Displaying publications 1 - 20 of 33 in total

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  1. Fulltext When West Meets East: The Origins and Spread of Weedy Rice Between Continental and Island Southeast Asia
    Neik TX, Chai JY, Tan SY, Sudo MPS, Cui Y, Jayaraj J, et al.
    G3 (Bethesda), 2019 09 04;9(9):2941-2950.
    PMID: 31292156 DOI: 10.1534/g3.119.400021
    Weedy crop relatives are among the world's most problematic agricultural weeds, and their ability to rapidly evolve can be enhanced by gene flow from both domesticated crop varieties and wild crop progenitor species. In this study, we examined the role of modern commercial crop cultivars, traditional landraces, and wild relatives in the recent emergence and proliferation of weedy rice in East Malaysia on the island of Borneo. This region of Malaysia is separated from the Asian continent by the South China Sea, and weedy rice has become a major problem there more recently than on the Malaysian peninsular mainland. Using 24 polymorphic SSR loci and genotype data from the awn-length domestication gene An-1, we assessed the genetic diversity, population structure and potential origins of East Malaysian weeds; 564 weedy, cultivated and wild rice accessions were analyzed from samples collected in East Malaysia, Peninsular Malaysia and neighboring countries. While there is considerable evidence for contributions of Peninsular Malaysian weed ecotypes to East Malaysian populations, we find that local crop cultivars and/or landraces from neighboring countries are also likely contributors to the weedy rice infestations. These findings highlight the implications of genetic admixture from different cultivar source populations in the spread of weedy crop relatives and the urgent need for preventive measurements to maintain sustainable crop yields.
    Matched MeSH terms: Plant Weeds/genetics*
  2. Varietal response of chickpea (Cicer arietinum L.) towards the allelopathy of different weeds
    Rahamdad Khan, Ijaz Ahmad Khan
    Sains Malaysiana, 2015;44:25-30.
    In a laboratory trial three chickpea varieties viz, Karak-I, Karak-III and Shenghar were tested against the phytotoxicity of five weed species: Parthenium hysterophorus L., Phragmites australis (Cav.) Trin., Datura alba L., Cyperus rotundus L. and Convolvulus arvensis L.in January 2013. The weed extracts were prepared at the rate of 120 g/L (w/v) after shade dry. The results indicated highly significant inhibitory effect of all the tested weed species on the chickpea varieties. The results also showed that the chickpea variety Karak-III was more susceptible to the phytotoxcity of the tested weed extracts. Among the extract, C. arvensis proved much toxic in term of inhibition of germination by giving only 43.33% germination in comparison with control where 97.50% germination was recorded. On the other hand, the effect of P. australis extract was found a little stimulator by speeding the seed germination in all varieties and giving a low (2.21) mean germination time (MGT) value. From the current results it can be concluded that the infestation of C. arvensis can pollute the soil by accumulating toxic chemicals that leads to the germination failure and growth suppression in chickpea. Therefore, the prevention and removal of C. arvensis in the chickpea growing areas could be recommended. In addition, P. australis must be tested against chickpea weeds (chickpea varieties withstand against its phytotoxcity), so that it can be popularized as bioherbicide in chickpea if it gave promising results in controlling chickpea weeds.
    Matched MeSH terms: Plant Weeds
  3. The potential use of oil palm frond mulch treated with imazethapyr for weed control in Malaysian coconut plantation
    Masilaman D, Mazira Che Mat, Chuah TS
    Sains Malaysiana, 2017;46:1171-1182.
    ntroduction of new weed management strategy for coconut plantation in Malaysia is essential since the current weed control methods are less effective and highly herbicide dependent, thus leading to development of herbicide resistance in weeds as well as environmental and human health concerns. Thus, the present study aimed to evaluate the phytotoxic effects of oil palm frond mulch treated with imazethapyr at a reduced rate on weed emergence and growth. The results of glasshouse experiments have shown that imazethapyr at 12 g a.i. ha-1 in combination with oil palm residues of leaflet (OPL), rachis (OPR) or frond (OPF) at rates of 1.4-1.8 t ha-1 inhibited Eleusine indica emergence and growth by 90-100%, implying that imazethapyr is compatible with oil palm residue mulches. In the field experiment, hand weeding followed by OPF at 3.4 t ha-1 treated with imazethapyr at 24 g a.i. ha-1 have demonstrated excellent control of Mikania micrantha, Asystasia gangetica, Phyllanthus amarus, Panicum sp. and Echinochloa colona by reducing their total dry weight up to 95% at three months after treatment. The present results suggested that the integration of chemical, physical and mechanical methods can provide effective weed control in the coconut plantation for months.
