Browse publications by year: 2017

  1. Ghadim HB, Hin LS
    Water Environ Res, 2017 Sep 01;89(9):862-870.
    PMID: 28855022 DOI: 10.2175/106143017X14902968254764
      The Bio-Ecological Drainage System (BIOECODS) is a sustainable drainage (SUDS) to demonstrate the 'control at source' approaches for urban stormwater management in Malaysia. It is an environmentally friendly drainage system that was designed to increase infiltration, reduce peak flow at outlet, improve water quality, through different BMPs, such as grass swale, retention pond, etc. A special feature of BIOECODS is ecological swale with on-line subsurface detention. This study attempted to create a model of ecological swale with on-line subsurface conveyance system with InfoWorks SD. The new technique has been used Storm Water Management Model (SWMM) model to describe overland flow routing and Soil Conservation Service Method (SCS) used to model infiltration or subsurface flow. The modeling technique has been proven successful, as the predicted and observed closely match each other, with a mean error of 4.58 to 7.32%. The calibrated model then used to determine the ratio of the flow exchange between the surface and subsurface drainage system. Results from the model showed that the runoff ratio exchange between the surface and subsurface is 60 to 90%.
    MeSH terms: Computer Simulation; Models, Theoretical; Rain*; Sanitary Engineering*; Waste Disposal, Fluid*; Water Movements*; Ecosystem*
  2. Sadeghi M, Popov V, Guzman H, Phan TG, Vasilakis N, Tesh R, et al.
    Virus Res, 2017 10 15;242:49-57.
    PMID: 28855097 DOI: 10.1016/j.virusres.2017.08.012
    Eleven viral isolates derived mostly in albopictus C6/36 cells from mosquito pools collected in Southeast Asia and the Americas between 1966 and 2014 contained particles with electron microscopy morphology typical of reoviruses. Metagenomics analysis yielded the near complete genomes of three novel reoviruses, Big Cypress orbivirus, Ninarumi virus, and High Island virus and a new tetravirus, Sarawak virus. Strains of previously characterized Sathuvarachi, Yunnan, Banna and Parry's Lagoon viruses (Reoviridae), Bontang virus (Mesoniviridae), and Culex theileri flavivirus (Flaviviridae) were also characterized. The availability of these mosquito virus genomes will facilitate their detection by metagenomics or PCR to better determine their geographic range, extent of host tropism, and possible association with arthropod or vertebrate disease.
    MeSH terms: Animals; Asia, Southeastern; Culicidae/virology*; Reoviridae/classification; Reoviridae/genetics*; Reoviridae/isolation & purification*; Genome, Viral; Sequence Analysis, DNA; Flaviviridae/classification; Flaviviridae/genetics*; Flaviviridae/isolation & purification*; Nidovirales/classification; Nidovirales/genetics*; Nidovirales/isolation & purification*
  3. Siddiqui MF, Reza AW, Shafique A, Omer H, Kanesan J
    Magn Reson Imaging, 2017 12;44:82-91.
    PMID: 28855113 DOI: 10.1016/j.mri.2017.08.005
    Sensitivity Encoding (SENSE) is a widely used technique in Parallel Magnetic Resonance Imaging (MRI) to reduce scan time. Reconfigurable hardware based architecture for SENSE can potentially provide image reconstruction with much less computation time. Application specific hardware platform for SENSE may dramatically increase the power efficiency of the system and can decrease the execution time to obtain MR images. A new implementation of SENSE on Field Programmable Gate Array (FPGA) is presented in this study, which provides real-time SENSE reconstruction right on the receiver coil data acquisition system with no need to transfer the raw data to the MRI server, thereby minimizing the transmission noise and memory usage. The proposed SENSE architecture can reconstruct MR images using receiver coil sensitivity maps obtained using pre-scan and eigenvector (E-maps) methods. The results show that the proposed system consumes remarkably less computation time for SENSE reconstruction, i.e., 0.164ms @ 200MHz, while maintaining the quality of the reconstructed images with good mean SNR (29+ dB), less RMSE (<5×10-2) and comparable artefact power (<9×10-4) to conventional SENSE reconstruction. A comparison of the center line profiles of the reconstructed and reference images also indicates a good quality of the reconstructed images. Furthermore, the results indicate that the proposed architectural design can prove to be a significant tool for SENSE reconstruction in modern MRI scanners and its low power consumption feature can be remarkable for portable MRI scanners.
