Malaysia, a country of Muslim majority, is suffering from a severe organ shortage due to the lack of donors. Mosques are the main gateways into the Muslim community. Hence, it is imperative to explore their role in facilitating organ donation.
Colorectal cancer (CRC) is one of the most common cancer worldwide with approximately 2 to 5% of all colon cancers are associated with well-defined hereditary factors. Hereditary nonpolyposis colorectal cancer (Hereditary Nonpolyposis Colorectal Cancer), also known as Lynch syndrome (LS), is the most common form of hereditary CRC characterized by an early age of onset and follows the autosomal dominant inheritance pattern. HNPCC is caused by the alteration in four mismatch repair (MMR) genes. Immunohistochemistry (IHC) and microsatellite instability (MSI) testing, followed by conventional Sanger sequencing reliably identify the majority of mutations. However, methods to identify other underlying variants or genomic rearrangements of HNPCC have emerged. In addition to the clinical characterization and evaluation of HNPCC patients, the implementation of screening strategies for both affected and unaffected CRC patients together with the accelerated advancement in molecular testing methods will shed light on a more comprehensive detection of HNPCC. In this review, the approaches for the selection of high-risk HNPCC and molecular testing performed over the past few years are discussed.
The rapid progression of molecular-based technology now enables us to analyse huge number of samples. Nonetheless, DNA (Deoxyrebonucleic acid) extraction is always a limiting factor. In this study, we analysed human microbes to compare the performance of DNA extraction methods: simple boiling method and MasterPureTM Complete DNA and RNA Purification Kit. Dental plaque was initially collected from 12 subjects, 6 of which were from individuals with caries active lesions with International Caries Detection and Assessment System (ICDAS) score five and six, and 6 samples from non-caries subjects, were collected in deionised water. The bacterial samples were extracted by the two aforementioned methods and examined using gel electrophoresis, followed by polymerase chain reaction (PCR). Streptococcus mutans was detected using conventional polymerase chain reaction (PCR). Our results demonstrated that boiling method produced higher DNA concentration (100 – 350 ng/µl), however, the commercial kit yield superior in DNA quality with single and specific PCR products. Based on the findings, the commercial kit is the better choice and practicable method for DNA extraction considering the quality of the DNA yield.
Biocatalyst should have sufficient and efficient activity for the intended
biotechnological application. In the quest for novel biocatalyst, there is a need to have a
genetic diversity either by finding it within the astronomically large number of possible
candidates or to obtain it by bioengineering an existing gene supported by various
bioinformatic and molecular engineering tools. Nowadays, it is well-known that a huge
number of microorganisms is unculturable and poses great challenges to access biocatalysts
from these microbes. Metagenomics is one of the methods widely applied to reach out
maximum possible variants to “bioprospect” biocatalysts. On the other hand, other approaches
are available to bioengineer enzymes by modifying the DNA sequence precisely based on the
structure and the function information of the protein in the case of rational design, or by a
brave creation of anarchic mutations of the DNA sequence with directed evolution method. In
this regard, both approaches, whether to bioprospect or to bioengineer biocatalysts have
advantages and disadvantages which will be discussed in this paper.KEY WORDS: Sugar
industry wastewater; aluminium sulphate; primary treatment, ferric chloride; polyaluminium
chloride
Introduction:Acyclovir, a widely marketed antiviral drug is used for the treatment of Herpes Simplex infection. High doses of acyclovir are prescribed to patients to attain its maximum therapeutic effect due to its poor absorption and low oral bioavailability. The current therapeutics regiment of acyclovir are known to cause unwarranted adverse effects, thus prompted the need for a suitable drug carrier to improve the pharmacokinetic limitations. Develop-ment of solid lipid nanoparticles for oral delivery of acyclovir proposed in this study aimed to enhance acyclovir oral bioavailability. Methods: Comprehensive experiments and a series of optimization process were carried out to ensure reproducibility and assurance of product quality. The physicochemical characteristics of the solid lipid nanoparticles developed from plant-based solid lipid, Biogapress Vegetal 297 ATO with polysorbate 80 as an emul-sifying agent were also evaluated. Results: The spherical-shaped nanoparticles had an average size of 123 nm with good drug entrapment efficiency, up to 80%. The in vitro drug release study showed that solid lipid nanoparticles had prolonged acyclovir release in simulated intestinal fluid for 24 hours. The nanoparticles formulation was con-sidered stable during storage at refrigerated temperature for at least three months. In vivo oral bioavailability study showed that acyclovir-loaded solid lipid nanoparticles possessed superior oral bioavailability when compared with the commercial acyclovir suspension. Conclusion: In conclusion, this study exhibited the feasibility of solid lipid nanoparticles as an oral delivery vehicle for acyclovir and therefore represent a new promising therapeutic concept of nanoparticulate delivery system.
