cultivated edible mushrooms. Deeper investigation on their nutritional and medicinal properties will certainly serve as an impetus for economic as well as scientific progress.

Matched MeSH terms: Sodium
Fulltext High-quality RNA isolation from pigment-rich Dendrobium flowers

Khairul-Anuar MA, Mazumdar P, Lau SE, Tan TT, Harikrishna JA

3 Biotech, 2019 Oct;9(10):371.
PMID: 31588395 DOI: 10.1007/s13205-019-1898-y

Isolation of high-quality RNA from Dendrobium flowers is challenging because of the high levels of pigment, polysaccharides, and polyphenols. In the present study, an efficient CTAB method for RNA extraction from the pigment-rich flowers of Dendrobium was optimised. The optimised method yielded high quantities of RNA (10.1-12.9 µg/g). Spectrophotometric values of A260/280 in the range of 2.2 to 2.4 and A260/230 values of 2.0 suggested that the isolated RNA was free of polyphenols, polysaccharides, and protein contaminants. RNA integrity numbers determined by microfluidics were in the range of 7.9-8.9 indicative of intact RNA. In the improved method, the addition of 3 M NaCl and 3% PVP-10 in the extraction buffer, followed by an incubation period of 45 min at 65 °C, eliminated most of the polysaccharides, polyphenolic compounds, and denatured protein. Extraction with phenol:chloroform:isoamyl alcohol (125:24:1) effectively removed pigments from the aqueous phase, while the precipitation of RNA with lithium chloride minimised the co-precipitation of protein, DNA, and polysaccharide and resulted in the extraction of high quality of RNA. The suitability of the RNA for downstream processing was confirmed via RT-PCR amplification of Chalcone synthase gene from cDNA prepared from RNA isolated from different developmental stages of the flower of a Dendrobium hybrid. The present method will be highly useful for the isolation of RNA from pigment, polyphenol, and polysaccharide-rich plant tissues.

Matched MeSH terms: Sodium Chloride

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