    MeSH terms: Algorithms; Humans; Image Interpretation, Computer-Assisted/methods*; Image Processing, Computer-Assisted/methods*; Magnetic Resonance Imaging/methods*; Artifacts; Phantoms, Imaging
  4. Tao J, Chen J, Li J, Mathurin L, Zheng JC, Li Y, et al.
    Proc Natl Acad Sci U S A, 2017 09 12;114(37):9832-9837.
    PMID: 28855335 DOI: 10.1073/pnas.1709163114
    The optimal functionalities of materials often appear at phase transitions involving simultaneous changes in the electronic structure and the symmetry of the underlying lattice. It is experimentally challenging to disentangle which of the two effects--electronic or structural--is the driving force for the phase transition and to use the mechanism to control material properties. Here we report the concurrent pumping and probing of Cu2S nanoplates using an electron beam to directly manipulate the transition between two phases with distinctly different crystal symmetries and charge-carrier concentrations, and show that the transition is the result of charge generation for one phase and charge depletion for the other. We demonstrate that this manipulation is fully reversible and nonthermal in nature. Our observations reveal a phase-transition pathway in materials, where electron-induced changes in the electronic structure can lead to a macroscopic reconstruction of the crystal structure.
    MeSH terms: Electrons; Physical Examination; Phase Transition; Physical Phenomena; Mechanical Phenomena
  5. Siew HH
    Nihon Ishinkin Gakkai Zasshi, 2017;58(3):E107-E113.
    PMID: 28855477 DOI: 10.3314/mmj.17.014
    Feline sporotrichosis has been reported in Malaysia since the 1990's. Since then, studies have revealed that clinical clade D, Sporothrix schenckii sensu stricto, of a single clonal strain is the most common cause of this disease in Malaysia. The prevalence of a single clonal strain from a clinical clade was never before reported in Asia in a specific geographical niche. This raises the possibility of a process of purifying selection and subsequent clonal proliferation. While agricultural practices may serve as the selective pressure, direct causality has yet to be established. Studies into the thermo-tolerability of the Malaysian clonal strain of S. schenckii sensu stricto revealed that a small minority of clinical isolates have the capacity to grow at 37℃, while the majority displayed low susceptibility to commonly used antifungals in clinical practice, such as itraconazole (ITZ) and terbinafine (TRB). Despite unestablished breakpoints, suspected resistance (MIC > 4 mg/mL) towards amphotericin B (AMB) and fluconazole (FLC) was recorded in the isolates. This explains the often lack of clinical response in feline patients treated with recommended doses of antifungals, including ITZ. Coupled with the potential zoonotic transmission to clients and veterinarians, protracted treatment period, and subsequent cost of treatment, prognosis of feline sporotrichosis is often regarded to be poor. The use of a higher dose of ITZ has been reported, and an adoption of this high-dose treatment regime is reported in this manuscript, with complete cure achieved in cases of recalcitrant and/or unresponsive feline sporotrichosis, which would otherwise be euthanized.
    MeSH terms: Amphotericin B/pharmacology; Animals; Antifungal Agents/administration & dosage; Antifungal Agents/pharmacology; Cat Diseases/microbiology; Cat Diseases/epidemiology*; Cat Diseases/transmission; Cats; Humans; Malaysia/epidemiology; Naphthalenes/pharmacology; Sporotrichosis/microbiology; Sporotrichosis/epidemiology*; Sporotrichosis/transmission; Sporotrichosis/veterinary*; Sporothrix/drug effects; Sporothrix/isolation & purification; Zoonoses; Fluconazole/pharmacology; Prevalence; Itraconazole/administration & dosage; Itraconazole/pharmacology; Drug Resistance, Fungal
  6. Ayodele OB
    Sci Rep, 2017 Aug 30;7(1):10008.