    Matched MeSH terms: Plant Weeds
  4. The effect of salinity on chlorophyll, proline and mineral nutrients in common weeds of coastal rice fields in Malaysia
    Hakim MA, Juraimi AS, Hanafi MM, Ismail MR, Rafii MY, Aslani F, et al.
    J Environ Biol, 2014 Sep;35(5):855-64.
    PMID: 25204059
    Six weed species (Leptochola chinensis, Echinochloa crus-galli, Echinochloa colona, Jussiaea linifolia, Oryza sativa (weedy rice) and Cyperus iria) were tested for their salt tolerant traits in terms of chlorophyll, proline and mineral nutrients accumulation against different salinity levels (0, 4, 8, 16, 24, 32, and 40 dS m(-1)). Chlorophyll a, b and total chlorophyll content, proline and mineral nutrients accumulation were determined. Salt stress showed prominent effect on all the parameters investigated and there were significant variations between the all weed species. Chlorophyll content, K+, Ca(2+) and Mg(2+) ions in both shoots and roots significantly decreased; while proline and Na+ accumulation significantly increased with increasing salinity up to 40 dS m(-1). In terms of overall performance, Cyperus iria and E. crus-galliwere relatively more tolerant; E. colona and J. linifolia were tolerant; L. chinensis and O. sativa L were salt sensitive, respectively.
    Matched MeSH terms: Plant Weeds/metabolism*
  5. Fulltext Survey of Portulacaceae family flora in Taif, Saudi Arabia
    Majrashi A, Khandaker MM
    Braz J Biol, 2021;84:e249230.
    PMID: 34730697 DOI: 10.1590/1519-6984.249230
    The presence of weeds in areas of agricultural activities is a hinderance to the development of these activities. It is important to take advantage of the vast open spaces suitable for agriculture and provide food security for humans, and also it is an important indicator for determining the feasibility of growing crops, benefiting from yield and determining the percentage of loss, clearing fields through agricultural practices, that protect crops from weed attack and agricultural practice method must be followed that will reduce weed presence. This study was conducted during the years 2018 to 2020 to evaluate Portulacaceae of Flora in the Taif area in the Kingdom of Saudi Arabia at different altitudes (Area 1 =1700 m, Area 2 =1500 m, Area 3 =1500 m, Area 4 =500 m ِ Area 5 = 2200 m, and Area 6 = 2200 m). The results show that there were 2,816 individuals of Portulaca oleracea weed, with the highest density found in A 1, followed by A 2, while in A 5 and A 6, no weeds were recorded. The highest density of weeds were in the Pomegranate fields, followed by Grape fields. The lowest density was found in A man field. The results of this study will help to take the necessary measures to combat weeds and its management in areas of agricultural activity, while more studies are needed to survey the ecology of weeds of Taif in The Kingdom of Saudi Arabia.
    Matched MeSH terms: Plant Weeds
  6. Studies on seed germination and growth in weed species of rice field under salinity stress
    Hakim MA, Juraimi AS, Hanafi MM, Selamat A, Ismail MR, Karim SM
    J Environ Biol, 2011 Sep;32(5):529-36.
