Black-shouldered Kite (Elanus caeruleus) is a well-known raptor that inhabits open areas such as oil palm plantation or paddy field. To determine preferable habitat and nesting site of Black-shouldered Kite in oil palm landscape, we conducted a study on Black-shouldered Kite's nesting biology in Carey Island, Selangor, Malaysia. We divided the island into six types of habitat and conducted road-side count of Black-shouldered Kite from April 2009 to February 2011. Whenever the Black-shouldered Kite was detected, we thoroughly searched the surrounding area for their nest. In total, we have recorded forty nests. The nests were built on 15 species of trees but most of the trees shared common physical characteristics. Some novice breeders also used oil palm tree as their nesting site. Structure and building materials of nests constructed on oil palm trees were different from nests built on other trees. Of all breeding attempts, only four nests which were located in residential area adjacent to young oil palm habitat were successful. Among important characteristics of successful nesting site include taller trees with strong branches and good leaf coverage. These trees not only protect nests from predator detection (except from other predatory birds) and physical environment but also facilitate Black-shouldered Kite's foraging activities by providing good vantage point.
Introduction: Entomological surveillance is crucial to determine the abundance of dengue vector and to evaluate breeding areas of Aedes aegypti and Aedes albopictus. The objective of this study is to determine the distribution and breeding preference for both Ae. aegypti and Ae. albopictus in dengue endemic areas. Materials and Methods: Ovitraps surveillance was conducted in two dengue endemic areas; AU2, Keramat and Seksyen 7, Shah Alam, Selangor. A minimum number of 100 ovitraps were deployed for 5 days in the study sites. Samples collected were brought back to the lab and all larvae recovered were identified to species level. Results: The ovitap index (OI) in both localities exceeded the transmission threshold of 10% with the OI recorded ranged from 42.3-79.8% in AU2, Keramat and 16.7-42.9% in Seksyen 7, Shah Alam. Ae. albopictus was the dominant species in AU2 Keramat with the highest ratio Ae. aegypti to Ae. albopictus recorded was 1.00:22.79. Nonetheless, in Seksyen 7, Shah Alam the difference in Ae. aegypti to Ae. albopictus ratio is not really prominent with 1.00:3.61 for ovitraps deployed outdoor and 3.40:1.00 for ovitraps set indoor. It was determined that single infestation of either Ae. aegypti or Ae. albopictus is more frequent for ovitraps deployed indoor and/or outdoor, respectively. It was also determined that mixed infestations were found in this study indicating that both species can oviposit in the same container. Conclusion: This study indicates that OI is still above transmission threshold in both study sites. While Ae. aegypti and Ae. albopictus remain as a dominant indoor and outdoor breeder, respectively, mixed breeding of Aedes species in a same container was also observed.
A field experiment was conducted from June to December, 2013 to study the genetic diversity of 15 modern T. Aman rice
varieties of Bangladesh (Oryza sativa L.) with a view to assess the superior genotype in future hybridization program
for developing new rice varieties that is suitable for the target environment. Analysis of variance for each trait showed
significant differences among the varieties. High heritability associated with high genetic advance in percent of mean
was observed for plant height and thousand seed weight which indicated that selection for these characters would be
effective. Hence, thrust has to be given for these characters in future breeding program to improve the yield trait in rice.
Multivariate analysis based on 10 agronomic characters indicated that the 15 varieties were grouped into four distant
clusters. The inter cluster distance was maximum between cluster II and cluster IV. The highest intra-cluster distance was
found in cluster IV. Based on positive value of vector 1 and vector 2, plant height and 1000-seed weight had maximum
contribution towards genetic divergence. From the results, it can be concluded that the varieties BRRI dhan40, BRRI
dhan44, BRRI dhan46, BRRI dhan49 and BINA dhan7 may be selected for future hybridization program.
