Displaying publications 381 - 400 of 1099 in total

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  1. Characterization of Matured Vermicompost Derived from Valorization of Palm Oil Mill Byproduct
    Lim SL, Wu TY
    J Agric Food Chem, 2016 Mar 2;64(8):1761-9.
    PMID: 26844586 DOI: 10.1021/acs.jafc.6b00531
    The valorization process involves transforming low-value materials such as wastes into high-value-added products. The current study aims to determine the potential of using a valorization process such as vermicomposting technology to convert palm oil mill byproduct, namely, decanter cake (DC), into organic fertilizer or vermicompost. The maturity of the vermicompost was characterized through various chemical and instrumental characterization to ensure the end product was safe and beneficial for agricultural application. The vermicomposting of DC showed significantly higher nutrient recovery and decreases in C:N ratio in comparison with the controls, particularly in the treatment with 2 parts DC and 1 part rice straw (w/w) (2DC:1RS). 2DC:1RS vermicompost had a final C:N ratio of 9.03 ± 0.12 and reasonably high levels of calcium (1.13 ± 0.05 g/kg), potassium (25.47 ± 0.32 g/kg), magnesium (4.87 ± 0.19 g/kg), sodium (7.40 ± 0.03 g/kg), and phosphorus (3.62 ± 0.27 g/kg). In addition, instrumental characterization also revealed a higher degree of maturity in the vermicompost. Ratios of 2921:1633 and DTG2:DTG3 also showed significant linear correlations with the C:N ratio, implying that those ratios could be used to characterize the progression of vermicompost maturity during the valorization process of DC.
    Matched MeSH terms: Soil/chemistry*
  2. Fulltext Detection of Helminth Eggs and Identification of Hookworm Species in Stray Cats, Dogs and Soil from Klang Valley, Malaysia
    Tun S, Ithoi I, Mahmud R, Samsudin NI, Kek Heng C, Ling LY
    PLoS One, 2015;10(12):e0142231.
    PMID: 26671680 DOI: 10.1371/journal.pone.0142231
    The present study was conducted to determine the prevalence of helminth eggs excreted in the faeces of stray cats, dogs and in soil samples. A total of 505 fresh samples of faeces (from 227 dogs and 152 cats) and soil were collected. The egg stage was detected via microscopy after the application of formalin-ether concentration technique. Genomic DNA was extracted from the samples containing hookworm eggs and used for further identification to the species level using real-time polymerase chain reaction coupled with high resolution melting analysis. Microscopic observation showed that the overall prevalence of helminth eggs among stray cats and dogs was 75.7% (95% CI = 71.2%-79.9%), in which 87.7% of dogs and 57.9% of cats were infected with at least one parasite genus. Five genera of heliminth eggs were detected in the faecal samples, including hookworms (46.4%), Toxocara (11.1%), Trichuris (8.4%), Spirometra (7.4%) and Ascaris (2.4%). The prevalence of helminth infections among stray dogs was significantly higher than that among stray cats (p < 0.001). Only three genera of helminths were detected in soil samples with the prevalence of 23% (95% CI = 15.1%-31%), consisting of hookworms (16.6%), Ascaris (4%) and Toxocara (2.4%). The molecular identification of hookworm species revealed that Ancylostoma ceylanicum was dominant in both faecal and soil samples. The dog hookworm, Ancylostoma caninum, was also detected among cats, which is the first such occurrence reported in Malaysia till date. This finding indicated that there was a cross-infection of A. caninum between stray cats and dogs because of their coexistent within human communities. Taken together, these data suggest the potential role of stray cats and dogs as being the main sources of environmental contamination as well as for human infections.
    Matched MeSH terms: Soil/parasitology*
  3. Fulltext The impact of disturbed peatlands on river outgassing in Southeast Asia
    Wit F, Müller D, Baum A, Warneke T, Pranowo WS, Müller M, et al.
    Nat Commun, 2015;6:10155.
