Browse publications by year: 2020

  1. Abu N, Othman N, Ab Razak NS, Bakarurraini NAAR, Nasir SN, Soh JEC, et al.
    Front Cell Dev Biol, 2020;8:564648.
    PMID: 33324632 DOI: 10.3389/fcell.2020.564648
    Colorectal cancer (CRC) is one of the most widely diagnosed cancers worldwide. It has been shown that the body-mass index (BMI) of the patients could influence the tumor microenvironment, treatment response, and overall survival rates. Nevertheless, the mechanism on how BMI affects the tumorigenesis process, particularly the tumor microenvironment is still elusive. Herein, we postulate that extracellular vesicles (EVs) from CRC patients and non-CRC volunteers with different BMI could affect immune cells differently, in CD8 T cells particularly. We isolated the EVs from the archived serum of CRC patients with high and low BMI, as well as healthy controls with similar BMI status. The EVs were further characterized via electron microscopy, western blot and dynamic light scattering. Then, functional analysis was performed on CD8 T cells including apoptosis, cell proliferation, gene expression profiling and cytokine release upon co-incubation with the different EVs. Our results suggest that CRC-derived EVs were able to regulate the CD8 T cells. In some assays, low BMI EVs were functionally different than high BMI EVs. This study highlights the possible difference in the regulatory mechanism of cancer patients-derived EVs, especially on CD8 T cells.
    MeSH terms: Extracellular Vesicles; Dynamic Light Scattering; Humans; Microscopy, Electron; Volunteers; Blotting, Western; Colorectal Neoplasms; Body Mass Index; Survival Rate; Cytokines; Apoptosis; CD8-Positive T-Lymphocytes; Gene Expression Profiling; Cell Proliferation; Tumor Microenvironment; Carcinogenesis
  2. Zaini MS, Liew JYC, Alang Ahmad SA, Mohmad AR, Ahmad Kamarudin M
    ACS Omega, 2020 Dec 08;5(48):30956-30962.
    PMID: 33324803 DOI: 10.1021/acsomega.0c03768
    The existence of surface organic capping ligands on quantum dots (QDs) has limited the potential in QDs emission properties and energy band gap structure alteration as well as the carrier localization. This drawback can be addressed via depositing a thin layer of a semiconductor material on the surface of QDs. Herein, we report on the comparative study for photoluminescent (PL) properties of PbS and PbS/MnS QDs. The carrier localization effect due to the alteration of energy band gap structure and carrier recombination mechanism in the QDs were investigated via PL measurements in a temperature range of 10-300 K with the variation of the excitation power from 10 to 200 mW. For PbS QDs, the gradient of integrated PL intensity (IPL) as a function of excitation power density graph was less than unity. When the MnS shell layer was deposited onto the PbS core, the PL emission exhibited a blue shift, showing dominant carrier recombination. It was also found that the full width half-maximum showed a gradual broadening with the increasing temperature, affirming the electron-phonon interaction.
    MeSH terms: Electrons; Ligands; Recombination, Genetic; Semiconductors; Temperature; Cadmium Compounds; Quantum Dots; Phonons
  3. Yazid SNE, Jinap S, Ismail SI, Magan N, Samsudin NIP
    Compr Rev Food Sci Food Saf, 2020 03;19(2):643-669.
    PMID: 33325175 DOI: 10.1111/1541-4337.12541
    In this review, we present the current information on development and applications of biological control against phytopathogenic organisms as well as mycotoxigenic fungi in Malaysia as part of the integrated pest management (IPM) programs in a collective effort to achieve food security. Although the biological control of phytopathogenic organisms of economically important crops is well established and widely practiced in Malaysia with considerable success, the same cannot be said for mycotoxigenic fungi. This is surprising because the year round hot and humid Malaysian tropical climate is very conducive for the colonization of mycotoxigenic fungi and the potential contamination with mycotoxins. This suggests that less focus has been made on the control of mycotoxigenic species in the genera Aspergillus, Fusarium, and Penicillium in Malaysia, despite the food security and health implications of exposure to the mycotoxins produced by these species. At present, there is limited research in Malaysia related to biological control of the key mycotoxins, especially aflatoxins, Fusarium-related mycotoxins, and ochratoxin A, in key food and feed chains. The expected threats of climate change, its impacts on both plant physiology and the proliferation of mycotoxigenic fungi, and the contamination of food and feed commodities with mycotoxins, including the discovery of masked mycotoxins, will pose significant new global challenges that will impact on mycotoxin management strategies in food and feed crops worldwide. Future research, especially in Malaysia, should urgently focus on these challenges to develop IPM strategies that include biological control for minimizing mycotoxins in economically important food and feed chains for the benefit of ensuring food safety and food security under climate change scenarios.
    MeSH terms: Aspergillus/growth & development; Food Contamination/prevention & control*; Fungi/growth & development*; Fusarium/growth & development; Malaysia; Mycotoxins*; Penicillium/growth & development; Plant Diseases/microbiology*; Plant Diseases/prevention & control; Crops, Agricultural/microbiology; Food Safety; Biological Control Agents
  4. Sarfaraz S, Ahmed N, Abbasi MS, Sajjad B, Vohra F, Al-Hamdan RS, et al.
    Work, 2020;67(4):791-798.
    PMID: 33325429 DOI: 10.3233/WOR-203332
    BACKGROUND: The aim of this study was to evaluate the self-perceived competency (FSPC) of medical faculty in E-Teaching and support received during the COVID-19 pandemic.

