Browse publications by year: 2018

  1. Maddirevula S, AlZahrani F, Anazi S, Almureikhi M, Ben-Omran T, Abdel-Salam GMH, et al.
    Genet Med, 2018 01;20(1):64-68.
    PMID: 28640246 DOI: 10.1038/gim.2017.78
    PurposeGenome-wide association studies (GWAS) have been instrumental to our understanding of the genetic risk determinants of complex traits. A common challenge in GWAS is the interpretation of signals, which are usually attributed to the genes closest to the polymorphic markers that display the strongest statistical association. Naturally occurring complete loss of function (knockout) of these genes in humans can inform GWAS interpretation by unmasking their deficiency state in a clinical context.MethodsWe exploited the unique population structure of Saudi Arabia to identify novel knockout events in genes previously highlighted in GWAS using combined autozygome/exome analysis.ResultsWe report five families with homozygous truncating mutations in genes that had only been linked to human disease through GWAS. The phenotypes observed in the natural knockouts for these genes (TRAF3IP2, FRMD3, RSRC1, BTBD9, and PXDNL) range from consistent with, to unrelated to, the previously reported GWAS phenotype.ConclusionWe expand the role of human knockouts in the medical annotation of the human genome, and show their potential value in informing the interpretation of GWAS of complex traits.
    MeSH terms: Alleles; Genetics, Population; Genotype; Humans; Phenotype; Saudi Arabia; Genome, Human*; Facies; Genetic Predisposition to Disease; Genetic Association Studies
  2. Haruna E, Zin NM, Kerfahi D, Adams JM
    Microb Ecol, 2018 Jan;75(1):88-103.
    PMID: 28642991 DOI: 10.1007/s00248-017-1002-2
    The extent to which distinct bacterial endophyte communities occur between different plant organs and species is poorly known and has implications for bioprospecting efforts. Using the V3 region of the bacterial 16S ribosomal RNA (rRNA) gene, we investigated the diversity patterns of bacterial endophyte communities of three rainforest plant species, comparing leaf, stem, and root endophytes plus rhizosphere soil community. There was extensive overlap in bacterial communities between plant organs, between replicate plants of the same species, between plant species, and between plant organ and rhizosphere soil, with no consistent clustering by compartment or host plant species. The non-metric multidimensional scaling (NMDS) analysis highlighted an extensively overlapping bacterial community structure, and the β-nearest taxon index (βNTI) analysis revealed dominance of stochastic processes in community assembly, suggesting that bacterial endophyte operational taxonomic units (OTUs) were randomly distributed among plant species and organs and rhizosphere soil. Percentage turnover of OTUs within pairs of samples was similar both for plant individuals of the same species and of different species at around 80-90%. Our results suggest that sampling extra individuals, extra plant organs, extra species, or use of rhizosphere soil, might be about equally effective for obtaining new OTUs for culture. These observations suggest that the plant endophyte community may be much more diverse, but less predictable, than would be expected from culturing efforts alone.
    MeSH terms: Bacteria/classification; Bacteria/genetics; Bacteria/isolation & purification*; DNA, Bacterial/genetics; Phylogeny; Plants/classification; Plants/microbiology*; RNA, Ribosomal, 16S/genetics; Soil/chemistry; Soil Microbiology*; Plant Leaves/microbiology; Plant Roots/microbiology; Plant Stems/microbiology; Biodiversity; Rhizosphere; Endophytes/classification; Endophytes/genetics; Endophytes/isolation & purification*; Rainforest
  3. Mohamad NE, Keong Yeap S, Beh BK, Romli MF, Yusof HM, Kristeen-Teo YW, et al.
    J Sci Food Agric, 2018 Jan;98(2):534-540.
    PMID: 28631270 DOI: 10.1002/jsfa.8491
    BACKGROUND: Vinegar is widely used as a food additive, in food preparation and as a food supplement. This study compared the phenolic acid profiles and in vivo toxicities, and antioxidant and immunomodulatory effects of coconut, nipah and pineapple juice vinegars, which were respectively prepared via a two-step fermentation using Saccharomyces cerevisiae 7013 INRA and Acetobacter aceti vat Europeans.

    RESULTS: Pineapple juice vinegar, which had the highest total phenolic acid content, also exhibited the greatest in vitro antioxidant capacity compared to coconut juice and nipah juice vinegars. Following acute and sub-chronic in vivo toxicity evaluation, no toxicity and mortality were evident and there were no significant differences in the serum biochemical profiles between mice administered the vinegars versus the control group. In the sub-chronic toxicity evaluation, the highest liver antioxidant levels were found in mice fed with pineapple juice vinegar, followed by coconut juice and nipah juice vinegars. However, compared to the pineapple juice and nipah juice vinegars, the mice fed with coconut juice vinegar, exhibited a higher population of CD4+ and CD8+ T-lymphocytes in the spleen, which was associated with greater levels of serum interleukin-2 and interferon-γ cytokines.

