Displaying publications 1 - 20 of 52 in total

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  1. Chatenet M, Delage C, Ripolles M, Irey M, Lockhart BEL, Rott P
    Plant Dis, 2001 Nov;85(11):1177-1180.
    PMID: 30823163 DOI: 10.1094/PDIS.2001.85.11.1177
    Sugarcane yellow leaf virus (SCYLV) was detected for the first time in 1996 in the Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD) sugarcane quarantine at Montpellier by reverse transcription-polymerase chain reaction (RT-PCR) in varieties from Brazil, Florida, Mauritius, and Réunion. Between 1997 and 2000, the virus was found by RT-PCR and/or tissue-blot immunoassay (TBIA) in additional varieties from Barbados, Cuba, Guadeloupe, Indonesia, Malaysia, Philippines, Puerto Rico, and Taiwan, suggesting a worldwide distribution of the pathogen. An excellent correlation was observed between results obtained for the two diagnostic techniques. However, even though only a few false negative results were obtained by either technique, both are now used to detect SCYLV in CIRAD's sugarcane quarantine in Montpellier. The pathogen was detected by TBIA or RT-PCR in all leaves of sugarcane foliage, but the highest percentage of infected vascular bundles was found in the top leaves. The long hot water treatment (soaking of cuttings in water at 25°C for 2 days and then at 50°C for 3 h) was ineffective in eliminating SCYLV from infected plants. Sugarcane varieties from various origins were grown in vitro by apical bud culture and apical meristem culture, and the latter proved to be the most effective method for producing SCYLV-free plants.
    Matched MeSH terms: Saccharum
  2. Saiful Azhar, S., Suhardy, D., Kasim, F.H., Nazry Saleh, M.
    MyJurnal
    The amount of sugarcane bagasse and rice straw in the state of Perlis (Malaysia) is abundant while its utilization is still limited. One of the alternatives for the bagasse and straw utilization is as pulp raw material. This paper reviews on pulp from sugarcane bagasse and rice straw and its suitability for paper production. In this study, the pulp was extracted by the Soxhlet extraction method. The objective of this study was to investigate the cellulose, lignin and silica content of the pulp from sugarcane bagasse and rice straw. For rice straw, the presence of large amount of pentosanes in the pulp and black liquors, which also contain silica were decreased the using of straw in the paper industry. Therefore, formic acid pulping and NaOH treatment are studied to reduce or prevent silica. The isolated pulp samples were further characterized by Scanning Electron Microscope (SEM) to investigate their fiber dimensions.
    Matched MeSH terms: Saccharum
  3. Wan Ngah WS, Hanafiah MA
    Bioresour Technol, 2008 Jul;99(10):3935-48.
    PMID: 17681755
    The application of low-cost adsorbents obtained from plant wastes as a replacement for costly conventional methods of removing heavy metal ions from wastewater has been reviewed. It is well known that cellulosic waste materials can be obtained and employed as cheap adsorbents and their performance to remove heavy metal ions can be affected upon chemical treatment. In general, chemically modified plant wastes exhibit higher adsorption capacities than unmodified forms. Numerous chemicals have been used for modifications which include mineral and organic acids, bases, oxidizing agent, organic compounds, etc. In this review, an extensive list of plant wastes as adsorbents including rice husks, spent grain, sawdust, sugarcane bagasse, fruit wastes, weeds and others has been compiled. Some of the treated adsorbents show good adsorption capacities for Cd, Cu, Pb, Zn and Ni.
    Matched MeSH terms: Saccharum
  4. Jiang J, Ridley AW, Tang H, Croft BJ, Johnson KN
    Arch Virol, 2008;153(5):839-48.
