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  1. Effect of intestinal helminthiasis on intestinal permeability of early primary schoolchildren
    Raj SM, Sein KT, Anuar AK, Mustaffa BE
    Trans R Soc Trop Med Hyg, 1996 11 1;90(6):666-9.
    PMID: 9015510
    Intestinal permeability of 246 early primary schoolchildren at 2 schools (106 of whom were infected with intestinal helminths) was assessed by using the lactulose/mannitol differential absorption test. The ratio of the urinary recoveries of lactulose and mannitol was determined after oral administration of a standard solution of the 2 sugars. Assessment of intestinal permeability was repeated on 100 infected children after treatment and on a cohort of 68 uninfected children. Infected and uninfected groups were compared with respect to baseline lactulose/mannitol ratio (L/M1) and change in lactulose/mannitol ratio between assessments (delta L/M). The correlations between baseline intensity of infection and L/M1, and between fall in intensity and delta L/M, were evaluated. Based on a crude index of socioeconomic status, each child was assigned to one of 3 socioeconomic groups; all but 3 children belonged to either groups 2 or 3. Trichuris trichiura and Ascaris lumbricoides were the 2 predominant infections; the hookworm infection rate was relatively low. The results suggested that helminthiasis exerted only a marginal effect on intestinal permeability, the impact of which in children from lower socioeconomic backgrounds was negligible in comparison with the cumulative effects of other factors.
    Matched MeSH terms: Ascariasis/metabolism; Helminthiasis/metabolism*; Hookworm Infections/metabolism; Intestinal Mucosa/metabolism*; Lactulose/metabolism; Mannitol/metabolism; Trichuriasis/metabolism
  2. Effect of reductive alkylation of Candida rugosa lipase on its enantioselective esterification reaction
    Basri M, Th'ng BL, Razak CN, Salleh AB
    Ann N Y Acad Sci, 1998 Dec 13;864:192-7.
    PMID: 9928091
    Matched MeSH terms: Lipase/metabolism*
  3. Fulltext Iron stores in pregnancy
    George E, Adeeb N, Ahmad J
    Med J Malaysia, 1980 Dec;35(2):129-30.
    PMID: 7266404
    Serum ferritin concentration has been measured in pregnant women at their first antenatal visit. Results were analysed according to trimesters. With progression of the pregnancy there is a fall in serum ferritin concentrations. Haemoglobin and red cell indices cannot be used to predict iron status supplemental iron therapy raised the serum ferritin levels.
    Matched MeSH terms: Iron/metabolism*
  4. Fulltext TRPC3-Nox2 axis mediates nutritional deficiency-induced cardiomyocyte atrophy
    Sudi SB, Tanaka T, Oda S, Nishiyama K, Nishimura A, Sunggip C, et al.
    Sci Rep, 2019 07 05;9(1):9785.
    PMID: 31278358 DOI: 10.1038/s41598-019-46252-2
    Myocardial atrophy, characterized by the decreases in size and contractility of cardiomyocytes, is caused by severe malnutrition and/or mechanical unloading. Extracellular adenosine 5'-triphosphate (ATP), known as a danger signal, is recognized to negatively regulate cell volume. However, it is obscure whether extracellular ATP contributes to cardiomyocyte atrophy. Here, we report that ATP induces atrophy of neonatal rat cardiomyocytes (NRCMs) without cell death through P2Y2 receptors. ATP led to overproduction of reactive oxygen species (ROS) through increased amount of NADPH oxidase (Nox) 2 proteins, due to increased physical interaction between Nox2 and canonical transient receptor potential 3 (TRPC3). This ATP-mediated formation of TRPC3-Nox2 complex was also pathophysiologically involved in nutritional deficiency-induced NRCM atrophy. Strikingly, knockdown of either TRPC3 or Nox2 suppressed nutritional deficiency-induced ATP release, as well as ROS production and NRCM atrophy. Taken together, we propose that TRPC3-Nox2 axis, activated by extracellular ATP, is the key component that mediates nutritional deficiency-induced cardiomyocyte atrophy.