    PMID: 22319865
    An investigation was made to see the salt tolerance of 10 weed species of rice. Properly dried and treated seeds of weed species were placed on 9 cm diameter petridishes lined with Whatman No. 1 filter paper under 6 salinity regimes, viz. 0 (control), 4, 8, 16, 24 and 32 dS m(-1). The petri dishes were then kept in germinator at 25 +/- 1.0 degrees C and 12 hr light. The number of germinated seeds were recorded daily. The final germination percentage, germination index (GI), seedling vigour index, mean germination time and time for 50% germination were estimated. Root and shoot lengths of the weed seedlings were measured at 20 days after salt application and relative growth values were calculated. Results revealed that salinity decreased final germination percentage, seed of germination as measured by GI, and shoot and root length in all the species. Germination of most of the weed seeds was completely arrested (0) at 32 dS m(-1) salinity except in E. colona (12%) and C. iria (13.9%). The species C. iria, E. colona, J. linifolia and E. crusgalli showed better germination (above 30%) upto 24 dS m(-1) salinity level and were regarded as salt-tolerant weed species. J. linifolia, F. miliacea, L. chinensis and O. sativa L. (weedy rice) were graded as moderately tolerant and S. zeylanica, S. grosus and C. difformis were regarded as least tolerant weed species.
    Matched MeSH terms: Plant Weeds/classification; Plant Weeds/drug effects*; Plant Weeds/physiology
  7. Fulltext Ser-653-Asn substitution in the acetohydroxyacid synthase gene confers resistance in weedy rice to imidazolinone herbicides in Malaysia
    Ruzmi R, Ahmad-Hamdani MS, Mazlan N
    PLoS One, 2020;15(9):e0227397.
    PMID: 32925921 DOI: 10.1371/journal.pone.0227397
    The continuous and sole dependence on imidazolinone (IMI) herbicides for weedy rice control has led to the evolution of herbicide resistance in weedy rice populations across various countries growing IMI herbicide-resistant rice (IMI-rice), including Malaysia. A comprehensive study was conducted to elucidate occurrence, level, and mechanisms endowing resistance to IMI herbicides in putative resistant (R) weedy rice populations collected from three local Malaysian IMI-rice fields. Seed bioassay and whole-plant dose-response experiments were conducted using commercial IMI herbicides. Based on the resistance index (RI) quantification in both experiments, the cross-resistance pattern of R and susceptible (S) weedy rice populations and control rice varieties (IMI-rice variety MR220CL2 and non-IMI-rice variety MR219) to imazapic and imazapyr was determined. A molecular investigation was carried out by comparing the acetohydroxyacid synthase (AHAS) gene sequences of the R and S populations and the MR220CL2 and MR219 varieties. The AHAS gene sequences of R weedy rice were identical to those of MR220CL2, exhibiting a Ser-653-Asn substitution, which was absent in MR219 and S plants. In vitro assays were conducted using analytical grade IMI herbicides of imazapic (99.3%) and imazapyr (99.6%) at seven different concentrations. The results demonstrated that the AHAS enzyme extracted from the R populations and MR220CL2 was less sensitive to IMI herbicides than that from S and MR219, further supporting that IMI herbicide resistance was conferred by target-site mutation. In conclusion, IMI resistance in the selected populations of Malaysian weedy rice could be attributed to a Ser-653-Asn mutation that reduced the sensitivity of the target site to IMI herbicides. To our knowledge, this study is the first to show the resistance mechanism in weedy rice from Malaysian rice fields.
    Matched MeSH terms: Plant Weeds/drug effects*; Plant Weeds/genetics
  8. Fulltext Rice Crop Counting Using Aerial Imagery and GIS for the Assessment of Soil Health to Increase Crop Yield
    Hassan SI, Alam MM, Zia MYI, Rashid M, Illahi U, Su'ud MM
    Sensors (Basel), 2022 Nov 07;22(21).
    PMID: 36366269 DOI: 10.3390/s22218567
    Rice is one of the vital foods consumed in most countries throughout the world. To estimate the yield, crop counting is used to indicate improper growth, identification of loam land, and control of weeds. It is becoming necessary to grow crops healthy, precisely, and proficiently as the demand increases for food supplies. Traditional counting methods have numerous disadvantages, such as long delay times and high sensitivity, and they are easily disturbed by noise. In this research, the detection and counting of rice plants using an unmanned aerial vehicle (UAV) and aerial images with a geographic information system (GIS) are used. The technique is implemented in the area of forty acres of rice crop in Tando Adam, Sindh, Pakistan. To validate the performance of the proposed system, the obtained results are compared with the standard plant count techniques as well as approved by the agronomist after testing soil and monitoring the rice crop count in each acre of land of rice crops. From the results, it is found that the proposed system is precise and detects rice crops accurately, differentiates from other objects, and estimates the soil health based on plant counting data; however, in the case of clusters, the counting is performed in semi-automated mode.