    CONCLUSIONS: Overall, the data suggested that not all vinegar samples cause acute and sub-chronic toxicity in vivo. Moreover, the in vivo immunity and organ antioxidant levels were enhanced, to varying extents, by the phenolic acids present in the vinegars. The results obtained in this study provide appropriate guidelines for further in vivo bioactivity studies and pre-clinical assessments of vinegar consumption. © 2017 Society of Chemical Industry.

    MeSH terms: Fruit and Vegetable Juices/analysis*; Fruit and Vegetable Juices/microbiology; Fruit and Vegetable Juices/toxicity; Acetobacter/metabolism; Animals; Antioxidants/analysis*; Antioxidants/metabolism; Antioxidants/toxicity; Cocos/metabolism; Cocos/microbiology; Cocos/chemistry*; Fermentation; Immunologic Factors/analysis*; Immunologic Factors/metabolism; Immunologic Factors/toxicity; Interferon-gamma/immunology; Interleukin-2/immunology; Male; Mice, Inbred BALB C; Saccharomyces cerevisiae/metabolism; T-Lymphocytes/cytology; T-Lymphocytes/immunology; Acetic Acid/analysis*; Acetic Acid/metabolism; Acetic Acid/toxicity; Arecaceae/metabolism; Arecaceae/microbiology; Arecaceae/chemistry*; Ananas/metabolism; Ananas/microbiology; Ananas/chemistry*; Mice
  4. Swami V, Barron D, Weis L, Furnham A
    Br J Psychol, 2018 Feb;109(1):156-179.
    PMID: 28632335 DOI: 10.1111/bjop.12252
    We used an identities approach to examine voting intentions in the June 2016 UK referendum on membership of the European Union (EU). In April 2016, 303 British adults (58.7% women, age M = 34.73) indicated their voting intentions for the referendum and completed measures of identification with the national in-group, perceived threat from Muslim immigrants, belief in Islamophobic conspiracy narratives, Islamophobia, general conspiracist beliefs, ambiguity tolerance, and belief in a clash of civilizations. Path and mediation analyses indicated that greater belief in Islamophobic conspiracy theories mediated the link between Islamophobia and intention to vote to leave. Islamophobia and Islamophobic conspiracist beliefs also mediated the effects of perceived threat from Muslims on voting intentions. Other variables acted as antecedents of perceived threat or Islamophobic conspiracy narratives. These findings highlight the role that identity-based cognitions may have played in shaping voting intentions for the UK EU referendum.
    MeSH terms: Adolescent; Adult; Aged; European Union; Female; Great Britain; Group Processes*; Humans; Islam/psychology*; Male; Middle Aged; Politics*; Intention*; Emigrants and Immigrants/psychology*; Young Adult; Racism/psychology*; Racism/statistics & numerical data
  5. El-Baz AF, El-Enshasy HA, Shetaia YM, Mahrous H, Othman NZ, Yousef AE
    Probiotics Antimicrob Proteins, 2018 Mar;10(1):77-88.
    PMID: 28634812 DOI: 10.1007/s12602-017-9291-9
    A new yeast strain with promising probiotic traits was isolated from the Red Sea water samples. The isolate (YMHS) was subjected to genetic characterization and identified as Cryptococcus sp. Nucleotide sequence analysis of the rRNA gene internal transcribed spacer regions showed 95% sequence similarity between the isolate and Cryptococcus albidus. Cryptococcus sp. YMHS exhibited desirable characteristics of probiotic microorganisms; it has tolerance to low pH in simulated gastric juice, resistance to bile salts, hydrophobic characteristics, broad antimicrobial activity, and in vitro ability to degrade cholesterol. The isolate grew well in a semi-defined medium composed of yeast extract, glucose, KH2PO4, (NH4)2SO4, and MgSO4, yielding cell mass of 2.32 and 5.82 g/l in shake flask and in bioreactor cultures, respectively. Fed-batch cultivation, with controlled pH, increased the biomass gradually in culture, reaching 28.5 g/l after 32 h cultivation. Beside the feasible use as a probiotic, the new strain also could be beneficial in the development of functional foods or novel food preservatives. To our knowledge, this is the first report of yeast with probiotic properties isolated from the Red Sea.
  6. Ahmed HMA, Neelakantan P, Dummer PMH
    Int Endod J, 2018 Feb;51(2):164-176.
    PMID: 28635100 DOI: 10.1111/iej.12800