    METHODS: An online well-structured and validated faculty self-perceived competency questionnaire was used to collect responses from medical faculty. The questionnaire consisted of four purposely build sections on competence in student engagement, instructional strategy, technical communication and time management. The responses were recorded using a Likert ordinal scale (1-9). The Questionnaire was uploaded at www.surveys.google.com and the link was distributed through social media outlets and e-mails. Descriptive statistics and Independent paired t-test were used for analysis and comparison of quantitative and qualitative variables. A p-value of ≤0.05 was considered statistically significant.

    RESULTS: A total of 738 responses were assessed. Nearly 54% (397) participants had less than 5 years of teaching experience, 24.7% (182) had 6-10 years and 11.7% (86) had 11-15 years teaching expertise. 75.6% (558) respondents have delivered online lectures during the pandemic. Asynchronous methods were used by 61% (450) and synchronous by 39% (288) of participants. Moreover, 22.4% (165) participants revealed that their online lectures were evaluated by a structured feedback from experts, while 38.3% participants chose that their lectures were not evaluated. A significant difference (p 

    MeSH terms: Formative Feedback; Communication; Female; Humans; Male; Professional Competence*; Surveys and Questionnaires; Self Concept*; Time Management; Education, Distance*; Pandemics
  5. Ismail SI, Roslen A
    Plant Dis, 2020 Dec 16.
    PMID: 33325746 DOI: 10.1094/PDIS-08-20-1700-PDN
    Euphorbia tithymaloides L. (zig-zag plant) is a succulent, perennial shrub belonging to the Euphorbiaceae family and is widely cultivated in Malaysia for ornamental purposes and commercial values. In June 2019, typical symptoms of powdery mildew were observed on over 50% of the leaves of E. tithymaloides in a garden at Universiti Putra Malaysia, Serdang city of Selangor province, Malaysia. Initial symptoms included circular to irregular white powdery fungal colonies on both leaf surfaces and later covered the entire leaf surface. Severely infected leaves became necrotic, distorted and senesced. A voucher specimen Ma (PM001-Ma) was deposited in the Mycology laboratory, Faculty of Agriculture, UPM. Microscopic observation showed hyphae hyaline, branched, thin-walled, smooth, 3 to 6 µm wide with nipple-shaped appressoria. Conidiophores were straight, measured 30 to 90 μm long × 8 to 12 μm wide and composed of a cylindrical foot cell, 50 to 75 μm long. Conidia formed in chains were hyaline, ellipsoid to oval with fibrosin bodies, measured 25 to 36 × 16 to 20.1 μm in size and chasmothecia were not observed on the infected leaves. Genomic DNA was directly isolated from mycelia and conidia of isolate Ma using DNeasy Plant Mini Kit (Qiagen, USA). The universal primer pair ITS4/ITS5 of rDNA (White et al. 1990) was used for amplification and the resulting 569-bp sequence was deposited in GenBank (Accession no. MT704550). A BLAST nucleotide search revealed 100% similarity with that of Podosphaera xanthii on Momordica charantia wild from Taiwan (Accession no. KM505135) (Kirschner and Liu 2015). Both the morphological characteristics of the anamorph and ITS sequence data support the identification of this powdery mildew on E. tithymaloides as Podosphaera xanthii (Castagne) U. Braun & Shishkoff (Braun and Cook 2012). A pathogenicity test was conducted by gently pressing the infected leaves onto young leaves of five healthy potted plants. Five noninoculated plants were used as controls. The inoculated plants were maintained in a greenhouse at 25 ± 2°C and the test was repeated. Seven days after inoculation, white powdery symptoms were observed similar to those on the naturally infected leaves, while control plants remained asymptomatic. The fungus on the inoculated leaves was morphologically and molecularly identical to the fungus on the original specimens. Sequence alignments were made using MAFFT v.7.0 (Katoh et al. 2019) and a maximum likelihood phylogram was generated by MEGA v.7.0 (Kumar et al. 2016). Isolate Ma grouped in a strongly supported clade (100% bootstrap value) with the related species of P. xanthii available in GenBank based on the ITS region. Powdery mildew caused by P. xanthii has been reported as a damaging disease that can infect a broad range of plants worldwide (Farr and Rossman 2020). It also has been recently reported on Sonchus asper in China (Shi et al. 2020). According to our knowledge, this is the first report of powdery mildew caused by P. xanthii on E. tithymaloides worldwide. The occurrence of powdery mildew on E. tithymaloides could pose a serious threat to the health of this plant, resulting in death and premature senescence of young leaves.
  6. Sacks G, Riesenberg D, Mialon M, Dean S, Cameron AJ
    PLoS One, 2020;15(12):e0243144.
    PMID: 33326431 DOI: 10.1371/journal.pone.0243144
    INTRODUCTION: There is emerging evidence that food industry involvement in nutrition research may bias research findings and/or research agendas. However, the extent of food industry involvement in nutrition research has not been systematically explored. This study aimed to identify the extent of food industry involvement in peer-reviewed articles from a sample of leading nutrition-related journals, and to examine the extent to which findings from research involving the food industry support industry interests.