    PMID: 26670925 DOI: 10.1038/ncomms10155
    River outgassing has proven to be an integral part of the carbon cycle. In Southeast Asia, river outgassing quantities are uncertain due to lack of measured data. Here we investigate six rivers in Indonesia and Malaysia, during five expeditions. CO2 fluxes from Southeast Asian rivers amount to 66.9 ± 15.7 Tg C per year, of which Indonesia releases 53.9 ± 12.4 Tg C per year. Malaysian rivers emit 6.2 ± 1.6 Tg C per year. These moderate values show that Southeast Asia is not the river outgassing hotspot as would be expected from the carbon-enriched peat soils. This is due to the relatively short residence time of dissolved organic carbon (DOC) in the river, as the peatlands, being the primary source of DOC, are located near the coast. Limitation of bacterial production, due to low pH, oxygen depletion or the refractory nature of DOC, potentially also contributes to moderate CO2 fluxes as this decelerates decomposition.
    Matched MeSH terms: Soil*
  4. Oil palm (Elaeis guineensis) plantation on tropical peatland in South East Asia: Photosynthetic response to soil drainage level for mitigation of soil carbon emissions
    McCalmont J, Kho LK, Teh YA, Chocholek M, Rumpang E, Rowland L, et al.
    Sci Total Environ, 2023 Feb 01;858(Pt 1):159356.
    PMID: 36270353 DOI: 10.1016/j.scitotenv.2022.159356
    While existing moratoria in Indonesia and Malaysia should preclude continued large-scale expansion of palm oil production into new areas of South-East Asian tropical peatland, existing plantations in the region remain a globally significant source of atmospheric carbon due to drainage driven decomposition of peatland soils. Previous studies have made clear the direct link between drainage depth and peat carbon decomposition and significant reductions in the emission rate of CO2 can be made by raising water tables nearer to the soil surface. However, the impact of such changes on palm fruit yield is not well understood and will be a critical consideration for plantation managers. Here we take advantage of very high frequency, long-term monitoring of canopy-scale carbon exchange at a mature oil palm plantation in Malaysian Borneo to investigate the relationship between drainage level and photosynthetic uptake and consider the confounding effects of light quality and atmospheric vapour pressure deficit. Canopy modelling from our dataset demonstrated that palms were exerting significantly greater stomatal control at deeper water table depths (WTD) and the optimum WTD for photosynthesis was found to be between 0.3 and 0.4 m below the soil surface. Raising WTD to this level, from the industry typical drainage level of 0.6 m, could increase photosynthetic uptake by 3.6 % and reduce soil surface emission of CO2 by 11 %. Our study site further showed that despite being poorly drained compared to other planting blocks at the same plantation, monthly fruit bunch yield was, on average, 14 % greater. While these results are encouraging, and at least suggest that raising WTD closer to the soil surface to reduce emissions is unlikely to produce significant yield penalties, our results are limited to a single study site and more work is urgently needed to confirm these results at other plantations.
    Matched MeSH terms: Soil*
  5. Analysis on the changes of fertilization intensity and efficiency in China's grain production from 1980 to 2019
    Liu Q, Wu TY, Tu W, Pu L
    J Sci Food Agric, 2023 Jan 30;103(2):908-916.
    PMID: 36067269 DOI: 10.1002/jsfa.12202
    BACKGROUND: Relieving serious non-point source pollution of nitrogen (N), phosphorus (P), and potassium (K) is an urgent task in China. It is necessary to explore the changing characteristics of chemical fertilization intensity (FI) and efficiency to provide references. A new method of 'relative productivity proportion weight', which was simpler than data envelope analysis, was proposed to construct models of fertilizer allocation efficiency (FAE) and chemical fertilizer integrated efficiency (FIE) by considering NPK multi-inputs and the grain output scale, respectively.

    RESULTS: During 1980-2014, the FIs of NPK chemical fertilizers in China showed a significant growing trend. After reaching the highest value of 339 kg ha-1 in 2014, FIs were reduced to 303 kg ha-1 in 2019, higher than the 225 kg ha-1 maximum safe usage internationally recognized. Meanwhile, the pattern of change of FAE was one of 'decreasing to increasing', with values of 1 in 1980, 0.66 in 2003, and 0.80 in 2019. FIE basically showed an increasing trend, which could be divided into three stages: the first stage of low efficiency during 1980-2009, the second stage of medium efficiency after 2010, and the third stage of high efficiency after 2018.