Mental health disorders (MHDs) among refugees has been recognized as a major public health issue. However, to date, there is limited evidence on the prevalence of MHDs among Rohingya refugees in Malaysia. This study aimed to examine the prevalence and associated factors of major depressive disorder (MDD), generalized anxiety disorder (GAD), and post-traumatic stress disorder (PTSD) among Rohingya refugees in Malaysia. A total of 220 refugees were randomly selected to participate in this cross-sectional study, conducted from June 2019 to November 2019. Perceived social support, religious orientation, food security, and sociodemographic characteristics were assessed as independent variables. The dependent variables assessed were MDD, GAD, and PTSD. The prevalence of GAD, PTSD, and MDD was reported at 92 (41.8%), 84 (38.2%), and 71 (32.3%). Several factors were significantly associated with MDD following multivariate analysis such as perceived low to moderate social support (AOR = 2.17; 95% CI 1.13, 4.19) and food insecurity (AOR = 2.77; 95% CI 1.19, 6.47). Exposure to violence (AOR = 38.46; 95% CI 16.27, 90.91) and food insecurity (AOR = 3.74; 95% CI 1.41, 9.91) were significantly associated with PTSD. Addressing these risk factors could be key in improving mental health outcomes among this vulnerable population.
The purpose of this study is to validate Sugar Craving Assessment Tool (MySCAT) among type II diabetes mellitus patients. A total of 168 respondents were recruited to participate in this cross sectional study. It was conducted in out-patient health clinics in Kuala Terengganu and Kuantan. Patients’ sugar craving and dietary behavior were measures using structured questionnaires which were MySCAT, three-day dietary recall and demographic data. The interview sessions were conducted by a dietician. MySCAT internal consistency test had a Cronbach’s alpha value of 0.75 and showed a significant correlation (r=0.56, p < 0.001) with actual sugar intake collected via three days diet recall. ROC analysis reported a cut-off point for MySCAT as 16.5; the sensitivity value of 0.83 and 1-specificity of 0.38. 62% of respondents were categorized as cravers and 38% as non-cravers. Male and female repondents had no significant differences in craving status. The mean intake of sugar was 46 g/day (SD= 2.26), respondents had a relatively high intake of sugar in comparison to their recommendation. This study found that MySCAT provides an easy efficient tool which is sensitive enough to identify those with sugar craving problem. It also provides an overview of patients’ dietary intake and points out their problem with dietary intake compliance. We suggest MySCAT as an important tool that can assist dietitians in their consultation session.
Acanthamoeba spp. merupakan ameba hidup bebas yang tersebar luas di persekitaran. Ameba ini menyebabkan penyakit
keratitis terutamanya kepada individu yang memakai kanta sentuh terkontaminasi atau mempunyai sejarah trauma
pada mata. Tujuh puluh empat sampel kikisan kornea pesakit keratitis daripada 4 buah hospital di sekitar Lembah
Kelang telah dikultur untuk menemukan Acanthamoeba spp. Keputusan kajian mendapati Acanthamoeba spp. berjaya
dipencilkan daripada 14.87% sampel kikisan kornea pesakit keratitis. Berdasarkan kajian ini, kesemua pesakit keratitis
Acanthamoeba adalah merupakan pemakai kanta sentuh yang majoritinya (90.9%) terdiri daripada kaum wanita. Kanta
sentuh lembut terlibat dalam 90.9% kes manakala jenis kanta separa keras cuma satu kes 9.1%. Kesemua 11 pencilan
Acanthamoeba yang dipencilkan adalah daripada kumpulan polyphagids yang biasanya patogenik kepada manusia dan
menyebabkan jangkitan ini. Kegagalan pengguna kanta sentuh mengamalkan tahap kebersihan kanta sentuh yang baik
merupakan faktor risiko yang penting dalam kejadian keratitis Acanthamoeba di Malaysia.