    PMID: 28855545 DOI: 10.1038/s41598-017-09706-z
    Achieving high degree of active metal dispersions at the highest possible metal loading and high reducibility of the metal remains a challenge in Fischer Tropsch synthesis (FTS) as well as in hydrogeoxygenation (HDO).This study therefore reports the influence of oxalic acid (OxA) functionalization on the metal dispersion, reducibility and activity of Co supported ZSM-5 catalyst in FTS and HDO of oleic acid into paraffin biofuel. The Brunauer-Emmett-Teller (BET) results showed that cobalt oxalate supported ZSM-5 catalyst (CoOx/ZSM-5) synthesized from the incorporation of freshly prepared cobalt oxalate complex into ZSM-5 displayed increase in surface area, pore volume and average pore size while the nonfunctionalized cobalt supported on ZSM-5 (Co/ZSM-5) catalyst showed reduction in those properties. Furthermore, both XRD and XPS confirmed the presence of Co° formed from the decomposition of CoOx during calcination of CoOx/ZSM-5 under inert atmosphere. The HRTEM showed that Co species average particle sizes were smaller in CoOx/ZSM-5 than in Co/ZSM-5, and in addition, CoOx/ZSM-5 shows a clear higher degree of active metal dispersion. The FTS result showed that at CO conversion over Co/ZSM-5 and CoOx/ZSM-5 catalysts were 74.28% and 94.23% and their selectivity to C5+ HC production were 63.15% and 75.4%, respectively at 4 h TOS. The HDO result also showed that the CoOx/ZSM-5 has higher OA conversion of 92% compared to 59% over Co/ZSM-5. In addition CoOx/ZSM-5 showed higher HDO and isomerization activities compared to Co/ZSM-5.
    MeSH terms: Atmosphere; Catalysis; Cobalt; Isomerism; Metals; Paraffin; Particle Size; Oleic Acid; Oxalic Acid; Biofuels
  7. Singbal K, Jain D, Raja K, Hoe TM
    J Conserv Dent, 2017 Mar-Apr;20(2):64-67.
    PMID: 28855748 DOI: 10.4103/0972-0707.212236
    BACKGROUND: Apical extrusion of debris during instrumentation is detrimental to the patient.
    AIM: The aim of this study was to evaluate the apical extrusion of debris during root canal instrumentation using two single file rotary Ni-Ti systems.
    MATERIALS AND METHODS: Thirty freshly extracted mandibular premolars with straight roots were sterilized and divided into two groups instrumented using: One Shape rotary Ni-Ti system with Endoflare orifice shaper (Group 1) and Neo-Niti rotary Ni-Ti system with C1 orifice shaper (Group 2). Preweighed Eppendorf tubes fitted for each tooth before instrumentation. During instrumentation, 1 mL of distilled water with a 30-gauge needle was used to irrigate after every instrument. Tips of the tooth were irrigated with 2 ml distilled water after removal from Eppendorf tubes. The total volume of irrigant in each group was the same 8 ml. All tubes were incubated at 68°C for 15 days and subsequently weighed. The difference between pre- and post-debris weights was calculated, and statistical analysis was performed using independent t-test and level of significance was set at 0.05.
    RESULTS: The difference between pre- and post-weights was significantly greater for the One Shape system.
    CONCLUSIONS: The Neolix Niti single file was associated with less extrusion compared to One Shape single file system.
  8. Rath A, Ramamurthy PH, Fernandes BA, Sidhu P
    J Conserv Dent, 2017 9 1;20(2):134-136.
    PMID: 28855763 DOI: 10.4103/0972-0707.212237
    Tooth surface loss (TSL) is a complex phenomenon characterized by the loss of hard tooth structure at various locations of the teeth, usually due to more than one factor. TSL due to abrasion can be significant in patients consuming coarse, abrasive diet. The present case reports an interesting incisal edge abrasion in a female patient, attributed to a particular dietary behavior of long-term consumption of sunflower seeds. All her family members and most of the people from her native place were also reported to have similar lesions by the patient. Larger epidemiological studies to assess the prevalence and severity of such abrasive lesions in geographic areas with this particular dietary habit need to be carried out so that people may be made aware and educated about alternative ways of eating sunflower seeds that will not cause any form of tooth wear.
