Browse publications by year: 2013

  1. Sam IC, Shaw R, Chan YF, Hooi PS, Hurt AC, Barr IG
    J Med Virol, 2013 Aug;85(8):1420-5.
    PMID: 23765779 DOI: 10.1002/jmv.23622
    Relatively little is known about the burden of influenza in tropical countries. The seroprevalence of pandemic influenza A (H1N1) 2009, seasonal H1N1 and H3N2 was determined in Kuala Lumpur, Malaysia. Pre- and post-pandemic residual laboratory sera were tested by hemagglutination-inhibition. The seroprevalence of A(H1N1)pdm09 increased from 3.7% pre-pandemic to 21.9% post-pandemic, giving an overall cumulative incidence of 18.1% (95% CI, 13.8-22.5%), mainly due to increases in those <5, 5-17, and 18-29 years old. In contrast with findings from USA, Europe, and Australia, pre-existing seroprevalence to A(H1N1)pdm09 was low at 5.6% in the elderly age group of >55 years. A(H1N1)pdm09 affected almost a third of those <30 years in Kuala Lumpur. Pre-pandemic seroprevalence was 14.7% for seasonal H1N1 and 21.0% for H3N2, and these rates did not change significantly after the pandemic. Seasonal and pandemic influenza cause a considerable burden in tropical Malaysia, particularly in children and young adults.
    MeSH terms: Adolescent; Adult; Aged; Aged, 80 and over; Antibodies, Viral/blood; Child; Child, Preschool; Female; Hemagglutination Inhibition Tests; Humans; Infant; Influenza, Human/epidemiology*; Malaysia/epidemiology; Male; Middle Aged; Incidence; Seroepidemiologic Studies; Influenza A Virus, H1N1 Subtype/immunology; Influenza A Virus, H3N2 Subtype/immunology; Young Adult
  2. Mz IS, Teh LK, Salleh MZ
    Genome Announc, 2013;1(3).
    PMID: 23766409 DOI: 10.1128/genomeA.00351-13
    Streptococcus agalactiae (group B streptococcus [GBS]) is a Gram-positive bacterium that was first recognized as a causative agent of bovine mastitis. S. agalactiae has subsequently emerged as a significant cause of human diseases. Here, we report the draft genome sequence of S. agalactiae PR06, which was isolated from a septicemic patient in a local hospital in Malaysia.
    MeSH terms: Animals; Base Sequence; Cattle; Chromosome Mapping; Female; Gram-Positive Bacteria; Humans; Malaysia; Mastitis, Bovine; Streptococcal Infections; Streptococcus agalactiae
  3. Ram S, Narayanasamy R, Barua A
    Indian J Palliat Care, 2013 Jan;19(1):34-9.
    PMID: 23766593 DOI: 10.4103/0973-1075.110234
    BACKGROUND: The psychological stress after diagnosis of breast cancer is often severe. Most of the women with breast cancer and their families suffer from emotional, social, financial and psychological disturbances.

    MATERIALS AND METHODS: A cluster non-randomized trial was conducted at a Cancer Society in Melaka, Malaysia to assess the effectiveness of psycho-education on well-being status and depression among breast cancer patients. The study period was for one month (11(th) June 2011 and 16(th) July 2011). Participants in this study were 34 adult women suffering from non-metastatic breast cancer and on appropriate allopathic medication. The WHO-five Well-being Index (1998 version) was used as the screening instrument for the assessment of well-being and depression. The data collected were tabulated and analyzed by using the Statistical Package for Social Sciences (SPSS) version 11.0. Wilcoxon Signed-rank Test was applied for comparison between pre-test and post-test scores. A P value <0.05 was considered as statistically significant.