    CONCLUSION: From 1980 until 2019, a reduction of FAE from 1 to 0.80 with an average of 0.75 was observed in China. FIE was found between 0.65 and 0.85 and had the potential of upgrading by 15-35%. Therefore, China needs to improve the fertilizer use efficiency in order to strive for negative growth of chemical fertilizer intensity and ecological agriculture construction. © 2022 Society of Chemical Industry.

    Matched MeSH terms: Soil*
  6. Comparative analysis of root associated microbes in tropical cultivated and weedy rice (Oryza spp.) and temperate cultivated rice
    Juliyanti V, Itakura R, Kotani K, Lim SY, Suzuki G, Chong CW, et al.
    Sci Rep, 2024 Apr 26;14(1):9656.
    PMID: 38671238 DOI: 10.1038/s41598-024-60384-0
    Weedy rice is a major problem in paddy fields around the world. It is well known that weedy rice appears to grow faster and mature earlier than cultivated rice. It is possible that differences in the root microbial genetics are correlated with this characteristic. This study incorporated 16S rRNA amplicon sequencing to study the microbial composition in the rhizosphere and endosphere of rice root. No significant difference was found between the microbiota associated with weedy and cultivated rice lines grown in the same field. It was found that the endosphere had less microbial diversity compared to the rhizosphere. The major groups of bacteria found in the endosphere are from the phylum Proteobacteria, Myxococcota, Chloroflexota, and Actinobacteria. In addition, by analyzing the microbiome of japonica rice grown in the field in a temperate climate, we found that despite differences in genotype and location, some bacterial taxa were found to be common and these members of the putative rice core microbiome can also be detected by in situ hybridization. The delineation of a core microbiome in the endosphere of rice suggests that these bacterial taxa might be important in the life cycle of a wide range of rice types.
    Matched MeSH terms: Soil Microbiology*
  7. Toxicity assessment of heavy metals translocation in maize grown in the Ganges delta floodplain soils around the Payra power plant in Bangladesh
    Islam MS, Al Bakky A, Ahmed S, Islam MT, Antu UB, Saikat MSM, et al.
    Food Chem Toxicol, 2024 Nov;193:115005.
    PMID: 39284411 DOI: 10.1016/j.fct.2024.115005
    As a cereal crop, maize ranked third place after wheat and rice in terms of land area coverage for its cultivation, and in Bangladesh, it ranked second place after rice in its production. As the substitution of wheat products, maize has been used widely in baking for human consumption and animal fodder. However, maize grown in this soil around the coal-burning power plant may cause heavy metals uptake that poses a risk to humans. The study was conducted at the maize fields in the Ganges delta floodplain soils of Bangladesh to know the concentration of eight heavy metals (Ni, Cr, Cd, Mn, As, Cu, Zn, and Pb) in soil and maize samples using an inductively coupled plasma mass spectrometer (ICP-MS) and to estimate the risk of heavy metals in maize grains. Mean concentrations of heavy metals (mg/kg) in soil were in decreasing order of Zn (10.12) > Cu (10.02) > Mn (5.48) > Ni (4.95) > Cr (3.72) > As (0.51) > Pb (0.27) > Cd (0.23). The plant tissues showed the descending order of heavy metal concentration as roots > grains > stems > leaves. BCF values for As, Cd, Pb, and Mn in roots were higher than 1.0, indicating considerable accumulation of these elements in maize via roots. Total hazard quotient (ƩTHQ) of heavy metals through maize grain consumption was 3.7E+00 and 3.9E+00 for adults and children, respectively, indicating non-cancer risk to the consumers. Anthropogenic influences contributed to the heavy metals enrichment in the Ganges delta floodplain soils around the thermal plant, and potential risks (non-carcinogenic and carcinogenic) were observed due to the consumption of maize grain cultivated in the study area.
    Matched MeSH terms: Soil/chemistry
  8. Urease-catalyzed microbial and enzymatic carbonate precipitation for eco-friendly heavy metal remediation
    Rajasekar A, Omoregie AI, Kui KF
    Lett Appl Microbiol, 2025 Feb 03;78(2).