    Matched MeSH terms: Plant Weeds
  9. Fulltext Porous borders at the wild-crop interface promote weed adaptation in Southeast Asia
    Li LF, Pusadee T, Wedger MJ, Li YL, Li MR, Lau YL, et al.
    Nat Commun, 2024 Feb 21;15(1):1182.
    PMID: 38383554 DOI: 10.1038/s41467-024-45447-0
    High reproductive compatibility between crops and their wild relatives can provide benefits for crop breeding but also poses risks for agricultural weed evolution. Weedy rice is a feral relative of rice that infests paddies and causes severe crop losses worldwide. In regions of tropical Asia where the wild progenitor of rice occurs, weedy rice could be influenced by hybridization with the wild species. Genomic analysis of this phenomenon has been very limited. Here we use whole genome sequence analyses of 217 wild, weedy and cultivated rice samples to show that wild rice hybridization has contributed substantially to the evolution of Southeast Asian weedy rice, with some strains acquiring weed-adaptive traits through introgression from the wild progenitor. Our study highlights how adaptive introgression from wild species can contribute to agricultural weed evolution, and it provides a case study of parallel evolution of weediness in independently-evolved strains of a weedy crop relative.
    Matched MeSH terms: Plant Weeds/genetics
  10. Fulltext PHYTOTOXIC ACTIVITY OF GERANIOL-TREATED LEMONGRASS LEAF MULCH AGAINST COMMON WEEDS IN NURSERIES
    NORLIYANA FATIN OMAR, CHUAH TSE SENG
    UMT Journal of Undergraduate Research, 2019;1(1):1-11.
    MyJurnal
    Hand weeding continues to be one of the most laborious aspects of nursery
    maintenance. Oxygenated monoterpene, an important group of secondary metabolite found in
    essential oils, has a potential herbicidal activity that could be exploited as natural herbicide
    whereas organic mulch could delay weed emergence. Thus, this study aimed to examine the
    phytotoxicity of geraniol, an oxygenated monoterpene compound, in combination with
    lemongrass leaf mulch against three common weeds, Eleusine indica (grass), Cyperus distans
    (sedge), and Tridax procumbens (broadleaf). Greenhouse experiments were carried out by
    treating 4.0 t/ha lemongrass leaf mulch with 7.5% (v/v) geraniol compound. The pretreated
    mulch acted synergistically and inhibited the emergence and shoot growth of T. procumbens
    completely. However, the pretreated mulch exhibited a moderate inhibitory effect on C. distans
    emergence and growth. Geraniol-treated lemongrass leaf mulch acted synergistically and
    inhibited the emergence of E. indica by 72%, but it acted antagonistically and caused a 45%
    reduction of shoot biomass. The present findings suggest that geraniol-treated lemongrass leaf
    mulch has potent herbicidal activity but its phytotoxic effect is species-dependent.
