Displaying publications 41 - 60 of 490 in total

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  1. Fulltext The Study of Drag Reduction on Ships Inspired by Simplified Shark Skin Imitation
    Ibrahim MD, Amran SNA, Yunos YS, Rahman MRA, Mohtar MZ, Wong LK, et al.
    Appl Bionics Biomech, 2018;2018:7854321.
    PMID: 29853998 DOI: 10.1155/2018/7854321
    The skin of a fast swimming shark reveals riblet structures that help reduce the shark's skin friction drag, enhancing its efficiency and speed while moving in the water. Inspired by the structure of the shark skin denticles, our team has carried out a study as an effort in improving the hydrodynamic design of marine vessels through hull design modification which was inspired by this riblet structure of shark skin denticle. Our study covers on macroscaled design modification. This is an attempt to propose an alternative for a better economical and practical modification to obtain a more optimum cruising characteristics for marine vessels. The models used for this study are constructed using computer-aided design (CAD) software, and computational fluid dynamic (CFD) simulations are then carried out to predict the effectiveness of the hydrodynamic effects of the biomimetic shark skins on those models. Interestingly, the numerical calculated results obtained show that the presence of biomimetic shark skin implemented on the vessels give about 3.75% reduction of drag coefficient as well as reducing up to 3.89% in drag force experienced by the vessels. Theoretically, as force drag can be reduced, it can lead to a more efficient vessel with a better cruising speed. This will give better impact to shipping or marine industries around the world. However, it can be suggested that an experimental procedure is best to be conducted to verify the numerical result that has been obtained for further improvement on this research.
    Matched MeSH terms: Physical Phenomena
  2. Fulltext The Role of Two-Step Blending in the Properties of Starch/Chitin/Polylactic Acid Biodegradable Composites for Biomedical Applications
    Olaiya NG, Nuryawan A, Oke PK, Khalil HPSA, Rizal S, Mogaji PB, et al.
    Polymers (Basel), 2020 Mar 05;12(3).
    PMID: 32151004 DOI: 10.3390/polym12030592
    The current research trend for excellent miscibility in polymer mixing is the use of plasticizers. The use of most plasticizers usually has some negative effects on the mechanical properties of the resulting composite and can sometimes make it toxic, which makes such polymers unsuitable for biomedical applications. This research focuses on the improvement of the miscibility of polymer composites using two-step mixing with a rheomixer and a mix extruder. Polylactic acid (PLA), chitin, and starch were produced after two-step mixing, using a compression molding method with decreasing composition variation (between 8% to 2%) of chitin and increasing starch content. A dynamic mechanical analysis (DMA) was used to study the mechanical behavior of the composite at various temperatures. The tensile strength, yield, elastic modulus, impact, morphology, and compatibility properties were also studied. The DMA results showed a glass transition temperature range of 50 °C to 100 °C for all samples, with a distinct peak value for the loss modulus and factor. The single distinct peak value meant the polymer blend was compatible. The storage and loss modulus increased with an increase in blending, while the loss factor decreased, indicating excellent compatibility and miscibility of the composite components. The mechanical properties of the samples improved compared to neat PLA. Small voids and immiscibility were noticed in the scanning electron microscopy images, and this was corroborated by X-ray diffraction graphs that showed an improvement in the crystalline nature of PLA with starch. Bioabsorption and toxicity tests showed compatibility with the rat system, which is similar to the human system.
    Matched MeSH terms: Physical Phenomena
  3. Fulltext The Effects of Loading Conditions on the Behaviour of Fixed-Ended Plain Channel Columns
    Yidris N, Isham NH, Gires E, Mutafi A
    Materials (Basel), 2020 Mar 21;13(6).