    MeSH terms: Diet; Eating; Feeding Behavior; Female; Helianthus; Humans; Prevalence; Epidemiologic Studies; Tooth Attrition; Tooth Wear
  9. Kuppusamy P, Govindan N, Yusoff MM, Ichwan SJA
    Saudi J Biol Sci, 2017 Sep;24(6):1212-1221.
    PMID: 28855814 DOI: 10.1016/j.sjbs.2014.09.017
    Colon cancer is the most common type of cancer and major cause of death worldwide. The detection of colon cancer is difficult in early stages. However, the secretory proteins have been used as ideal biomarker for the detection of colon cancer progress in cancer patients. Serum/tissue protein expression could help general practitioners to identify colon cancer at earlier stages. By this way, we use the biomarkers to evaluate the anticancer drugs and their response to therapy in cancer models. Recently, the biomarker discovery is important in cancer biology and disease management. Also, many measurable specific molecular components have been studied in colon cancer therapeutics. The biomolecules are mainly DNA, RNA, metabolites, enzymes, mRNA, aptamers and proteins. Thus, in this review we demonstrate the important protein biomarker in colon cancer development and molecular identification of protein biomarker discovery.
    MeSH terms: Antineoplastic Agents; Blood Proteins; Cause of Death; Colonic Neoplasms; DNA; Humans; RNA; RNA, Messenger; Biomarkers; Disease Management; General Practitioners
  10. Haruna E, Zin NM, Adams JM
    Genom Data, 2017 Dec;14:44-46.
    PMID: 28856101 DOI: 10.1016/j.gdata.2017.08.005
    Here we report the draft genome sequence of an endophytic Paenibacillus tyrfis strain isolated from the Universiti Kebangsaan Malaysia reserve forest, Malaysia. The genome size was approximately 8.04 Mb, and the assembly consisted of 107 scaffolds with 168 contigs, and had a G + C content of 53%. Phylogenetic analysis of strain SUK123 using the 16S rRNA gene revealed that it belonged to the family Paenibacillaceae with the highest similarity to Paenibacillus elgii SD(T) (99%). Whole genome comparison of SUK123 with related species using average nucleotide identity (ANI) analysis revealed a similarity of 98% to Paenibacillus tyrfis Mst1(T), 94% to Paenibacillus elgii B69(T), 91% to Paenibacillus ehimensis A2(T), 68% to Paenibacillus polymyxa SC2(T) and 69% to Paenibacillus alvei DMS29(T). The draft genome was deposited at the European Nucleotide Archive (PRJEB21373).
  11. Chang YHR, Yoon TL, Lim TL, Tuh MH, Goh ES
    Phys Chem Chem Phys, 2017 Sep 20;19(36):24613-24625.
    PMID: 28856366 DOI: 10.1039/c7cp03749j
    Theoretical investigations of the thermoelectric and piezoelectric characteristics in the AlxIn1-xN system have been carried out based on a first principles approach in combination with the semi-classical Boltzmann transport concept and density functional perturbation theory. Based on our previous work, herein, the study specimens Al5InN6, Al6In2N8, Al4In2N6, Al3In3N6, Al2In4N6, and AlIn7N8 have been predicted to be stable phases. These novel phases intrinsically exhibit moderate positive Seebeck curves (199.1-284.6 μV K-1) and a ZT close to unity that varies marginally over a broad temperature range of 200-800 K, demonstrating the sign of good bipolar effect tolerance. Addition of heftier elements, such as In, results in lower thermal conductivity, which in turn generates a high power factor (0.019-0.345 W m-1 K-2) in these alloys. While hole doping enhances the peak Seebeck coefficient of each phase, the electrical conductivity has been greatly compromised, resulting in a lower power factor. These composites also exhibit large piezoelectric constants, in which their respective largest piezoelectric tensor is several orders higher than that of quartz. The decomposition process shows that In and N are the main contributors of the internal piezoelectric term. Overall results indicate that AlxIn1-xN show bright prospects in thermoelectric and piezoelectric applications.
  12. Yeap GY, Chan YH, Mahmood WAK
    J Fluoresc, 2017 Nov;27(6):2017-2022.