    RESULTS: This study revealed that majority of the participants was in the state of adequate well-being after the psycho-education 33 (97.1%). The proportion of depressed individuals had also reduced from 8 (23.5%) to 1 (2.9%) after the psychological intervention. The post-test results significantly improved after the intervention for the items related to "I have felt calm and relaxed", "I woke up feeling fresh and rested" and "my daily life has been filled with things that interest me" along with the "overall impression" in the WHO-5 Well-being Index.

    CONCLUSION: Group psycho-education played a significant role in improving the well-being status and reducing depression of breast cancer survivors.

  4. Yaacob JS, Taha RM, Khorasani Esmaeili A
    ScientificWorldJournal, 2013;2013:686752.
    PMID: 23766703 DOI: 10.1155/2013/686752
    The present study deals with the cytological investigations on the meristematic root cells of carnation (Dianthus caryophyllus Linn.) grown in vivo and in vitro. Cellular parameters including the mitotic index (MI), chromosome count, ploidy level (nuclear DNA content), mean cell and nuclear areas, and cell doubling time (Cdt) were determined from the 2 mm root tip segments of this species. The MI value decreased when cells were transferred from in vivo to in vitro conditions, perhaps due to early adaptations of the cells to the in vitro environment. The mean chromosome number was generally stable (2n = 2x = 30) throughout the 6-month culture period, indicating no occurrence of early somaclonal variation. Following the transfer to the in vitro environment, a significant increase was recorded for mean cell and nuclear areas, from 26.59 ± 0.09  μm² to 35.66 ± 0.10  μm² and 142.90 ± 0.59  μm² to 165.05 ± 0.58  μm², respectively. However, the mean cell and nuclear areas of in vitro grown D. caryophyllus were unstable and fluctuated throughout the tissue culture period, possibly due to organogenesis or rhizogenesis. Ploidy level analysis revealed that D. caryophyllus root cells contained high percentage of polyploid cells when grown in vivo and maintained high throughout the 6-month culture period.
    MeSH terms: Cells, Cultured; Genetic Variation/genetics*; Plant Roots/cytology; Plant Roots/genetics*; Plant Roots/growth & development*; Dianthus/cytology; Dianthus/genetics*; Dianthus/growth & development*; Tissue Culture Techniques/methods*
  5. Alwee R, Shamsuddin SM, Sallehuddin R
    ScientificWorldJournal, 2013;2013:951475.
    PMID: 23766729 DOI: 10.1155/2013/951475
    Crimes forecasting is an important area in the field of criminology. Linear models, such as regression and econometric models, are commonly applied in crime forecasting. However, in real crimes data, it is common that the data consists of both linear and nonlinear components. A single model may not be sufficient to identify all the characteristics of the data. The purpose of this study is to introduce a hybrid model that combines support vector regression (SVR) and autoregressive integrated moving average (ARIMA) to be applied in crime rates forecasting. SVR is very robust with small training data and high-dimensional problem. Meanwhile, ARIMA has the ability to model several types of time series. However, the accuracy of the SVR model depends on values of its parameters, while ARIMA is not robust to be applied to small data sets. Therefore, to overcome this problem, particle swarm optimization is used to estimate the parameters of the SVR and ARIMA models. The proposed hybrid model is used to forecast the property crime rates of the United State based on economic indicators. The experimental results show that the proposed hybrid model is able to produce more accurate forecasting results as compared to the individual models.
    MeSH terms: Computer Simulation; Crime/trends*; Crime/statistics & numerical data*; Forecasting*; Malaysia; Regression Analysis; Models, Statistical*; Systems Integration; Models, Economic*; Support Vector Machine*
  6. Nik Yusoff NS, Mustapha Z, Govindasamy C, Sirajudeen KN
    Oxid Med Cell Longev, 2013;2013:927214.