    Matched MeSH terms: Adenosine Triphosphate/metabolism; Heart Failure/metabolism; Reactive Oxygen Species/metabolism; NADPH Oxidase/metabolism; Myocytes, Cardiac/metabolism*; Malnutrition/metabolism*; TRPC Cation Channels/metabolism*
  5. Isothiocyanates and Xenobiotic Detoxification
    Abdull Razis AF, Konsue N, Ioannides C
    Mol Nutr Food Res, 2018 09;62(18):e1700916.
    PMID: 29288567 DOI: 10.1002/mnfr.201700916
    The potential of isothiocyanates to antagonize the carcinogenicity of structurally diverse chemicals has been established in animals. A feasible mechanism of action involves protecting DNA by reducing the availability of the genotoxic metabolites of chemical carcinogens by either inhibiting their generation and/or stimulating their detoxification. In vivo as well as in vitro studies conducted in rat/human primary hepatocytes and precision-cut tissue slices have revealed that isothiocyanates can impair cytochrome P450 activity, including the CYP1 family which is the most active in the bioactivation of carcinogens, by virtue of being mechanism-based inactivators. The aromatic phenethyl isothiocyanate is the most effective of those studied, whereas aliphatic isothiocyanates such as sulforaphane and erucin necessitate high doses in order to manifest such effects that may not always be achievable through the diet. In all systems studied, isothiocyanates are strong inducers of detoxification enzyme systems including quinone reductase, glutathione S-transferase, epoxide hydrolase, and UDP-glucuronosyl transferase. Indeed, in smokers phenethyl isothiocyanate intake increases the urinary excretion of inactive mercapturate metabolites of toxic chemicals present in tobacco. Glucosinolates, the precursors of isothiocyanates, have also the potential to upregulate detoxification enzyme systems, but their contribution to the cancer chemoprevention linked to cruciferous vegetable consumption remains to be evaluated.
    Matched MeSH terms: Carcinogens/metabolism; Epoxide Hydrolases/metabolism; Glucosinolates/metabolism; Glutathione Transferase/metabolism; Glucuronosyltransferase/metabolism; Xenobiotics/metabolism*; Isothiocyanates/metabolism*
  6. P-TEFb goes viral
    Zaborowska J, Isa NF, Murphy S
    Bioessays, 2016 07;38 Suppl 1:S75-85.
    PMID: 27417125 DOI: 10.1002/bies.201670912
    Positive transcription elongation factor b (P-TEFb), which comprises cyclin-dependent kinase 9 (CDK9) kinase and cyclin T subunits, is an essential kinase complex in human cells. Phosphorylation of the negative elongation factors by P-TEFb is required for productive elongation of transcription of protein-coding genes by RNA polymerase II (pol II). In addition, P-TEFb-mediated phosphorylation of the carboxyl-terminal domain (CTD) of the largest subunit of pol II mediates the recruitment of transcription and RNA processing factors during the transcription cycle. CDK9 also phosphorylates p53, a tumor suppressor that plays a central role in cellular responses to a range of stress factors. Many viral factors affect transcription by recruiting or modulating the activity of CDK9. In this review, we will focus on how the function of CDK9 is regulated by viral gene products. The central role of CDK9 in viral life cycles suggests that drugs targeting the interaction between viral products and P-TEFb could be effective anti-viral agents.
    Matched MeSH terms: RNA Polymerase II/metabolism; Transcription Factors/metabolism; Viral Proteins/metabolism*; Viruses/metabolism; Tumor Suppressor Protein p53/metabolism; Cyclin-Dependent Kinase 9/metabolism*; Positive Transcriptional Elongation Factor B/metabolism*
  7. Radical scavenging activity of lipophilized products from transesterification of flaxseed oil with cinnamic acid or ferulic acid
    Choo WS, Birch EJ, Stewart I
    Lipids, 2009 Sep;44(9):807-15.