    PMID: 28856483 DOI: 10.1007/s10895-017-2140-0
    A novel, 100% water-soluble chalcone based chemosensing receptor {1-[3-(2-Hydroxy-phenyl)-3-oxo-propenyl]-naphthalen-2-yloxy}-acetic acid, L was synthesized and characterized. The receptor L is designed based on the chelation enhanced fluorescence (CHEF) mechanism. The chemosensing properties of L were evaluated by UV-vis and fluorescence spectrometric methods. It exhibits highly selective recognition ability towards aluminum ions in water over other metal ions. The binding stoichiometry of L- Al3+complex is 2:1 by means of Job's plot and the detection limit is 5.66 × 10- 8M.
  13. Sadiq MB, Ramanoon SZ, Mansor R, Syed-Hussain SS, Shaik Mossadeq WM
    Trop Anim Health Prod, 2017 Dec;49(8):1741-1748.
    PMID: 28856534 DOI: 10.1007/s11250-017-1387-4
    The objectives of this cross-sectional study were to estimate the prevalence of lameness, claw lesions, and associated risk factors in dairy farms in Selangor, Malaysia. The sample population was 251 lactating cows from 8 farms assessed for lameness and claw lesions by locomotion scoring and claw assessment respectively while specific animal-based measures were hypothesized as cow-level risk factors. The Wilcoxon rank test and logistic regression were applied to assess the prevalence of lameness, claw lesions, and association with potential risk factors, respectively. The prevalence of lameness was 19.1% ranging from 10.0 to 33.3% while 31.1% of cows had claw lesions and ranged from 16.3-40%. Claw lesions were recorded in 87.5% of the lame cows with highest being those affected with sole lesions (54.2%) and white line disease (61.2%). Overall, the occurrence of overgrown claws, sole lesions, white line disease, and digital dermatitis were 37, 18.2, 10.9, and 8.3%, respectively. More than one claw lesion per cow was present in 71.8% of the affected cows. Lameness was associated with early lactation (OR = 3.3; 95% CI 2-7), injured hocks (OR = 4.8; 95% CI 5-17), and dirty legs hygiene (OR = 2.6; 95% CI 1.3-6.2), whereas presence of claw lesions was associated with dirty legs hygiene (OR = 4.7; 95% CI 4-11) and overgrown claw (OR = 2.7; 95% CI 1.4-5.3). To reduce the prevalence of lameness, farmers need to improve the management of cows with overgrown claw, injured hocks, and cleanliness by establishing routine claw trimming and efficient stall design.
    MeSH terms: Animals; Animal Husbandry; Cattle; Cattle Diseases/epidemiology*; Cross-Sectional Studies; Female; Foot Diseases/etiology; Foot Diseases/epidemiology; Foot Diseases/veterinary*; Hoof and Claw/pathology*; Lactation; Lameness, Animal/etiology*; Lameness, Animal/epidemiology; Malaysia/epidemiology; Risk Factors; Prevalence; Logistic Models; Digital Dermatitis; Farms
  14. Choudhury A, Jindal A, Maiwall R, Sharma MK, Sharma BC, Pamecha V, et al.
    Hepatol Int, 2017 Sep;11(5):461-471.
    PMID: 28856540 DOI: 10.1007/s12072-017-9816-z
    BACKGROUND AND AIMS: Acute-on-chronic liver failure (ACLF) is a progressive disease associated with rapid clinical worsening and high mortality. Early prediction of mortality and intervention can improve patient outcomes. We aimed to develop a dynamic prognostic model and compare it with the existing models.

    METHODS: A total of 1402 ACLF patients, enrolled in the APASL-ACLF Research Consortium (AARC) with 90-day follow-up, were analyzed. An ACLF score was developed in a derivation cohort (n = 480) and was validated (n = 922).