Recently, rice breeding program has shown increased interests on the pigmented rice varieties due to their benefits to human health. However, the genetic variation of pigmented rice varieties is still scarce and remains unexplored. Hence, we performed genome-wide SNP analysis from the genome resequencing of four Malaysian pigmented rice varieties, representing two black and two red rice varieties. The genome of four pigmented varieties was mapped against Nipponbare reference genome sequences, and 1.9 million SNPs were discovered. Of these, 622 SNPs with polymorphic sites were identified in 258 protein-coding genes related to metabolism, stress response, and transporter. Comparative analysis of 622 SNPs with polymorphic sites against six rice SNP datasets from the Ensembl Plants variation database was performed, and 70 SNPs were identified as novel SNPs. Analysis of SNPs in the flavonoid biosynthetic genes revealed 40 nonsynonymous SNPs, which has potential as molecular markers for rice seed colour identification. The highlighted SNPs in this study show effort in producing valuable genomic resources for application in the rice breeding program, towards the genetic improvement of new and improved pigmented rice varieties.
Chrysanthemum morifolium is an important temperate cut flower for Malaysian floriculture
industry and the lack of new local owned varieties led to this mutation breeding research. The
objective of this study was to compare the effectiveness of ion beam irradiation in generating
mutations on ray florets and nodal explants of Chrysanthemum morifolium cv. ‘Reagan Red’. Ion
beams has become an efficient physical mutagen for mutation breeding. The ray florets and nodal
explants were irradiated with ion beams at doses 0, 0.5, 1.0, 2.0, 3.0, 5.0, 8.0, 10, 15, 20 and 30 Gy.
The 50% of in vitro shoot regeneration (RD50) for ray florets explants was 2.0 Gy and for nodal
explants was 4.0 Gy. Thus, relative biological effectiveness (RBE) for ray florets was found 2.0
times higher than the nodal explants. The regenerated plantlets were planted in the greenhouse at
MARDI, Cameron Highlands for morphological screening. Overall performance of survival
plantlets derived from in vitro nodal and ray floret explants was recorded. The characters studied
include plant morphology and flowering characteristic. The ray florets explants were found to be
more sensitive to ion beam irradiation and generated more mutations as compared to nodal
explants.
Scrotal circumference (SC) and testicular volume (TV) were measured in 65 swamp buffalo bulls ranging in age from 7 to 60 months and weighing 130 kg to 560 kg. Ages and body weight (BW) were recorded for each male at the time of measurement to find out if they correlated with SC and TV. SC and TV increased linearly and correlated significantly with age and BW (SC vs age: r=0.74, p<0.01; SC vs BW: r=0.88, p<0.01; TV vs BW: r=0.82, p<0.01). SC measurements ranged from 15.1+/-1.1 cm to 24.0+/-0.4 cm for ages ranging from 10.0+/-0.6 to 48.5+/-6.3 months, revealing that testicular size in swamp buffaloes was very much smaller than domestic cattle. The SC norms distributed with age would be useful in the evaluation of swamp buffalo males for breeding soundness.
Forty Droughtmaster bulls were evaluated for breeding soundness, using the method of examination and criteria for classifying bulls of the Society for Theriogenelogy. Eighty three percent of the bulls were classified as satisfactory, 14 percent as questionable and 3 percent as unsatisfactory breeders. Scrotal circumference for 2 to 8-year-old bulls were smaller in questionable and unsatisfactory bulls, as compared to satisfactory bulls. For bulls rated as satisfactory breeders, the scrotal circumference of 37 to 43 cms was higher than for other beef breeds. Three related bulls (2 questionable, 1 satisfactory) carried sperm defects classified as 'knobbed' (38 +/- 3%), 'Dag' (40 +/- 4%) and 'pseudo-droplets' (41 +/- 5%), which may adversely affect fertility.
A complete diallel cross of four broiler breeds was made to investigate whether there are breed differences in the combining abilities for the traits, body weight, weight gain and feed efficiency, measured during the growing period from 4 to 12 weeks of age. Data collected from male and female birds were analysed separately. General combining ability (GCA) was found to be the largest and most significant source of variation contributing to differences between crosses for all the traits, in both male and female birds. Specific combining ability (SCA) was important for body weight in both sexes and for weight gain in females. Feed efficiency in both sexes did not appear to be influenced by SCA effects. Reciprocal effects (RE) were generally absent in both sexes for all the traits, except possibly for feed efficiency.