    PMID: 23766863 DOI: 10.1155/2013/927214
    Hypertension is a risk factor for several cardiovascular diseases and oxidative stress suggested to be involved in the pathophysiology. Antihypertensive drug Clonidine action in ameliorating oxidative stress was not well studied. Therefore, this study investigate the effect of Clonidine on oxidative stress markers and nitric oxide (NO) in SHR and nitric oxide synthase inhibitor, N-nitro-L-arginine methyl ester (L-NAME) administered SHR. Male rats were divided into four groups [SHR, SHR+Clonidine (SHR-C), SHR+L-NAME, SHR+Clonidine+L-NAME(SHRC+L-NAME)]. Rats (SHRC) were administered with Clonidine (0.5 mg kg(-1) day(-1)) from 4 weeks to 28 weeks in drinking water and L-NAME (25 mg kg(-1) day(-1)) from 16 weeks to 28 weeks to SHRC+L-NAME. Systolic blood pressure (SBP) was measured. At the end of 28 weeks, all rats were sacrificed and in their heart homogenate, oxidative stress parameters and NO was assessed. Clonidine treatment significantly enhanced the total antioxidant status (TAS) (P < 0.001) and reduced the thibarbituric acid reactive substances (TBARS) (P < 0.001) and protein carbonyl content (PCO) (P < 0.05). These data suggest that oxidative stress is involved in the hypertensive organ damage and Clonidine not only lowers the SBP but also ameliorated the oxidative stress in the heart of SHR and SHR+L-NAME.
    MeSH terms: Animals; Antihypertensive Agents/administration & dosage; Antihypertensive Agents/pharmacology*; Antihypertensive Agents/therapeutic use; Antioxidants/metabolism; Blood Pressure/drug effects; Clonidine/administration & dosage; Clonidine/pharmacology*; Clonidine/therapeutic use*; Heart/drug effects*; Heart/physiopathology; Hypertension/drug therapy*; Hypertension/physiopathology; Male; Nitric Oxide/metabolism; Rats, Inbred SHR; Biomarkers/metabolism*; Thiobarbituric Acid Reactive Substances/metabolism; Oxidative Stress/drug effects*; NG-Nitroarginine Methyl Ester/administration & dosage; NG-Nitroarginine Methyl Ester/pharmacology; NG-Nitroarginine Methyl Ester/therapeutic use; Protein Carbonylation/drug effects; Rats
  7. Iqbal MS, Bahari MB, Darwis Y, Iqbal MZ, Hayat A, Venkatesh G
    J AOAC Int, 2013 6 19;96(2):290-4.
    PMID: 23767352
    A simple and selective RP-HPLC-UV method with SPE was developed and validated for the quantification of cefotaxime in all-in-one total parenteral nutrition (AIO-TPN) admixtures. Chromatographic separation was achieved on a 5 pm particle size C18 DB column (250 x 4.6 mm id) using the mobile phase ammonium acetate (25 mM, pH 4.0)-50% acetonitrile in methanol (80 + 20, v/v). The flow rate was 0.9 mL/min and the detection wavelength was 254 nm. The analyte was extracted from AIO-TPN admixtures by means of an SPE method. The cefotaxime calibration curve was linear over a concentration range of 100-1400 microg/mL with a correlation coefficient of > or = 0.9994. The intraday accuracy and precision for cefotaxime were < or = -3.15 and < or = 3.08%, respectively, whereas the interday accuracy and precision were < or = -2.48 and < or = 2.25%, respectively. The method was successfully applied to stability studies of cefotaxime in the presence of micronutrients together with low and high concentrations of macronutrients in AIO-TPN admixtures. Cefotaxime was degraded by 13.00 and 26.05% at room temperature (25 +/- 2 degrees C) after 72 h in low and high macronutrient concentration formulations of AIO-TPN admixtures, respectively. The values of cefotaxime degradation rates for low and high macronutrient concentration formulations of AIO-TPN admixtures were -0.164 and -0.353, respectively. These results indicated that there was a higher rate of degradation in the AIO-TPN admixture formulations containing high concentrations of macronutrients.