Basal stem rot disease of oil palm caused by Ganoderma boninense is one of the most devastating diseases in oil palm
plantation resulting in low yield, loss of palm stands and shorter replanting cycle. To-date, there is no effective treatment
for Ganoderma infected palms. Control measures, either chemical or cultural approaches, show varying degrees of
effectiveness. The application of biological control agents which is environmental-friendly could be an attractive solution
to overcome the problem. Earlier, we had isolated a mycoparasite, Scytalidium parasiticum, from the basidiomata of
Ganoderma boninense. In vitro assay and nursery experiment showed that this fungus could suppress Ganoderma infection
and reduce disease severity. However, metabolites which might contribute to the antagonistic or mycoparasitic effect
remain unknown. In the current study, optimization of fungal sample processing, extraction, and analytical procedures
were conducted to obtain metabolites from the maize substrate colonized by mycoparasitic ascomycetous Scytalidium
parasiticum. This technique capable of producing sexual spores in sac-like organs. Untargeted metabolomics profiling
was carried out by using Liquid Chromatography Time of Flight Mass Spectrometry (LC-ToF-MS). We found that
S. parasiticum in both liquid- and solid-state cultivation gave higher metabolite when extracted with 60% methanol with
1% formic acid in combination with homogenisation methods such as ultrasonication and grinding. The findings from
this study are useful for optimisation of metabolite extraction from other fungi-Ganoderma-plant interactions.
Tropical peat swamp forest (PSF) is one of the most endangered ecosystems in the world. However, the impacts of
anthropogenic activities in PSF and its conversion area towards fish biodiversity are less understood. This study
investigates the influences of water physico-chemical parameters on fish occurrences in peat swamp, paddy field and
oil palm plantation in the North Selangor peat swamp forest (NSPSF), Selangor, Malaysia. Fish and water samples were
collected from four sites located in the peat swamps, while two sites were located in the paddy field and oil palm plantation
areas. Multivariate analyses were used to determine the associations between water qualities and fish occurrences in
the three habitats. A total of 1,382 individual fish, belonging to 10 families, 15 genera and 20 species were collected.
The family Cyprinidae had the highest representatives, followed by Bagridae and Osphronemidae. The most abundant
species was Barbonymus schwanefeldii (Bleeker 1854), while the least abundant was Wallago leerii Bleeker, 1851. The
paddy field and oil palm plantation area recorded significantly higher fish diversity and richness relative to peat swamp
(p<0.05). The water physico-chemical parameters, such as pH, DO, NH3
-N, PO4, SO4
, and Cl2 showed no significant
difference between paddy field and oil palm plantation (p>0.05), but was significantly different from the peat swamp
(p<0.05). However, no water quality parameter was consistently observed to be associated with fish occurrences in all
of the three habitats, but water temperature, NH3
-N, Cl2, SO4
, and EC were at least associated with fish occurrences in
two habitats studied. This study confirmed that each habitat possess different water quality parameters associated with
fish occurrences. Understanding all these ecological aspects could help future management and conservation of NSPSF.
There are various secondary metabolites that have been identified in Polygonum minus Huds. or kesum plant, but
the production is often very low and depending on growth stage. Therefore, elicitation and in vitro techniques have
been suggested as an effective way for inducing secondary metabolites production in plant. This study was conducted
to determine the optimal conditions for P. minus root formation in vitro and to profile the metabolite content from
P. minus root culture with and without elicitor treatment. From the root induction study, it was found that the fresh
weight of induced root for nodal explant in MS liquid media supplemented with 0.5 mg/L NAA and shaken had the
highest production (0.38±0.08 g) compared to other treatments including the control. The results from metabolite
profile showed that the volatile compound of P. minus root produced without any elicitation contained 50.11% aliphatic
(27.59% aldehide, 9.17% alkane and 13.35% others) and 19.39% sesquiterpene (β-caryophyllene, α-bergamotene,
β-farnesene, α-caryophyllene dan β-curcumene) where the dodecanal compound (22.27%) and β-caryophyllene
(8.09%) have the highest percentage value for aliphatic and sesquiterpene group, respectively. Moreover, elicitation of
P. minus root culture using yeast extract at 100 mg/L concentration for 1 day demonstrated the ability to increase the
production of secondary metabolites in many volatile compounds of kesum in vitro root including the sesquiterpene
compounds compared to control treatment and other yeast extract elicitation treatments.