    Matched MeSH terms: Plant Weeds
  11. Optimisation of culture composition for glyphosate degradation byBurkholderia vietnamiensisstrain AQ5-12
    Manogaran M, Shukor MY, Yasid NA, Khalil KA, Ahmad SA
    3 Biotech, 2018 Feb;8(2):108.
    PMID: 29430369 DOI: 10.1007/s13205-018-1123-4
    The herbicide glyphosate is often used to control weeds in agricultural lands. However, despite its ability to effectively kill weeds at low cost, health problems are still reported due to its toxicity level. The removal of glyphosate from the environment is usually done by microbiological process since chemical process of degradation is ineffective due to the presence of highly stable bonds. Therefore, finding glyphosate-degrading microorganisms in the soil of interest is crucial to remediate this glyphosate.Burkholderia vietnamiensisstrain AQ5-12 was found to have glyphosate-degrading ability. Optimisation of biodegradation condition was carried out utilising one factor at a time (OFAT) and response surface methodology (RSM). Five parameters including carbon and nitrogen source, pH, temperature and glyphosate concentration were optimised. Based on OFAT result, glyphosate degradation was observed to be optimum at fructose concentration of 6, 0.5 g/L ammonia sulphate, pH 6.5, temperature of 32 °C and glyphosate concentration at 100 ppm. Meanwhile, RSM resulted in a better degradation with 92.32% of 100 ppm glyphosate compared to OFAT. The bacterium was seen to tolerate up to 500 ppm glyphosate while increasing concentration results in reduced degradation and bacterial growth rate.
    Matched MeSH terms: Plant Weeds
  12. Fulltext Morphological study of the relationships between weedy rice accessions (Oryza sativa Complex) and commercial rice varieties in Pulau Pinang rice granary area
    Zainudin PMD Hussain, Azmi Man, Ahmad Sofiman Othman
    Trop Life Sci Res, 2010;21(2):-.
    MyJurnal
    Weedy rice (WR) is found in many direct-seeded rice fields. WR possesses morphological characteristics that are similar to cultivated rice varieties in the early stage of growth, making them more difficult to control than other weeds. A comparative morphological study was conducted by collecting WR accessions from four sites within the Pulau Pinang rice growing areas. The objective of the study was to characterise WR accessions of the Pulau Pinang rice granary by comparing their morphological characteristics to those of commercially grown rice in the area. Their morphometric relations were established by comparing 17 morphological characteristics of the WR accessions and the commercial varieties. A total of 36 WR morphotypes were identified from these 4 sites based on 17 characteristics, which included grain shattering habit and germination rate. The Principal Component Analysis (PCA) showed that 45.88% of the variation observed among the WR accessions and commercial varieties were within the first 3 axes. PB6, PP2 and SGA5 WR accessions had a higher number of tillers and longer panicle lengths, culm heights and leaf lengths compared to the commercial rice. The grain
    sizes of the commercial varieties were slightly longer, and the chlorophyll contents at 60–70 days after sowing (DAS) were higher than those of the WR accessions. Results from this study are useful for predicting potential WR accession growth, which might improve WR management and agriculture practices that control WR in the future.
    Matched MeSH terms: Plant Weeds
  13. Morphological Study of the Relationships between Weedy Rice Accessions (Oryza sativa Complex) and Commercial Rice Varieties in Pulau Pinang Rice Granary Area
    Hussain ZP, Man A, Othman AS
    Trop Life Sci Res, 2010 Dec;21(2):27-40.
    PMID: 24575197
    Weedy rice (WR) is found in many direct-seeded rice fields. WR possesses morphological characteristics that are similar to cultivated rice varieties in the early stage of growth, making them more difficult to control than other weeds. A comparative morphological study was conducted by collecting WR accessions from four sites within the Pulau Pinang rice growing areas. The objective of the study was to characterise WR accessions of the Pulau Pinang rice granary by comparing their morphological characteristics to those of commercially grown rice in the area. Their morphometric relations were established by comparing 17 morphological characteristics of the WR accessions and the commercial varieties. A total of 36 WR morphotypes were identified from these 4 sites based on 17 characteristics, which included grain shattering habit and germination rate. The Principal Component Analysis (PCA) showed that 45.88% of the variation observed among the WR accessions and commercial varieties were within the first 3 axes. PB6, PP2 and SGA5 WR accessions had a higher number of tillers and longer panicle lengths, culm heights and leaf lengths compared to the commercial rice. The grain sizes of the commercial varieties were slightly longer, and the chlorophyll contents at 60-70 days after sowing (DAS) were higher than those of the WR accessions. Results from this study are useful for predicting potential WR accession growth, which might improve WR management and agriculture practices that control WR in the future.
    Matched MeSH terms: Plant Weeds
  14. Maternal Mowing Effect on Seed Traits of an Invasive Weed, Erigeron annuus in Farmland
    Liu JH, Yong XH, Zhen Li, Du SF, Zhang ZW, Meng XF, et al.