    MeSH terms: Anti-Bacterial Agents/chemistry*; Caffeine/chemistry; Cefotaxime/chemistry*; Chromatography, High Pressure Liquid/methods*; Food Analysis/methods; Food Analysis/standards; Parenteral Nutrition, Total*; Molecular Structure; Solid Phase Extraction/methods*; Solid Phase Extraction/standards*
  8. Al-Qubaisi M, Rosli R, Subramani T, Omar AR, Yeap SK, Ali AM, et al.
    Nat Prod Res, 2013;27(23):2216-8.
    PMID: 23767409 DOI: 10.1080/14786419.2013.800979
    Goniothalamin is a biologically active styrylpyrone derivative isolated from various Goniothalamus species. The ability of goniothalamin to induce apoptosis via caspase-3 activation against hepatoblastoma (HepG2) and normal liver cells (Chang cells) was studied using morphological and biochemical evaluations. HepG2 and Chang cells were treated with goniothalamin for 72 h and analysed by TUNEL and Annexin-V/PI staining. Furthermore, the post-mitochondrial caspase-3 was quantified using ELISA. In view of our results, goniothalamin induced apoptosis on treated cells via alteration of cellular membrane integrity and cleavage of DNA. On the other hand, post-mitochondrial caspase-3 activity was significantly elevated in HepG2 cells treated with goniothalamin after 72 h. These findings suggest that goniothalamin induced apoptosis on HepG2 liver cancer cells via induction of caspase-3 with less sensitivity on the cell line of Chang cells.
    MeSH terms: Cells, Cultured; Enzyme Activation; Enzyme-Linked Immunosorbent Assay; Flow Cytometry; Humans; Liver Neoplasms/enzymology; Liver Neoplasms/pathology*; Pyrones/pharmacology*; Apoptosis/drug effects*; Hepatoblastoma/enzymology; Hepatoblastoma/pathology*; In Situ Nick-End Labeling; Caspase 3/metabolism*; Hep G2 Cells
  9. Tay BA
    PMID: 23767497
    We study the reduced dynamics of a pair of nondegenerate oscillators coupled collectively to a thermal bath. The model is related to the trilinear boson model where the idler mode is promoted to a field. Due to nonlinear coupling, the Markovian master equation for the pair of oscillators admits non-Gaussian equilibrium states, where the modes distribute according to the Bose-Einstein statistics. These states are metastable before the nonlinear coupling is taken over by linear coupling between the individual oscillators and the field. The Gibbs state for the individual modes lies in the subspace with infinite occupation quantum number. We present the time evolution of a few states to illustrate the behaviors of the system.
    MeSH terms: Computer Simulation; Hot Temperature*; Oscillometry/methods*; Thermodynamics*; Models, Statistical*
  10. Kamarulzaman A
    Lancet, 2013 Jun 15;381(9883):2058-60.
    PMID: 23769216 DOI: 10.1016/S0140-6736(13)61033-8
    MeSH terms: Africa, Northern/epidemiology; Culture; Humans; Islam*; Malaysia; Middle East/epidemiology; HIV Infections/ethnology; HIV Infections/epidemiology*; HIV Infections/prevention & control
  11. Shetty P
    Lancet, 2013 Jun 15;381(9883):2073.
    PMID: 23769222 DOI: 10.1016/S0140-6736(13)61231-3
    MeSH terms: Female; Humans; Legislation, Drug; Malaysia/epidemiology; Male; Street Drugs/legislation & jurisprudence; HIV Infections/complications; HIV Infections/epidemiology; HIV Infections/prevention & control*; Substance Abuse, Intravenous/complications; Needle-Exchange Programs; History, 20th Century; History, 21st Century
  12. Tan YC, Yeoh KA, Wong MY, Ho CL
    J Plant Physiol, 2013 Nov 01;170(16):1455-60.