    Thorough knowledge of anatomical complexities of the root canal system has a direct impact on the effectiveness of canal preparation and filling, and is an essential prerequisite for successful root canal treatment. A wide range of complex variations in root canal anatomy exists, including root canal configuration type, developmental anomalies and minor canal morphology such as accessory canals and apical deltas. Accessory canals and apical deltas have been associated with pulp disease, primary canal infection, canal reinfection and post-treatment disease. The current definitions of accessory canal anatomy are not standardized and potentially confusing. Given their role in endodontic disease and their impact on treatment outcomes, there is a need to have a simple classification of their anatomy to provide an accurate description of their position and path from the canal to the external surface of the root. The purpose of this article is to introduce a new system for classifying accessory canal morphology for use in research, clinical practice and training.
    MeSH terms: Anatomy/classification; Dental Pulp Cavity/anatomy & histology*; Humans; Anatomic Variation*
  7. Al-Dualimi DW, Shah Abdul Majid A, Al-Shimary SFF, Al-Saadi AA, Al Zarzour R, Asif M, et al.
    Drug Chem Toxicol, 2018 Jan;41(1):82-88.
    PMID: 28635332 DOI: 10.1080/01480545.2017.1317785
    Herbal products contain a variety of compounds which may be useful in protecting against cellular damage caused by mutagens. Orthosiphon stamineus (O.s) also known as Cat whiskers. The herb has been shown anti-oxidative properties and can modulate key cellular proteins that have cytoprotective effect. The study aimed to evaluate the effects of different doses (250, 500 and 1000 mg kg-1) of 50% ethanol extract of O.s (Et. O.s) on micro-nucleated polychromatic erythrocytes (MNPCE), Polychromatic to normachromatic erythrocytes ratio (PCE/NCE), Mitotic index (MI), and Chromosomal aberration (CA) in Bab/c mice. Moreover, these parameters were used to evaluate the anti-genotoxic and clastogenic potencies of (Et. O.s) against mitomycin c (MMC) that interact with biological molecules and induce genotoxic and clastogenic disorders in non-tumor cells. MMC (4 mg kg-1) was injected intraperitoneally (i.p.) to the mice before and after treatment with three different doses of (Et. O.s). The results indicated that the extract at different doses did not show significant (p ≥ 0.05) differences in (MNPCE), (PCE/NCE) ratios, and (CA) values. The higher doses sowed high (MI) values compared with untreated control group. MMC showed significant increase (p ≤ 0.001) in (MNPCE), (CA) and reduce (PCE/NCE) and (MI) values compared with untreated control group. Treatment with (Et. O.s) at different doses before and after MMC injection showed to modulate MNPCE, PCE/NCE ratios, CA and MI values in mice bone marrow cells suggesting genoprotective potential of this plant extract.
    MeSH terms: Ethanol/chemistry*; Animals; Bone Marrow Cells/drug effects*; Bone Marrow Cells/pathology; Dose-Response Relationship, Drug; Erythrocytes/drug effects*; Erythrocytes/pathology; Femur/drug effects*; Femur/pathology; Male; Phytotherapy; Mice, Inbred BALB C; Mutagens/toxicity*; Plant Extracts/isolation & purification; Plant Extracts/pharmacology*; Plants, Medicinal; Solvents/chemistry*; Micronucleus Tests; Antimutagenic Agents/isolation & purification; Antimutagenic Agents/pharmacology*; Mitomycin/toxicity*; Plant Leaves; Risk Assessment; Micronuclei, Chromosome-Defective/chemically induced*
  8. Khan F, Krishnan A, Ghani MA, Wickersham JA, Fu JJ, Lim SH, et al.
    Subst Use Misuse, 2018 01 28;53(2):249-259.
    PMID: 28635521 DOI: 10.1080/10826084.2016.1267217
    BACKGROUND: As part of an ongoing initiative by the Malaysian government to implement alternative approaches to involuntary detention of people who use drugs, the National Anti-Drug Agency has created new voluntary drug treatment programs known as Cure and Care (C&C) Centers that provide free access to addiction treatment services, including methadone maintenance therapy, integrated with social and health services.