    Sains Malaysiana, 2015;44:347-354.
    The effect of maternal mowing on seed traits of an invasive weed, Erigeron annuus, in farmland was discussed by
    comparing mowing plants with intact (no-mowing) plants. The maternal mowing effect resulted in the decrease of seed
    mass, achene size, pappus length and germination percentage and the increase of variation in achene size, pappus length,
    dispersal distance and germination non-uniformity. To some extent, the individuals suffered mowing might accelerate
    the environmental adaptation through the increase of these variations. Our study indicated the mean of mowing in
    farmland will restrain the growth and reproduction of weed E. annuus. However, it also increases the diversity of seeds
    through a more unequal provision to seeds that shares the risk and increases fitness to a wider range of heterogeneity
    of farmland condition.
    Matched MeSH terms: Plant Weeds
  15. Malaysian weedy rice shows its true stripes: wild Oryza and elite rice cultivars shape agricultural weed evolution in Southeast Asia
    Song BK, Chuah TS, Tam SM, Olsen KM
    Mol Ecol, 2014 Oct;23(20):5003-17.
    PMID: 25231087 DOI: 10.1111/mec.12922
    Weedy rice is a close relative of domesticated rice (Oryza sativa) that competes aggressively with the crop and limits rice productivity worldwide. Most genetic studies of weedy rice have focused on populations in regions where no reproductively compatible wild Oryza species occur (North America, Europe and northern Asia). Here, we examined the population genetics of weedy rice in Malaysia, where wild rice (O. rufipogon) can be found growing in close proximity to cultivated and weedy rice. Using 375 accessions and a combined analysis of 24 neutral SSR loci and two rice domestication genes (sh4, controlling seed shattering, and Bh4, controlling hull colour), we addressed the following questions: (i) What is the relationship of Malaysian weedy rice to domesticated and wild rice, and to weedy rice strains in the USA? (ii) To what extent does the presence of O. rufipogon influence the genetic and phenotypic diversity of Malaysian weeds? (iii) What do the distributions of sh4 and Bh4 alleles and associated phenotypes reveal about the origin and contemporary evolution of Malaysian weedy rice? Our results reveal the following: independent evolutionary origins for Malaysian weeds and US strains, despite their very close phenotypic resemblance; wild-to-weed gene flow in Malaysian weed populations, including apparent adaptive introgression of seed-shattering alleles; and a prominent role for modern Malaysian cultivars in the origin and recent proliferation of Malaysian weeds. These findings suggest that the genetic complexity and adaptability of weedy crop relatives can be profoundly influenced by proximity to reproductively compatible wild and domesticated populations.
    Matched MeSH terms: Plant Weeds/classification; Plant Weeds/genetics*
  16. Fulltext Invasive Weed Asystasia gangetica as a Potential Biomonitor and a Phytoremediator of Potentially Toxic Metals: A Case Study in Peninsular Malaysia
    Yap CK, Chew W, Al-Mutairi KA, Al-Shami SA, Nulit R, Ibrahim MH, et al.
    Int J Environ Res Public Health, 2021 04 28;18(9).