    METHODS: All original research articles published in 2018 in the top 10 most-cited nutrition- and dietetics-related journals were analysed. We evaluated the proportion of articles that disclosed involvement from the food industry, including through author affiliations, funding sources, declarations of interest or other acknowledgments. Principal research findings from articles with food industry involvement, and a random sample of articles without food industry involvement, were categorised according to the extent to which they supported relevant food industry interests.

    RESULTS: 196/1,461 (13.4%) articles reported food industry involvement. The extent of food industry involvement varied by journal, with The Journal of Nutrition (28.3%) having the highest and Paediatric Obesity (3.8%) having the lowest proportion of industry involvement. Processed food manufacturers were involved in the most articles (77/196, 39.3%). Of articles with food industry involvement, 55.6% reported findings favourable to relevant food industry interests, compared to 9.7% of articles without food industry involvement.

    CONCLUSION: Food industry involvement in peer-reviewed research in leading nutrition-related journals is commonplace. In line with previous literature, this study has shown that a greater proportion of peer-reviewed studies involving the food industry have results that favour relevant food industry interests than peer-reviewed studies without food industry involvement. Given the potential competing interests of the food industry, it is important to explore mechanisms that can safeguard the integrity and public relevance of nutrition research.

    MeSH terms: Humans; Peer Review; Conflict of Interest*
  7. Nazzlin Dizana Din
    MyJurnal
    Inherited thalassaemia disease is commonly found in many countries of the world. Care of the disease requires comprehensive management strategies comprising of clinical management of both transfusion dependant thalassaemia (TDT) and non-transfusion dependant thalassaemia (NTDT). It also includes preventive measures such as screening programmes and genetic counseling in order to contain the genetic transmission. At the moment, the only cure is through haematopoeitic stem cell transplant (HSCT). This report illustrates thalassaemia disease prevalence in the Terengganu state and the evolution of care since National Thalassaemia Programme was launched in 2009.
    MeSH terms: Genetic Counseling; Thalassemia; Prevalence; Hematopoietic Stem Cell Transplantation; Stem Cell Transplantation
  8. Sekine M, Yoshida A, Akizuki S, Kishi M, Toda T
    Water Sci Technol, 2020 Sep;82(6):1070-1080.
    PMID: 33055397 DOI: 10.2166/wst.2020.153
    A novel coupling process using an aerobic bacterial reactor with nitrification and sulfur-oxidization functions followed by a microalgal reactor was proposed for simultaneous biogas desulfurization and anaerobic digestion effluent (ADE) treatment. ADE nitrified by bacteria has a potential to be directly used as a culture medium for microalgae because ammonium nitrogen, including inhibitory free ammonia (NH3), has been converted to harmless NO3-. To demonstrate this hypothesis, Chlorella sorokiniana NIES-2173, which has ordinary NH3 tolerance; that is, 1.6 mM of EC50 compared with other species, was cultivated using untreated/treated ADE. Compared with the use of a synthetic medium, when using ADE with 1-10-fold dilutions, the specific growth rate and growth yield maximally decreased by 44% and 88%, respectively. In contrast, the algal growth using undiluted ADE treated by nitrification-desulfurization was almost the same as with using synthetic medium. It was also revealed that 50% of PO43- and most metal concentrations of ADE decreased following nitrification-desulfurization treatment. Moreover, upon NaOH addition for pH adjustment, the salinity increased to 0.66%. The decrease in metals mitigates the bioconcentration of toxic heavy metals from wastewater in microalgal biomass. Meanwhile, salt stress in microalgae and limiting nutrient supplementation, particularly for continuous cultivation, should be of concern.
    MeSH terms: Anaerobiosis; Chlorella*; Microalgae*; Nitrification; Waste Water
  9. Lee GLY, Zakaria NN, Convey P, Futamata H, Zulkharnain A, Suzuki K, et al.
    Int J Mol Sci, 2020 Dec 09;21(24).
    PMID: 33316871 DOI: 10.3390/ijms21249363
