Browse publications by year: 2016

  1. Mashmoul M, Azlan A, Mohtarrudin N, Mohd Yusof BN, Khaza'ai H, Khoo HE, et al.
    BMC Complement Altern Med, 2016 Oct 22;16(1):401.
    PMID: 27770798
    Saffron is the dried stigma of Crocus sativus L. flower which commonly used as a natural remedy to enhance health and even fights disease in the Middle-East and Southeast Asian countries.
    MeSH terms: Adipose Tissue/drug effects*; Animals; Disease Models, Animal; Eating; Liver/drug effects; Male; Obesity/metabolism*; Organ Size/drug effects; Plant Extracts/pharmacology*; Plant Extracts/chemistry; Rats, Sprague-Dawley; Protective Agents/pharmacology*; Protective Agents/chemistry; Crocus/chemistry*; Rats; Diet, High-Fat; Non-alcoholic Fatty Liver Disease/metabolism*
  2. Mohd Yusof YA
    Adv Exp Med Biol, 2016;929:177-207.
    PMID: 27771925
    Since antiquity, ginger or Zingiber officinale, has been used by humans for medicinal purposes and as spice condiments to enhance flavor in cooking. Ginger contains many phenolic compounds such as gingerol, shogaol and paradol that exhibit antioxidant, anti-tumor and anti-inflammatory properties. The role of ginger and its constituents in ameliorating diseases has been the focus of study in the past two decades by many researchers who provide strong scientific evidence of its health benefit. This review discusses research findings and works devoted to gingerols, the major pungent constituent of ginger, in modulating and targeting signaling pathways with subsequent changes that ameliorate, reverse or prevent chronic diseases in human studies and animal models. The physical, chemical and biological properties of gingerols are also described. The use of ginger and especially gingerols as medicinal food derivative appears to be safe in treating or preventing chronic diseases which will benefit the common population, clinicians, patients, researchers, students and industrialists.
    MeSH terms: Animals; Anti-Inflammatory Agents/isolation & purification; Anti-Inflammatory Agents/therapeutic use*; Anti-Inflammatory Agents/chemistry; Antineoplastic Agents, Phytogenic/isolation & purification; Antineoplastic Agents, Phytogenic/therapeutic use*; Antineoplastic Agents, Phytogenic/chemistry; Antioxidants/isolation & purification; Antioxidants/therapeutic use*; Antioxidants/chemistry; Catechols/isolation & purification; Catechols/therapeutic use*; Catechols/chemistry; Chronic Disease/drug therapy*; Disease Models, Animal; Fatty Alcohols/isolation & purification; Fatty Alcohols/therapeutic use*; Fatty Alcohols/chemistry; Humans; Phytotherapy; Plants, Medicinal; Structure-Activity Relationship; Molecular Structure; Signal Transduction/drug effects; Ginger/chemistry*; Drug Discovery/methods*
  3. Mohamad Zaki FH, Nik Hussain NH, Ismail P, Wan Yusoff WZ, Othman NH
    Pathology, 2016 Feb;48 Suppl 1:S148.
    PMID: 27772923 DOI: 10.1016/j.pathol.2015.12.402
    Background: The major problem with cervical cancer screening in countries which have no organized national screening program for cervical cancer is sub-optimal participation. Implementation of self-sampling method may increase the participation of women to screen for cervical cancer.
    Aims: To determine the agreement of cytological diagnoses made on samples collected by women themselves (self-sampling) versus cytological diagnoses made on samples collected
    by physicians (Physician sampling)
    Methods: We invited women volunteers to undergo two procedures; cervical self-sampling using the Evalyn brush and physician scraping using Cervex brush. They women were
    shown a video presentation on how to take their own cervical samples before the procedure. The samples taken by physicians were taken as per routine testing (Gold Standard). All
    samples were subjected to Thin Prep monolayer smears. The diagnoses made were according to the Bethesda classification. The results from the two sampling methods were analysed and compared.