    PMID: 19727883 DOI: 10.1007/s11745-009-3334-2
    Lipase-catalyzed transesterification of flaxseed oil with cinnamic acid (CA) or ferulic acid (FA) using an immobilized lipase from Candida antarctica (E.C. 3.1.1.3) was conducted to evaluate whether the lipophilized products provided enhanced antioxidant activity in the oil. Lipase-catalyzed transesterification of flaxseed oil with CA or FA produced a variety of lipophilized products (identified using ESI-MS-MS) such as monocinnamoyl/feruloyl-diacylglycerol, dicinnamoyl-monoacylglycerol and monocinnamoyl-monoacylglycerol. The free radical scavenging activity of the lipophilized products of lipase-catalyzed transesterification of flaxseed oil with CA or FA toward 2,2-diphenyl-1-picrylhydrazyl radical (DPPH.) were both examined in ethanol and ethyl acetate. The polarity of the solvents proved important in determining the radical scavenging activity of the substrates. Unesterified FA showed the highest free radical scavenging activity among all substrates tested while CA had negligible activity. The esterification of CA or FA with flaxseed oil resulted in significant increase and decrease in the radical scavenging activity compared with the native phenolic acid, respectively. Based on the ratio of a substrate to DPPH. concentration, lipophilized FA was a much more efficient free radical scavenger compared to lipophilized CA and was able to provide enhanced antioxidant activity in the flaxseed oil. Lipophilized cinnamic acid did not provide enhanced radical scavenging activity in the flaxseed oil as the presence of natural hydrophilic antioxidants in the oil had much greater radical scavenging activity.
    Matched MeSH terms: Biphenyl Compounds/metabolism; Cinnamates/metabolism; Coumaric Acids/metabolism; Enzymes, Immobilized/metabolism; Linseed Oil/metabolism*; Lipase/metabolism*; Picrates/metabolism
  8. Afterword: An update on clinical utility and diagnostic value of various andrological techniques
    Durairajanayagam D, Agarwal A, Baskaran S, Vij S
    Andrologia, 2021 Mar;53(2):e13819.
    PMID: 33620116 DOI: 10.1111/and.13819
    Matched MeSH terms: Spermatozoa/metabolism
  9. CIP2A expression in high grade prostatic intraepithelial neoplasia and prostate adenocarcinoma: a tissue mıcroarray study
    Celikden SG, Baspinar S, Ozturk SA, Karaibrahimoglu A
    Malays J Pathol, 2020 Aug;42(2):227-236.
    PMID: 32860375
    INTRODUCTION: CIP2A is an oncoprotein involved in the progression of several human malignancies. It has recently been described as a prognostic marker in many cancers. The present study aimed to investigate the immunohistochemical expression of CIP2A in benign prostatic hyperplasia (BPH), high grade prostatic intraepithelial neoplasia (HGPIN) and prostate cancer (PC), and to analyse the association with the clinicopathological parameters in PC cases to define its role in the development and progression of PC.

    MATERIALS AND METHODS: Immunohistochemical staining for CIP2A was performed on the tissue microarray sections of 105 PC, 27 HGPIN and 27 BPH tissues. The CIP2A expression scores were compared with several clinicopathological parameters.

    RESULTS: CIP2A was expressed in 96,2% of PC, 55,6% of HGPIN and 40,7% of BPH tissues. The expression of CIP2A in PC was significantly higher than in HGPIN (p<0.0001) and BPH (p<0.0001) cases. CIP2A expression score was significantly associated with Gleason score (p=0.032) and lymphovascular invasion (p=0.039). Nevertheless, there was no statistically significant association between the expression of CIP2A and perineural invasion, pT stage, metastasis and recurrence (p>0.05). Multivariate analysis indicated that GS, lymphovascular invasion, distant metastasis were independent prognostic factors for PC patients but, CIP2A expression score was not found to be a prognostic factor. Additionally, there was no significant difference between the survival times of patients according to CIP2A expression (p=0.174).

    CONCLUSIONS: According to our results, the expression of CIP2A protein is increased in PC and its expression may be involved in the development, differentiation, and aggressiveness of PC. However, further studies are needed to confirm our findings and to clarify the role of CIP2A in the development of PC.