    PMID: 23769496 DOI: 10.1016/j.jplph.2013.05.009
    Basal stem rot (BSR) is a major disease of oil palm caused by a pathogenic fungus, Ganoderma boninense. However, the interaction between the host plant and its pathogen is not well characterized. To better understand the response of oil palm to G. boninense, transcript profiles of eleven putative defence-related genes from oil palm were measured by quantitative reverse-transcription (qRT)-PCR in the roots of oil palms treated with G. boninense from 3 to 12 weeks post infection (wpi). These transcripts encode putative Bowman-Birk serine protease inhibitors (EgBBI1 and 2), defensin (EgDFS), dehydrin (EgDHN), early methionine-labeled polypeptides (EgEMLP1 and 2), glycine-rich RNA binding protein (EgGRRBP), isoflavone reductase (EgIFR), metallothionein-like protein (EgMT), pathogenesis-related-1 protein (EgPRP), and type 2 ribosome-inactivating protein (EgT2RIP). The transcript abundance of EgBBI2 increased in G. boninense-treated roots at 3 and 6wpi compared to those of controls; while the transcript abundance of EgBBI1, EgDFS, EgEMLP1, EgMT, and EgT2RIP increased in G. boninense-treated roots at 6 or 12wpi. Meanwhile, the gene expression of EgDHN was up-regulated at all three time points in G. boninense-treated roots. The expression profiles of the eleven transcripts were also studied in leaf samples upon inoculation of G. boninense and Trichoderma harzianum to identify potential biomarkers for early detection of BSR. Two candidate genes (EgEMLP1 and EgMT) that have different profiles in G. boninense-treated leaves compared to those infected by T. harzianum may have the potential to be developed as biomarkers for early detection of G. boninense infection.
    MeSH terms: Plant Diseases/immunology*; Plant Diseases/microbiology; Plant Proteins/genetics*; Plant Proteins/metabolism; Trichoderma/physiology; Sequence Analysis, DNA; DNA, Complementary/genetics; DNA, Complementary/metabolism; Plant Leaves/genetics; Plant Leaves/metabolism; Plant Roots/genetics; Plant Roots/metabolism; Arecaceae/genetics*; Arecaceae/metabolism; Arecaceae/microbiology*; Ganoderma/physiology; Transcriptome*
  13. Lee YJ, Zakaria R, Manaf ZA, Mohamed Z, Lee YY
    Chin Med J (Engl), 2013;126(11):2049-53.
    PMID: 23769556
    There is increasing evidence that CT pulmonary arteriography and venography allow a better diagnostic yield for deep vein thrombosis (DVT) in suspected acute pulmonary embolism (PE). The aim was to investigate the value for using such an approach in a multiracial Asian population.
    MeSH terms: Adult; Aged; Female; Humans; Male; Middle Aged; Pulmonary Artery/radiography*; Pulmonary Embolism/radiography; Pulmonary Veins/radiography*; Tomography, X-Ray Computed/methods*; Venous Thrombosis/radiography; Venous Thromboembolism/radiography*
  14. Amid M, Abdul Manap MY, Mustafa S
    PMID: 23770734 DOI: 10.1016/j.jchromb.2013.05.009
    As a novel method of purification, an aqueous organic phase system (AOPS) was employed to purify pectinase from mango waste. The effect of different parameters, such as the alcohol concentration (ethanol, 1-propanol, and 2-propanol), the salt type and concentration (ammonium sulfate, potassium phosphate and sodium citrate), the feed stock crude load, the aqueous phase pH and NaCl concentration, were investigated in the recovery of pectinase from mango peel. The partition coefficient (K), selectivity (S), purification factor (PF) and yield (Y, %) were investigated in this study as important parameters for the evaluation of enzyme recovery. The desirable partition efficiency for pectinase purification was achieved in an AOPS of 19% (w/w) ethanol and 22% (w/w) potassium phosphate in the presence of 5% (w/w) NaCl at pH 7.0. Based on the system, the purification factor of pectinase was enhanced 11.7, with a high yield of 97.1%.