Molecular techniques involving the application of DNA based molecular markers for the conservation and management of endemic and endangered species have assumed significance as
genome sequencing projects have generated an extensive database which can be mined for informative genomic regions. Scientific approaches towards conservation involve several stages, which encompass determination of appropriate genomic regions for characterization, design and testing of specific molecular markers, screening of multiple populations and statistical treatment and
interpretation of data. Population data can be utilized to develop controlled breeding and relocation programs aimed at ensuring that genetic diversity within populations of endangered species is
sustained within the context of an overall conservation program. The information derived as a result of this approach can be applied to establish a scientific and legal framework for the conservation of endemic species. Species specific genomic markers can be applied to enforce the implementation of CITES within the guidelines of a national biodiversity conservation policy.
The central coast of Tamil Nadu, Andaman and Nicobar Islands, along with other regions, was severely hit by the tsunami on 26 December 2004. A strange spawning behaviour of the Indian horseshoe crabs (Tachypleus gigas, Müller) was observed after the tsunami disturbance. Along the northeast coast of India, the horseshoe crabs normally migrate towards the shore in large numbers coinciding with the tidal height and grain size of the sediment and spawn in nests made in sand. The spawning behaviour was normal until November 2004 and throughout that period about 35 to 45 nests in 200 m2 of area of the breeding beach were examined. However, no nesting was observed from December 2004 to March 2005, i.e. after the occurrence of tsunami. The number of nests per 200 m2 of area (~82) and the number of eggs per nest (750-1000 eggs) were increased considerably when the normal conditions were restored in April 2005. The absence of spawning migration, from December 2004 to March 2005, is totally an unusual behaviour and this happened for the first time during the past several years of the study period.
Swiftlet
s
are small insectivorous birds which breed throughout Southeast Asia and
the South Pacific.
Among many swiftle
t species, only a few are notable to produce edible bird’s
nest
s
(EBN) from the secreted saliva during breeding seasons.
The taxonomy of swiftlet
s
remains one of the most controversial in the avian species due to the high similarity in
morphological charac
teristics among the species. Over the last few decades, researchers have
studied the taxonomy of swiftlet
s
based on the morphological
trade
, behavior, and genetic
traits
.
However, despite all the efforts,
the
swiftlet taxonomy remains unsolved.
The
EBN is one of
the
most expensive animal products
and frequently being referred
to
as the “
Caviar of the East
”.
The
EBN market value varies from
US
$1000.00 to
US
$10,000.00 per kilogram depend
ing
on
its grade, shape, type and origin.
Hence, bird’s nest harve
sting is considered a lucrative industry
in many countries in Southeast Asia.
However,
the
industry faced several challenges over the
decades such as the authenticity of the EBN, the quality assurance and the depletion of swiftlet
population. Furthermore,
there is limited scientific evidence regarding EBN’s medical benefits
as
claimed by manufacturers. This paper reviews the taxonomy of swiftlet
s
, its morphological
characteristics, the challenges currently encountered by the industry, and finally the
compos
ition and medical benefits of EBN.
Seagrasses provide a range of marine ecosystem services. These include coastal protection, biodiversity, provision of food for various organisms, breeding and nursery habitats for many marine species, and carbon storage. Increasing anthropogenic pressures have contributed to the decline of seagrass habitats. Transplantation is one of the solutions to increase seagrass coverage and resilience. What is often overlooked, however, is the ability of this tropical ecosystem to attract and support faunal assemblages that may impinge on the success of the transplantation. A pilot study on seagrass transplantation at Gaya Island (Kota Kinabalu, Sabah) was intended for observing its stability and species of fauna that develop association with this vegetation. The study covered the southwest and northeast monsoons. Mixed seagrass species were planted on approximately 50% of 30 m 2 transplantation areas. Monitoring of the planted seagrass was carried out in five phases (T1-T5) from September 2016 to April 2018. Weekly observations were made by SCUBA diving. Identification of associated fauna was done on the spot and was based on morphological characteristics. During the T1 (September to December 2016) the seagrass coverage was reduced to 41% due to strong waves generated by the northeast monsoon. However, the seagrass coverage increased ( 66 %) during the southwest monsoon (T2 - T4) in 2017. In early 2018 (T5), the seagrass coverage again reduced (about 18%) due to strong waves but recovered again at the end of the monitoring period (April 2018). A total of 30 species of fauna that were identified consisted of 9 resident and 21 non-resident species. Physical structure of transplanted seagrass created a microhabitat, and increased the food availability and abundance, which attracted many species of different trophic levels.