    PMID: 39938921 DOI: 10.1093/lambio/ovaf022
    Heavy metal contamination significantly threatens environmental and public health, necessitating effective and sustainable remediation technologies. This review explores two innovative bioremediation techniques: microbially induced calcium carbonate precipitation (MICP) and enzyme-induced calcium carbonate precipitation (EICP). Both techniques show promise for immobilizing heavy metals in laboratory and field settings. MICP utilizes the metabolic activity of ureolytic microorganisms to precipitate calcium carbonate, sequestering heavy metals such as lead, cadmium, and arsenic as stable metal-carbonate complexes. EICP, on the other hand, employs urease enzymes to catalyze calcium carbonate precipitation, offering greater control over reaction conditions and higher efficiency in environments unfavorable to microbial activity. This mini-review compares the mechanisms of MICP and EICP, focusing on factors influencing their performance, including enzyme or microbial activity, pH, temperature, and nutrient availability. Case studies illustrate their success in sequestering heavy metals, emphasizing their practical applications and environmental benefits. A comparative analysis highlights the strengths and limitations of MICP and EICP regarding cost, scalability, and challenges. This review synthesizes research to support the advancement of MICP and EICP as sustainable solutions for mitigating heavy metal contamination.
    Matched MeSH terms: Soil Pollutants/metabolism
  9. Tropical forest clearance impacts biodiversity and function, whereas logging changes structure
    Marsh CJ, Turner EC, Blonder BW, Bongalov B, Both S, Cruz RS, et al.
    Science, 2025 Jan 10;387(6730):171-175.
    PMID: 39787239 DOI: 10.1126/science.adf9856
    The impacts of degradation and deforestation on tropical forests are poorly understood, particularly at landscape scales. We present an extensive ecosystem analysis of the impacts of logging and conversion of tropical forest to oil palm from a large-scale study in Borneo, synthesizing responses from 82 variables categorized into four ecological levels spanning a broad suite of ecosystem properties: (i) structure and environment, (ii) species traits, (iii) biodiversity, and (iv) ecosystem functions. Responses were highly heterogeneous and often complex and nonlinear. Variables that were directly impacted by the physical process of timber extraction, such as soil structure, were sensitive to even moderate amounts of logging, whereas measures of biodiversity and ecosystem functioning were generally resilient to logging but more affected by conversion to oil palm plantation.
    Matched MeSH terms: Soil/chemistry
  10. Fulltext Interactive effects of irrigation and fertilization on the growth and physiological characteristics of greenhouse tomatoes, Solanum lycopersicum L
    Lyu X, Hassan HM, Zan Y, Tan J
    Sci Rep, 2025 Feb 19;15(1):6007.
    PMID: 39972100 DOI: 10.1038/s41598-025-89380-8
    Water scarcity in China poses a significant challenge for sustainable greenhouse tomato production, necessitating strategies that optimize water use without compromising yield. While previous studies have explored irrigation and fertilization separately, comprehensive research on their combined effects using soluble organic fertilizers in arid regions is lacking. This study evaluates the interactive effects of different irrigation levels and fertilizer application patterns on the growth, physiological characteristics, water use efficiency (WUE), nutrient uptake, nitrogen use efficiency (NUE), and yield of greenhouse tomatoes. A pot experiment was conducted with three irrigation levels: I1 (90-100% field capacity), I2 (72-80% field capacity), and I3 (54-60% field capacity), and four fertilizer treatments: C1 (combined soluble organic and chemical fertilizer), C2 (soluble chemical fertilizer only), C3 (sheep manure and chemical fertilizer), and C4 (soluble organic fertilizer only). Results showed that increased irrigation significantly enhanced plant height, stem diameter, leaf area, leaf SPAD value, dry matter accumulation, nitrogen uptake, and fruit yield. Among all treatments, I1C1 achieved the highest fruit yield under sufficient irrigation, whereas the I2C1 treatment maintained a relatively high yield while notably improving root-to-shoot ratio, WUE, and nitrogen uptake, indicating an optimal balance for water-limited conditions. These findings demonstrate that integrating appropriate irrigation levels with combined fertilizer application can effectively mitigate water scarcity impacts, optimizing water savings and resource use efficiency while sustaining greenhouse tomato production in arid regions.