    MeSH terms: Ethanol; Analysis of Variance; Biotechnology; Electrophoresis, Polyacrylamide Gel; Fruit/enzymology*; Fruit/chemistry; Hydrogen-Ion Concentration; Phosphates; Polygalacturonase/analysis; Polygalacturonase/isolation & purification*; Polygalacturonase/metabolism; Polygalacturonase/chemistry; Sodium Chloride; Potassium Compounds; Mangifera/enzymology*; Mangifera/chemistry; Solid Waste
  15. Thoo YY, Ho SK, Abas F, Lai OM, Ho CW, Tan CP
    Molecules, 2013 Jun 14;18(6):7004-22.
    PMID: 23771061 DOI: 10.3390/molecules18067004
    Antioxidants have been widely used in the food industry to enhance product quality by preventing oxidation of susceptible substances. This work was carried out to maximise the recovery of total phenolic content (TPC), total flavonoid content (TFC), 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) (ABTS) radical-scavenging capacity and 2,2'-diphenyl-1-picrylhydrazyl (DPPH) radical-scavenging capacity from Morinda citrifolia fruit via modification of the ethanol concentration, extraction time and extraction temperature at minimal processing cost. The optimised conditions yielded values of 881.57 ± 17.74 mg GAE/100 g DW for TPC, 552.53 ± 34.16 mg CE/100 g DW for TFC, 799.20 ± 2.97 µmol TEAC/100 g DW for ABTS and 2,317.01 ± 18.13 µmol TEAC/100 g DW for DPPH were 75% ethanol, 40 min of time and 57 °C. The four responses did not differ significantly (p > 0.05) from predicted values, indicating that models obtained are suitable to the optimisation of extraction conditions for phenolics from M. citrifolia. The relative amounts of flavonoids were 0.784 ± 0.01 mg quercetin/g of extract and 1.021 ± 0.04 mg rutin/g of extract. On the basis of the results obtained, M. citrifolia extract can be used as a valuable bioactive source of natural antioxidants.
    MeSH terms: Ethanol/chemistry; Antioxidants/chemistry*; Fruit/chemistry*; Phenols/chemistry*; Plant Extracts/chemistry*; Quercetin/chemistry; Rutin/chemistry; Solvents; Temperature; Time Factors; Free Radical Scavengers/chemistry; Morinda/chemistry*
  16. Gopalai AA, Lim SY, Aziz ZA, Lim SK, Tan LP, Chong YB, et al.
    Ann Acad Med Singap, 2013 May;42(5):237-40.
    PMID: 23771111
    INTRODUCTION: The G2385R and R1628P LRRK2 gene variants have been associated with an increased risk of Parkinson's disease (PD) in the Asian population. Recently, a new LRRK2 gene variant, A419V, was reported to be a third risk variant for PD in Asian patients. Our objective was to investigate this finding in our cohort of Asian subjects.

    MATERIALS AND METHODS: Eight hundred and twenty-eight subjects (404 PD patients, and 424 age and gender-matched control subjects without neurological disorders) were recruited. Genotyping was done by Taqman® allelic discrimination assay on an Applied Biosystems 7500 Fast Real-Time PCR machine.

    RESULTS: The heterozygous A419V genotype was found in only 1 patient with PD, compared to 3 in the control group (0.4% vs 1.3%), giving an odds ratio of 0.35 (95% confidence interval (CI), 0.01 to 3.79; P = 0.624).

    CONCLUSION: A419V is not an important LRRK2 risk variant in our Asian cohort of patients with PD. Our data are further supported by a literature review which showed that 4 out of 6 published studies reported a negative association of this variant in PD.