    PMID: 33924835 DOI: 10.3390/ijerph18094682
    The invasive weed Asystasia gangetica was investigated for its potential as a biomonitor and as a phytoremediator of potentially toxic metals (PTMs) (Cd, Cu, Ni, Pb, and Zn) in Peninsular Malaysia owing to its ecological resistance towards unfavourable environments. The biomonitoring potential of PTMs was determined based on the correlation analysis of the metals in the different parts of the plant (leaves, stems, and roots) and its habitat topsoils. In the roots, the concentrations (mg/kg dry weight) of Cd, Cu, Ni, Pb, and Zn ranged from 0.03 to 2.18, 9.22 to 139, 0.63 to 5.47, 2.43 to 10.5, and 50.7 to 300, respectively. In the leaves, the concentrations (mg/kg dry weight) of Cd, Cu, Ni, Pb, and Zn ranged from 0.03 to 1.16, 7.94 to 20.2, 0.03 to 6.13, 2.10 to 21.8, and 18.8 to 160, respectively. In the stems, the concentrations (mg/kg dry weight) of Cd, Cu, Ni, Pb, and Zn ranged from 0.03 to 1.25, 5.57 to 11.8, 0.23 to 3.69, 0.01 to 7.79, and 26.4 to 246, respectively. On the other hand, the phytoremediation potential of the five metals was estimated based on the bioconcentration factor (BCF) and the translocation factor (TF) values. Correlation analysis revealed that the roots and stems could be used as biomonitors of Cu, the stems as biomonitors of Ni, the roots and leaves as biomonitors of Pb, and all three parts of the plant as biomonitors of Zn. According to the BCF values, in the topsoil, the "easily, freely, leachable, or exchangeable" geochemical fractions of the five metals could be more easily transferred to the roots, leaves, and stems when compared with total concentrations. Based on the TF values of Cd, Ni, and Pb, the metal transfer to the stems (or leaves) from the roots was efficient (>1.0) at most sampling sites. The results of BCF and TF showed that A. gangetica was a good phytoextractor for Cd and Ni, and a good phytostabilizer for Cu, Pb, and Zn. Therefore, A. gangetica is a good candidate as a biomonitor and a phytoremediator of Ni, Pb, and Zn for sustainable contaminant remediation subject to suitable field management strategies.
    Matched MeSH terms: Plant Weeds
  17. Fulltext Integration of agronomic practices with herbicides for sustainable weed management in aerobic rice
    Anwar MP, Juraimi AS, Mohamed MT, Uddin MK, Samedani B, Puteh A, et al.
    ScientificWorldJournal, 2013;2013:916408.
    PMID: 24223513 DOI: 10.1155/2013/916408
    Till now, herbicide seems to be a cost effective tool from an agronomic view point to control weeds. But long term efficacy and sustainability issues are the driving forces behind the reconsideration of herbicide dependent weed management strategy in rice. This demands reappearance of physical and cultural management options combined with judicious herbicide application in a more comprehensive and integrated way. Keeping those in mind, some agronomic tools along with different manual weeding and herbicides combinations were evaluated for their weed control efficacy in rice under aerobic soil conditions. Combination of competitive variety, higher seeding rate, and seed priming resulted in more competitive cropping system in favor of rice, which was reflected in lower weed pressure, higher weed control efficiency, and better yield. Most of the herbicides exhibited excellent weed control efficiency. Treatments comprising only herbicides required less cost involvement but produced higher net benefit. On the contrary, treatments comprising both herbicide and manual weeding required high cost involvement and thus produced lower net benefit. Therefore, adoption of competitive rice variety, higher seed rate, and seed priming along with spraying different early-postemergence herbicides in rotation at 10 days after seeding (DAS) followed by a manual weeding at 30 DAS may be recommended from sustainability view point.
    Matched MeSH terms: Plant Weeds/drug effects*
  18. High Throughput Residue Analysis of Indaziflam and its Metabolites in Palm Oil Using Liquid Chromatography-Tandem Mass Spectrometry
    Halim N, Kuntom A, Shinde R, Banerjee K
    J AOAC Int, 2020 Sep 01;103(5):1237-1242.
    PMID: 33241391 DOI: 10.1093/jaoacint/qsaa041
    BACKGROUND: Indaziflam (IND) is a herbicide that is used in palm oil plantations for broad spectrum management of weeds. Until now, no validated method has been available for residue estimation of this herbicide in palm oil products.

    OBJECTIVE: In this study, we report a rapid method for the residue analysis of IND and its metabolites, viz., IND-carboxylic acid, diaminotriazine, and triazine indanone in a wide range of palm oil matrices using liquid chromatography-tandem mass spectrometry (LC-MS/MS).

    METHOD: The optimized sample preparation workflows included two options: (1) acetonitrile extraction (QuEChERS workflow), followed by freezing at -80°C and (2) acetonitrile extraction, followed by cleanup through a C18 solid phase extraction (SPE) cartridge. The optimized LC runtime was 7 min. All these analytes were estimated by LC-MS/MS multiple reaction monitoring.