    Results: A total of 367 women were recruited into the study. Thin Prep smears by physicians were better in terms of volume and variety of the cells seen. There is significant good agreement of the cytological diagnoses made on the samples from the two sampling methods with the Kappa value of 0.568 (p=0.040). The Thin Prep smears by self-sampling method were better in detecting microorganisms.
    Conclusion: This study shows that samples taken by women themselves (self-sampling) and physicians sampling had good cytology agreement. Self-sampling could be the method of
    choice in countries in which the coverage of women attending clinics for screening for cervical cancer is poor.
    MeSH terms: Humans; Malaysia; Mass Screening; Vaginal Smears
  4. Rahman WF, Jalil NA, Samsudin H, Merican SR, Lam AK
    Pathology, 2016 Feb;48 Suppl 1:S160.
    PMID: 27772966 DOI: 10.1016/j.pathol.2015.12.439
  5. Tan HL, Chan KG, Pusparajah P, Duangjai A, Saokaew S, Mehmood Khan T, et al.
    Front Pharmacol, 2016;7:362.
    PMID: 27774066
    Cardiovascular diseases (CVDs) are among the leading causes of morbidity and mortality in both the developed and developing world. Rhizoma coptidis (RC), known as Huang Lian in China, is the dried rhizome of medicinal plants from the family Ranunculaceae, such as Coptis chinensis Franch, C. deltoidea C.Y. Cheng et Hsiao, and C. teeta Wall which has been used by Chinese medicinal physicians for more than 2000 years. In China, RC is a common component in traditional medicines used to treat CVD associated problems including obesity, diabetes mellitus, hyperlipidemia, hyperglycemia and disorders of lipid metabolism. In recent years, numerous scientific studies have sought to investigate the biological properties of RC to provide scientific evidence for its traditional medical uses. RC has been found to exert significant beneficial effects on major risk factors for CVDs including anti-atherosclerotic effect, lipid-lowering effect, anti-obesity effect and anti-hepatic steatosis effect. It also has myocardioprotective effect as it provides protection from myocardial ischemia-reperfusion injury. These properties have been attributed to the presence of bioactive compounds contained in RC such as berberine, coptisine, palmatine, epiberberine, jatrorrhizine, and magnoflorine; all of which have been demonstrated to have cardioprotective effects on the various parameters contributing to the occurrence of CVD through a variety of pathways. The evidence available in the published literature indicates that RC is a herb with tremendous potential to reduce the risks of CVDs, and this review aims to summarize the cardioprotective properties of RC with reference to the published literature which overall indicates that RC is a herb with remarkable potential to reduce the risks and damage caused by CVDs.
    MeSH terms: Berberine; Cardiovascular Diseases; Drugs, Chinese Herbal; Hyperlipidemias; Plants, Medicinal; Risk Factors; Rhizome; Ranunculaceae; Coptis; Lipid Metabolism
  6. Banerjee I, Sathian B, Gupta RK, Amarendra A, Roy B, Bakthavatchalam P, et al.
    Nepal J Epidemiol, 2016 Jun;6(2):574-581.
    PMID: 27774346
    In developing countries like Nepal medicines can be acquired from the chemist's without of a prescription which sometime may have many drawbacks due to intake of excessive drugs without a proper diagnosis. The primary objective of the study was to find out the pattern of self-medication practice among the preclinical medical students at Manipal College of Medical Sciences.
    MeSH terms: Developing Countries; Humans; Medicine; Nepal; Self Medication; Students, Medical; Universities; Prescriptions
  7. Kameel NI, Shuib AS, Tayyab S
    Protein Pept Lett, 2016;23(12):1111-1117.