    Study of the potential of Antarctic microorganisms for use in bioremediation is of increasing interest due to their adaptations to harsh environmental conditions and their metabolic potential in removing a wide variety of organic pollutants at low temperature. In this study, the psychrotolerant bacterium Rhodococcus sp. strain AQ5-07, originally isolated from soil from King George Island (South Shetland Islands, maritime Antarctic), was found to be capable of utilizing phenol as sole carbon and energy source. The bacterium achieved 92.91% degradation of 0.5 g/L phenol under conditions predicted by response surface methodology (RSM) within 84 h at 14.8 °C, pH 7.05, and 0.41 g/L ammonium sulphate. The assembled draft genome sequence (6.75 Mbp) of strain AQ5-07 was obtained through whole genome sequencing (WGS) using the Illumina Hiseq platform. The genome analysis identified a complete gene cluster containing catA, catB, catC, catR, pheR, pheA2, and pheA1. The genome harbours the complete enzyme systems required for phenol and catechol degradation while suggesting phenol degradation occurs via the β-ketoadipate pathway. Enzymatic assay using cell-free crude extract revealed catechol 1,2-dioxygenase activity while no catechol 2,3-dioxygenase activity was detected, supporting this suggestion. The genomic sequence data provide information on gene candidates responsible for phenol and catechol degradation by indigenous Antarctic bacteria and contribute to knowledge of microbial aromatic metabolism and genetic biodiversity in Antarctica.
    MeSH terms: Acclimatization; Bacterial Proteins/genetics; Bacterial Proteins/metabolism; Biodegradation, Environmental; Catechols/metabolism*; Cold Temperature; Rhodococcus/genetics*; Rhodococcus/metabolism; Genome, Bacterial*; Catechol 1,2-Dioxygenase/genetics; Catechol 1,2-Dioxygenase/metabolism
  10. Selvaraju G, Leow TC, Salleh AB, Normi YM
    Molecules, 2020 Dec 09;25(24).
    PMID: 33316879 DOI: 10.3390/molecules25245797
    Previously, a hypothetical protein (HP) termed Bleg1_2437 (currently named Bleg1_2478) from Bacillus lehensis G1 was discovered to be an evolutionary divergent B3 subclass metallo-β-lactamase (MBL). Due to the scarcity of clinical inhibitors for B3 MBLs and the divergent nature of Bleg1_2478, this study aimed to design and characterise peptides as inhibitors against Bleg1_2478. Through in silico docking, RSWPWH and SSWWDR peptides with comparable binding energy to ampicillin were obtained. In vitro assay results showed RSWPWH and SSWWDR inhibited the activity of Bleg1_2478 by 50% at concentrations as low as 0.90 µM and 0.50 µM, respectively. At 10 µM of RSWPWH and 20 µM of SSWWDR, the activity of Bleg1_2478 was almost completely inhibited. Isothermal titration calorimetry (ITC) analyses showed slightly improved binding properties of the peptides compared to ampicillin. Docked peptide-protein complexes revealed that RSWPWH bound near the vicinity of the Bleg1_2478 active site while SSWWDR bound at the center of the active site itself. We postulate that the peptides caused the inhibition of Bleg1_2478 by reducing or blocking the accessibility of its active site from ampicillin, thus hampering its catalytic function.
    MeSH terms: Amino Acid Sequence; Ampicillin/pharmacology; Ampicillin/chemistry; Bacillus/enzymology; Bacillus/genetics; Bacterial Proteins/antagonists & inhibitors; Bacterial Proteins/genetics; Bacterial Proteins/chemistry; beta-Lactamases/drug effects*; beta-Lactamases/genetics; beta-Lactamases/chemistry; Oligopeptides/chemical synthesis*; Oligopeptides/pharmacology; Oligopeptides/chemistry*; Recombinant Proteins/drug effects; Recombinant Proteins/genetics; Recombinant Proteins/chemistry; Thermodynamics; Drug Design; Evolution, Molecular; Chemical Phenomena; Hydrophobic and Hydrophilic Interactions; Molecular Docking Simulation; beta-Lactamase Inhibitors/chemical synthesis*; beta-Lactamase Inhibitors/pharmacology; beta-Lactamase Inhibitors/chemistry*
  11. Sadrolhosseini AR, Krishnan G, Shafie S, Abdul Rashid S, Wadi Harun S
    Molecules, 2020 Dec 09;25(24).
    PMID: 33316885 DOI: 10.3390/molecules25245798