    PMID: 32245266 DOI: 10.3390/ma13061441
    The compressive behaviour of column members can be considerably affected by local buckling, material yielding and local end conditions. In this paper, the effects of the loading conditions at the ends of plain channel section columns subjected to uniformly compressed loading, and fixed conditions at the column ends with respect to global rotations, was examined. Finite element simulation was employed to look at the post-buckled response of thin-walled, plain channel section columns that covered the complete loading history of the compression columns from the onset of elastic local buckling through the nonlinear elastic and elastoplastic post-buckling phases of behaviour to final collapse and unloading. Two types of loading conditions were considered: the first was one that has been used practically in tests whereby one end is loaded with a moving top platen while the other end is fixed at the lower platen, but, for the second loading condition, both ends were loaded with equally moving top and lower platens. These two conditions were shown to lead to quite different characteristic interactive responses of the columns due to mode jumping in the buckling mode for the locally rotationally constrained case.
    Matched MeSH terms: Physical Phenomena
  4. Fulltext The Effect of a Setting Accelerator on the Physical and Mechanical Properties of a Fast-set White Portland Cement Mixed with Nano-zirconium Oxide
    Chen YZ, Yong MJ, Tan VY, Kong SLS, Elnawawy HMA, Yahya NA, et al.
    Eur Endod J, 2023 May;8(3):215-224.
    PMID: 37257037 DOI: 10.14744/eej.2023.36449
    OBJECTIVE: This study compared the effects of calcium chloride dihydrate (CaCl2.2H2O) on the physical properties and push-out bond strength of white Mineral Trioxide Aggregate (WMTA) and an experimental Malaysian Portland cement mixed with nano-zirconium oxide (nano-ZrO) [(radiopaque Malaysian Portland cement (RMPC). Mineral Trioxide Aggregate (MTA) was the first calcium silicate cement (CSC) introduced in dentistry, but up to date, it is an expensive cement with long setting time and causes tooth discolouration. Although Portland cement has been introduced as a potential substitute to MTA, it still faces some challenges such as long setting time and lack of sufficient radiopacity.

    METHODS: Four groups [WMTA, RMPC, fast-set WMTA (FS-WMTA) and fast-set RMPC (FS-RMPC)] were prepared. Initial setting time was evaluated using Vicat apparatus. The pH was measured at seven-day intervals. For discolouration potential, cements were packed in the pulp chamber of 46 extracted maxillary incisors. Spectrophotometric readings were obtained at seven-day intervals, and the rate of colour change (ΔE) was recorded. For the push-out bond strength testing, cements were applied in 48 sectioned root samples, and the test was performed using universal testing machine at crosshead speed of 0.5 mm/min until bond failure. Statistical analysis was done according to the nature of each group of data using SPSS 26.

    RESULTS: Addition of CaCl2.2H2O decreased the initial setting times of both RMPC and WMTA significantly (p<0.05). The pH values of FS-WMTA and FS-RMPC were comparable to their non-accelerated counterparts ranging from 10 to 12. Discolouration effect was more obviously observed with WMTA and FS-WMTA with time compared to RMPC formulations. Push-out bond strength of the two materials also showed an increase with the addition of the accelerator, however, only FS-WMTA showed statistically significant difference compared to WMTA (p<0.05).

    CONCLUSION: The addition of CaCl2.2H2O improves the physical and mechanical properties of the newly formulated RMPC and WMTA. The RMPC formulation overcomes the discolouration potential of WMTA. (EEJ-2022-12-155).

    Matched MeSH terms: Physical Phenomena
  5. Fulltext The Effect of Welding Current and Electrode Force on the Heat Input, Weld Diameter, and Physical and Mechanical Properties of SS316L/Ti6Al4V Dissimilar Resistance Spot Welding with Aluminum Interlayer
    Taufiqurrahman I, Ahmad A, Mustapha M, Lenggo Ginta T, Ady Farizan Haryoko L, Ahmed Shozib I
    Materials (Basel), 2021 Feb 27;14(5).