    RESULTS: The overall survival of ACLF patients at 28 days was 51.7%, with a median of 26.3 days. Five baseline variables, total bilirubin, creatinine, serum lactate, INR and hepatic encephalopathy, were found to be independent predictors of mortality, with AUROC in derivation and validation cohorts being 0.80 and 0.78, respectively. AARC-ACLF score (range 5-15) was found to be superior to MELD and CLIF SOFA scores in predicting mortality with an AUROC of 0.80. The point scores were categorized into grades of liver failure (Gr I: 5-7; II: 8-10; and III: 11-15 points) with 28-day cumulative mortalities of 12.7, 44.5 and 85.9%, respectively. The mortality risk could be dynamically calculated as, with each unit increase in AARC-ACLF score above 10, the risk increased by 20%. A score of ≥11 at baseline or persisting in the first week was often seen among nonsurvivors (p = 0.001).

    CONCLUSIONS: The AARC-ACLF score is easy to use, dynamic and reliable, and superior to the existing prediction models. It can reliably predict the need for interventions, such as liver transplant, within the first week.

    MeSH terms: Humans; Prognosis; Sensitivity and Specificity; Survival Analysis; Organ Dysfunction Scores*; Acute-On-Chronic Liver Failure/mortality*
  15. Yu G, Hatta A, Periyannan S, Lagudah E, Wulff BBH
    Methods Mol Biol, 2017;1659:207-213.
    PMID: 28856653 DOI: 10.1007/978-1-4939-7249-4_18
    DNA is widely used in plant genetic and molecular biology studies. In this chapter, we describe how to extract DNA from wheat tissues. The tissue samples are ground to disrupt the cell wall. Then cetyltrimethylammonium bromide (CTAB) or sodium dodecyl sulfate (SDS) is used to disrupt the cell and nuclear membranes to release the DNA into solution. A reducing agent, β-mercaptoethanol, is added to break the disulfide bonds between the cysteine residues and to help remove the tanins and polyphenols. A high concentration of salt is employed to remove polysaccharides. Ethylenediaminetetraacetic acid (EDTA) stops DNase activity by chelating the magnesium ions. The nucleic acid solution is extracted with chloroform-isoamyl alcohol (24:1) or 6 M ammonium acetate. The DNA in aqueous phase is precipated with ethanol or isopropanol, which makes DNA less hydrophilic in the presence of sodium ions (Na+).
    MeSH terms: Acetates/chemistry; Cetrimonium Compounds/chemistry; Chromosome Mapping/methods; Cloning, Molecular/methods; Edetic Acid/chemistry; Chemical Fractionation/methods*; Mercaptoethanol/chemistry; Chemical Precipitation; Sodium Dodecyl Sulfate/chemistry; Triticum/genetics*; DNA, Plant/genetics; DNA, Plant/isolation & purification*; Reducing Agents/chemistry; Genomics/methods
  16. Alasmary FAS, Alnahdi FS, Ben Bacha A, El-Araby AM, Moubayed N, Alafeefy AM, et al.
    J Enzyme Inhib Med Chem, 2017 Dec;32(1):1143-1151.
    PMID: 28856929 DOI: 10.1080/14756366.2017.1363743
    Elevated blood glucose and increased activities of secreted phospholipase A2 (sPLA2) are strongly linked to coronary heart disease. In this report, our goal was to develop small heterocyclic compound that inhibit sPLA2. The title compounds were also tested against α-glucosidase and α-amylase. This array of enzymes was selected due to their implication in blood glucose regulation and diabetic cardiovascular complications. Therefore, two distinct series of quinoxalinone derivatives were synthesised; 3-[N'-(substituted-benzylidene)-hydrazino]-1H-quinoxalin-2-ones 3a-f and 1-(substituted-phenyl)-5H-[1,2,4]triazolo[4,3-a]quinoxalin-4-ones 4a-f. Four compounds showed promising enzyme inhibitory effect, compounds 3f and 4b-d potently inhibited the catalytic activities of all of the studied proinflammatory sPLA2. Compound 3e inhibited α-glucosidase (IC50 = 9.99 ± 0.18 µM); which is comparable to quercetin (IC50 = 9.93 ± 0.66 µM), a known inhibitor of this enzyme. Unfortunately, all compounds showed weak activity against α-amylase (IC50 > 200 µM). Structure-based molecular modelling tools were utilised to rationalise the SAR compared to co-crystal structures with sPLA2-GX as well as α-glucosidase. This report introduces novel compounds with dual activities on biochemically unrelated enzymes mutually involved in diabetes and its complications.