    PMID: 27774894
    Acid denaturation of champedak galactose-binding (CGB) lectin was studied in the pH range, 7.0-1.0 using intrinsic fluorescence and ANS fluorescence measurements. The lectin remained stable up to pH 5.0 and showed local disordering in the vicinity of the protein fluorophores within the pH range, 5.0-3.5. Decrease in the pH from pH 3.5 to pH 2.5 led to structural transition, marked by the decrease in the intrinsic fluorescence and increase in the ANS fluorescence signals. This can be ascribed to the dissociation of the tetrameric lectin into monomeric forms. Further decrease in the pH up to pH 1.5 produced another transition, which specified the unfolding of monomers as reflected from the decrease in both intrinsic fluorescence and ANS fluorescence signals. Characterization of the conformational states obtained at pH 7.0, pH 2.5 and pH 1.5 based on intrinsic and ANS fluorescence spectra, gel chromatographic behavior and thermal denaturation confirmed the existence of folded monomeric forms at pH 2.5 and unfolded states at pH 1.5. However, the aciddenatured state of CGB lectin at pH 1.5 retained significant residual structure, as evident from the greater loss of both secondary and tertiary structures in the presence of 6 M guanidine hydrochloride at low pH values. Anion-induced refolding below pH 1.5 was also seen using ANS fluorescence measurements.
    MeSH terms: Anilino Naphthalenesulfonates/chemistry; Circular Dichroism; Fluorescent Dyes; Hydrogen-Ion Concentration; Protein Conformation; Protein Denaturation*; Spectrometry, Fluorescence; Guanidine/chemistry; Artocarpus/metabolism*; Galectins/chemistry*
  8. Rahimah AN, Shahfi FI, Masaany M, Gazali N, Siti SH
    J Laryngol Otol, 2016 Oct;130(10):967-968.
    PMID: 27774924
    Laryngotracheal stenosis is a complex condition of airway compromise involving either the larynx or trachea, or both.
    MeSH terms: Adolescent; Adult; Aged; Child; Equipment Design; Humans; Infant; Intubation, Intratracheal/instrumentation*; Intubation, Intratracheal/methods; Laryngoscopy/instrumentation*; Laryngoscopy/methods; Laryngostenosis/surgery*; Larynx/surgery; Middle Aged; Silicon; Trachea/surgery; Tracheal Stenosis/surgery*
  9. Jiang L, Hindmarch CC, Rogers M, Campbell C, Waterfall C, Coghill J, et al.
    Sci Rep, 2016 10 24;6:35671.
    PMID: 27774996 DOI: 10.1038/srep35671
    Glucocorticoids are steroids that reduce inflammation and are used as immunosuppressive drugs for many diseases. They are also the mainstay for the treatment of minimal change nephropathy (MCN), which is characterised by an absence of inflammation. Their mechanisms of action remain elusive. Evidence suggests that immunomodulatory drugs can directly act on glomerular epithelial cells or 'podocytes', the cell type which is the main target of injury in MCN. To understand the nature of glucocorticoid effects on non-immune cell functions, we generated RNA sequencing data from human podocyte cell lines and identified the genes that are significantly regulated in dexamethasone-treated podocytes compared to vehicle-treated cells. The upregulated genes are of functional relevance to cytoskeleton-related processes, whereas the downregulated genes mostly encode pro-inflammatory cytokines and growth factors. We observed a tendency for dexamethasone-upregulated genes to be downregulated in MCN patients. Integrative analysis revealed gene networks composed of critical signaling pathways that are likely targeted by dexamethasone in podocytes.
    MeSH terms: Cells, Cultured; Dexamethasone/pharmacology; Epithelial Cells/drug effects*; Epithelial Cells/metabolism; Glucocorticoids/genetics*; Humans; RNA/genetics*; Signal Transduction/drug effects; Signal Transduction/genetics*; Down-Regulation/drug effects; Down-Regulation/genetics; Up-Regulation/drug effects; Up-Regulation/genetics; Sequence Analysis, RNA/methods; Podocytes/drug effects; Podocytes/metabolism*; Gene Regulatory Networks/drug effects; Gene Regulatory Networks/genetics*
  10. Samuel MS, Rath N, Masre SF, Boyle ST, Greenhalgh DA, Kochetkova M, et al.
    Genesis, 2016 Dec;54(12):636-646.