    PMID: 33673716 DOI: 10.3390/ma14051129
    Welding parameters obviously determine the joint quality during the resistance spot welding process. This study aimed to investigate the effect of welding current and electrode force on the heat input and the physical and mechanical properties of a SS316L and Ti6Al4V joint with an aluminum interlayer. The weld current values used in this study were 11, 12, and 13 kA, while the electrode force values were 3, 4, and 5 kN. Welding time and holding time remained constant at 30 cycles. The study revealed that, as the welding current and electrode force increased, the generated heat input increased significantly. The highest tensile-shear load was recorded at 8.71 kN using 11 kA of weld current and 3 kN of electrode force. The physical properties examined the formation of a brittle fracture and several weld defects on the high current welded joint. The increase in weld current also increased the weld diameter. The microstructure analysis revealed no phase transformation on the SS316L interface; instead, the significant grain growth occurred. The phase transformation has occurred on the Ti6Al4V interface. The intermetallic compound layer was also investigated in detail using the EDX (Energy Dispersive X-Ray) and XRD (X-Ray Diffraction) analyses. It was also found that both stainless steel and titanium alloy have their own fusion zone, which is indicated by the highest microhardness value.
    Matched MeSH terms: Physical Phenomena
  6. Fulltext Tensile properties of alkaline treated coconut meat husk reinforced polyester composites
    Muhammad Faiz Ghazali, Mohamad Juraidi Jamal, Syed Azuan Syed Ahmad
    Journal of Engineering and Science Research, 2017;1(1):4-7.
    MyJurnal
    Synthetic fibers such as glass fiber and carbon fiber are traditionally used as reinforcement in engineering composites. The increasing of environmental concerns has led to the use of natural fibers as renewable alternatives reinforcement. Among them, coconut meat husk fiber which abundant availability can be used as reinforcement fiber. However, the coconut meat husk fiber, same as other natural fibers, has the issues of fiber/matrix bonding and moisture absorption. Chemical treatments are needed to modify the surface of fiber, aiming at improving the adhesion with polymer matrix and reducing the hydrophilicity of the fiber. Alkalization was used in this study to treat the coconut meat husk fiber. The effects of chemical treatments for 1hr and 24 hr treatment time on the coconut meat husk fibers reinforced composites were investigated. A result showed that the 24 hr alkali treatment gave the highest tensile stenght compared to the 1hr treatment and RO water.
    Matched MeSH terms: Physical Phenomena
  7. Fulltext Tapered Polymer Fiber Sensors for Reinforced Concrete Beam Vibration Detection
    Luo D, Ibrahim Z, Ma J, Ismail Z, Iseley DT
    Sensors (Basel), 2016 Dec 16;16(12).
    PMID: 27999245 DOI: 10.3390/s16122149
    In this study, tapered polymer fiber sensors (TPFSs) have been employed to detect the vibration of a reinforced concrete beam (RC beam). The sensing principle was based on transmission modes theory. The natural frequency of an RC beam was theoretically analyzed. Experiments were carried out with sensors mounted on the surface or embedded in the RC beam. Vibration detection results agreed well with Kistler accelerometers. The experimental results found that both the accelerometer and TPFS detected the natural frequency function of a vibrated RC beam well. The mode shapes of the RC beam were also found by using the TPFSs. The proposed vibration detection method provides a cost-comparable solution for a structural health monitoring (SHM) system in civil engineering.
    Matched MeSH terms: Physical Phenomena
  8. Fulltext THE PERFORMANCE ANALYSIS OF OPTICAL WAVE PROPAGATION FOR UNDERWATER WIRELESS COMMUNICATION
    MUHAMMAD SAFIY SABRIL, MUHAMMAD SAFIY SABRIL, FAEZAH JASMAN, NURUL ADILAH ABDUL LATIFF, SEVIA MAHDALIZA IDRUS, WAN HAFIZA WAN HASSAN
    UMT Journal of Undergraduate Research, 2020;2(3):73-82.