Flavonoid is an industrially-important compound due to its high pharmaceutical and cosmeceutical values. However,
conventional methods in extracting and synthesizing flavonoids are costly, laborious and not sustainable due to small
amount of natural flavonoids, large amounts of chemicals and space used. Biotechnological production of flavonoids
represents a viable and sustainable route especially through the use of metabolic engineering strategies in microbial
production hosts. In this review, we will highlight recent strategies for the improving the production of flavonoids
using synthetic biology approaches in particular the innovative strategies of genetically-encoded biosensors for in
vivo metabolite analysis and high-throughput screening methods using fluorescence-activated cell sorting (FACS).
Implementation of transcription factor based-biosensor for microbial flavonoid production and integration of systems
and synthetic biology approaches for natural product development will also be discussed.
Elaeis oleifera serves as a source of genetic foundation in oil palm improvement programme, as it possess several interesting agronomic traits such as slow growth, higher oil unsaturation and disease resistance. Malaysian Palm Oil Board (MPOB) has developed a collection of simple sequence repeats (SSRs) from Elaeis oleifera genome (E. oleifera-gSSRs). A total of 21 polymoprhic SSR markers were evaluated in the attempt to assess the population structure of E. oleifera populations. The appropriate common ancestry (K) value was determined to be seven from the likelihood scores. The profile from STRUCTURE analysis indicates considerable sharing of genetic components among E. oleifera population with an exception for Population 01 from Columbia and Population 02 from Costa Rica. The present study provides information on population structure of MPOB E. oleifera collection via model-based method for germplasm conservation and utilisation in breeding programmes.
Streptococcus pneumoniae (S. pneumoniae) is a gram-positive diplococci belonging to the genus Streptococcus and it is a well-studied pathogenic bacterium. Pneumococcal diseases such as otitis media, pneumonia, sepsis and meningitis caused by pathogenic strains of S. pneumoniae still brought significant mortality and morbidity worldwide. The pathogenicity of S. pneumoniae is exerted by various virulence factors and one of it is the enzyme hyaluronate lyase. Hyaluronate lyase plays a major role in
the invasive capability of S. pneumoniae. Its mechanism of action and crystallographic
structure have been determinedbut its regulatory mechanism is still poorly understood.
Drawing connections between the nutritional behaviour and invasive property of S.
pneumoniae, CodY regulator is hypothesized as a potential hyaluronate lyase regulator.
This work was aimed to construct CodY deficient mutant of S. pneumoniae to form
foundational work for the study of CodY regulatory effect on hyaluronate lyase.
Rapid urbanisation in Malaysian cities poses risks to the health of residents. This study aims to estimate the relative risk (RR) of major air pollutants on cardiovascular and respiratory hospitalisations in Kuala Lumpur. Daily hospitalisations due to cardiovascular and respiratory diseases from 2010 to 2014 were obtained from the Hospital Canselor Tuanku Muhriz (HCTM). The trace gases, PM10 and weather variables were obtained from the Department of Environment (DOE) Malaysia in consistent with the hospitalisation data. The RR was estimated using a Generalised Additive Model (GAM) based on Poisson regression. A "lag" concept was used where the analysis was segregated into risks of immediate exposure (lag 0) until exposure after 5 days (lag 5). The results showed that the gases could pose significant risks towards cardiovascular and respiratory hospitalisations. However, the RR value of PM10 was not significant in this study. Immediate effects on cardiovascular hospitalisations were observed for NO2 and O3 but no immediate effect was found on respiratory hospitalisations. Delayed effects on cardiovascular and respiratory hospitalisations were found with SO2 and NO2. The highest RR value was observed at lag 4 for respiratory admissions with SO2 (RR = 1.123, 95% CI = 1.045-1.207), followed by NO2 at lag 5 for cardiovascular admissions (RR = 1.025, 95% CI = 1.005-1.046). For the multi-pollutant model, NO2 at lag 5 showed the highest risks towards cardiovascular hospitalisations after controlling for O3 8 h mean lag 1 (RR = 1.026, 95% CI = 1.006-1.047), while SO2 at lag 4 showed highest risks towards respiratory hospitalisations after controlling for NO2 lag 3 (RR = 1.132, 95% CI = 1.053-1.216). This study indicated that exposure to trace gases in Kuala Lumpur could lead to both immediate and delayed effects on cardiovascular and respiratory hospitalisations.