    PMID: 27775859 DOI: 10.1002/dvg.22988
    The serine/threonine kinases ROCK1 and ROCK2 are central mediators of actomyosin contractile force generation that act downstream of the RhoA small GTP-binding protein. As a result, they have key roles in regulating cell morphology and proliferation, and have been implicated in numerous pathological conditions and diseases including hypertension and cancer. Here we describe the generation of a gene-targeted mouse line that enables CRE-inducible expression of a conditionally-active fusion between the ROCK2 kinase domain and the hormone-binding domain of a mutated estrogen receptor (ROCK2:ER). This two-stage system of regulation allows for tissue-selective expression of the ROCK2:ER fusion protein, which then requires administration of estrogen analogues such as tamoxifen or 4-hydroxytamoxifen to elicit kinase activity. This conditional gain-of-function system was validated in multiple tissues by crossing with mice expressing CRE recombinase under the transcriptional control of cytokeratin14 (K14), murine mammary tumor virus (MMTV) or cytochrome P450 Cyp1A1 (Ah) promoters, driving appropriate expression in the epidermis, mammary or intestinal epithelia respectively. Given the interest in ROCK signaling in normal physiology and disease, this mouse line will facilitate research into the consequences of ROCK activation that could be used to complement conditional knockout models. Birth Defects Research (Part A) 106:636-646, 2016. © 2016 Wiley Periodicals, Inc.
    MeSH terms: Animals; Epidermis/metabolism; Female; Humans; Intestinal Mucosa/metabolism; Mammary Glands, Animal/metabolism; Organ Specificity/genetics; Promoter Regions, Genetic/genetics; Recombinant Fusion Proteins/biosynthesis; Recombinant Fusion Proteins/genetics*; Tamoxifen/administration & dosage; Signal Transduction/drug effects; Gene Expression Regulation, Developmental/drug effects; Cytochrome P-450 CYP1A1/genetics; Integrases/genetics; Estrogen Receptor alpha/biosynthesis; Estrogen Receptor alpha/genetics*; Mice; rho-Associated Kinases/biosynthesis; rho-Associated Kinases/genetics*
  11. Ullah I, Bhattacharyya K, Shafie S, Khan I
    PLoS One, 2016;11(10):e0165348.
    PMID: 27776174 DOI: 10.1371/journal.pone.0165348
    Numerical results are presented for the effect of first order chemical reaction and thermal radiation on mixed convection flow of Casson fluid in the presence of magnetic field. The flow is generated due to unsteady nonlinearly stretching sheet placed inside a porous medium. Convective conditions on wall temperature and wall concentration are also employed in the investigation. The governing partial differential equations are converted to ordinary differential equations using suitable transformations and then solved numerically via Keller-box method. It is noticed that fluid velocity rises with increase in radiation parameter in the case of assisting flow and is opposite in the case of opposing fluid while radiation parameter has no effect on fluid velocity in the forced convection. It is also seen that fluid velocity and concentration enhances in the case of generative chemical reaction whereas both profiles reduces in the case of destructive chemical reaction. Further, increase in local unsteadiness parameter reduces fluid velocity, temperature and concentration. Over all the effects of physical parameters on fluid velocity, temperature and concentration distribution as well as on the wall shear stress, heat and mass transfer rates are discussed in detail.
    MeSH terms: Hot Temperature*; Models, Theoretical*; Porosity*
  12. Novroski NMM, King JL, Churchill JD, Seah LH, Budowle B
    Forensic Sci Int Genet, 2016 11;25:214-226.