    MyJurnal
    Underwater wireless communications refer to transmitting data in an unguided water environment by wireless carriers including acoustic, radio frequency (RF), and optical waves. Relative to acoustic and RF, the optical wave is more promising to offer higher bandwidth at a lower energy consumption rate. However, an optical wave has its challenges such as attenuation due to absorption, scattering and turbulence effects. Therefore, this work attempts to investigate the performance of lightwave propagation for underwater optical wireless communication (UOWC) using simulation and experimental approaches. First, the performance of optical waves was analyzed using MATLAB by simulating the light attenuation model which based on depth-dependent chlorophyll concentration. A depth profile that related to the surface chlorophyll levels for the range 0-4 mg/m3 was used to represent the open ocean. The simulation showed that the attenuation of light less affected for operating wavelength range of 450 – 550 nm. Further, an experimental set-up was developed which consists of a transmitter, receiver, and aquarium to emulate the UOWC channel. Three types of water including clear, sea and cloudy were tested to analyze their interaction with the light emitted by a light-emitting diode (LED) and a laser diode. The emitted light detected by the light sensor and the strength of an audio signal transmitted through the UOWC were measured using a light meter and sound meter respectively. The measured power was plotted against distance and the attenuation constant c was deduced through curve fitting method. The analysis showed irrespective of the light sources, UOWC in cloudy water suffered the highest attenuation relative to still clear and seawater. The received power emitted by laser was at least 41% higher than the LED. This study contributes to identify the potential and limitations of different operating schemes to optimize UOWC performance.
    Matched MeSH terms: Physical Phenomena
  9. Synthesis, Structural, Thermal, and Electronic Properties of Palmierite-Related Double Molybdate α-Cs2Pb(MoO4)2
    Solodovnikov SF, Atuchin VV, Solodovnikova ZA, Khyzhun OY, Danylenko MI, Pishchur DP, et al.
    Inorg Chem, 2017 Mar 20;56(6):3276-3286.
    PMID: 28266857 DOI: 10.1021/acs.inorgchem.6b02653
    Cs2Pb(MoO4)2crystals were prepared by crystallization from their own melt, and the crystal structure has been studied in detail. At 296 K, the molybdate crystallizes in the low-temperature α-form and has a monoclinic palmierite-related superstructure (space group C2/m, a = 2.13755(13) nm, b = 1.23123(8) nm, c = 1.68024(10) nm, β = 115.037(2)°, Z = 16) possessing the largest unit cell volume, 4.0066(4) nm3, among lead-containing palmierites. The compound undergoes a distortive phase transition at 635 K and incongruently melts at 943 K. The electronic structure of α-Cs2Pb(MoO4)2was explored by using X-ray emission spectroscopy (XES) and X-ray photoelectron spectroscopy methods. For α-Cs2Pb(MoO4)2, the photoelectron core-level and valence-band spectra and the XES band representing the energy distribution of Mo 4d and O 2p states were recorded. Our results allow one to conclude that the Mo 4d and O 2p states contribute mainly to the central part and at the top of the valence band, respectively, with also significant contributions throughout the whole valence-band region of the molybdate under consideration.
    Matched MeSH terms: Physical Phenomena
  10. Synthesis of iron oxide (Fe304) magnetic nanocrystals by green chemistry approach
    Chiu W, Too S, Daud S, Rashid N, Chia M, Rahman S, et al.
    Sains Malaysiana, 2014;43:941-945.
    In the present study, we report the size distribution study on the iron oxide (Fe304) magnetic nanocrystals (Ncs), which have been synthesized by using green chemistry approach with palm-oil based carboxylic compound (oleic acid) as capping ligands . The Fe304 Ncs were prepared by one pot reaction under non-hydrolytic approach. With the assistance of oleic acid that plays the role as effective capping-ligands , we showed that the Fe304 NCs that are highly monodispersed in size and shape can be synthesized by scrupulously controlling the reaction time. The diameter of Fe304 Ncs can be tuned within the range of 4.0-18.0 nm and exhibit very uniform morphology, which are spherical in shape. Current synthetic approach offers a cheap, environmentally benign and excellent repeatability route in large-scale production of high-quality magnetic Fe304 Ncs if compared to the preceding reports.
    Matched MeSH terms: Physical Phenomena
  11. Fulltext Synthesis of 4-(dimethylamino)pyridine propylthioacetate coated gold nanoparticles and their antibacterial and photophysical activity
    Anwar A, Khalid S, Perveen S, Ahmed S, Siddiqui R, Khan NA, et al.