    MeSH terms: alpha-Glucosidases/metabolism*; Dose-Response Relationship, Drug; Enzyme Inhibitors/chemical synthesis; Enzyme Inhibitors/pharmacology*; Enzyme Inhibitors/chemistry; Humans; Models, Molecular; Quinoxalines/chemical synthesis; Quinoxalines/pharmacology*; Quinoxalines/chemistry; Structure-Activity Relationship; Molecular Structure; Phospholipases A2, Secretory/antagonists & inhibitors*; Phospholipases A2, Secretory/metabolism
  17. Lee HX, Ahmad F, Saad B, Ismail MN
    Prep Biochem Biotechnol, 2017 Nov 26;47(10):998-1007.
    PMID: 28857669 DOI: 10.1080/10826068.2017.1365250
    Date fruits are well known to be very nutritious. Nevertheless, the protein contents of the fruit, particularly the seed and flesh, are still understudied, largely due to their difficult physical characteristics. This study was conducted to compare three different protein extraction methods which were the trichloroacetic acid (TCA)-acetone (TCA-A), phenol (Phe), and TCA-acetone-phenol (TCA-A-Phe), and to perform proteomic analysis on date palm seed and flesh. Phe extraction method showed the highest protein yields for both seed (8.26 mg/g) and flesh (1.57 mg/g). Through sodium dodecyl sulfate-polyacrylamide gel electrophoresis, Phe, and TCA-A-Phe extraction methods were shown to be efficient in removing interfering compounds and gave well-resolved bands over a wide range of molecular weights. Following liquid chromatography-tandem mass spectrometry analysis, about 50-64% of extracted proteins were identified with known functions including those involved in glycolysis, Krebs cycle, defense, and storage. Phe protein extraction method was proven to be the optimal method for date flesh and seed.
    MeSH terms: Acetone/chemistry; Electrophoresis, Polyacrylamide Gel/methods; Fruit/chemistry*; Plant Proteins/analysis*; Plant Proteins/isolation & purification; Seeds/chemistry*; Trichloroacetic Acid/chemistry; Phenol/chemistry; Tandem Mass Spectrometry/methods; Phoeniceae/chemistry*
  18. Nadarajah S, Samsudin A, Ramli N, Tan CT, Mimiwati Z
    Optom Vis Sci, 2017 10;94(10):981-985.
    PMID: 28858045 DOI: 10.1097/OPX.0000000000001117
    SIGNIFICANCE: To our knowledge, this is the first time a study looking at the association between corneal hysteresis (CH) and obstructive sleep apnea syndrome (OSAS) severity has been reported. We provide evidence that CH is lower in OSAS and speculate on the possible causes.

    PURPOSE: The present study aims to look at the association between CH and severity of OSAS, and whether CH could be another link between OSAS and the development of glaucoma.

    METHODS: This was a cross-sectional, observational study at the University Malaya Medical Centre, Kuala Lumpur. Patients undergoing polysomnography for assessment of OSAS were recruited. We measured central corneal thickness (CCT) using optical biometry, and CH using ocular response analysis. Intraocular pressure (IOP) and Humphrey visual field (HVF) indices were also measured. The Apnea Hypopnea Index (AHI) divided patients into normal, mild, moderate, and severe OSAS categories. The normal and mild categories (47.9%) were then collectively called group 1, and the moderate and severe categories (52.1%) were called group 2. T tests, Pearson correlation tests, and general linear model analysis were performed, with P .05). CH correlated negatively with AHI (r = -0.229, P = .013) and positively with lowest oxygen saturation (r = 0.213, P = .022).

    CONCLUSIONS: CH is lower in moderate/severe OSAS than in normal/mild cases. This may be another link between OSAS and the development of glaucoma; further studies are indicated to determine the significance of this connection.