    This study used the carbon dots solution for the laser ablation technique to fabricate silver nanoparticles. The ablation time range was from 5 min to 20 min. Analytical methods, including Fourier transform infrared spectroscopy (FTIR), UV-visible spectroscopy, transmission electron microscopy, and Raman spectroscopy were used to categorize the prepared samples. The UV-visible and z-scan techniques provided optical parameters such as linear and nonlinear refractive indices in the range of 1.56759 to 1.81288 and 7.3769 × 10-10 cm2 W-1 to 9.5269 × 10-10 cm2 W-1 and the nonlinear susceptibility was measured in the range of 5.46 × 10-8 to 6.97 × 10-8 esu. The thermal effusivity of prepared samples, which were measured using the photoacoustic technique, were in the range of 0.0941 W s1/2 cm-2 K-1 to 0.8491 W s1/2 cm-2 K-1. The interaction of the prepared sample with fluoride was investigated using a Raman spectrometer. Consequently, the intensity of the Raman signal decreased with the increasing concentration of fluoride, and the detection limit is about 0.1 ppm.
    MeSH terms: Carbon/chemistry*; Fluorides/chemistry; Lasers; Silver/chemistry*; Solutions; Spectrum Analysis, Raman; Spectroscopy, Fourier Transform Infrared; Nanotechnology; Microscopy, Electron, Transmission; Nanocomposites/ultrastructure; Nanocomposites/chemistry*; Metal Nanoparticles/ultrastructure; Metal Nanoparticles/chemistry*; Optical Phenomena; Photoacoustic Techniques
  12. Hussin FS, Chay SY, Zarei M, Meor Hussin AS, Ibadullah WZW, Zaharuddin ND, et al.
    Foods, 2020 Dec 09;9(12).
    PMID: 33316941 DOI: 10.3390/foods9121826
    The current study evaluated the γ-aminobutyric acid (GABA) producing ability from three novel strains of lactic acid bacteria (L. plantarum Taj-Apis362, assigned as UPMC90, UPMC91, and UPMC1065) co-cultured with starter culture in a yogurt. A combination of UPMC90 + UPMC91 with starter culture symbiotically revealed the most prominent GABA-producing effect. Response surface methodology revealed the optimized fermentation conditions at 39.0 °C, 7.25 h, and 11.5 mM glutamate substrate concentration to produce GABA-rich yogurt (29.96 mg/100 g) with desirable pH (3.93) and water-holding capacity (63.06%). At 2% glucose to replace pyridoxal-5-phosphate (PLP), a cofactor typically needed during GABA production, GABA content was further enhanced to 59.00 mg/100 g. In vivo study using this sample revealed a blood pressure-lowering efficacy at 0.1 mg/kg GABA dosage (equivalent to 30 mg/kg GABA-rich yogurt) in spontaneously hypertensive rats. An improved method to produce GABA-rich yogurt has been established, involving shorter fermentation time and lower glutamate concentration than previous work, along with glucose induction that omits the use of costly PLP, fostering the potential of developing a GABA-rich functional dairy product through natural fermentation with desirable product quality and antihypertensive property.
    MeSH terms: Animals; Antihypertensive Agents; Blood Pressure; Fermentation; gamma-Aminobutyric Acid; Glucose; Hydrogen-Ion Concentration; Phosphates; Pyridoxal Phosphate; Rats, Inbred SHR; Water; Yogurt; Glutamic Acid; Rats; Lactobacillales
  13. Eskandari A, Leow TC, Rahman MBA, Oslan SN
    Biomolecules, 2020 12 09;10(12).
    PMID: 33317024 DOI: 10.3390/biom10121649
    Antifreeze proteins (AFPs) are specific proteins, glycopeptides, and peptides made by different organisms to allow cells to survive in sub-zero conditions. AFPs function by reducing the water's freezing point and avoiding ice crystals' growth in the frozen stage. Their capability in modifying ice growth leads to the stabilization of ice crystals within a given temperature range and the inhibition of ice recrystallization that decreases the drip loss during thawing. This review presents the potential applications of AFPs from different sources and types. AFPs can be found in diverse sources such as fish, yeast, plants, bacteria, and insects. Various sources reveal different α-helices and β-sheets structures. Recently, analysis of AFPs has been conducted through bioinformatics tools to analyze their functions within proper time. AFPs can be used widely in various aspects of application and have significant industrial functions, encompassing the enhancement of foods' freezing and liquefying properties, protection of frost plants, enhancement of ice cream's texture, cryosurgery, and cryopreservation of cells and tissues. In conclusion, these applications and physical properties of AFPs can be further explored to meet other industrial players. Designing the peptide-based AFP can also be done to subsequently improve its function.
    MeSH terms: alpha-Fetoproteins; Animals; Bacteria; Cryosurgery; Crystallization; Freezing; Glycopeptides; Ice Cream; Saccharomyces cerevisiae; Temperature; Water; Yeast, Dried; Cryopreservation; Computational Biology; Antifreeze Proteins; Protein Conformation, alpha-Helical; Protein Conformation, beta-Strand