    J Nanobiotechnology, 2018 Jan 29;16(1):6.
    PMID: 29378569 DOI: 10.1186/s12951-017-0332-z
    BACKGROUND: Gold nanoparticles are useful candidate for drug delivery applications and are associated with enhancement in the bioavailability of coated drugs and/or therapeutic agent. Since, heterocyclic compounds are known to exhibit antimicrobial potential against variety of pathogens, we designed this study to evaluate the antibacterial effects of gold nanoparticles conjugation with new synthesized cationic ligand; 4-Dimethyl aminopyridinium propylthioacetate (DMAP-PTA) in comparison with pure compound and antibiotic drug Pefloxacin. Antibacterial activity of DMAP-PTA coated gold nanoparticles was investigated against a fecal strain of E. coli (ATCC 8739).

    RESULTS: A new dimethyl aminopyridine based stabilizing agent named as DMAP-PTA was synthesized and used for stabilization of gold nanoparticles. Gold nanoparticles coated with DMAP-PTA abbreviated as DMAP-PTA-AuNPs were thoroughly characterized by UV-visible, FT-IR spectroscopic methods and transmission electron microscope before biological assay. DMAP-PTA, DMAP-PTA-AuNPs and Pefloxacin were examined for their antibacterial potential against E. coli, and the minimum inhibitory concentration (MIC) was determined to be 300, 200 and 50 µg/mL respectively. Gold nanoparticles conjugation was found to significantly enhance the antibacterial activity of DMAP-PTA as compared to pure compound. Moreover, effects of DMAP-PTA-AuNPs on the antibacterial potential of Pefloxacin was also evaluated by combination therapy of 1:1 mixture of DMAP-PTA-AuNPs and Pefloxacin against E. coli in a wide range of concentrations from 5 to 300 µg/mL. The MIC of Pefloxacin + DMAP-PTA-AuNPs mixture was found to be 25 µg/mL as compared to Pefloxacin alone (50 µg/mL), which clearly indicates that DMAP-PTA-AuNPs increased the potency of Pefloxacin. AFM analysis was also carried out to show morphological changes occur in bacteria before and after treatment of test samples. Furthermore, DMAP-PTA-AuNPs showed high selectivity towards Pefloxacin in spectrophotometric drug recognition studies which offers tremendous potential for analytical applications.

    CONCLUSIONS: Gold nanoparticles conjugation was shown to enhance the antibacterial efficacy of DMAP-PTA ligand, while DMAP-PTA-AuNPs also induced synergistic effects on the potency of Pefloxacin against E. coli. DMAP-PTA-AuNPs were also developed as Pefloxacin probes in recognizing the drug in blood and water samples in the presence of other drugs.

    Matched MeSH terms: Physical Phenomena*
  12. Fulltext Synergy of the flow behaviour and disperse phase of cellulose nanoparticles in enhancing oil recovery at reservoir condition
    Agi A, Junin R, Arsad A, Abbas A, Gbadamosi A, Azli NB, et al.
    PLoS One, 2019;14(9):e0220778.
    PMID: 31560699 DOI: 10.1371/journal.pone.0220778
    Ascorbic acid was used for the first time to synthesize cellulose nanoparticles (CNP) extracted from okra mucilage. The physical properties of the CNP including their size distribution, and crystalline structures were investigated. The rheological properties of the cellulose nanofluid (CNF) were compared with the bulk okra mucilage and commercial polymer xanthan. The interfacial properties of the CNF at the interface of oil-water (O/W) system were investigated at different concentrations and temperatures. The effects of the interaction between the electrolyte and ultrasonic were determined. Core flooding experiment was conducted at reservoir condition to justify the effect of the flow behaviour and disperse phase behaviour of CNF on additional oil recovery. The performance of the CNF was compared to conventional EOR chemical. The combined method of ultrasonic, weak-acid hydrolysis and nanoprecipitation were effective in producing spherical and polygonal nanoparticles with a mean diameter of 100 nm, increased yield of 51% and preserved crystallinity respectively. The zeta potential result shows that the CNF was stable, and the surface charge signifies long term stability of the fluid when injected into oil field reservoirs. The CNF, okra and xanthan exhibited shear-thinning and pseudoplastic behaviour. The IFT decreased with increase in concentration of CNF, electrolyte and temperature. The pressure drop data confirmed the stability of CNF at 120°C and the formation of oil bank was enough to increase the oil recovery by 20%. CNF was found to be very effective in mobilizing residual oil at high-temperature high-pressure (HTHP) reservoir condition. The energy and cost estimations have shown that investing in ultrasonic-assisted weak-acid hydrolysis is easier, cost-effective, and can reduce energy consumption making the method economically advantageous compared to conventional methods.