    PMID: 18299794 DOI: 10.1007/s00705-008-0058-1
    Fiji leaf gall is an important disease of sugarcane in Australia and other Asia-Pacific countries. The causative agent is the reovirus Fiji disease virus (FDV). Previous reports indicate that there is variation in pathology between virus isolates. To investigate the amount of genetic variation found in FDV, 25 field isolates from Australia, Papua New Guinea and Malaysia were analysed by partial sequencing of genome segments S3 and S9. There was up to 15% divergence in the nucleotide sequence among the 25 isolates. A similar amount of divergence and pattern of relationships was found for each of the two genomic segments for most of the field isolates, although reassortment of genome segments seems likely for at least one of the Papua New Guinean isolates. The finding of a high level of variation in FDV isolated in different regions has implications for quarantine and disease management.
    Matched MeSH terms: Saccharum/virology
  5. Chong KF, Lee CY
    J Econ Entomol, 2009 Aug;102(4):1586-90.
    PMID: 19736772
    An evaluation of several insecticides, namely, 0.01% fipronil, 0.05% indoxacarb, and 2% boric acid in liquid bait formulations were carried out against field populations of the longlegged ant, Anoplolepis gracilipes (Fr. Smith) (Hymenoptera: Formicidae). The baits were formulated in brown cane sugar solution (50%, wt:wt) and placed in an experimental bait station. Each bait was evaluated against populations of A. gracilipes at four buildings. Fipronil, indoxacarb, and boric acid were effective against A. gracilipes, with > 90% reduction of workers within 3 d posttreatment. Total reduction (100%) was achieved within 7 d for fipronil, 14 d for indoxacarb, and 56 d for boric acid. The performance of fipronil and indoxacarb baits did not differ significantly (P > 0.05) in all postbaiting sampling intervals. Reduction of A. gracilipes resulted in an increase in other ant species [Monomorium pharaonis (L.), Monomorium floricola (Jerdon), Monomorium orientale Mayr, Monomorium destructor (Jerdon), Tapinoma indicum Forel, Pheidole sp., and Camponotus sp.] at the baited locations.
    Matched MeSH terms: Saccharum
  6. Ahmad Zakuan Ahmad Azmi, Mohd. Saaid, Irawan, Sonny
    MyJurnal
    The present project investigated the potential of utilizing corncobs and sugar cane waste as viscosivier in drilling fluid. For this purpose, the synthetic-based drilling fluid, Sarapar 147, was used as the base fluid. Both the materials were subjected to pre-treatment of drying, dehumidifying, grinding and sieving process prior to rheological tests. The rheological tests were conducted in accordance with the API 13B specifications to measure mud density, plastic viscosity, yield point, 10-second and 10-minute gel strength. The study found that plastic viscosity and yield point had a direct relationship with the amount of materials added. To drill fluid additive with corn cobs, the density, plastic viscosity and yield point were increased when the amount of additives were increased. Based on these experiments, both additives were found to have the potential to be used as additive in drilling fluid. In particular, they were able to improve its rheological properties by increasing the density, plastic viscosity and yield point. The suitable concentration for the corn cobs and sugar cane is 6.45 lb/bbl and 9.43 lb/bbl, respectively.
    Matched MeSH terms: Saccharum
  7. Zakaria L, Hsuan HM, Salleh B
    Trop Life Sci Res, 2011 Dec;22(2):93-101.
    PMID: 24575220
    Mating studies were conducted on 78 isolates of Fusarium species section Liseola from rice, sugarcane and maize. From the crosses with tester strains of Gibberella fujikuroi species complex, 64.1% (50 out of 78 isolates) were cross-fertile with tester strains of mating populations A to E. The results of the mating studies showed that of the 50 isolates, 19 belonged to mating population A (Gibberella moniliformis), 18 to mating population B (Gibberella sacchari), 4 to mating population E (Gibberella subglutinans), 6 to mating population D (Gibberella intermedia) and 3 to mating population C (G. fujikuroi). Identification of several mating populations from rice, sugarcane and maize could be important biological entities under field conditions.
    Matched MeSH terms: Saccharum
  8. Latiffah Zakaria, Heng Mei Hsuan, Baharuddin Salleh
    Trop Life Sci Res, 2011;22(2):93-101.