    Matched MeSH terms: Adenocarcinoma/metabolism; Autoantigens/metabolism*; Membrane Proteins/metabolism*; Prostate/metabolism; Prostatic Hyperplasia/metabolism; Biomarkers, Tumor/metabolism; Intracellular Signaling Peptides and Proteins/metabolism*
  10. Cancer Cell Metabolites: Updates on Current Tracing Methods
    Maniam S, Maniam S
    Chembiochem, 2020 12 11;21(24):3476-3488.
    PMID: 32639076 DOI: 10.1002/cbic.202000290
    Cancer is the second leading cause of death-1 in 6 deaths globally is due to cancer. Cancer metabolism is a complex and one of the most actively researched area in cancer biology. Metabolic reprogramming in cancer cells entails activities that involve several enzymes and metabolites to convert nutrient into building blocks that alter energy metabolism to fuel rapid cell division. Metabolic dependencies in cancer generate signature metabolites that have key regulatory roles in tumorigenesis. In this minireview, we highlight recent advances in the popular methods ingrained in biochemistry research such as stable and flux isotope analysis, as well as radioisotope labeling, which are valuable in elucidating cancer metabolites. These methods together with analytical tools such as chromatography, nuclear magnetic resonance spectroscopy and mass spectrometry have helped to bring about exploratory work in understanding the role of important as well as obscure metabolites in cancer cells. Information obtained from these analyses significantly contribute in the diagnosis and prognosis of tumors leading to potential therapeutic targets for cancer therapy.
    Matched MeSH terms: Amino Acids/metabolism; Glucose/metabolism; Glycine/metabolism; Neoplasms/metabolism*; Citric Acid/metabolism; Lactic Acid/metabolism; Succinic Acid/metabolism
  11. Fulltext Double-high in palmitic and oleic acids accumulation in a non-model green microalga, Messastrum gracile SE-MC4 under nitrate-repletion and -starvation cultivations
    Wan Afifudeen CL, Loh SH, Aziz A, Takahashi K, Effendy AWM, Cha TS
    Sci Rep, 2021 01 11;11(1):381.
    PMID: 33431982 DOI: 10.1038/s41598-020-79711-2
    Bioprospecting for biodiesel potential in microalgae primarily involves a few model species of microalgae and rarely on non-model microalgae species. Therefore, the present study determined changes in physiology, oil accumulation, fatty acid composition and biodiesel properties of a non-model microalga Messastrum gracile SE-MC4 in response to 12 continuous days of nitrate-starve (NS) and nitrate-replete (NR) conditions respectively. Under NS, the highest oil content (57.9%) was achieved despite reductions in chlorophyll content, biomass productivity and lipid productivity. However, under both NS and NR, palmitic acid and oleic acid remained as dominant fatty acids thus suggesting high potential of M. gracile for biodiesel feedstock consideration. Biodiesel properties analysis returned high values of cetane number (CN 61.9-64.4) and degree of unsaturation (DU 45.3-57.4) in both treatments. The current findings show the possibility of a non-model microalga to inherit superior ability over model species in oil accumulation for biodiesel development.
    Matched MeSH terms: Fatty Acids/metabolism; Starvation/metabolism; Oleic Acid/metabolism*; Palmitic Acid/metabolism*; Lipid Metabolism/drug effects; Microalgae/metabolism
  12. Fulltext Classical and alternative receptors for SARS-CoV-2 therapeutic strategy
    Masre SF, Jufri NF, Ibrahim FW, Abdul Raub SH
    Rev Med Virol, 2021 09;31(5):1-9.
    PMID: 33368788 DOI: 10.1002/rmv.2207
    Understanding the molecules that are essential for severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) entry can provide insights into viral infection and dissemination. Recently, it has been identified from several studies that angiotensin-converting enzyme 2 receptor and transmembrane serine protease 2 are the main entry molecules for the SARS-CoV-2, which produced the pandemic of Covid-19. However, additional evidence showed several other viral receptors and cellular proteases that are also important in facilitating viral entry and transmission in the target cells. In this review, we summarized the types of SARS-CoV-2 entry molecules and discussed their crucial roles for virus binding, protein priming and fusion to the cellular membrane important for SARS-CoV-2 infection.