    Matched MeSH terms: Physical Phenomena
  13. Fulltext Synchronisation of output voltage waveforms in phase synchronous inverter with LCL filter for smart grid systems
    Tawfikur Rahman, Ibrahimy, M.I., Motakabber, S.M.A.
    Pertanika Journal of Science & Technology, 2017;25(107):145-156.
    MyJurnal
    A new smart grid system is widely used for energy supply system because it is simple, available, low cost, high efficiency and environmentally friendly. Conventionally, inverter techniques are utilised to convert input DC into output AC with the same frequency and phase. This process suffers the same problem which is a higher harmonic distortion, phase synchronisation, lower quality of waveform and long distance, among others. In this paper, three phase synchronous inverters (PSI) were used to direct synchronous PWM control, LCL filter, three phase RLC load, three phase Yg-Delta transformer, 5 km feeder with 2 MW load. PWM was used to generate the pulse signal for synchronisation. However, LCL filters were used to remove the noise in inverter output and transformer output side of the design. A balanced three phase load (10 kVAR) and also the input DC voltage 500 V were considered in this design. Three phase transformer (100kVA/260V/25kV) was used to increase the inverter output voltage and current with the fundamental frequency (50 Hz). The system conversion efficiency was 99.96% and phase synchronous error for each phase was approximately 4.5 degrees.
    Matched MeSH terms: Physical Phenomena
  14. Fulltext Suppression of Excited ϒ States Relative to the Ground State in Pb-Pb Collisions at sqrt[s]_{NN}=5.02  TeV
    Sirunyan AM, Tumasyan A, Adam W, Asilar E, Bergauer T, Brandstetter J, et al.
    Phys Rev Lett, 2018 Apr 06;120(14):142301.
    PMID: 29694144 DOI: 10.1103/PhysRevLett.120.142301
    The relative yields of ϒ mesons produced in pp and Pb-Pb collisions at sqrt[s_{NN}]=5.02  TeV and reconstructed via the dimuon decay channel are measured using data collected by the CMS experiment. Double ratios are formed by comparing the yields of the excited states, ϒ(2S) and ϒ(3S), to the ground state, ϒ(1S), in both Pb-Pb and pp collisions at the same center-of-mass energy. The double ratios, [ϒ(nS)/ϒ(1S)]_{Pb-Pb}/[ϒ(nS)/ϒ(1S)]_{pp}, are measured to be 0.308±0.055(stat)±0.019(syst) for the ϒ(2S) and less than 0.26 at 95% confidence level for the ϒ(3S). No significant ϒ(3S) signal is found in the Pb-Pb data. The double ratios are studied as a function of collision centrality, as well as ϒ transverse momentum and rapidity. No significant dependencies are observed.
    Matched MeSH terms: Physical Phenomena
  15. Fulltext Suitable coating material for microencapsulation of spray-dried fish oil
    Tirgar M, Jinap S, Zaidul IS, Mirhosseini H
    J Food Sci Technol, 2015 Jul;52(7):4441-9.