  14. Sha'fie MSA, Rathakrishnan S, Hazanol IN, Dali MHI, Khayat ME, Ahmad S, et al.
    Antioxidants (Basel), 2020 Dec 09;9(12).
    PMID: 33317056 DOI: 10.3390/antiox9121253
    Microglial cells are the primary immune cell resident in the brain. Growing evidence indicates that microglial cells play a prominent role in alcohol-induced brain pathologies. However, alcohol-induced effects on microglial cells and the underlying mechanisms are not fully understood, and evidence exists to support generation of oxidative stress due to NADPH oxidases (NOX_-mediated production of reactive oxygen species (ROS). Here, we investigated the role of the oxidative stress-sensitive Ca2+-permeable transient receptor potential melastatin-related 2 (TRPM2) channel in ethanol (EtOH)-induced microglial cell death using BV2 microglial cells. Like H2O2, exposure to EtOH induced concentration-dependent cell death, assessed using a propidium iodide assay. H2O2/EtOH-induced cell death was inhibited by treatment with TRPM2 channel inhibitors and also treatment with poly(ADP-ribose) polymerase (PARP) inhibitors, demonstrating the critical role of PARP and the TRPM2 channel in EtOH-induced cell death. Exposure to EtOH, as expected, led to an increase in ROS production, shown using imaging of 2',7'-dichlorofluorescein fluorescence. Consistently, EtOH-induced microglial cell death was suppressed by inhibition of NADPH oxidase (NOX) as well as inhibition of protein kinase C. Taken together, our results suggest that exposure to high doses of ethanol can induce microglial cell death via the NOX/ROS/PARP/TRPM2 signaling pathway, providing novel and potentially important insights into alcohol-induced brain pathologies.
    MeSH terms: Poly(ADP-ribose) Polymerase Inhibitors; Ethanol; Brain; Calcium; Family Characteristics; Fluorescence; Hydrogen Peroxide; Poly(ADP-ribose) Polymerases; Propidium; Protein Kinase C; Signal Transduction; Cell Death; Reactive Oxygen Species; Microglia; Oxidative Stress; TRPM Cation Channels
  15. Biswas MK, Bagchi M, Biswas D, Harikrishna JA, Liu Y, Li C, et al.
    Genes (Basel), 2020 12 09;11(12).
    PMID: 33317074 DOI: 10.3390/genes11121479
    Trait tagging through molecular markers is an important molecular breeding tool for crop improvement. SSR markers encoded by functionally relevant parts of a genome are well suited for this task because they may be directly related to traits. However, a limited number of these markers are known for Musa spp. Here, we report 35136 novel functionally relevant SSR markers (FRSMs). Among these, 17,561, 15,373 and 16,286 FRSMs were mapped in-silico to the genomes of Musa acuminata, M. balbisiana and M. schizocarpa, respectively. A set of 273 markers was validated using eight accessions of Musa spp., from which 259 markers (95%) produced a PCR product of the expected size and 203 (74%) were polymorphic. In-silico comparative mapping of FRSMs onto Musa and related species indicated sequence-based orthology and synteny relationships among the chromosomes of Musa and other plant species. Fifteen FRSMs were used to estimate the phylogenetic relationships among 50 banana accessions, and the results revealed that all banana accessions group into two major clusters according to their genomic background. Here, we report the first large-scale development and characterization of functionally relevant Musa SSR markers. We demonstrate their utility for germplasm characterization, genetic diversity studies, and comparative mapping in Musa spp. and other monocot species. The sequences for these novel markers are freely available via a searchable web interface called Musa Marker Database.
    MeSH terms: Genetics, Population/methods; Phylogeny; Polymorphism, Genetic/genetics; Species Specificity; Genetic Variation/genetics; Reproducibility of Results; DNA, Plant/genetics; Genome, Plant/genetics; Microsatellite Repeats/genetics*; Genomics/methods; Musa/classification; Musa/genetics*; Genome-Wide Association Study/methods
  16. O' Donnell M, Hankey GJ, Rangarajan S, Chin SL, Rao-Melacini P, Ferguson J, et al.
    Heart, 2020 Dec 14.
    PMID: 33318082 DOI: 10.1136/heartjnl-2019-316515
    OBJECTIVE: Hypertension is the most important modifiable risk factor for stroke globally. We hypothesised that country-income level variations in knowledge, detection and treatment of hypertension may contribute to variations in the association of blood pressure with stroke.