    Matched MeSH terms: Soil/chemistry
  11. Detection of Leptospira in environmental samples of wet markets and paddy fields in Penang, Malaysia
    Ling BL, Tay ZE, Philip N
    Trop Biomed, 2025 Mar 01;42(1):51-57.
    PMID: 40163404 DOI: 10.47665/tb.42.1.009
    Leptospirosis, caused by the Leptospira spp., is endemic in humid subtropical and tropical climates. Several environmental settings can harbour the survival of Leptospira; hence, continuous surveillance of the high-risk areas is critical. This study was conducted to detect the presence of Leptospira in wet markets and paddy fields in Penang, Malaysia. A total of 62 soil and water samples were collected aseptically from three wet markets and two paddy fields. The samples were cultured twice on the sampling day and after two weeks of storage in the dark at ambient temperature. All environmental samples and positive cultures were subjected to deoxyribonucleic acid (DNA) extraction and polymerase chain reaction (PCR) targeting 16S rRNA, lipL32 and rrs genes. 16S rRNA-positive samples were further sent for sequencing. Of 62 samples, 21 (21/62, 33.9%) tested positive via culture and PCR. Wet markets significantly had a higher detection rate of leptospires (29%) than paddy fields (4.8%). Four Leptospira species (L. selangorensis, L. dzoumogneensis, L. mtsangambouensis, and L. meyeri) were identified in wet markets and three (L. meyeri, L. wolffii, and L. kmetyi) in paddy fields. Storing the environmental samples for two weeks before isolation yielded a higher positivity (11/14) than culturing samples on the sampling day (6/14). The presence of Leptospira in the environment of wet markets and paddy fields in Penang although primarily intermediate and saprophyte indicates the crucial need to implement preventive measures to prevent the possibility of leptospirosis infection among the workers.
    Matched MeSH terms: Soil Microbiology*
  12. Vertical distributions of radionuclides along the tourist-attractive Marayon Tong Hill in the Bandarban district of Bangladesh
    Siraz MMM, Roy D, Dewan MJ, Alam MS, A M J, Rashid MB, et al.
    Environ Monit Assess, 2023 Feb 10;195(3):382.
    PMID: 36759352 DOI: 10.1007/s10661-023-10921-7
    This is the first attempt in the world to depict the vertical distribution of radionuclides in the soil samples along several heights (900 feet, 1550 feet, and 1650 feet) of Marayon Tong hill in the Chittagong Hill Tracts, Bandarban by HPGe gamma-ray spectrometry. The average activity concentrations of 232Th, 226Ra, and 40K were found to be 37.15 ± 3.76 Bqkg-1, 19.69 ± 2.15 Bqkg-1, and 347.82 ± 24.50 Bqkg-1, respectively, where in most cases, 232Th exceeded the world average value of 30 Bqkg-1. According to soil characterization, soils ranged from slightly acidic to moderately acidic, with low soluble salts. The radium equivalent activity, outdoor and indoor absorbed dose rate, external and internal hazard indices, external and internal effective dose rates, gamma level index, and excess lifetime cancer risk were evaluated and found to be below the recommended or world average values; but a measurable activity of 137Cs was found at soils collected from ground level and at an altitude of 1550 feet, which possibly arises from the nuclear fallout. The evaluation of cumulative radiation doses to the inhabitants via periodic measurement is recommended due to the elevated levels of 232Th.This pioneering work in mapping the vertical distribution of naturally occurring radioactive materials (NORMs) can be an essential factual baseline data for the scientific community that may be used to evaluate the variation in NORMs in the future, especially after the commissioning of the Rooppur Nuclear Power Plant in Bangladesh in 2024.
    Matched MeSH terms: Soil/chemistry
  13. Toxicity factors, ecological and health risk assessments of heavy metal in the urban soil: a case study of an agro-machinery area in a developing country
    Islam MS, Al Bakky A, Saikat MSM, Antu UB, Akter R, Roy TK, et al.
    Environ Geochem Health, 2024 Sep 24;46(11):437.