    MyJurnal
    Mating studies were conducted on 78 isolates of Fusarium species section Liseola from rice, sugarcane and maize. From the crosses with tester strains of Gibberella fujikuroi species complex, 64.1% (50 out of 78 isolates) were cross-fertile with tester strains of mating populations A to E. The results of the mating studies showed that of the 50 isolates, 19 belonged to mating population A (Gibberella moniliformis), 18 to mating population B (Gibberella sacchari), 4 to mating population E (Gibberella subglutinans), 6 to mating population D (Gibberella intermedia) and 3 to mating population C (G. fujikuroi). Identification of several mating populations from rice,sugarcane and maize could be important biological entities under field conditions.
    Matched MeSH terms: Saccharum
  9. Hsuan HM, Salleh B, Zakaria L
    Int J Mol Sci, 2011;12(10):6722-32.
    PMID: 22072914 DOI: 10.3390/ijms12106722
    The objective of this study was to identify Fusarium species in the Gibberella fujikuroi species complex from rice, sugarcane and maize as most of the Fusarium species in the species complex are found on the three crops. Isolates used were collected from the field and obtained from culture collection. The Fusarium isolates were initially sorted based on morphology and identifications confirmed based on the DNA sequence of the translation elongation factor 1-α (TEF-1α) gene. Based on the closest match of BLAST analysis, five species were recovered, namely, F. sacchari, F. fujikuroi, F. proliferatum, F. andiyazi and F. verticillioides. This is the first report regarding F. andiyazi from rice in Malaysia and Southeast Asia. The phylogenetic tree generated by using the neighbor joining method showed that isolates from the same species were grouped in the same clade. The present study indicated that Fusarium species in the G. fujikuroi species complex are widespread in rice, sugarcane and maize in Peninsular Malaysia. The findings also suggest that the use of morphological characters for identification of Fusarium species in the G. fujikuroi species complex from the three crops will lead to incorrect species designation.
    Matched MeSH terms: Saccharum/classification; Saccharum/genetics
  10. Sanagi MM, Abbas HH, Ibrahim WA, Aboul-Enien HY
    Food Chem, 2012 Jul 15;133(2):557-62.
    PMID: 25683433 DOI: 10.1016/j.foodchem.2012.01.036
    Dispersive liquid-liquid microextraction method based on solidification of floating organic droplet (DLLME-SFO) was developed for the analysis of triazines. As model compounds four selected triazine herbicides namely, simazine, atrazine, secbumeton and cyanazine were employed to estimate the extraction efficiency. The experimental conditions were comprehensively studied for the DLLME-SFO method. Under the use of 10 μL of 1-undecanol as extraction solvent, 100 μL of acetonitrile as disperser solvent and 5% (w/v) NaCl for 3 min the results demonstrated that the repeatability (RSD%) of the optimised DLLME-SFO method ranged from 0.03% to 5.1% and the linearity in the range of 0.01-100 ppb. Low limits of detection (0.037-0.008 ppb), and good enrichment factors (195-322) were obtained. The DLLME-SFO method applied in water and sugarcane samples showed excellent relative recoveries (95.7-116.9%) with RSDs <8.6% (n=3) for all samples.
    Matched MeSH terms: Saccharum/chemistry*
  11. Gan HM, McGroty SE, Chew TH, Chan KG, Buckley LJ, Savka MA, et al.
    J Bacteriol, 2012 Nov;194(21):5981-2.
    PMID: 23045495 DOI: 10.1128/JB.01469-12
    Enterobacter sp. strain SST3 is an endophytic bacterium isolated from Saccharum spp. Here we present its annotated draft genome that may shed light on its role as a bacterial endophyte of sugarcane. To our knowledge, this is the first genome announcement of a sugarcane-associated bacterium from the genus Enterobacter.
    Matched MeSH terms: Saccharum/microbiology
  12. Heng MH, Baharuddin S, Latiffah Z
    Genet. Mol. Res., 2012;11(1):383-92.