    PMID: 26139910 DOI: 10.1007/s13197-014-1515-3
    This study was conducted to screen the most suitable coating material for the production of microencapsulated fish oil powder using ternary blends of maltodextrin (15, 25 % w/w), Arabic gum (2.5, 7.5 % w/w), and methylcellulose (0.5, 1.5 % w/w). The physical properties of fish oil emulsion and encapsulated powders were evaluated. Arabic gum (5 % w/w) showed the most significant (p 
    Matched MeSH terms: Physical Phenomena
  16. Suitability estimation for urban development using multi-hazard assessment map
    Bathrellos GD, Skilodimou HD, Chousianitis K, Youssef AM, Pradhan B
    Sci Total Environ, 2017 Jan 01;575:119-134.
    PMID: 27736696 DOI: 10.1016/j.scitotenv.2016.10.025
    Preparation of natural hazards maps are vital and essential for urban development. The main scope of this study is to synthesize natural hazard maps in a single multi-hazard map and thus to identify suitable areas for the urban development. The study area is the drainage basin of Xerias stream (Northeastern Peloponnesus, Greece) that has frequently suffered damages from landslides, floods and earthquakes. Landslide, flood and seismic hazard assessment maps were separately generated and further combined by applying the Analytical Hierarchy Process (AHP) and utilizing a Geographical Information System (GIS) to produce a multi-hazard map. This map represents the potential suitability map for urban development in the study area and was evaluated by means of uncertainty analysis. The outcome revealed that the most suitable areas are distributed in the southern part of the study area, where the landslide, flood and seismic hazards are at low and very low level. The uncertainty analysis shows small differences on the spatial distribution of the suitability zones. The produced suitability map for urban development proves a satisfactory agreement between the suitability zones and the landslide and flood phenomena that have affected the study area. Finally, 40% of the existing urban pattern boundaries and 60% of the current road network are located within the limits of low and very low suitability zones.
    Matched MeSH terms: Physical Phenomena
  17. Substrate docking and molecular dynamic simulation for prediction of fungal enzymes from Trichoderma species-assisted extraction of nanocellulose from oil palm leaves
    Bahaman AH, Abdul Wahab R, Hamid AAA, Halim KBA, Kaya Y, Edbeib MF
    J Biomol Struct Dyn, 2020 Sep;38(14):4246-4258.
    PMID: 31608812 DOI: 10.1080/07391102.2019.1679667
    Fungi of the Trichoderma species are valued industrial enzymes in support of the 'zero-waste' technology to convert agro-industrial biomass into valuable products, i.e. nanocellulose (NC). In this study, an in silico approach using substrate docking and molecular dynamic (MD) simulation was used to predict the order of which the multilayers of cellulosic polymers, i.e. lignin, hemicellulose and cellulose in oil palm leaves (OPL) are degraded by fungal enzymes, endocellulase and exocellulase. The study aimed to establish the catalytic tendencies of the enzymes to optimally degrade the cellulosic components of OPL for high yield production of NC. Energy minimized endocellulase and exocellulase models revealed satisfactory scores of PROCHECK (90.0% and 91.2%), Verify3D (97.23% and 98.85%) and ERRAT (95.24% and 91.00%) assessments. Active site prediction by blind docking, COACH meta-server and multiple sequence alignment indicated the catalytic triads for endocellulase and exocellulase were Ser116-His205-Glu249 and Ser382-Arg124-Asp385, respectively. Binding energy of endocellulase docked with hemicellulose (-6.0   kcal mol-1) was the most favourable followed by lignin (-5.6   kcal mol-1) and cellulose (-4.4   kcal mol-1). Exocellulase, contrarily, bonded favorably with lignin (-8.7   kcal mol-1), closely followed by cellulose (-8.5   kcal mol-1) and hemicellulose (-8.4   kcal mol-1). MDs simulations showed that interactions of complexes, endocellulase-hemicellulose and the exocellulase-cellulose being the most stable. Thus, the findings of the study successfully identified the specific actions of sugar-acting enzymes for NC production. Communicated by Ramaswamy H. Sarma.
    Matched MeSH terms: Physical Phenomena
  18. Sub kGy photon irradiation alterations in graphite
    Bradley DA, Nawi SNM, Khandaker MU, Almugren KS, Sani SFA
    Appl Radiat Isot, 2020 Jul;161:109168.