    MeSH terms: Adolescent; Adult; Aged; Aged, 80 and over; Alanine/genetics*; China/ethnology; Cytosine; Female; Gene Frequency; Genotype; Heterozygote; Humans; India/ethnology; Malaysia/ethnology; Male; Middle Aged; Parkinson Disease/genetics*; Polymorphism, Genetic/genetics; Risk Factors; Singapore; Thymine; Valine/genetics*; Genetic Variation/genetics*; Cohort Studies; Case-Control Studies; Protein-Serine-Threonine Kinases/genetics*; Young Adult; Leucine-Rich Repeat Serine-Threonine Protein Kinase-2
  17. Abdul Rahman Z, Hamzah SH, Hassan SA, Osman S, Md Noor SS
    J Infect Dev Ctries, 2013 Jun;7(6):448-52.
    PMID: 23771288 DOI: 10.3855/jidc.2535
    INTRODUCTION: Coagulase-negative staphylococci (CoNS) are a group of micro-organisms that are increasingly implicated as a cause of significant infection and the leading cause of bloodstream infection (BSI). One important predictor of true BSI is the isolation of CoNS from multiple blood cultures, presuming that the isolates represent the same species. Thus the objective of this study was to determine the significance of repeated CoNS isolated from blood cultures.
    METHODOLOGY: This was a prospective laboratory study which was initiated in June 2007 and lasted until July 2008. CoNS isolates were obtained from patients who had two positive blood cultures within a 14-day interval. CoNS were identified to the species level using an API-Staph, and antibiotics susceptibility testing was performed according to Clinical and Laboratory Standards Institute specifications. Strain relatedness was confirmed using pulsed-field gel electrophoresis.
    RESULTS: During the study period, 202 CoNS-positive samples were isolated from 101 patients. The most common species isolated was Staphylococcus epidermidis (59.0%), and 83.2% of the patients isolated the same species of CoNS from repeated blood cultures. Among the isolates of the same species, only 40.7% had the same antibiogram. CoNS with the same species and antibiogram had 93.3% probability of belonging to the same strain. Most (65.5%) of the patients were treated with antibiotics, primarily from the glycopeptides group.
    CONCLUSION: Speciation and antibiogram of CoNS from repeated blood cultures are adequate in determining the significance of repeated CoNS isolated from blood cultures.
    MeSH terms: Adult; Coagulase/deficiency*; Developing Countries; Humans; Infant; Infant, Newborn; Malaysia/epidemiology; Microbial Sensitivity Tests; Prospective Studies; Staphylococcal Infections/microbiology; Staphylococcal Infections/epidemiology*; Staphylococcus/classification; Staphylococcus/genetics; Staphylococcus/isolation & purification*; Staphylococcus/physiology; Bacterial Typing Techniques; Bacteremia/microbiology; Bacteremia/epidemiology*; Electrophoresis, Gel, Pulsed-Field; Molecular Typing
  18. Ahmed F, Urooj A, Karim AA
    Pharmacogn Mag, 2013 Apr;9(34):130-4.
    PMID: 23772108 DOI: 10.4103/0973-1296.111265
    BACKGROUND: Ficus racemosa Linn. (Moraceae) bark is a rich source of phenolic compounds known to possess potential antioxidant activity offering numerous health benefits.

    MATERIALS AND METHODS: The present study evaluated the protective effects of sequential acetone extract of Ficus racemosa bark at two doses (FR250; 250 mg kg(-1) and FR500; 500 mg kg(-1) p.o.) against doxorubicin-induced renal and testicular toxicity in rats.

    RESULTS: Doxorubicin administration resulted in significant decrease (P ≤ 0.05) in total protein and glutathione concentrations, while increased (P ≤ 0.05) serum urea, creatinine and thiobarbituric acid reactive substances (TBARS). Extract pretreatment restored biochemical parameters toward normalization. FR250 and FR500 decreased serum creatinine levels by 22.5% and 44%, while serum urea levels were decreased by 30.4% and 58.8%, respectively. Extract pretreatment (500 mg kg(-1)) decreased TBARS and increased glutathione levels in the kidney and testis to control levels. These observations were substantiated by histopathological studies, wherein normal renal and testicular architecture was restored in FR500 group.