    OBJECTIVES: We evaluated early treatment outcomes and client satisfaction among patients accessing C&C treatment and ancillary services at Malaysia's second C&C Center located in Kota Bharu, Kelantan.

    METHODS: In June-July 2012, a cross-sectional convenience survey of 96 C&C inpatients and outpatients who entered treatment >30 days previously was conducted to assess drug use, criminal justice experience, medical co-morbidities, motivation for seeking treatment, and attitudes towards the C&C. Drug use was compared for the 30-day-period before C&C entry and the 30-day-period before the interview.

    RESULTS: Self-reported drug use levels decreased significantly among both inpatient and outpatient clients after enrolling in C&C treatment. Higher levels of past drug use, lower levels of social support, and more severe mental health issues were reported by participants who were previously imprisoned. Self-reported satisfaction with C&C treatment services was high. Conclusions/Importance: Preliminary evidence of reduced drug use and high levels of client satisfaction among C&C clients provide support for Malaysia's ongoing transition from compulsory drug detention centers (CDDCs) to these voluntary drug treatment centers. If C&C centers are successful, Malaysia plans to gradually transition away from CDDCs entirely.
    MeSH terms: Adult; Ambulatory Care; Criminal Law; Cross-Sectional Studies; Humans; Malaysia; Male; Methadone/therapeutic use; Substance Abuse Treatment Centers; Treatment Outcome; Patient Satisfaction*; Outcome Assessment (Health Care)/statistics & numerical data*; Voluntary Programs*; Young Adult; Opiate Substitution Treatment*
  9. Wee SL, Abdul Munir MZ, Hee AKW
    Bull. Entomol. Res., 2018 Feb;108(1):116-124.
    PMID: 28625191 DOI: 10.1017/S0007485317000554
    The Artocarpus fruit fly, Bactrocera umbrosa (Fabricius) (Diptera: Tephritidae), is an oligophagous fruit pest infesting Moraceae fruits, including jackfruit (Artocarpus heterophyllus Lamarck), a fruit commodity of high value in Malaysia. The scarcity of fundamental biological, physiological and ecological information on this pest, particularly in relation to behavioural response to phytochemical lures, which are instrumental to the success of many area-wide fruit fly control and management programmes, underpins the need for studies on this much-underrated pest. The positive response of B. umbrosa males to methyl eugenol (ME), a highly potent phytochemical lure, which attracts mainly males of many Bactrocera species, was shown to increase with increasing age. As early as 7 days after emergence (DAE), ca. 22% of males had responded to ME and over 50% by 10 DAE, despite no occurrence of matings (i.e. the males were still sexually immature). Male attraction to ME peaked from 10 to 27 DAE, which corresponded with the flies' attainment of sexual maturity. In wind-tunnel assays during the dusk courtship period, ME-fed males exhibited earlier calling activity and attracted a significantly higher percentage of virgin females compared with ME-deprived males. ME-fed males enjoyed a higher mating success than ME-deprived males at 1-day post ME feeding in semi-field assays. ME consumption also promotes aggregation behaviour in B. umbrosa males, as demonstrated in wind-tunnel and semi-field assays. We suggest that ME plays a prominent role in promoting sexual communication and enhancing mating performance of the Artocarpus fruit fly, a finding that is congruent with previous reports on the consequences of ME acquisition by other economically important Bactrocera species.
    MeSH terms: Animals; Dose-Response Relationship, Drug; Eugenol/analogs & derivatives*; Eugenol/pharmacology; Feeding Behavior; Female; Male; Sexual Behavior, Animal/drug effects*; Sexual Maturation; Tephritidae/drug effects*
  10. Lim JJ, Ong YM, Wan Zalina MZ, Choo MM
    Ocul Immunol Inflamm, 2018;26(2):187-193.
    PMID: 28622058 DOI: 10.1080/09273948.2017.1327604
    MeSH terms: Acyclovir/therapeutic use; Aged; Antiviral Agents/therapeutic use; Cranial Nerve Diseases/diagnosis*; Cranial Nerve Diseases/drug therapy; Cranial Nerve Diseases/virology; Female; Glucocorticoids/therapeutic use; Herpes Zoster Ophthalmicus/diagnosis*; Herpes Zoster Ophthalmicus/drug therapy; Herpes Zoster Ophthalmicus/virology; Humans; Male; Optic Nerve Diseases/diagnosis; Optic Nerve Diseases/drug therapy; Optic Nerve Diseases/virology; Orbital Diseases/diagnosis*; Orbital Diseases/drug therapy; Orbital Diseases/virology; Prednisolone/therapeutic use; Eye Infections, Viral/diagnosis*; Eye Infections, Viral/drug therapy; Eye Infections, Viral/virology; Ocular Motility Disorders/diagnosis*; Ocular Motility Disorders/drug therapy; Ocular Motility Disorders/virology; Oculomotor Nerve Diseases/diagnosis; Oculomotor Nerve Diseases/drug therapy; Oculomotor Nerve Diseases/virology; Epithelium, Corneal/pathology; Trochlear Nerve Diseases/diagnosis; Trochlear Nerve Diseases/drug therapy; Trochlear Nerve Diseases/virology; Trigeminal Nerve Diseases/diagnosis; Trigeminal Nerve Diseases/drug therapy; Trigeminal Nerve Diseases/virology; Abducens Nerve Diseases/diagnosis; Abducens Nerve Diseases/drug therapy; Abducens Nerve Diseases/virology
  11. Ong HH, Khor FV, Balasupramaniam K, Say YH
    Psychol Health Med, 2018 Feb;23(2):160-170.
    PMID: 28610454 DOI: 10.1080/13548506.2017.1338737
    Three single nucleotide polymorphisms (SNPs) in alcohol-metabolizing genes - ADH1B (Arg47His), ADH1C (Ile350Val) and ALDH2 (Glu504Lys) have been extensively associated with flush reaction and alcoholism. Therefore, we investigated the association of these three SNPs with alcohol-induced reactions (AIRs), alcoholism risk, personality and anthropometric traits among Malaysian university students. AIRs, Self-Rating of the Effects of Alcohol (SRE) and Ten-Item Personality were surveyed, anthropometric measurements and DNA samples were taken. Among 264 valid drinkers (111 males, 153 females; 229 ethnic Chinese, 35 ethnic Indians), the minor allele frequencies for ADH1B, ADH1C, ALDH2 among Chinese/Indians were .45/.07, .33/.40, .32/.41, respectively; distribution of ADH1B alleles significantly different between ethnicities. Current/former experiences of flushing, hives, heart palpitations after alcohol consumption; and sleepiness, headache reactions, early and overall SRE were significantly different between ethnicities and genders, respectively. Overall SRE score was associated with ADH1C and ALDH2 alleles. 'Openness to Experiences' was associated with ALDH2 genotypes and alleles; Glu/Glu or Glu carriers showed significantly higher means. ADH1B Arg/Arg and Arg carriers showed significantly higher total body and subcutaneous fats but association was abolished after controlling for ethnicity. In conclusion, gender and ethnicity, but not alcohol-metabolizing gene variants, play a role in influencing the manifestation of AIRs.
    MeSH terms: Adipose Tissue*; Adult; Alcohol Dehydrogenase/genetics*; Aldehyde Dehydrogenase/genetics*; Female; Humans; Malaysia/ethnology; Male; Personality/genetics*; Risk Factors; Students*; Universities; Polymorphism, Single Nucleotide; Young Adult; Aldehyde Dehydrogenase, Mitochondrial/genetics
  12. Givehchi S, Wong YH, Yeong CH, Abdullah BJJ
    Minim Invasive Ther Allied Technol, 2018 Apr;27(2):81-89.
    PMID: 28612670 DOI: 10.1080/13645706.2017.1330757
    PURPOSE: To investigate the effect of radiofrequency ablation (RFA) electrode trajectory on complete tumor ablation using computational simulation.