    RESULTS: Both sample preparation methods provided similar method performance and acceptable results. The limit of quantification (LOQ) of IND, IND-carboxylic acid, and triazine indanone was 0.001 mg/kg. For diaminotriazine, the LOQ was 0.005 mg/kg. The method accuracy and precision complied with the SANTE/12682/2019 guidelines of analytical quality control.

    CONCLUSIONS: The potentiality of the method lies in a high throughput analysis of IND and its metabolites in a single chromatographic run with high selectivity and sensitivity. Considering its fit-for-purpose performance, the method can be implemented in regulatory testing of IND residues in a wide range of palm oil matrices that are consumed and traded worldwide.

    HIGHLIGHTS: This work has provided a validated method for simultaneous residue analysis of indaziflam and its metabolites in crude palm oil and its derived matrices with high sensitivity, selectivity, and throughput.

    Matched MeSH terms: Plant Weeds
  19. Fulltext Genomic insights into the evolution of Echinochloa species as weed and orphan crop
    Wu D, Shen E, Jiang B, Feng Y, Tang W, Lao S, et al.
    Nat Commun, 2022 02 03;13(1):689.
    PMID: 35115514 DOI: 10.1038/s41467-022-28359-9
    As one of the great survivors of the plant kingdom, barnyard grasses (Echinochloa spp.) are the most noxious and common weeds in paddy ecosystems. Meanwhile, at least two Echinochloa species have been domesticated and cultivated as millets. In order to better understand the genomic forces driving the evolution of Echinochloa species toward weed and crop characteristics, we assemble genomes of three Echinochloa species (allohexaploid E. crus-galli and E. colona, and allotetraploid E. oryzicola) and re-sequence 737 accessions of barnyard grasses and millets from 16 rice-producing countries. Phylogenomic and comparative genomic analyses reveal the complex and reticulate evolution in the speciation of Echinochloa polyploids and provide evidence of constrained disease-related gene copy numbers in Echinochloa. A population-level investigation uncovers deep population differentiation for local adaptation, multiple target-site herbicide resistance mutations of barnyard grasses, and limited domestication of barnyard millets. Our results provide genomic insights into the dual roles of Echinochloa species as weeds and crops as well as essential resources for studying plant polyploidization, adaptation, precision weed control and millet improvements.
    Matched MeSH terms: Plant Weeds/classification; Plant Weeds/genetics*
  20. Fuzzy inference optimization algorithms for enhancing the modelling accuracy of wastewater quality parameters
    Abunama T, Ansari M, Awolusi OO, Gani KM, Kumari S, Bux F
    J Environ Manage, 2021 Sep 01;293:112862.
    PMID: 34049159 DOI: 10.1016/j.jenvman.2021.112862
    To ensure the safe discharge of treated wastewater to the environment, continuous efforts are vital to enhance the modelling accuracy of wastewater treatment plants (WWTPs) through utilizing state-of-art techniques and algorithms. The integration of metaheuristic modern optimization algorithms that are natlurally inspired with the Fussy Inference Systems (FIS) to improve the modelling performance is a promising and mathematically suitable approach. This study integrates four population-based algorithms, namely: Particle swarm optimization (PSO), Genetic algorithm (GA), Hybrid GA-PSO, and Mutating invasive weed optimization (M-IWO) with FIS system. A full-scale WWTP in South Africa (SA) was selected to assess the validity of the proposed algorithms, where six wastewater effluent parameters were modeled, i.e., Alkalinity (ALK), Sulphate (SLP), Phosphate (PHS), Total Kjeldahl Nitrogen (TKN), Total Suspended Solids (TSS), and Chemical Oxygen Demand (COD). The results from this study showed that the hybrid PSO-GA algorithm outperforms the PSO and GA algorithms when used individually, in modelling all wastewater effluent parameters. PSO performed better for SLP and TKN compared to GA, while the M-IWO algorithm failed to provide an acceptable modelling convergence for all the studied parameters. However, three out of four algorithms applied in this study proven beneficial to be optimized in enhancing the modelling accuracy of wastewater quality parameters.
    Matched MeSH terms: Plant Weeds
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