    CONCLUSION: Doxorubicin exposure results in pronounced oxidative stress, and administration of F. racemosa stem bark extract offers significant renal and testicular protection by inhibiting lipidperoxidation-mediated through scavenging free radicals.

  19. Ismail NA, Kasim MM, Noor Aizuddin A, Umar NA
    Gynecol Endocrinol, 2013 Jul;29(7):691-4.
    PMID: 23772780 DOI: 10.3109/09513590.2013.797398
    OBJECTIVE: This was to determine HOMA-IR score as well as to assess its association in fetal and maternal outcomes among pregnant women with diabetes risks.
    METHODS: A prospective cohort study of pregnant women with diabetes risks was done. GDM was diagnosed using modified glucose tolerance test. Serum insulin was taken and measured by an electrochemiluminescence immunoassay method. Plasma glucose was measured by enzymatic reference method with hexokinase. HOMA-IR score was calculated for each patient. Maternal and fetal outcomes were analyzed.
    RESULTS: From 279 women recruited, 22.6% had GDM with higher HOMA-IR score (4.07 ± 2.44 versus 2.08 ± 1.12; p = 0.001) and fasting insulin (16.76 ± 8.63 µIU/L versus 10.15 ± 5.07 µIU/L; p = 0.001). Area under ROC curve for HOMA-IR score was 0.79 (95% confidence interval, 0.74-0.84) with optimum cut-off value of 2.92 (sensitivity = 63.5%; specificity = 89.8%), higher than recommended by IDF (2.38). This point showed significant association with neonatal hypoglycemia (p = 0.02) and Cesarean section (p = 0.04) in GDM mothers.
    CONCLUSIONS: HOMA-IR score and insulin resistance levels were higher in GDM women in our population. With the cut-off HOMA-IR value of 2.92, neonatal hypoglycemia and Cesarean section were significant complications in GDM mothers. This can be used in anticipation of maternal and fetal morbidities.
    MeSH terms: Adult; Female; Health Status Indicators*; Homeostasis/physiology*; Humans; Insulin Resistance/physiology*; Pregnancy; Pregnancy Outcome/epidemiology; Prognosis; Sensitivity and Specificity; Cohort Studies; Diabetes, Gestational/diagnosis*; Diabetes, Gestational/metabolism; Diabetes, Gestational/epidemiology
  20. Tripathi BM, Kim M, Lai-Hoe A, Shukor NA, Rahim RA, Go R, et al.
    FEMS Microbiol Ecol, 2013 Nov;86(2):303-11.
    PMID: 23773164 DOI: 10.1111/1574-6941.12163
    Little is known of the factors influencing soil archaeal community diversity and composition in the tropics. We sampled soils across a range of forest and nonforest environments in the equatorial tropics of Malaysia, covering a wide range of pH values. DNA was PCR-amplified for the V1-V3 region of the 16S rRNA gene, and 454-pyrosequenced. Soil pH was the best predictor of diversity and community composition of Archaea, being a stronger predictor than land use. Archaeal OTU richness was highest in the most acidic soils. Overall archaeal abundance in tropical soils (determined by qPCR) also decreased at higher pH. This contrasts with the opposite trend previously found in temperate soils. Thaumarcheota group 1.1b was more abundant in alkaline soils, whereas group 1.1c was only detected in acidic soils. These results parallel those found in previous studies in cooler climates, emphasizing niche conservatism among broad archaeal groups. Among the most abundant operational taxonomic units (OTUs), there was clear evidence of niche partitioning by pH. No individual OTU occurred across the entire range of pH values. Overall, the results of this study show that pH plays a major role in structuring tropical soil archaeal communities.
    MeSH terms: Archaea/classification*; Archaea/genetics; Archaea/isolation & purification; Hydrogen-Ion Concentration; Malaysia; RNA, Ribosomal, 16S/genetics; Soil/chemistry; Soil Microbiology*; Trees; Tropical Climate*; Biodiversity
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