    MATERIAL AND METHODS: The RFA of a spherical tumor of 2.0 cm diameter along with 0.5 cm clinical safety margin was simulated using Finite Element Analysis software. A total of 86 points inside one-eighth of the tumor volume along the axial, sagittal and coronal planes were selected as the target sites for electrode-tip placement. The angle of the electrode insertion in both craniocaudal and orbital planes ranged from -90° to +90° with 30° increment. The RFA electrode was simulated to pass through the target site at different angles in combination of both craniocaudal and orbital planes before being advanced to the edge of the tumor.

    RESULTS: Complete tumor ablation was observed whenever the electrode-tip penetrated through the epicenter of the tumor regardless of the angles of electrode insertion in both craniocaudal and orbital planes. Complete tumor ablation can also be achieved by placing the electrode-tip at several optimal sites and angles.

    CONCLUSIONS: Identification of the tumor epicenter on the central slice of the axial images is essential to enhance the success rate of complete tumor ablation during RFA procedures.

    MeSH terms: Computer Simulation*; Electrodes, Implanted; Liver/surgery*; Liver Neoplasms/surgery*; Models, Biological; Catheter Ablation/methods*; Finite Element Analysis
  13. Ling WC, Mustafa MR, Vanhoutte PM, Murugan DD
    Vascul Pharmacol, 2018 03;102:11-20.
    PMID: 28552746 DOI: 10.1016/j.vph.2017.05.003
    AIM: Endothelial dysfunction accompanied by an increase in oxidative stress is a key event leading to hypertension. As dietary nitrite has been reported to exert antihypertensive effect, the present study investigated whether chronic oral administration of sodium nitrite improves vascular function in conduit and resistance arteries of hypertensive animals with elevated oxidative stress.

    METHODS: Sodium nitrite (50mg/L) was given to angiotensin II-infused hypertensive C57BL/6J (eight to ten weeks old) mice for two weeks in the drinking water. Arterial systolic blood pressure was measured using the tail-cuff method. Vascular responsiveness of isolated aortae and renal arteries was studied in wire myographs. The level of nitrite in the plasma and the cyclic guanosine monophosphate (cGMP) content in the arterial wall were determined using commercially available kits. The production of reactive oxygen species (ROS) and the presence of proteins (nitrotyrosine, NOx-2 and NOx-4) involved in ROS generation were evaluated with dihydroethidium (DHE) fluorescence and by Western blotting, respectively.