    PMID: 22370941 DOI: 10.4238/2012.February.16.4
    Fusarium species section Liseola namely F. fujikuroi, F. proliferatum, F. andiyazi, F. verticillioides, and F. sacchari are well-known plant pathogens on rice, sugarcane and maize. In the present study, restriction analysis of the intergenic spacer regions (IGS) was used to characterize the five Fusarium species isolated from rice, sugarcane and maize collected from various locations in Peninsular Malaysia. From the analysis, and based on restriction patterns generated by the six restriction enzymes, Bsu151, BsuRI, EcoRI, Hin6I, HinfI, and MspI, 53 haplotypes were recorded among 74 isolates. HinfI showed the most variable restriction patterns (with 11 patterns), while EcoRI showed only three patterns. Although a high level of variation was observed, it was possible to characterize closely related species and isolates from different species. UPGMA cluster analysis showed that the isolates of Fusarium from the same species were grouped together regardless of the hosts. We conclude that restriction analysis of the IGS regions can be used to characterize Fusarium species section Liseola and to discriminate closely related species as well as to clarify their taxonomic position.
    Matched MeSH terms: Saccharum/microbiology
  13. Ali N, El-Harbawi M, Jabal AA, Yin CY
    Environ Technol, 2012 Feb-Mar;33(4-6):481-6.
    PMID: 22629620
    The characteristics and water/oil sorption effectiveness ofkapok fibre, sugarcane bagasse and rice husks have been compared. The three biomass types were subjected to field emission scanning electron microscopy-energy dispersive X-ray spectroscopy and surface tension analyses for liquid-air and oil-water systems were conducted. Both kapok fibre and sugarcane bagasse exhibit excellent oil sorption capabilities for diesel, crude, new engine and used engine oils as their oil sorption capacities all exceed 10 g/g. The synthetic sorbent exhibits oil sorption capacities comparable with sugarcane bagasse, while rice husks exhibit the lowest oil sorption capacities among all the sorbents. Kapok fibre shows overwhelmingly high oil-to-water sorption (O/W) ratios ranging from 19.35 to 201.53 while sugarcane bagasse, rice husks and synthetic sorbent have significantly lower O/W ratios (0.76-2.69). This suggests that kapok fibre is a highly effective oil sorbent even in well-mixed oil-water media. An oil sorbent suitability matrix is proposed to aid stakeholders in evaluating customized oil removal usage of the natural sorbents.
    Matched MeSH terms: Saccharum/chemistry*
  14. Subari N, Mohamad Saleh J, Md Shakaff AY, Zakaria A
    Sensors (Basel), 2012;12(10):14022-40.
    PMID: 23202033 DOI: 10.3390/s121014022
    This paper presents a comparison between data from single modality and fusion methods to classify Tualang honey as pure or adulterated using Linear Discriminant Analysis (LDA) and Principal Component Analysis (PCA) statistical classification approaches. Ten different brands of certified pure Tualang honey were obtained throughout peninsular Malaysia and Sumatera, Indonesia. Various concentrations of two types of sugar solution (beet and cane sugar) were used in this investigation to create honey samples of 20%, 40%, 60% and 80% adulteration concentrations. Honey data extracted from an electronic nose (e-nose) and Fourier Transform Infrared Spectroscopy (FTIR) were gathered, analyzed and compared based on fusion methods. Visual observation of classification plots revealed that the PCA approach able to distinct pure and adulterated honey samples better than the LDA technique. Overall, the validated classification results based on FTIR data (88.0%) gave higher classification accuracy than e-nose data (76.5%) using the LDA technique. Honey classification based on normalized low-level and intermediate-level FTIR and e-nose fusion data scored classification accuracies of 92.2% and 88.7%, respectively using the Stepwise LDA method. The results suggested that pure and adulterated honey samples were better classified using FTIR and e-nose fusion data than single modality data.