Breeding territoriality plays a role in determining the reproduction outcome of many passerines species. The spot-mapping was used to estimate the breeding territory size of a territorial male of Oriental Magpie robin (Cospychus saularis) at Dahlia College, Universiti Malaysia Sarawak which is located within Kota Samarahan. It was conducted by mapping the song perching locations established by a marked male. The breeding territory size of the male was estimated to be 0.78 hectares. The data analysis was done using Minimum Convex Polygon (MCP) which was constructed by using Google Earth Pro software. Study on breeding territory size of this bird species is crucial to understand more regarding the breeding behaviour of this species. Data on the behavior of this species could be used for future studies of this bird in Borneo.
Bacterial leaf blight (BLB) is one of the major rice diseases in Malaysia. This disease causes substantial yield loss as high as 70%. Development of rice varieties which inherited BLB resistant traits is a crucial approach to promote and sustain rice industry in Malaysia. Hence, this study aims were to enhance BLB disease resistant characters of high yielding commercial variety MR219 through backcross breeding approach with supporting tool of marker-assisted selection (MAS). Broad spectrum BLB resistance gene, Xa7 from donor parent IRBB7 were introgressed into the susceptible MR219 (recurrent parent) using two flanking markers ID7 and ID15. At BC3F4, we managed to generate 19 introgressed lines with homozygous Xa7 gene and showed resistant characteristics as donor parent when it was challenged with Xanthomonas oryzae pv. oryzae through artificial inoculation. Recurrent parent MR219 and control variety, MR263 were found to be severely infected by the disease. The improved lines exhibited similar morphological and yield performance characters as to the elite variety, MR219. Two lines, PB-2-107 and PB-2-34 were chosen to be potential lines because of their outstanding performances compared to parent, MR219. This study demonstrates a success story of MAS application in development of improved disease resistance lines of rice against BLB disease.
The contamination of aquaculture products and effluents by contaminants of emerging concern (CECs) from the direct chemical use in aquaculture activities or surrounding industries is currently an issue of increasing concern as these CECs exert acute and chronic effects on living organisms. CECs have been detected in aquaculture water, sediment, and culture species, and antibiotics, antifoulants, and disinfectants are the commonly detected groups. Through accumulation, CECs can reside in the tissue of aquaculture products and eventually consumed by humans. Currently, effluents containing CECs are discharged to the surrounding environment while producing sediments that eventually contaminate rivers as receiving bodies. The rearing (grow-out) stages of aquaculture activities are issues regarding CECs-contamination in aquaculture covering water, sediment, and aquaculture products. Proper regulations should be imposed on all aquaculturists to control chemical usage and ensure compliance to guidelines for appropriate effluent treatment. Several techniques for treating aquaculture effluents contaminated by CECs have been explored, including adsorption, wetland construction, photocatalysis, filtration, sludge activation, and sedimentation. The challenges imposed by CECs on aquaculture activities are discussed for the purpose of obtaining insights into current issues and providing future approaches for resolving associated problems. Stakeholders, such as researchers focusing on environment and aquaculture, are expected to benefit from the presented results in this article. In addition, the results may be useful in establishing aquaculture-related CECs regulations, assessing toxicity to living biota, and preventing pollution.