    PMID: 32321700 DOI: 10.1016/j.apradiso.2020.109168
    Present work concerns polymer pencil-lead graphite (PPLG) and the potential use of these in elucidating irradiation-driven structural alterations. The study provides detailed analysis of radiation-induced structural interaction changes and the associated luminescence that originates from the energy absorption. Thermally stimulated emission from the different occupied defect energy levels reflects the received radiation dose, different for the different diameter PPLGs. The PPLG samples have been exposed to photon irradiation, specifically x-ray doses ranging from 1 to 10 Gy, extended to 30-200 Gy through use of a60Co gamma-ray source. Trapping parameters such as order of kinetics, activation energy and frequency factor are estimated using Chen's peak-shape method for a fixed-dose of 30 Gy. X-ray diffractometry was used to characterize the crystal structure of the PPLG, the aim being to identify the degree of structural order, atomic spacing and lattice constants of the various irradiated PPLG samples. The mean atomic spacing and degree of structural order for the different diameter PPLG are found to be 0.3332 nm and 26.6° respectively. Photoluminescence spectra from PPLG arising from diode laser excitation at 532 nm consist of two adjacent peaks, 602 nm (absorption) and 1074 nm (emission), with mean energy band gap values within the range 1.113-1.133 eV.
    Matched MeSH terms: Physical Phenomena
  19. Study of vector boson scattering and search for new physics in events with two same-sign leptons and two jets
    Khachatryan V, Sirunyan AM, Tumasyan A, Adam W, Bergauer T, Dragicevic M, et al.
    Phys Rev Lett, 2015 Feb 6;114(5):051801.
    PMID: 25699433
    A study of vector boson scattering in pp collisions at a center-of-mass energy of 8 TeV is presented. The data sample corresponds to an integrated luminosity of 19.4  fb(-1) collected with the CMS detector. Candidate events are selected with exactly two leptons of the same charge, two jets with large rapidity separation and high dijet mass, and moderate missing transverse energy. The signal region is expected to be dominated by electroweak same-sign W-boson pair production. The observation agrees with the standard model prediction. The observed significance is 2.0 standard deviations, where a significance of 3.1 standard deviations is expected based on the standard model. Cross section measurements for W(±)W(±) and WZ processes in the fiducial region are reported. Bounds on the structure of quartic vector-boson interactions are given in the framework of dimension-eight effective field theory operators, as well as limits on the production of doubly charged Higgs bosons.
    Matched MeSH terms: Physical Phenomena; Biophysical Phenomena
  20. Study of Jet Quenching with Z+jet Correlations in Pb-Pb and pp Collisions at sqrt[s]_{NN}=5.02  TeV
    Sirunyan AM, Tumasyan A, Adam W, Asilar E, Bergauer T, Brandstetter J, et al.
    Phys Rev Lett, 2017 Aug 25;119(8):082301.
    PMID: 28952777 DOI: 10.1103/PhysRevLett.119.082301
    The production of jets in association with Z bosons, reconstructed via the μ^{+}μ^{-} and e^{+}e^{-} decay channels, is studied in pp and, for the first time, in Pb-Pb collisions. Both data samples were collected by the CMS experiment at the LHC, at a nucleon-nucleon center-of-mass energy of 5.02 TeV. The Pb-Pb collisions were analyzed in the 0%-30% centrality range. The back-to-back azimuthal alignment was studied in both pp and Pb-Pb collisions for Z bosons with transverse momentum p_{T}^{Z}>60  GeV/c and a recoiling jet with p_{T}^{jet}>30  GeV/c. The p_{T} imbalance x_{jZ}=p_{T}^{jet}/p_{T}^{Z}, as well as the average number of jet partners per Z, R_{jZ}, was studied in intervals of p_{T}^{Z}. The R_{jZ} is found to be smaller in Pb-Pb than in pp collisions, which suggests that in Pb-Pb collisions a larger fraction of partons associated with the Z bosons fall below the 30  GeV/c p_{T}^{jet} threshold because they lose energy.
    Matched MeSH terms: Physical Phenomena
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