    Matched MeSH terms: Saccharum/chemistry
  15. Foo KY, Lee LK, Hameed BH
    Bioresour Technol, 2013 Apr;134:166-72.
    PMID: 23500574 DOI: 10.1016/j.biortech.2013.01.139
    This study evaluates the sugarcane bagasse derived activated carbon (SBAC) prepared by microwave heating for the adsorptive removal of ammonical nitrogen and orthophosphate from the semi-aerobic landfill leachate. The physical and chemical properties of SBAC were examined by pore structural analysis, scanning electron microscopy, Fourier transform infrared spectroscopy and elemental analysis. The effects of adsorbent dosage, contact time and solution pH on the adsorption performance were investigated in a batch mode study at 30°C. Equilibrium data were favorably described by the Langmuir isotherm model, with a maximum monolayer adsorption capacity for ammonical nitrogen and orthophosphate of 138.46 and 12.81 mg/g, respectively, while the adsorption kinetic was best fitted to the pseudo-second-order kinetic model. The results illustrated the potential of sugarcane bagasse derived activated carbon for the adsorptive treatment of semi-aerobic landfill leachate.
    Matched MeSH terms: Saccharum/chemistry*
  16. Yoon LW, Ngoh GC, Chua AS
    Enzyme Microb Technol, 2013 Sep 10;53(4):250-6.
    PMID: 23931690 DOI: 10.1016/j.enzmictec.2013.05.005
    This study examined the potential of untreated and alkali-pretreated sugarcane bagasse (SCB) in cellulase, reducing sugar (RS) and fungal biomass production via solid state fermentation (SSF) using Pycnoporus sanguineus. The impact of the composition, structure and cellulase adsorption ability of SCB on the production of cellulase, RS and fungal biomass was investigated. From the morphological and compositional analyses, untreated SCB has relatively more structural changes with a higher percentage of depolymerisation on the cellulose, hemicellulose and lignin content compared to alkali-pretreated SCB. Thus, untreated SCB favoured the production of cellulase and fungal biomass whereas alkali-pretreated SCB yielded a higher amount of RS. The composition and morphology of untreated SCB did not encourage RS production and this suggested that RS produced during SSF might be consumed in a faster rate by the more abundantly grown fungus. Besides that, alkali-pretreated SCB with higher cellulase adsorption ability could have adsorbed the cellulase produced and resulted in a lower cellulase titre. In short, the production of specific bioproducts via SSF is dependent on the structure and composition of the substrate applied.
    Matched MeSH terms: Saccharum/metabolism*; Saccharum/ultrastructure; Saccharum/chemistry
  17. Kalhori N, Nulit R, Go R
    Protein J, 2013 Oct;32(7):551-9.
    PMID: 24132392 DOI: 10.1007/s10930-013-9516-z
    Pentose phosphate pathway (PPP) composed of two functionally-connected phases, the oxidative and non-oxidative phase. Both phases catalysed by a series of enzymes. Transketolase is one of key enzymes of non-oxidative phase in which transfer two carbon units from fructose-6-phosphate to erythrose-4-phosphate and convert glyceraldehyde-3-phosphate to xylulose-5-phosphate. In plant, erythrose-4-phosphate enters the shikimate pathway which is produces many secondary metabolites such as aromatic amino acids, flavonoids, lignin. Although transketolase in plant system is important, study of this enzyme is still limited. Until to date, TKT genes had been isolated only from seven plants species, thus, the aim of present study to isolate, study the similarity and phylogeny of transketolase from sugarcane. Unlike bacteria, fungal and animal, PPP is complete in the cytosol and all enzymes are found cytosolic. However, in plant, the oxidative phase found localised in the cytosol but the sub localisation for non-oxidative phase might be restricted to plastid. Thus, this study was conducted to determine subcellular localization of sugarcane transketolase. The isolation of sugarcane TKT was done by reverse transcription polymerase chain reaction, followed by cloning into pJET1.2 vector and sequencing. This study has isolated 2,327 bp length of sugarcane TKT. The molecular phylogenetic tree analysis found that transketolase from sugarcane and Zea mays in one group. Classification analysis found that both plants showed closer relationship due to both plants in the same taxon i.e. family Poaceae. Target P 1.1 and Chloro P predicted that the compartmentation of sugarcane transketolase is localised in the chloroplast which is 85 amino acids are plant plastid target sequence. This led to conclusion that the PPP is incomplete in the cytosol of sugarcane. This study also found that the similarity sequence of sugarcane TKT closely related with the taxonomy plants.