Amphibians show a variety of reproductive modes and strategies. The cyclicity and continuity of reproduction can often be predicted from the annual gonadosomatic index trends in a species specific manner. This research aims to document the female and male gonadosomatic index profiles and to ascertain the reproductive cyclicity or continuity of Fejervarya limnocharis (Anura: Ranidae) caught in Mae Sot, Tak Province, Thailand. Frogs were collected monthly between November 2007 and October 2009 in rice fields and their surrounding areas in the study site. For each frog, total weight and ovarian/testicular weight were measured to obtain the female and male gonadosomatic index. The number of female individuals with mature eggs (postvitellogenic eggs) was also counted. The results showed that female frogs had two main surges of increased GSI in March and September of 2008. Alternatively, male frogs showed a more gradual increase and decrease in gonadosomatic index, thus the index remaining high throughout the year. This study concluded that while F. limnocharis in this area is essentially a continuous breeder, it is more optimized for a cyclic reproduction mode with two breeding cycles during the rainy season.
The inexorable exposure of plants to the combinations of abiotic stresses has affected the worldwide food supply. The crop improvement against these abiotic stresses has been captivating approach to increase the yield and enhance the stress tolerance. By using traditional and modern breeding methods, the characters that confer tolerance to these stresses were accomplished. No doubt genetic engineering and molecular breeding have helped in comprehending the intricate nature of stress response. Understanding of abiotic stress-involved cellular pathways provides vital information on such responses. On the other hand, genomic research for crop improvement has raised new assessments in breeding new varieties against abiotic stresses. Interpretation of responses of the crop plants under stress is of great significance by studying the main role of crops in food and biofuel production. This review presents genomic-based approaches revealing the complex networks controlling the mechanisms of abiotic stress tolerance, and the possible modes of assimilating information attained by genomic-based approaches due to the advancement in isolation and functional analysis of genes controlling the yield and abiotic stress tolerance are discussed.
Radionuclides released from nuclear contamination harm the environment and human health. Nuclear pollution spread over large areas and the costs associated with decontamination is high. Traditional remediation methods include both chemical and physical, however, these are expensive and unsuitable for large-scale restoration. Bioremediation is the use of plants or microorganisms to remove pollutants from the environment having a lower cost and can be upscaled to eliminate contamination from soil, water and air. It is a cheap, efficient, ecologically, and friendly restoration technology. Here we review the sources of radionuclides, bioremediation methods, mechanisms of plant resistance to radionuclides and the effects on the efficiency of biological adsorption. Uptake of radionuclides by plants can be facilitated by the addition of appropriate chemical accelerators and agronomic management, such as citric acid and intercropping. Future research should accelerate the use of genetic engineering and breeding techniques to screen high-enrichment plants. In addition, field experiments should be carried out to ensure that this technology can be applied to the remediation of nuclear contaminated sites as soon as possible.
Natural and man-made ecosystems worldwide are subjected to flooding, which is a form of environmental stress. Genetic variability in the plant response to flooding involves variations in metabolism, architecture, and elongation development that are related with a low oxygen escape strategy and an opposing quiescence scheme that enables prolonged submergence endurance. Flooding is typically associated with a decrease in O2 in the cells, which is especially severe when photosynthesis is absent or limited, leading to significant annual yield losses globally. Over the past two decades, considerable advancements have been made in understanding of mechanisms of rice adaptation and tolerance to flooding/submergence. The mapping and identification of Sub1 QTL have led to the development of marker-assisted selection (MAS) breeding approach to improve flooding-tolerant rice varieties in submergence-prone ecosystems. The Sub1 incorporated in rice varieties showed tolerance during flash flood, but not during stagnant conditions. Hence, gene pyramiding techniques can be applied to combine/stack multiple resistant genes for developing flood-resilient rice varieties for different types of flooding stresses. This review contains an update on the latest advances in understanding the molecular mechanisms, metabolic adaptions, and genetic factors governing rice flooding tolerance. A better understanding of molecular genetics and adaptation mechanisms that enhance flood-tolerant varieties under different flooding regimes was also discussed.