    RESULTS: Chronic administration of sodium nitrite for two weeks to mice with angiotensin II-induced hypertension decreased systolic arterial blood pressure, reversed endothelial dysfunction, increased plasma nitrite level as well as vascular cGMP content. In addition, sodium nitrite treatment also decreased the elevated nitrotyrosine and NOx-4 protein level in angiotensin II-infused hypertensive mice.

    CONCLUSIONS: The present study demonstrates that chronic treatment of hypertensive mice with sodium nitrite improves impaired endothelium function in conduit and resistance vessels in addition to its antihypertensive effect, partly through inhibition of ROS production.

    MeSH terms: Administration, Oral; Angiotensin II*; Animals; Antihypertensive Agents/administration & dosage*; Antioxidants/administration & dosage*; Aorta, Thoracic/drug effects*; Aorta, Thoracic/metabolism; Aorta, Thoracic/physiopathology; Disease Models, Animal; Endothelium, Vascular/drug effects*; Endothelium, Vascular/metabolism; Endothelium, Vascular/physiopathology; Cyclic GMP/metabolism; Hypertension/chemically induced; Hypertension/metabolism; Hypertension/physiopathology; Hypertension/prevention & control*; Male; Mice, Inbred C57BL; Nitric Oxide/metabolism; Renal Artery/drug effects*; Renal Artery/metabolism; Renal Artery/physiopathology; Sodium Nitrite/administration & dosage*; Tyrosine/analogs & derivatives; Tyrosine/metabolism; Vasodilation/drug effects; Oxidative Stress/drug effects*; Arterial Pressure/drug effects*
  14. Jamaluddin N, Stuckey DC, Ariff AB, Faizal Wong FW
    Crit Rev Food Sci Nutr, 2018;58(14):2453-2465.
    PMID: 28609113 DOI: 10.1080/10408398.2017.1328658
    Bacteriocin is a proteinaceous biomolecule produced by bacteria (both Gram-positive and Gram-negative) that exhibits antimicrobial activity against closely related species, and food-borne pathogens. It has recently gained importance and attracted the attention of several researchers looking to produce it from various substrates and bacterial strains. This ushers in a new era of food preservation where the use of bacteriocin in food products will be an alternative to chemical preservatives, and heat treatment which are understood to cause unwanted side effects, and reduce sensory and nutritional quality. However, this new market depends on the success of novel downstream separation schemes from various types of crude feedstocks which are both effective and economic. This review focuses on the downstream separation of bacteriocin from various sources using both conventional and novel techniques. Finally, recommendations for future interesting areas of research that need to be pursued are highlighted.
    MeSH terms: Anti-Bacterial Agents/analysis; Anti-Bacterial Agents/pharmacology*; Bacteriocins/analysis; Bacteriocins/pharmacology*; Food Microbiology/methods*; Food Preservation/methods*; Food Preservatives/analysis; Food Preservatives/pharmacology*
  15. Cheok CY, Mohd Adzahan N, Abdul Rahman R, Zainal Abedin NH, Hussain N, Sulaiman R, et al.
    Crit Rev Food Sci Nutr, 2018 Feb 11;58(3):335-361.
    PMID: 27246698 DOI: 10.1080/10408398.2016.1176009
    Recent rapid growth of the world's population has increased food demands. This phenomenon poses a great challenge for food manufacturers in maximizing the existing food or plant resources. Nowadays, the recovery of health benefit bioactive compounds from fruit wastes is a research trend not only to help minimize the waste burden, but also to meet the intensive demand from the public for phenolic compounds which are believed to have protective effects against chronic diseases. This review is focused on polyphenolic compounds recovery from tropical fruit wastes and its current trend of utilization. The tropical fruit wastes include in discussion are durian (Durio zibethinus), mangosteen (Garcinia mangostana L.), rambutan (Nephelium lappaceum), mango (Mangifera indica L.), jackfruit (Artocarpus heterophyllus), papaya (Carica papaya), passion fruit (Passiflora edulis), dragon fruit (Hylocereus spp), and pineapple (Ananas comosus). Highlights of bioactive compounds in different parts of a tropical fruit are targeted primarily for food industries as pragmatic references to create novel innovative health enhancement food products. This information is intended to inspire further research ideas in areas that are still under-explored and for food processing manufacturers who would like to minimize wastes as the norm of present day industry (design) objective.
    MeSH terms: Fruit*; Industrial Waste/analysis*; Refuse Disposal*; Research; Recycling*
  16. Lee ZY, Noor Airini I, Barakatun-Nisak MY
    Clin Nutr, 2018 08;37(4):1264-1270.
    PMID: 28599979 DOI: 10.1016/j.clnu.2017.05.013
    BACKGROUND & AIMS: The effect of provision of full feeding or permissive underfeeding on mortality in mechanically ventilated critically ill patients in the intensive care unit (ICU) is still controversial. This study investigated the relationship of energy and protein intakes with 60-day mortality, and the extent to which ICU length of stay and nutritional risk status influenced this relationship.