    Matched MeSH terms: Receptors, Virus/metabolism*
  13. Extraction of bioactives from Orthosiphon stamineus using microwave and ultrasound-assisted techniques: Process optimization and scale up
    Chan CH, See TY, Yusoff R, Ngoh GC, Kow KW
    Food Chem, 2017 Apr 15;221:1382-1387.
    PMID: 27979103 DOI: 10.1016/j.foodchem.2016.11.016
    This work demonstrated the optimization and scale up of microwave-assisted extraction (MAE) and ultrasonic-assisted extraction (UAE) of bioactive compounds from Orthosiphon stamineus using energy-based parameters such as absorbed power density and absorbed energy density (APD-AED) and response surface methodology (RSM). The intensive optimum conditions of MAE obtained at 80% EtOH, 50mL/g, APD of 0.35W/mL, AED of 250J/mL can be used to determine the optimum conditions of the scale-dependent parameters i.e. microwave power and treatment time at various extraction scales (100-300mL solvent loading). The yields of the up scaled conditions were consistent with less than 8% discrepancy and they were about 91-98% of the Soxhlet extraction yield. By adapting APD-AED method in the case of UAE, the intensive optimum conditions of the extraction, i.e. 70% EtOH, 30mL/g, APD of 0.22W/mL, AED of 450J/mL are able to achieve similar scale up results.
    Matched MeSH terms: Orthosiphon/metabolism*
  14. Chemotactic responses of leucocytes to schistosome egg
    Sornmani S
    Med J Malaya, 1968 Mar;22(3):232.
    PMID: 4234368
    Matched MeSH terms: Schistosomiasis/metabolism
  15. Energy requirements of the population in Singapore
    MILLIS J
    Med J Malaya, 1956 Dec;11(2):119-25.
    PMID: 13417935
    Matched MeSH terms: Energy Metabolism*
  16. The oxygen consumption of Plasmodium berghei in the presence of normal rat serum, immune rat serum and chloroquine sulfate
    Desowitz RS
    Med J Malaya, 1965 Sep;20(1):52-3.
    PMID: 4221414
    Matched MeSH terms: Plasmodium/metabolism*
  17. Mode of action of Saccharomyces cerevisiae in enteric methane mitigation in pigs
    Gong YL, Liang JB, Jahromi MF, Wu YB, Wright AG, Liao XD
    Animal, 2018 Feb;12(2):239-245.
    PMID: 28735588 DOI: 10.1017/S1751731117001732
    The objectives of this study were to determine the effect and mode of action of Saccharomyces cerevisiae (YST2) on enteric methane (CH4) mitigation in pigs. A total of 12 Duroc×Landrace×Yorkshire male finisher pigs (60±1 kg), housed individually in open-circuit respiration chambers, were randomly assigned to two dietary groups: a basal diet (control); and a basal diet supplemented with 3 g/YST2 (1.8×1010 live cells/g) per kg diet. At the end of 32-day experiment, pigs were sacrificed and redox potential (Eh), pH, volatile fatty acid concentration, densities of methanogens and acetogens, and expression of methyl coenzyme-M reductase subunit A gene were determined in digesta contents from the cecum, colon and rectum. Results showed that S. cerevisiae YST2 decreased (P<0.05) the average daily enteric CH4 production by 25.3%, lowered the pH value from 6.99 to 6.69 in the rectum, and increased the Eh value in cecum and colon by up to -55 mV (P<0.05). Fermentation patterns were also altered by supplementation of YST2 as reflected by the lower acetate, and higher propionate molar proportion in the cecum and colon (P<0.05), resulting in lower acetate : propionate ratio (P<0.05). Moreover, there was a 61% decrease in Methanobrevibacter species in the upper colon (P<0.05) and a 19% increase in the acetogen community in the cecum (P<0.05) of treated pigs. Results of our study concluded that supplementation of S. cerevisiae YST2 at 3 g/kg substantially decreased enteric CH4 production in pigs.