    MeSH terms: Adult; Aged; Biomechanical Phenomena; Cornea/physiopathology*; Corneal Diseases/diagnosis; Corneal Diseases/etiology*; Corneal Diseases/physiopathology; Cross-Sectional Studies; Female; Humans; Intraocular Pressure*; Male; Middle Aged; Tonometry, Ocular; Polysomnography; Sleep Apnea, Obstructive/complications*; Sleep Apnea, Obstructive/diagnosis; Sleep Apnea, Obstructive/physiopathology
  19. Hasan SS, Kow CS, Verma RK, Ahmed SI, Mittal P, Chong DWK
    Medicine (Baltimore), 2017 Sep;96(35):e7929.
    PMID: 28858118 DOI: 10.1097/MD.0000000000007929
    Aging is significantly associated with the development of comorbid chronic conditions. These conditions indicate the use of multiple medications, and are often warranted by clinical guidelines. The aim of the present study was to evaluate medication appropriateness and frailty among Malaysian aged care home residents with chronic disease. The participants were 202 elderly (≥65 years) individuals, a cross-sectional sample from 17 aged care homes. After ethics approval, each participant was interviewed to collect data on sociodemographics, frailty status (Groningen Frailty Indicator [GFI]), medication appropriateness (Medication Appropriateness Index (MAI), the 2015 Beers' criteria (Potentially Inappropriate Medication [PIM]), and 2014 STOPP criteria (Potentially Inappropriate Prescribing [PIP]). The findings show that 81% (n = 164) and 42% (n = 85) were taking medications for cardiovascular and central nervous system-related conditions, respectively, and 34% were using medications for diabetes (n = 69). Each participant had a mean of 2.9 ± 1.5 chronic diseases, with an average GFI score of 6.4 ± 3.6. More than three-quarters of the participants (76%) were frail and polypharmacy was a factor in nearly half (48%); 41% and 36% were prescribed at least one PIP and PIM, respectively, whereas the average MAI score was 0.6 (range: 0-6). The number of medications used per participant correlated significantly and positively (0.21, P = .002) with GFI score. These findings reinforce the need for participants of aged care homes to receive periodic medication review aimed at minimizing morbidity associated with inappropriate pharmacotherapy.
    MeSH terms: Aged; Aged, 80 and over; Chronic Disease/drug therapy*; Cross-Sectional Studies; Female; Homes for the Aged*; Humans; Malaysia; Male; Nursing Homes*; Socioeconomic Factors; Frail Elderly*; Polypharmacy*; Inappropriate Prescribing*
  20. Awais M, Badruddin N, Drieberg M
    Sensors (Basel), 2017 Aug 31;17(9).
    PMID: 28858220 DOI: 10.3390/s17091991
    Driver drowsiness is a major cause of fatal accidents, injury, and property damage, and has become an area of substantial research attention in recent years. The present study proposes a method to detect drowsiness in drivers which integrates features of electrocardiography (ECG) and electroencephalography (EEG) to improve detection performance. The study measures differences between the alert and drowsy states from physiological data collected from 22 healthy subjects in a driving simulator-based study. A monotonous driving environment is used to induce drowsiness in the participants. Various time and frequency domain feature were extracted from EEG including time domain statistical descriptors, complexity measures and power spectral measures. Features extracted from the ECG signal included heart rate (HR) and heart rate variability (HRV), including low frequency (LF), high frequency (HF) and LF/HF ratio. Furthermore, subjective sleepiness scale is also assessed to study its relationship with drowsiness. We used paired t-tests to select only statistically significant features (p < 0.05), that can differentiate between the alert and drowsy states effectively. Significant features of both modalities (EEG and ECG) are then combined to investigate the improvement in performance using support vector machine (SVM) classifier. The other main contribution of this paper is the study on channel reduction and its impact to the performance of detection. The proposed method demonstrated that combining EEG and ECG has improved the system's performance in discriminating between alert and drowsy states, instead of using them alone. Our channel reduction analysis revealed that an acceptable level of accuracy (80%) could be achieved by combining just two electrodes (one EEG and one ECG), indicating the feasibility of a system with improved wearability compared with existing systems involving many electrodes. Overall, our results demonstrate that the proposed method can be a viable solution for a practical driver drowsiness system that is both accurate and comfortable to wear.
    MeSH terms: Automobile Driving; Electrocardiography; Electroencephalography; Humans; Sleep Stages*; Support Vector Machine
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