Ariid catfishes, belong to family Ariidae is considered as one of the taxonomically problematic groups, which is still under review by fish taxonomist globally. Species level identification of some ariids often resulted in species misidentification because of their complex characters and very similar morphological characters within genera. A vigilant and detail observation is very important during the species level identification of ariid species. In these contexts, this study was carried out in order to determine the morphological variations of one of the ariid genera, Plicofollis, which have been giving misleading taxonomic information in the south-east Asian countries. A Truss network technique was used throughout the study period. The study was conducted based on 20 truss measurements using 22 to 23 specimens per species, namely P. argyropleuron, P. nella and P. tenuispinis found in Peninsular Malaysian waters. Morphological variations were determined using a multivariate technique of discriminant function analysis (DFA). The results obtained in this study showed that discriminant analysis using truss network measurements has produced very clear separations of all the species in Plicofollis group. Several important morphological characters have been identified, which represent body depth and caudal regions of the fish. The documentary evidences of these variables could be considered as the constructive functional features, which could enable us to assess more accurately to distinguish the species within this complex Ariidae family.
Baram Delta Operation had been producing oil and gas since 1960's and serious pipelines failure was reported in the year of 2005. The final investigation has concluded that one of the species of bacteria that has been identified to cause microbiologically influenced corrosion, specifically known as sulfate reducing bacteria (SRB) was found to be one of the potential contributing factors to the incidents. This work investigates the potential use of ultraviolet (UV) radiation to inhibit the SRB consortium that was cultivated from the crude oil in one of the main trunk lines at Baram Delta Operation, Sarawak, Malaysia. The impact of UV exposure to bio-corrosion conditions on carbon steel coupon in certain samples for 28 days was discussed in this study. The samples were exposed to UV radiation based on variations of parameters, namely: time of UV exposure; and power of UV lamp. The significant changes on the amount of turbidity reading and metal loss of the steel coupon were recorded before and after experiment. The results showed that SRB growth has reduced rapidly for almost 90% after the UV exposure for both parameters as compared to the abiotic samples. Metal loss values were also decreased in certain exposure condition. Additionally, field emission scanning electron microscopy (FESEM) coupled with energy dispersive spectroscopy (EDS) was performed to observe the biofilm layer formed on the metal surface after its exposure to SRB. The evidence suggested that the efficiency of UV treatment against SRB growth could be influenced by the particular factors studied
Thermally driven electrochemical cells (thermocells) are able to convert thermal gradient applied across redox electrolyte
into electricity. The performance of the thermocells heavily depends on the magnitude and integrity of the applied thermal
gradient. Herein, we study the iodide/triiodide (I–/I3
–) based 1-Ethyl-3-methyl-imidazolium Ethylsulfate ([EMIM][EtSO4])
solutions in a thermocell. In order to comprehend the role of fluidity of the electrolyte, we prepared set of solutions by
diluting [EMIM][EtSO4] with 0.002, 0.004, and 0.010 mol of Acetonitrile (ACN). We realized a significant improvement
in ionic conductivity (σ) and electrochemical Seebeck (Se) of diluted electrolytes as compared to base [EMIM][EtSO4]
owing to the solvent organization. However, the infra-red thermography indicated faster heat flow in ACN-diluted-[EMIM]
[EtSO4] as compared to the base [EMIM][EtSO4]. Therefore, the maximum power density of base [EMIM][EtSO4] (i.e.