    Matched MeSH terms: Saccharum/classification; Saccharum/enzymology*; Saccharum/genetics
  18. Ezebor F, Khairuddean M, Abdullah AZ, Boey PL
    Bioresour Technol, 2014 Apr;157:254-62.
    PMID: 24561631 DOI: 10.1016/j.biortech.2014.01.110
    The use of pseudo-infinite methanol in increasing the rate of esterification and transesterification reactions was studied using oil palm trunk (OPT) and sugarcane bagasse (SCB) derived solid acid catalysts. The catalysts were prepared by incomplete carbonisation at 400°C for 8h, followed by sulfonation at 150°C for 15h and characterised using TGA/DTA, XRD, FT-IR, SEM-EDS, EA and titrimetric determinations of acid sites. Under optimal reaction conditions, the process demonstrated rapid esterification of palmitic acid, with FAME yields of 93% and 94% in 45min for OPT and SCB catalysts, respectively. With the process, moisture levels up to 16.7% accelerated the conversion of low FFA oils by sulfonated carbon catalysts, through moisture-induced violent bumping. Moisture assisted transesterification of palm olein containing 1.78% FFA and 8.33% added water gave FAME yield of 90% in 10h, which was two folds over neat oil.
    Matched MeSH terms: Saccharum/chemistry*
  19. Doni F, Isahak A, Che Mohd Zain CR, Mohd Ariffin S, Wan Mohamad WN, Wan Yusoff WM
    Springerplus, 2014;3:532.
    PMID: 25279323 DOI: 10.1186/2193-1801-3-532
    BACKGROUND: Trichoderma sp. SL2 has been previously reported to enhance rice germination, vigour, growth and physiological characteristics. The use of Potato Dextrose Agar as carrier of Trichoderma sp. SL2 inoculant is not practical for field application due to its short shelf life and high cost. This study focuses on the use of corn and sugarcane bagasse as potential carriers for Trichoderma sp. SL2 inoculants.

    FINDINGS: A completely randomized design was applied for this study. Trichoderma sp. SL2 suspension mixed with corn and sugarcane bagasse were used as treatment mixture in soil. Growth parameters including rice seedling height, root length, wet weight, leaf number and biomass were measured and compared to control. The results showed that Trichoderma sp. SL2 mixed with corn significantly enhanced rice seedlings root length, wet weight and biomass compared to Trichoderma sp. SL2 mixed with sugarcane bagasse and control.

    CONCLUSION: Corn can be a potential carrier for Trichoderma spp. inoculants for field application.

    Matched MeSH terms: Saccharum
  20. Liew, E. W. T.
    MyJurnal
    Current ethanol production processes utilizing crops such as sugar cane and corn starch have been well established over the decade. Other crop such as cassava is a potential candidate in producing ethanol. However, thermal processes are required to hydrolyze starch for the production of fermentable sugars. The processes are energy intensive and could lead to undesirable by-products generation. In this work, the hydrolysis of cassava starch is studied following an experimental design as a statistical problem solving approach. Central composite design (CCD) is used in order to select the most important variables from the simultaneous study on the effect and influence of operating conditions of bioreactor utilized, namely, pH, temperature and substrate concentration, as well as to optimize the process of cassava starch hydrolysis. From the results obtained, it can be concluded that the cassava starch hydrolysis is enhanced by pH and temperature. Model validations show good agreement between experimental results and the predicted responses.
    Matched MeSH terms: Saccharum
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