    Matched MeSH terms: Cecum/metabolism; Colon/metabolism; Fatty Acids, Volatile/metabolism; Methane/metabolism*; Propionates/metabolism; Rumen/metabolism; Swine/metabolism
  18. Evaluation of recycled paper mill effluent digestion in a modified anaerobic hybrid baffled (MAHB) reactor: reactor performance & kinetic studies
    Hassan SR, Zaman NQ, Dahlan I
    Prep Biochem Biotechnol, 2020;50(3):234-239.
    PMID: 31762367 DOI: 10.1080/10826068.2019.1692214
    Recycled paper mill effluent (RPME) consists of various organic and inorganic compounds. In this study, modified anaerobic hybrid baffled (MAHB) bioreactor has been successfully used to anaerobically digest RPME. The anaerobic digestion was investigated in relation to methane production rate, lignin removal, and chemical oxygen demand (COD) removal, with respect to organic loading rate (OLR) and hydraulic retention time (HRT). The analysis using kinetic study was carried out under mesophilic conditions (37 ± 2 °C) and influent COD concentrations (1000-4000 mg L-1), to prove its practicability towards RPME treatment. First-order kinetic model was used to clarify the behavior of RPME anaerobic digestion under different OLRs (0.14-4.00 g COD L-1 d-1) and HRT (1-7 d). The result shows that the highest COD removal efficiency and methane production rate were recorded to be 98.07% and 2.2223 L CH4 d-1, respectively. This result was further validated by evaluating the biokinetic coefficients (reaction rate constant (k) and maximum biogas production (ym)), which gave values of k = 0.57 d-1 and ym = 0.331 L d-1. This kinetic data concludes that MAHB presented satisfactory performance towards COD removal with relatively high methane production, which can be further utilized as on-site energy supply.
    Matched MeSH terms: Methane/metabolism*
  19. Surface reaction-diffusion kinetics on lattice at the microscopic scale
    Chew WX, Kaizu K, Watabe M, Muniandy SV, Takahashi K, Arjunan SNV
    Phys Rev E, 2019 Apr;99(4-1):042411.
    PMID: 31108654 DOI: 10.1103/PhysRevE.99.042411
    Microscopic models of reaction-diffusion processes on the cell membrane can link local spatiotemporal effects to macroscopic self-organized patterns often observed on the membrane. Simulation schemes based on the microscopic lattice method (MLM) can model these processes at the microscopic scale by tracking individual molecules, represented as hard spheres, on fine lattice voxels. Although MLM is simple to implement and is generally less computationally demanding than off-lattice approaches, its accuracy and consistency in modeling surface reactions have not been fully verified. Using the Spatiocyte scheme, we study the accuracy of MLM in diffusion-influenced surface reactions. We derive the lattice-based bimolecular association rates for two-dimensional (2D) surface-surface reaction and one-dimensional (1D) volume-surface adsorption according to the Smoluchowski-Collins-Kimball model and random walk theory. We match the time-dependent rates on lattice with off-lattice counterparts to obtain the correct expressions for MLM parameters in terms of physical constants. The expressions indicate that the voxel size needs to be at least 0.6% larger than the molecule to accurately simulate surface reactions on triangular lattice. On square lattice, the minimum voxel size should be even larger, at 5%. We also demonstrate the ability of MLM-based schemes such as Spatiocyte to simulate a reaction-diffusion model that involves all dimensions: three-dimensional (3D) diffusion in the cytoplasm, 2D diffusion on the cell membrane, and 1D cytoplasm-membrane adsorption. With the model, we examine the contribution of the 2D reaction pathway to the overall reaction rate at different reactant diffusivity, reactivity, and concentrations.
    Matched MeSH terms: Cell Membrane/metabolism*
  20. Special issue on algae bioprocess engineering
    Show PL, Chew KW, Chang JS
    Bioengineered, 2020 12;11(1):188.
    PMID: 32077364 DOI: 10.1080/21655979.2020.1729546
    Matched MeSH terms: Microalgae/metabolism*
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