    PMID: 27697609 DOI: 10.1016/j.fsigen.2016.09.007
    Massively parallel sequencing (MPS) can identify sequence variation within short tandem repeat (STR) alleles as well as their nominal allele lengths that traditionally have been obtained by capillary electrophoresis. Using the MiSeq FGx Forensic Genomics System (Illumina), STRait Razor, and in-house excel workbooks, genetic variation was characterized within STR repeat and flanking regions of 27 autosomal, 7 X-chromosome and 24 Y-chromosome STR markers in 777 unrelated individuals from four population groups. Seven hundred and forty six autosomal, 227 X-chromosome, and 324 Y-chromosome STR alleles were identified by sequence compared with 357 autosomal, 107 X-chromosome, and 189 Y-chromosome STR alleles that were identified by length. Within the observed sequence variation, 227 autosomal, 156 X-chromosome, and 112 Y-chromosome novel alleles were identified and described. One hundred and seventy six autosomal, 123 X-chromosome, and 93 Y-chromosome sequence variants resided within STR repeat regions, and 86 autosomal, 39 X-chromosome, and 20 Y-chromosome variants were located in STR flanking regions. Three markers, D18S51, DXS10135, and DYS385a-b had 1, 4, and 1 alleles, respectively, which contained both a novel repeat region variant and a flanking sequence variant in the same nucleotide sequence. There were 50 markers that demonstrated a relative increase in diversity with the variant sequence alleles compared with those of traditional nominal length alleles. These population data illustrate the genetic variation that exists in the commonly used STR markers in the selected population samples and provide allele frequencies for statistical calculations related to STR profiling with MPS data.
    MeSH terms: Gene Frequency; Genetic Markers; Genetics, Population; Humans; United States; Genetic Variation*; Polymerase Chain Reaction; DNA Fingerprinting; Microsatellite Repeats*; Chromosomes, Human, X; Chromosomes, Human, Y; Continental Population Groups/genetics*; High-Throughput Nucleotide Sequencing*
  13. Miao H, Hartman M, Verkooijen HM, Taib NA, Wong HS, Subramaniam S, et al.
    BMC Cancer, 2016 10 21;16(1):820.
    PMID: 27769212
    BACKGROUND: CancerMath is a set of web-based prognostic tools which predict nodal status and survival up to 15 years after diagnosis of breast cancer. This study validated its performance in a Southeast Asian setting.

    METHODS: Using Singapore Malaysia Hospital-Based Breast Cancer Registry, clinical information was retrieved from 7064 stage I to III breast cancer patients who were diagnosed between 1990 and 2011 and underwent surgery. Predicted and observed probabilities of positive nodes and survival were compared for each subgroup. Calibration was assessed by plotting observed value against predicted value for each decile of the predicted value. Discrimination was evaluated by area under a receiver operating characteristic curve (AUC) with 95 % confidence interval (CI).

    RESULTS: The median predicted probability of positive lymph nodes is 40.6 % which was lower than the observed 43.6 % (95 % CI, 42.5 %-44.8 %). The calibration plot showed underestimation for most of the groups. The AUC was 0.71 (95 % CI, 0.70-0.72). Cancermath predicted and observed overall survival probabilities were 87.3 % vs 83.4 % at 5 years after diagnosis and 75.3 % vs 70.4 % at 10 years after diagnosis. The difference was smaller for patients from Singapore, patients diagnosed more recently and patients with favorable tumor characteristics. Calibration plot also illustrated overprediction of survival for patients with poor prognosis. The AUC for 5-year and 10-year overall survival was 0.77 (95 % CI: 0.75-0.79) and 0.74 (95 % CI: 0.71-0.76).

    CONCLUSIONS: The discrimination and calibration of CancerMath were modest. The results suggest that clinical application of CancerMath should be limited to patients with better prognostic profile.

    MeSH terms: Asia, Southeastern/epidemiology; Breast Neoplasms/diagnosis; Breast Neoplasms/mortality; Breast Neoplasms/epidemiology*; Breast Neoplasms/therapy; Female; Humans; Neoplasm Metastasis; Neoplasm Staging; Population Surveillance; Prognosis; Registries; Area Under Curve; Kaplan-Meier Estimate; Patient Outcome Assessment
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