    METHODS: We undertook a standardised case-control study in 32 countries (INTERSTROKE). Cases were patients with acute first stroke (n=13 462) who were matched by age, sex and site to controls (n=13 483). We evaluated the associations of knowledge, awareness and treatment of hypertension with risk of stroke and its subtypes and whether this varied by gross national income (GNI) of country. We estimated OR and population attributable risk (PAR) associated with treated and untreated hypertension.

    RESULTS: Hypertension was associated with a graded increase in OR by reducing GNI, ranging from OR 1.92 (99% CI 1.48 to 2.49) to OR 3.27 (2.72 to 3.93) for highest to lowest country-level GNI (p-heterogeneity<0.0001). Untreated hypertension was associated with a higher OR for stroke (OR 5.25; 4.53 to 6.10) than treated hypertension (OR 2.60; 2.32 to 2.91) and younger age of first stroke (61.4 vs 65.4 years; p<0.01). Untreated hypertension was associated with a greater risk of intracerebral haemorrhage (OR 6.95; 5.61 to 8.60) than ischaemic stroke (OR 4.76; 3.99 to 5.68). The PAR associated with untreated hypertension was higher in lower-income regions, PAR 36.3%, 26.3%, 19.8% to 10.4% by increasing GNI of countries. Lifetime non-measurement of blood pressure was associated with stroke (OR 1.80; 1.32 to 2.46).