    METHODS: This is a prospective observational study conducted among critically ill patients aged ≥18 years, intubated and mechanically ventilated within 48 h of ICU admission and stayed in the ICU for at least 72 h. Information on baseline characteristics and nutritional risk status (the modified Nutrition Risk in Critically ill [NUTRIC] score) was collected on day 1. Nutritional intake was recorded daily until death, discharge, or until the twelfth evaluable days. Mortality status was assessed on day 60 based on the patient's hospital record. Patients were divided into 3 groups a) received <2/3 of prescribed energy and protein (both <2/3), b) received ≥2/3 of prescribed energy and protein (both ≥2/3) and c) either energy or protein received were ≥2/3 of prescribed (either ≥2/3). The relationship between the three groups with 60-day mortality was examined by using logistic regression with adjustment for potential confounders. Sensitivity analysis was performed to examine the influence of ICU length of stay (≥7 days) and nutritional risk status.

    RESULTS: Data were collected from 154 mechanically ventilated patients (age, 51.3 ± 15.7 years; body mass index, 26.5 ± 6.7 kg/m2; 54% male). The mean modified NUTRIC score was 5.7 ± 1.9, with 56% of the patients at high nutritional risk. The patients received 64.5 ± 21.6% of the amount of energy and 56.4 ± 20.6% of the amount of protein prescribed. Provision of energy and protein at ≥2/3 compared with <2/3 of the prescribed amounts was associated with a trend towards increased 60-day mortality (Adjusted odds ratio [Adj OR] 2.23; 95% confidence interval [CI], 0.92-5.38; p = 0.074). No difference in mortality status was found between energy and protein provision at either ≥2/3 compared with <2/3 of the prescribed amounts (Adj OR 1.61, 95% CI, 0.58-4.45; p = 0.357). Nutritional risk status, not ICU length of stay, influenced the relationship between nutritional adequacy and 60-day mortality.

    CONCLUSIONS: Energy and protein adequacy of ≥2/3 of the prescribed amounts were associated with a trend towards increased 60-day mortality among mechanically ventilated critically ill patients. However, neither energy nor protein adequacy alone at ≥ or <2/3 adequacy affect 60-day mortality. Increased mortality was associated with provision of energy and protein at ≥2/3 of the prescribed amounts, which only affected patients with low nutritional risk.

    MeSH terms: Adult; Aged; Energy Intake/physiology*; Dietary Proteins*; Eating/physiology; Female; Humans; Male; Middle Aged; Nutritional Status/physiology*; Prospective Studies; Respiration, Artificial/mortality*; Critical Illness/mortality*
  17. Shehzad A, Bashir MJK, Horttanainen M, Manttari M, Havukainen J, Abbas G
    Environ Technol, 2018 Jul;39(14):1841-1850.
    PMID: 28595513 DOI: 10.1080/09593330.2017.1340350
    The present study explores the potential of MSW gasification for exergy analysis and has been recently given a premier attention in a region like Pakistan where the urbanization is rapidly growing and resources are few. The plant capacity was set at 50 MW based on reference data available and the total exergetic efficiency was recorded to be 31.5 MW. The largest irreversibility distribution appears in the gasifier followed by methanation unit and CO2 capture. The effect of process temperature, equivalence ratio and MSW moisture content was explored for inspecting the variations in syngas composition, lower heating value, carbon conversion efficiency and cold gas efficiency. Special attention of the paper is paid to the comparative assessment of MSW gasification products in four regions, namely Pakistan, USA, UAE and Thailand. This extended study gave an insight into the spectrum of socioeconomic conditions with varying MSW compositions in order to explain the effect of MSW composition variance on the gasification products.
    MeSH terms: Carbon; Gases; Models, Theoretical*; Pakistan; Refuse Disposal*; Temperature; Waste Management
  18. Siah KTH, Gong X, Yang XJ, Whitehead WE, Chen M, Hou X, et al.
    Gut, 2018 Jun;67(6):1071-1077.
    PMID: 28592440 DOI: 10.1136/gutjnl-2016-312852
    OBJECTIVE: Functional gastrointestinal disorders (FGIDs) are diagnosed by the presence of a characteristic set of symptoms. However, the current criteria-based diagnostic approach is to some extent subjective and largely derived from observations in English-speaking Western patients. We aimed to identify latent symptom clusters in Asian patients with FGID.