118.5 µW.m-2) is 3 times higher than the ACN-diluted-[EMIM][EtSO4] (i.e. 36.1 µW.m-2) because of the lower thermal
conductivity. Hence this paper illustrates the compromise between the fast mass/flow transfer due to fluidity (of diluted
samples) and the low thermal conductivity (of the pure [EMIM][EtSO4]).
Forest degradation and deforestation are some of the major global concerns as they can reduce the forest carbon stock
and sequestration capacity. However, the carbon stock and sequestration potential in a mixed dipterocarp tropical forest
remains unclear due to a lack of information. This study was carried out on the carbon stock and estimated its economic
value to justify its conservation. Six plots were established in the Endau Rompin National Park, Johor and subplots
measuring 50 × 20 m were established in each plot. All trees greater than 15 cm DBH (diameter at breast height) were
identified and the parameters measured included tree height and diameter. The aboveground carbon (AGC) content was
about 222 Mg(C) ha-1, belowground carbon (BGC) was 53 Mg (C) ha-1 and it was 6 Mg (C) ha-1 for other components.
In total, the carbon stock amounted to 281 Mg (C) ha-1. On the other hand, the total CO2 sequestrated in the mixed
dipterocarp forest amounted to 1,040 t CO2
ha-1. The carbon value was estimated at RM32,240 t CO2
ha-1 or $7,280 t CO2
ha-1. Therefore, the study found that the dipterocarp forest should be preserved to mitigate greenhouse gas emissions.
A balanced dietary intake plays an important role in the prognosis of breast cancer and is one of the modifiable factors in preventing cancer recurrence. This study aims to determine the dietary intake among breast cancer survivors in East Coast of Peninsular Malaysia. A total of 125 breast cancer survivors, aged 37 to 72 years, with mean duration of survivorship of 6.1 ± 3.9 years were recruited from two main referral hospitals in Terengganu and Kelantan. Majority of the respondents were Malay (94.4%) with a mean BMI of 27.7 ± 5.07 kg/m², and were diagnosed with stage II cancer (66.0%). Dietary intake was estimated using a semi-quantitative food frequency questionnaire (FFQ). The results show that the mean daily intake of energy was 1764 ± 378 kcal/day, protein was 72.38 ± 33.6 g/day (16.5% of energy), carbohydrate was 243.0 ± 62.2 g/day (55% of energy) and fat was 55.8 ± 15.6 g/day (28% of energy). Overall, breast cancer survivors in this study had an adequate daily intake of vitamins and minerals according to Malaysian Recommended Nutrient Intakes (RNI) except for dietary fibre (10.6 ± 4.2 g/day), monounsaturated fatty acids (20.7 ± 5.7 g/day), polyunsaturated fatty acids (8.0 ± 2.2 g/day), calcium (561.0 ± 257.1 mg/day), iron (18.3 ± 7.2 mg/day) and potassium (1813.4 ± 531.1 mg/day) which was lower than the recommendation. Meanwhile, intake of sodium (2592 ± 1697 mg/day), protein (80.4 ± 33.6 g/day), saturated fatty acids (26.9 ± 14.2 g/day), vitamin B2 (1.9 ± 1.1 mg/day) and vitamin C (151.1 ± 149.3 mg/day) exceeded the recommendation by 135.0%, 139.0%, 166.9%, 154.6% and 152.0%, respectively. There was no significant difference in dietary intake between cancer survivors who were diagnosed in the past five years and those who were diagnosed more than five years ago (p>0.05) except for fat (p<0.001), saturated fatty acid (p=0.006), monounsaturated fatty acid (p=0.005) and polyunsaturated fatty acid (p=0.003). As a conclusion, breast cancer survivors in East Coast of Peninsular Malaysia had an adequate intake of most nutrients except for dietary fibre, monounsaturated fatty acids, polyunsaturated fatty acids, calcium, iron and potassium which was below the recommendation and sodium, protein, saturated fatty acids, vitamin B2, vitamin C which was above the recommendation. The intakes between long-term and short-term survivors were also comparable showing sustained dietary intake throughout survivorship.