    CONCLUSIONS: Deficits in knowledge, detection and treatment of hypertension contribute to higher risk of stroke, younger age of onset and larger proportion of intracerebral haemorrhage in lower-income countries.

  17. Tong CV, Tai YT
    BMJ Case Rep, 2020 Dec 13;13(12).
    PMID: 33318251 DOI: 10.1136/bcr-2020-238012
    Leydig cell tumours (LCTs) of the ovary are rare ovarian tumours that usually present with hyperandrogenism. Conventional radiological imagings are helpful in localising these tumours. However, some tumours may be too small to be localised before curative surgical removal. It is important to identify these androgen-secreting neoplasms which originate mostly from adrenals or ovaries because they are potentially malignant and require specific treatment. When conventional imagings are unrevealing, selective ovarian and adrenal venous sampling (SOAVS) is the next option. We report a case of LCT that was localised by SOAVS after results from other imaging modalities remained inconclusive.
    MeSH terms: Adult; Androgens/metabolism; Female; Hirsutism/etiology; Humans; Leydig Cell Tumor/complications*; Leydig Cell Tumor/metabolism; Leydig Cell Tumor/pathology*; Leydig Cell Tumor/surgery; Ovarian Neoplasms/complications*; Ovarian Neoplasms/metabolism; Ovarian Neoplasms/pathology*; Ovarian Neoplasms/surgery; Laparoscopy; Hyperandrogenism/etiology*
  18. Khoo S, Do NDT, Kongkam P
    Endosc Ultrasound, 2020 12 16;9(6):369-379.
    PMID: 33318375 DOI: 10.4103/eus.eus_59_20
    Malignant biliary obstruction (MBO) encompasses a variety of malignancies arising from the pancreaticobiliary system. This can be divided into malignant hilar biliary obstruction (MHBO) or malignant distal biliary obstruction (MDBO) biliary obstruction to which clinical outcomes and technical considerations of various biliary drainage methods may differ. EUS biliary drainage (EUS-BD) has been increasingly influential in the management of MBO together with other familiar biliary drainage methods such as ERCP and percutaneous transhepatic biliary drainage (PTBD). Conventionally, ERCP has always been the primary choice of endoscopic biliary drainage in both MHBO and MDBO and that PTBD or EUS-BD is used as a salvage method when ERCP fails for which current guidelines recommends PTBD, especially for MHBO. This review was able to show that with today's evidence, EUS-BD is equally efficacious and possesses a better safety profile in the management of MBO and should be on the forefront of endoscopic biliary drainage. Therefore, EUS-BD could be used either as a primary or preferred salvage biliary drainage method in these cases.
    MeSH terms: Cholangiopancreatography, Endoscopic Retrograde; Cholestasis; Drainage; Neoplasms; Endosonography
  19. Wong C, Ling YS, Wee JLS, Mujahid A, Müller M
    Sci Rep, 2020 12 14;10(1):21861.
    PMID: 33318532 DOI: 10.1038/s41598-020-78873-3
    Nepenthes, as the largest family of carnivorous plants, is found with an extensive geographical distribution throughout the Malay Archipelago, specifically in Borneo, Philippines, and Sumatra. Highland species are able to tolerate cold stress and lowland species heat stress. Our current understanding on the adaptation or survival mechanisms acquired by the different Nepenthes species to their climatic conditions at the phytochemical level is, however, limited. In this study, we applied an eco-metabolomics approach to identify temperature stressed individual metabolic fingerprints of four Nepenthes species: the lowlanders N. ampullaria, N. rafflesiana and N. northiana, and the highlander N. minima. We hypothesized that distinct metabolite regulation patterns exist between the Nepenthes species due to their adaptation towards different geographical and altitudinal distribution. Our results revealed not only distinct temperature stress induced metabolite fingerprints for each Nepenthes species, but also shared metabolic response and adaptation strategies. The interspecific responses and adaptation of N. rafflesiana and N. northiana likely reflected their natural habitat niches. Moreover, our study also indicates the potential of lowlanders, especially N. ampullaria and N. rafflesiana, to produce metabolites needed to deal with increased temperatures, offering hope for the plant genus and future adaption in times of changing climate.
    MeSH terms: Acclimatization*; Chromatography, High Pressure Liquid; Species Specificity; Mass Spectrometry*; Metabolomics*
  20. Yusoff MSB
    J Taibah Univ Med Sci, 2020 Dec;15(6):439-446.
    PMID: 33318735 DOI: 10.1016/j.jtumed.2020.08.011
    Objective: This study was conducted at the end of the second year of the pre-clinical program to assess differences in psychological status of students enrolled by multiple mini interview (MMI) and personal interview (PI).

    Methods: We adopted a comparative cross-sectional study on pre-clinical medical students who appeared in two different admission tests. The stress, anxiety, and depression levels of students were measured by the depression, anxiety, stress scale (DASS-21), and their burnout level was measured by the Copenhagen Burnout Inventory.

    Results: The stress, anxiety, and depression scores between MMI and PI were not significantly different (p-value > 0.05). The personal, work and client burnout scores between MMI and PI were not significantly different (p-value > 0.05). The prevalence of stress (MMI = 39%, PI = 36.9%), anxiety (MMI = 78%, PI = 67.4%), depression (MMI = 41%, PI = 36.2%) and burnout (MMI = 29%, PI = 31.9%) between MMI and PI cohorts was not significantly different (p-value > 0.05). These results showed similar levels of stress, anxiety, depression, and burnout in students at the end of the pre-clinical phase.

    Conclusions: This study showed similar psychological health status of the pre-clinical students who were enrolled by two different admission tests. The prevalence of stress, anxiety, burnout, and depression among the pre-clinical medical students was comparable to the global prevalence. The results indicate that medical schools can consider implementing either MMI or PI to recruit suitable candidates for medical training.

    MeSH terms: Anxiety; Anxiety Disorders; Burnout, Professional; Cross-Sectional Studies; Depression; Health Status; Humans; Mental Health; Schools, Medical; Students, Medical; Prevalence
External Links