    PMID: 39316128 DOI: 10.1007/s10653-024-02213-x
    The contribution of heavy metals in surface soils by the influences of agro-machinery factories is a significant growing concern. Heavy metals were analyzed by inductively coupled plasma mass spectrometry technique to assess human and ecological risks. The concentrations of Fe, Cd, Cr, Cu, As, Pb, Mn, Ni, and Zn in soil ranged from 18,274-22,652, 2.06-4.92, 24.8-41.9, 126.8-137.5, 9.20-25.2, 17.8-46.1, 114.4-183.1, 86.9-118.1, and 101.6-159.6 mg/kg, respectively. The enrichment factor values of heavy metals were greater than 1.5, suggesting severe anthropogenic activities such as untreated waste discharging, burning of metallic wastes, wear, and tear, and dismantling of old batteries for heavy metals enrichment in studied soil. The contamination factor indicates considerable to very high contamination of heavy metals in soil. Moderate to high ecological risk was observed for analyzed metals which mainly originated from the maintenance and repairing of various engines in the workshop and welding and soldering of metallic substances. The target hazard quotient (THQ) was ranged from 6.99E-04 to 2.21E-01 for adults and 5.59E-03 to 1.82E + 00 for children, respectively; indicating children were more sensitive to heavy metals exposure from soil dust. The carcinogenic risk of As (1.72E-05) exceeded the USEPA acceptable limits indicating cancer risk to the residence. The current emphasized the significance of intensive heavy metals monitoring in surface soils around the agro-machinery areas due to their potential health risks associated with children.
    Matched MeSH terms: Soil/chemistry
  14. Phytoremediation as a viable ecological and socioeconomic management strategy
    Phang LY, Mingyuan L, Mohammadi M, Tee CS, Yuswan MH, Cheng WH, et al.
    Environ Sci Pollut Res Int, 2024 Aug;31(38):50126-50141.
    PMID: 39103580 DOI: 10.1007/s11356-024-34585-z
    Phytoremediation is an environmentally friendly alternative to traditional remediation technologies, notably for soil restoration and agricultural sustainability. This strategy makes use of marginal areas, incorporates biofortification processes, and expands crop alternatives. The ecological and economic benefits of phytoremediation are highlighted in this review. Native plant species provide cost-effective advantages and lower risks, while using invasive species to purify pollutants might be a potential solution to the dilemma of not removing them from the new habitat. Thus, strict management measures should be used to prevent the overgrowth of invasive species. The superior advantages of phytoremediation, including psychological and social improvements, make it a powerful tool for both successful cleanup and community well-being. Its ability to generate renewable biomass and adapt to a variety of uses strengthens its position in developing the bio-based economy. However, phytoremediation faces severe difficulties such as complex site circumstances and stakeholder doubts. Overcoming these challenges necessitates a comprehensive approach that balances economic viability, environmental protection, and community welfare. Incorporating regulatory standards such as ASTM and ISO demonstrates a commitment to long-term environmental sustainability, while also providing advice for unique nation-specific requirements. Finally, phytoremediation may contribute to a pleasant coexistence of human activity and the environment by navigating hurdles and embracing innovation.
    Matched MeSH terms: Soil Pollutants/metabolism
  15. Microbial consortium with multifunctional attributes for the plant growth of eggplant (Solanum melongena L.)
    Kaur T, Devi R, Negi R, Kumar S, Singh S, Rustagi S, et al.
    Folia Microbiol (Praha), 2024 Dec;69(6):1255-1266.