    DESIGN: 1805 consecutive unselected patients with FGID who presented for primary or secondary care to 11 centres across Asia completed a cultural and linguistic adaptation of the Rome III Diagnostic Questionnaire that was translated to the local languages. Principal components factor analysis with varimax rotation was used to identify symptom clusters.

    RESULTS: Nine symptom clusters were identified, consisting of two oesophageal factors (F6: globus, odynophagia and dysphagia; F9: chest pain and heartburn), two gastroduodenal factors (F5: bloating, fullness, belching and flatulence; F8 regurgitation, nausea and vomiting), three bowel factors (F2: abdominal pain and diarrhoea; F3: meal-related bowel symptoms; F7: upper abdominal pain and constipation) and two anorectal factors (F1: anorectal pain and constipation; F4: diarrhoea, urgency and incontinence).

    CONCLUSION: We found that the broad categorisation used both in clinical practice and in the Rome system, that is, broad anatomical divisions, and certain diagnoses with long historical records, that is, IBS with diarrhoea, and chronic constipation, are still valid in our Asian societies. In addition, we found a bowel symptom cluster with meal trigger and a gas cluster that suggests a different emphasis in our populations. Future studies to compare a non-Asian cohort and to match to putative pathophysiology will help to verify our findings.

    MeSH terms: Asia; Chest Pain; Constipation; Deglutition Disorders; Diarrhea; Eructation; Factor Analysis, Statistical; Flatulence; Heartburn; Humans; Language; Linguistics; Nausea; Surveys and Questionnaires; Rotation; Vomiting; Cohort Studies; Abdominal Pain; Irritable Bowel Syndrome; Secondary Care
  19. Rawal SY, Rawal YB
    Head Neck Pathol, 2018 Mar;12(1):123-126.
    PMID: 28589436 DOI: 10.1007/s12105-017-0827-9
    A 70-year-old male presented with a slow growing, dome shaped and painless mass of the hard palate. The mass was excised. Histopathological examination confirmed the diagnosis of a angioleiomyoma (vascular leiomyoma). A leiomyoma is an uncommon benign tumor of smooth muscle differentiation. True leiomyomas of the oral cavity are rare and most oral tumors are derived from the smooth muscle of walls of blood vessels. Therefore, they are called vascular leiomyomas or angioleiomyomas. Clinically, they may resemble a myriad other conditions both benign and malignant. A definitive diagnosis depends upon histopathological examination of the biopsied tissue in correlation with the tumor cell immunohistochemistry. Tumors are excised and recurrence is rare. The histopathological findings and differential diagnosis of a case of a palatal angioleiomyoma are discussed.
    MeSH terms: Aged; Humans; Male; Mouth Neoplasms/pathology*; Angiomyoma/pathology*; Palate, Hard/pathology
  20. Peirce K, Roberts P, Ali J, Coombes J, Matson P
    Hum Fertil (Camb), 2018 Sep;21(3):174-182.
    PMID: 28589740 DOI: 10.1080/14647273.2017.1334131
    Scientists working in assisted reproduction [members of Scientists in Reproductive Technology (SIRT) Australia, and subscribers of the online forums EmbryoMail and Quartec] were invited to complete an online questionnaire on the use of human blood products in assisted reproductive technologies (ART). A total of 260 started the questionnaire, with 208 (80%) completing it. A total of 62% of respondents had worked in human ART ≥8 years and 68% had post-graduate qualifications. The majority (82%) reported using products of animal or human origin, with 75% knowing why protein was added to culture media and 41% not worried by this. Almost half (49%) of respondents were unaware of regulations surrounding the use of human blood products in health care and 70% were unaware of adverse events involving human blood products in human ART. Most respondents (70%) indicated that they were not concerned about infections such as hepatitis, but agents such as prions were a cause for concern (57%). A total of 57% of respondents were unaware of alternatives, but 77% would use a suitable alternative. Using blood products in human ART is surrounded by a lack of awareness, often independent of respondents' qualifications or experience. A better understanding of these products and possible alternatives is required if informed decisions about their suitability are to be made.
    MeSH terms: Animals; Attitude of Health Personnel*; Australia/epidemiology; Cross Infection/etiology; Cross Infection/prevention & control*; Cross Infection/virology; Culture Media/adverse effects*; Culture Media/standards; Female; Hepatitis/etiology; Hepatitis/epidemiology; Hepatitis/prevention & control; Humans; Health Knowledge, Attitudes, Practice*; Male; Risk; Culture Media, Serum-Free/adverse effects; Culture Media, Serum-Free/standards; Medical Laboratory Personnel/education; Prion Diseases/etiology; Prion Diseases/epidemiology; Prion Diseases/prevention & control; Prion Diseases/transmission; Health Care Surveys; Needs Assessment; Internet; Reproductive Techniques, Assisted/adverse effects*; Reproductive Techniques, Assisted/standards; Biomedical Research/manpower
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