    PMID: 38668814 DOI: 10.1007/s12223-024-01168-x
    In the past few decades, the pressure of higher food production to satisfy the demand of ever rising population has inevitably increased the use synthetic agrochemicals which have deterioration effects. Biostimulants containing beneficial microbes (single inoculants and microbial consortium) were found as an ideal substitute of synthetic chemical fertilizers. In recent years, microbial consortium is known as a better bioinoculant in comparison to single inoculant bioformulation because of multifarious plant growth-promoting advantages. Looking at the advantageous effect of consortium, in present investigation, different bacteria were isolated from rhizospheric soil and plant samples collected from the Himalayan mountains on the green slopes of the Shivaliks, Himachal Pradesh. The isolated bacteria were screened for nitrogen (N) fixation, phosphorus (P) solubilization and potassium (K) solubilization plant growth promoting attributes, and efficient strains were identified through 16S rRNA gene sequencing and BLASTn analysis. The bacteria showing a positive effect in NPK uptake were developed as bacterial consortium for the growth promotion of eggplant crop. A total of 188 rhizospheric and endophytic bacteria were sorted out, among which 13 were exhibiting nitrogenase activity, whereas 43 and 31 were exhibiting P and K solubilization traits, respectively. The selected three efficient and potential bacterial strains were identified using 16S rRNA gene sequencing as Enterobacter ludwigii EU-BEN-22 (N-fixer; 35.68 ± 00.9 nmol C2H4 per mg protein per h), Micrococcus indicus EU-BRP-6 (P-solubilizer; 201 ± 0.004 mg/L), and Pseudomonas gessardii EU-BRK-55 (K-solubilizer; 51.3 ± 1.7 mg/mL), and they were used to develop a bacterial consortium. The bacterial consortium evaluation on eggplant resulted in the improvement of growth (root/shoot length and biomass) and physiological parameters (chlorophyll, carotenoids, total soluble sugar, and phenolic content) of the plants with respect to single culture inoculation, chemical fertilizer, and untreated control. A bacterial consortium having potential to promote plant growth could be used as bioinoculant for horticulture crops growing in hilly regions.
    Matched MeSH terms: Soil Microbiology*
  16. Circular economy in action: palm oil kernel biochar and boiler ash enhance growth of Amaranthus viridis via ROS-induced antioxidants modulation
    Yaacob JS, Sheba M, Lee GC, Abdullah R, Rusli LS, Fariduddin Q, et al.
    Environ Sci Pollut Res Int, 2026 Jan;33(3):865-884.
    PMID: 41533037 DOI: 10.1007/s11356-025-37363-7
    Soil salinization significantly hampers global food production, posing a serious threat to food security. Biochar and boiler ash, byproducts of the oil palm industry, have shown potential as soil amendments to enhance soil quality and support plant growth under saline soils. This study evaluated the effects of biochar and boiler ash on the growth performance of Amaranthus viridis cultivated in saline soil. Plants were subjected to four treatments: saline soil (SS) without amendments (control), SS with NPK fertilizer (N), SS with NPK and biochar (BCN), and SS with NPK and boiler ash (BAN). Among the salt-stressed plants, those grown with BAN exhibited the highest plant height, leaf count, leaf width, SPAD value, and fresh and dry biomass, followed by those in the BCN treatment. Biochar application reduced the EC of the saline soil, while both biochar and boiler ash increased soil pH. Control plants recorded the lowest levels of chlorophyll a, chlorophyll b, and carotenoids. On the other hand, pigment contents were significantly improved in salt-stressed plants treated with biochar and boiler ash. BAN-treated plants showed the highest chlorophyll b levels, while BCN-treated plants exhibited the highest carotenoid and chlorophyll a levels. Furthermore, biochar and boiler ash supplementation reduced oxidative stress markers (H2O2 and MDA) while enhancing antioxidant defenses, including proline, ascorbic acid, ascorbate peroxidase, catalase, and secondary metabolites such as anthocyanins, flavonoids, and phenolic compounds. These findings suggest that biochar and boiler ash, when combined with NPK fertilizer, serve as effective soil amendments for mitigating salt stress and enhancing plant growth and physiological resilience in saline environments.
    Matched MeSH terms: Soil/chemistry
  17. Fulltext Complete Genome Sequence of Streptomyces sp. TN58, a Producer of Acyl Alpha-l-Rhamnopyranosides
    Najah S, Chong TM, Gerbaud C, Chan KG, Mellouli L, Pernodet JL
    Genome Announc, 2017 Aug 24;5(34).
    PMID: 28839022 DOI: 10.1128/genomeA.00828-17
    Streptomyces sp. TN58, isolated from a Tunisian soil sample, produces several natural products, including acyl alpha-l-rhamnopyranosides. It possesses a 7.6-Mb linear chromosome. This is, to our knowledge, the first genome sequence of a microorganism known to produce acyl alpha-l-rhamnopyranosides, and it will be helpful to study the biosynthesis of these specialized metabolites.
    Matched MeSH terms: Soil
  18. Reactive oxygen species and glutathione antioxidants in the testis of the soil biosentinel Podarcis sicula (Rafinesque 1810)
    Guerriero G, D'Errico G, Di Giaimo R, Rabbito D, Olanrewaju OS, Ciarcia G
    Environ Sci Pollut Res Int, 2018 Jul;25(19):18286-18296.
    PMID: 28936697 DOI: 10.1007/s11356-017-0098-8
    Important toxicological achievements have been made during the last decades using reptiles. We focus our investigation on gonadal reproductive health of the soil biosentinel Podarcis sicula which is very sensitive to endocrine-disrupting chemicals. The aim of this study is to quantitatively detect, by sensitive microassays, reactive oxygen species and the glutathione antioxidants in the testis and investigate if they are differentially expressed before and after remediation of a site of the "Land of Fires" (Campania, Italy) subject to illicit dumping of unknown material. The oxidative stress level was evaluated by electron spin resonance spectroscopy applying a spin-trapping procedure able to detect products of lipid peroxidation, DNA damage and repair by relative mobility shift, and poly(ADP-ribose) polymerase enzymatic activity, respectively, the expression of glutathione peroxidase 4 transcript by real-time quantitative PCR analysis, the antioxidant glutathione S-transferase, a well-assessed pollution index, by enzymatic assay and the total soluble antioxidant capacity. Experimental evidences from the different techniques qualitatively agree, thus confirming the robustness of the combined experimental approach. Collected data, compared to those from a reference unpolluted site constitute evidence that the reproductive health of this lizard is impacted by pollution exposure. Remediation caused significant reduction of reactive oxygen species and downregulation of glutathione peroxidase 4 mRNAs in correspondence of reduced levels of glutathione S-transferase, increase of antioxidant capacity, and repair of DNA integrity. Taken together, our results indicate directions to define new screening approaches in remediation assessment.
    Matched MeSH terms: Soil/chemistry; Soil Pollutants/toxicity
  19. Effect of temperature on thermophilic composting of aquaculture sludge: NH3 recovery, nitrogen mass balance, and microbial community dynamics
    Koyama M, Nagao N, Syukri F, Rahim AA, Kamarudin MS, Toda T, et al.
    Bioresour Technol, 2018 Oct;265:207-213.
    PMID: 29902653 DOI: 10.1016/j.biortech.2018.05.109
    Development of thermophilic composting for maximizing NH3 gas recovery would enable the production of a nitrogen source which is free from pathogen/heavy metal, for the cultivation of high-value microalgae. The present study examined the effect of NH3 recovery, nitrogen mass balance, and microbial community dynamics on thermophilic composting of shrimp aquaculture sludge. The emission of NH3 gas at 60 and 70 °C was 14.7% and 15.6%, respectively, which was higher than that at 50 °C (9.0%). The nitrogen mass balance analysis revealed that higher temperatures enhanced the solubilization of non-dissolved nitrogen and liberation of NH3 gas from the produced NH4+-N. High-throughput microbial community analysis revealed the shift of the dominant bacterial group from Bacillus to Geobacillus with the rise of composting temperature. In conclusion, thermophilic composting of shrimp aquaculture sludge at 60-70 °C was the most favorable condition for enhancing NH3 gas recovery.
    Matched MeSH terms: Soil
  20. Fulltext Analysis of ground potential distribution under lightning current condition
    Chandima Gomes, Riyadh Z. Sabry
    Pertanika Journal of Science & Technology, 2017;25(102):181-188.
    MyJurnal
    The grounding system of a lightning protection scheme is designed basically to avoid arcing and
    dangerous step potentials. The grounding impedance of the system varies depending on soil structure and frequency. This paper describes the effect of harmonic impedance (also called frequency dependence of soil) on potential distribution under lightning strike to a metal tower with single grounding path, for different soil types. The results show that the peak value of ground potential rise (GPR) and step voltage (SP) may reach extremely hazardous values even at distances in the order of 90 m from the tower footing, especially when soil resistivity is high. Hence, we emphasise that, in contrast to power grounding, when designing of grounding systems that are meant to handle transient or high frequency currents as well, the frequency dependent soil parameters should be considered to avoid hazardous situations, especially at locations with a high probability of lightning strikes such as metal towers.
    Matched MeSH terms: Soil
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